4GG2A

The crystal structure of glutamate-bound human gamma-glutamyltranspeptidase 1
Total Genus 103
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
343
structure length
343
Chain Sequence
PDNHVYTRAAVAADAKQCSKIGRDALRDGGSAVDAAIAALLCVGLMNAHSMGIGGGLFLTIYNSTTRKAEVINAREVAPRLAFATMFNSSEQSQKGGLSVAVPGEIRGYELAHQRHGRLPWARLFQPSIQLARQGFPVGKGLAAALENKRTVIEQQPVLCEVFCRDRKVLREGERLTLPQLADTYETLAIEGAQAFYNGSLTAQIVKDIQAAGGIVTAEDLNNYRAELIEHPLNISLGDVVLYMPSAPLSGPVLALILNILKGYNFSRESVESPEQKGLTYHRIVEAFRFAYAKRTLLGDPKFVDVTEVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Gamma-glutamyltranspeptidase 1 heavy chain
publication title Novel Insights into Eukaryotic gamma-Glutamyltranspeptidase 1 from the Crystal Structure of the Glutamate-bound Human Enzyme.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Hydrolase
total genus 103
structure length 343
sequence length 343
ec nomenclature ec 2.3.2.2: Gamma-glutamyltransferase.
pdb deposition date 2012-08-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.130 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4gg2A02
2DBXA 2QMCA 2DG5A 5BPKA 2Z8JA 3WHSA 2DBWA 2DBUA 2QM6A 2NQOA 2V36A 2E0YA 5B5TA 4GG2A 4ZCGA 3FNMA 2Z8KA 4ZC6A 4Z9OA 3A75A 4OTTA 2Z8IA 4OTUA 2E0XA 4ZBKA 3WHRA 3WHQA 4GDXA
chains in the Genus database with same CATH superfamily
2BXIA 3LU6A 3LU7A 1HA2A 3NMUA 2DG5A 2Z8JA 3SIVB 2I30A 2VUEA 2BXHA 2LQIA 2VDBA 4FK5B 3B9LA 2V36A 1VZSA 4DM0A 1KW2A 1E78A 1HK5A 1UORA 4F5VA 3KJLA 4BY9C 4F5SA 1FOUA 2DYMA 2LXTA 4OTUA 1NT2B 4FJCB 2AGHB 2ROHA 5IIHA 5DBYA 1GNJA 4ZBKA 5GINA 2BXOA 4F5UA 1TF0A 3WHQA 4G03A 4W4UB 2BX8A 1E7GA 2BXNA 2DBXA 1GNIA 4G04A 4HGMB 2XW0A 4LA0A 2VUFA 5BPKA 1LOTA 1JNBA 2EFHA 1MIWA 4DHXB 2BXBA 3W1SA 4G01A 2JUHA 4PO0A 2EFEA 2YDFA 4TQ1A 2BXPA 3V09A 2E0YA 1MUHA 3NVIA 3VQIA 2XSIA 3FWBC 4J2VA 2CKXA 1KXPD 2OT3A 4L8UA 5DQFA 2BXDA 5B5TA 1H9ZA 5IJFA 1E7CA 3UIVA 2BXEA 3BPJA 3JRYA 4L9KA 4ZC6A 4ZBQA 4EMXA 1J7EA 1N5UA 1BM0A 4Z9OA 3GQUA 4D7XA 3GQXA 4K2CA 2Z8IA 3V03A 1E7HA 4BKEA 2AJEA 2BXGA 3MHHB 2I2ZA 3LU8A 4IW2A 1HK2A 4M70B 3WHRA 1MA9A 2BXFA 4OT2A 4LB9A 3GA9L 2XW1A 4K71A 1AO6A 1MM8A 2QHBA 3FWCC 2QMCA 2XVUA 5GIOA 1LNSA 2LXSA 3WHSA 2DBWA 4GDLB 2DYOA 2NQOA 4S1YA 2OZBB 4FIPB 1E7AA 3NVMA 2K0NA 5IIXA 1E7BA 2KWFA 5ID9A 1MIYA 3ICXA 1IJGA 4E99A 5ID7A 2BXMA 1O9XA 