1E7AA

Crystal structure of human serum albumin complexed with the general anesthetic propofol
Total Genus 212

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
212
sequence length
578
structure length
578
Chain Sequence
SEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Carrier protein
source organism Homo sapiens
publication title Binding of the General Anesthetics Propofol and Halothane to Human Serum Albumin. High Resolution Crystal Structures
pubmed doi rcsb
molecule keywords SERUM ALBUMIN
total genus 212
structure length 578
sequence length 578
chains with identical sequence B
ec nomenclature
pdb deposition date 2000-08-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1e7aA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1e7aA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1e7aA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1e7aA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1e7aA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1e7aA05
1HK2A 4K2CA 5DBYA 3A73A 4N0FD 4JK4A 2BXFA 2XVWA 4J2VA 2BXHA 4OT2A 3B9LA 2BXIA 4BKEA 2XVUA 3B9MA 2VUFA 2XW0A 5IJEA 1AO6A 5IFOA 1HK5A 4L9KA 2BXQA 2VDBA 4HGMB 4PO0A 4IW2A 3TDLA 2BXNA 4N0UD 4EMXA 1E78A 1TF0A 1HA2A 5IJFA 1UORA 3V03A 1J7EA 4F5TA 5IIUA 2BXCA 4G04A 2BX8A 4HGKA 2BXAA 2XW1A 5DQFA 1GNJA 2BXBA 2BXMA 1HK4A 3V08A 1HK3A 1BM0A 2I30A 1GNIA 4LA0A 3JRYA 1BKEA 4L9QA 3SQJA 5ID7A 4S1YA 4G03A 2BXEA 5FUOA 1MA9A 2XSIA 5GHKA 2BXKA 4LB9A 3UIVA 5IIHA 2BXDA 2YDFA 4LUHA 4OR0A 4F5SA 4F5UA 1E7GA 1KW2A 3LU8A 1E7HA 4IW1A 5HOZA 4L8UA 2BXOA 1BJ5A 1E7IA 1E7AA 2BXLA 1HK1A 4Z69A 3V09A 5IIXA 1E7BA 2XVVA 4E99A 3LU7A 4K71A 1H9ZA 3CX9A 5ID9A 1KXPD 5IJ5A 2VUEA 2XVQA 4LB2A 4ZBRA 1E7EA 1LOTA 2BXPA 4F5VA 1E7CA 1N5UA 4ZBQA 1J78A 2BXGA 4LUFA 1E7FA 3JQZA 2I2ZA 3LU6A 1O9XA
chains in the Genus database with same CATH superfamily
1HK2A 3NVMA 4K2CA 5D7GA 5DBYA 4TQ0A 2K0NA 3A73A 2NNWA 1LNSA 4N0FD 4JK4A 2BXFA 4ZC6A 2XVWA 2AJEA 4J2VA 2KWFA 1MIWA 3MHSB 4D7XA 2BXHA 4OT2A 3B9LA 2BXIA 4BKEA 2XVUA 3B9MA 3FWCC 3GA9L 2VUFA 2XW0A 2LXTA 5IJEA 1AO6A 3PLAA 2QHBA 2CKXA 2DBUA 3KIKA 5IFOA 3GQUA 1HK5A 3H37A 4L9KA 2BXQA 2Z8IA 2VDBA 2LQHA 4GDKB 1H5WA 4HGMB 4PO0A 4IW2A 4C31B 4DHXB 3TDLA 2OT3A 2EFDA 2BXNA 4M70B 4N0UD 1E78A 3GQXA 4EMXA 1TF0A 1HA2A 5IJFA 1UORA 3V03A 2LQIA 1J7EA 2DBXA 2DBWA 3VQIA 4BY9C 2E0XA 4F5TA 5IIUA 1VFIA 2BXCA 4G04A 2BX8A 3FWBC 4HGKA 4ZUXV 2BXAA 2XW1A 2LOQA 5DQFA 1GNJA 2KBZA 4G01A 1MIYA 2BXBA 3SIVB 2EFEA 2BXMA 2DYMA 1HK4A 3V08A 1HK3A 3A75A 1BM0A 2I30A 1GNIA 2ROHA 4WA6B 4LA0A 1MM8A 3NVIA 3JRYA 1BKEA 4L9QA 4W4UB 3G9KD 3SQJA 2V36A 4S1YA 5ID7A 4G03A 5GIPA 5GINA 2BXEA 5FUOA 3FNMA 4ZCGA 4OTUA 4ZBKA 1MA9A 2XSIA 5GHKA 3WHRA 2BXKA 4LB9A 3UIVA 1TXUA 5IIHA 1NT2B 1IJGA 5BPKA 2BXDA 4N3ZA 2YDFA 3ICXA 2DYOA 4LUHA 4OR0A 4F5SA 4F5UA 1E7GA 3H3AA 1KW2A 2OZBB 2EFCA 1MUHA 3LU8A 4GDLB 4FIPB 4NAWB 2JUHA 3NVKA 1E7HA 4IW1A 1MIVA 3WHQA 2QMCA 3MHHB 5HOZA 3BPJA 4OTTA 2LXSA 4TQ1A 4L8UA 2BXOA 1BJ5A 1E7IA 1E7AA 3SIUB 1E7FA 3KJLA 4FK5B 2BXLA 1HK1A 1JNBA 2Z8JA 2GUTA 4Z69A 5