1BKEA 2XMOA 3B9MA 2BXAA 4GDKB 1E7FA 1MUSA 3MHSB 4OR0A 3CX9A 2Z8KA 4C31B 1HK4A 4OTTA 2BXQA 3SQJA 4IW1A 2E0XA 4LB2A 5GIPA 1J78A 4F5TA 3PLAA 4HGKA 4Z69A 1KDXA 5D7GA 3G9KD 4N0UD 3ECPA 2EFCA 4GDXA 4NAWB 1H5WA 1E7EA 2EFDA 2XVQA 1HK1A 4N3ZA 4JK4A 5IFOA 3V08A 3A73A 4LUFA 2BXLA 2KBZA 3H37A 4TQ0A 2DBUA 2QM6A 1HK3A 5IJEA 4I9OA 3NVKA 1MIVA 4N0FD 2NNWA 5FUOA 1TXUA 2BXCA 4MBEC 3H3AA 1VFIA 3M99C 3TDLA 2GUTA 4LUHA 4GG2A 5HOZA 3JQZA 2XVVA 4ZCGA 5GHKA 1E7IA 3FNMA 5IIUA 2LQHA 3A75A 2XVWA 1SB0A 4WA6B 5IJ5A 4L9QA 4ZUXV 3SIUB 4ZBRA 3KIKA 2BXKA 1BJ5A 2LOQA
chains in the Genus database with same CATH topology
2BXIA 3LU6A 3LU7A 1HA2A 3NMUA 2DG5A 2Z8JA 3SIVB 2I30A 2VUEA 2BXHA 2VDBA 4FK5B 3B9LA 2V36A 1VZSA 1KW2A 1E78A 1HK5A 1UORA 4F5VA 3KJLA 4BY9C 4F5SA 1FOUA 2DYMA 4OTUA 1NT2B 4FJCB 2ROHA 5IIHA 5DBYA 1GNJA 4ZBKA 5GINA 2BXOA 4F5UA 1TF0A 3WHQA 4G03A 4W4UB 2BX8A 1E7GA 2BXNA 2DBXA 1GNIA 4G04A 4HGMB 2XW0A 4LA0A 2VUFA 5BPKA 1LOTA 1JNBA 2EFHA 1MIWA 4DHXB 2BXBA 3W1SA 4G01A 2JUHA 4PO0A 2EFEA 2YDFA 4TQ1A 2BXPA 3V09A 2E0YA 3NVIA 3VQIA 2XSIA 3FWBC 4J2VA 2CKXA 1KXPD 2OT3A 4L8UA 5DQFA 2BXDA 5B5TA 1H9ZA 5IJFA 1E7CA 3UIVA 2BXEA 3JRYA 4L9KA 4EMXA 4ZC6A 4ZBQA 1J7EA 1N5UA 1BM0A 4Z9OA 3GQUA 3GQXA 4K2CA 2Z8IA 3V03A 1E7HA 4BKEA 2AJEA 2BXGA 3MHHB 2I2ZA 3LU8A 4IW2A 1HK2A 4M70B 3WHRA 1MA9A 2BXFA 4OT2A 4LB9A 3GA9L 2XW1A 4K71A 1AO6A 2QHBA 3FWCC 2QMCA 2XVUA 5GIOA 1LNSA 3WHSA 2DBWA 4GDLB 2DYOA 2NQOA 4S1YA 2OZBB 4FIPB 1E7AA 3NVMA 5IIXA 1E7BA 5ID9A 1MIYA 3ICXA 1IJGA 4E99A 5ID7A 2BXMA 1O9XA 1BKEA 2XMOA 3B9MA 2BXAA 4GDKB 1E7FA 3MHSB 4OR0A 3CX9A 2Z8KA 4C31B 1HK4A 4OTTA 2BXQA 3SQJA 4IW1A 2E0XA 4LB2A 5GIPA 1J78A 4F5TA 3PLAA 4HGKA 4Z69A 5D7GA 3G9KD 4N0UD 2EFCA 4GDXA 4NAWB 1H5WA 1E7EA 2EFDA 2XVQA 1HK1A 4N3ZA 4JK4A 5IFOA 3V08A 3A73A 4LUFA 2BXLA 2KBZA 3H37A 4TQ0A 2DBUA 2QM6A 1HK3A 5IJEA 3NVKA 1MIVA 4N0FD 2NNWA 5FUOA 1TXUA 2BXCA 4MBEC 3H3AA 1VFIA 3M99C 3TDLA 4LUHA 4GG2A 5HOZA 3JQZA 2XVVA 4ZCGA 5GHKA 1E7IA 3FNMA 5IIUA 3A75A 2XVWA 4WA6B 5IJ5A 4L9QA 4ZUXV 3SIUB 4ZBRA 3KIKA 2BXKA 1BJ5A 2LOQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DBX A;  2QMC A;  2DG5 A;  5BPK A;  2Z8J A;  3WHS A;  2DBW A;  2DBU A;  2QM6 A;  2NQO A;  2V36 A;  2E0Y A;  5B5T A;  4GG2 A;  4ZCG A;  3FNM A;  2Z8K A;  4ZC6 A;  4Z9O A;  3A75 A;  4OTT A;  2Z8I A;  4OTU A;  2E0X A;  4ZBK A;  3WHR A;  3WHQ A;  4GDX A; 
#chains in the Genus database with same CATH topology
 2BXI A;  3LU6 A;  3LU7 A;  1HA2 A;  3NMU A;  2DG5 A;  2Z8J A;  3SIV B;  2I30 A;  2VUE A;  2BXH A;  2LQI A;  2VDB A;  4FK5 B;  3B9L A;  2V36 A;  1VZS A;  4DM0 A;  1KW2 A;  1E78 A;  1HK5 A;  1UOR A;  4F5V A;  3KJL A;  4BY9 C;  4F5S A;  1FOU A;  2DYM A;  2LXT A;  4OTU A;  1NT2 B;  4FJC B;  2AGH B;  2ROH A;  5IIH A;  5DBY A;  1GNJ A;  4ZBK A;  5GIN A;  2BXO A;  4F5U A;  1TF0 A;  3WHQ A;  4G03 A;  4W4U B;  2BX8 A;  1E7G A;  2BXN A;  2DBX A;  1GNI A;  4G04 A;  4HGM B;  2XW0 A;  4LA0 A;  2VUF A;  5BPK A;  1LOT A;  1JNB A;  2EFH A;  1MIW A;  4DHX B;  2BXB A;  3W1S A;  4G01 A;  2JUH A;  4PO0 A;  2EFE A;  2YDF A;  4TQ1 A;  2BXP A;  3V09 A;  2E0Y A;  1MUH A;  3NVI A;  3VQI A;  2XSI A;  3FWB C;  4J2V A;  2CKX A;  1KXP D;  2OT3 A;  4L8U A;  5DQF A;  2BXD A;  5B5T A;  1H9Z A;  5IJF A;  1E7C A;  3UIV A;  2BXE A;  3BPJ A;  3JRY A;  4L9K A;  4ZC6 A;  4ZBQ A;  4EMX A;  1J7E A;  1N5U A;  1BM0 A;  4Z9O A;  3GQU A;  4D7X A;  3GQX A;  4K2C A;  2Z8I A;  3V03 A;  1E7H A;  4BKE A;  2AJE A;  2BXG A;  3MHH B;  2I2Z A;  3LU8 A;  4IW2 A;  1HK2 A;  4M70 B;  3WHR A;  1MA9 A;  2BXF A;  4OT2 A;  4LB9 A;  3GA9 L;  2XW1 A;  4K71 A;  1AO6 A;  1MM8 A;  2QHB A;  3FWC C;  2QMC A;  2XVU A;  5GIO A;  1LNS A;  2LXS A;  3WHS A;  2DBW A;  4GDL B;  2DYO A;  2NQO A;  4S1Y A;  2OZB B;  4FIP B;  1E7A A;  3NVM A;  2K0N A;  5IIX A;  1E7B A;  2KWF A;  5ID9 A;  1MIY A;  3ICX A;  1IJG A;  4E99 A;  5ID7 A;  2BXM A;  1O9X A;  1BKE A;  2XMO A;  3B9M A;  2BXA A;  4GDK B;  1E7F A;  1MUS A;  3MHS B;  4OR0 A;  3CX9 A;  2Z8K A;  4C31 B;  1HK4 A;  4OTT A;  2BXQ A;  3SQJ A;  4IW1 A;  2E0X A;  4LB2 A;  5GIP A;  1J78 A;  4F5T A;  3PLA A;  4HGK A;  4Z69 A;  1KDX A;  5D7G A;  3G9K D;  4N0U D;  3ECP A;  2EFC A;  4GDX A;  4NAW B;  1H5W A;  1E7E A;  2EFD A;  2XVQ A;  1HK1 A;  4N3Z A;  4JK4 A;  5IFO A;  3V08 A;  3A73 A;  4LUF A;  2BXL A;  2KBZ A;  3H37 A;  4TQ0 A;  2DBU A;  2QM6 A;  1HK3 A;  5IJE A;  4I9O A;  3NVK A;  1MIV A;  4N0F D;  2NNW A;  5FUO A;  1TXU A;  2BXC A;  4MBE C;  3H3A A;  1VFI A;  3M99 C;  3TDL A;  2GUT A;  4LUH A;  4GG2 A;  5HOZ A;  3JQZ A;  2XVV A;  4ZCG A;  5GHK A;  1E7I A;  3FNM A;  5IIU A;  2LQH A;  3A75 A;  2XVW A;  1SB0 A;  4WA6 B;  5IJ5 A;  4L9Q A;  4ZUX V;  3SIU B;  4ZBR A;  3KIK A;  2BXK A;  1BJ5 A;  2LOQ A; 
#chains in the Genus database with same CATH homology
 2BXI A;  3LU6 A;  3LU7 A;  1HA2 A;  3NMU A;  2DG5 A;  2Z8J A;  3SIV B;  2I30 A;  2VUE A;  2BXH A;  2VDB A;  4FK5 B;  3B9L A;  2V36 A;  1VZS A;  1KW2 A;  1E78 A;  1HK5 A;  1UOR A;  4F5V A;  3KJL A;  4BY9 C;  4F5S A;  1FOU A;  2DYM A;  4OTU A;  1NT2 B;  4FJC B;  2ROH A;  5IIH A;  5DBY A;  1GNJ A;  4ZBK A;  5GIN A;  2BXO A;  4F5U A;  1TF0 A;  3WHQ A;  4G03 A;  4W4U B;  2BX8 A;  1E7G A;  2BXN A;  2DBX A;  1GNI A;  4G04 A;  4HGM B;  2XW0 A;  4LA0 A;  2VUF A;  5BPK A;  1LOT A;  1JNB A;  2EFH A;  1MIW A;  4DHX B;  2BXB A;  3W1S A;  4G01 A;  2JUH A;  4PO0 A;  2EFE A;  2YDF A;  4TQ1 A;  2BXP A;  3V09 A;  2E0Y A;  3NVI A;  3VQI A;  2XSI A;  3FWB C;  4J2V A;  2CKX A;  1KXP D;  2OT3 A;  4L8U A;  5DQF A;  2BXD A;  5B5T A;  1H9Z A;  5IJF A;  1E7C A;  3UIV A;  2BXE A;  3JRY A;  4L9K A;  4EMX A;  4ZC6 A;  4ZBQ A;  1J7E A;  1N5U A;  1BM0 A;  4Z9O A;  3GQU A;  3GQX A;  4K2C A;  2Z8I A;  3V03 A;  1E7H A;  4BKE A;  2AJE A;  2BXG A;  3MHH B;  2I2Z A;  3LU8 A;  4IW2 A;  1HK2 A;  4M70 B;  3WHR A;  1MA9 A;  2BXF A;  4OT2 A;  4LB9 A;  3GA9 L;  2XW1 A;  4K71 A;  1AO6 A;  2QHB A;  3FWC C;  2QMC A;  2XVU A;  5GIO A;  1LNS A;  3WHS A;  2DBW A;  4GDL B;  2DYO A;  2NQO A;  4S1Y A;  2OZB B;  4FIP B;  1E7A A;  3NVM A;  5IIX A;  1E7B A;  5ID9 A;  1MIY A;  3ICX A;  1IJG A;  4E99 A;  5ID7 A;  2BXM A;  1O9X A;  1BKE A;  2XMO A;  3B9M A;  2BXA A;  4GDK B;  1E7F A;  3MHS B;  4OR0 A;  3CX9 A;  2Z8K A;  4C31 B;  1HK4 A;  4OTT A;  2BXQ A;  3SQJ A;  4IW1 A;  2E0X A;  4LB2 A;  5GIP A;  1J78 A;  4F5T A;  3PLA A;  4HGK A;  4Z69 A;  5D7G A;  3G9K D;  4N0U D;  2EFC A;  4GDX A;  4NAW B;  1H5W A;  1E7E A;  2EFD A;  2XVQ A;  1HK1 A;  4N3Z A;  4JK4 A;  5IFO A;  3V08 A;  3A73 A;  4LUF A;  2BXL A;  2KBZ A;  3H37 A;  4TQ0 A;  2DBU A;  2QM6 A;  1HK3 A;  5IJE A;  3NVK A;  1MIV A;  4N0F D;  2NNW A;  5FUO A;  1TXU A;  2BXC A;  4MBE C;  3H3A A;  1VFI A;  3M99 C;  3TDL A;  4LUH A;  4GG2 A;  5HOZ A;  3JQZ A;  2XVV A;  4ZCG A;  5GHK A;  1E7I A;  3FNM A;  5IIU A;  3A75 A;  2XVW A;  4WA6 B;  5IJ5 A;  4L9Q A;  4ZUX V;  3SIU B;  4ZBR A;  3KIK A;  2BXK A;  1BJ5 A;  2LOQ A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...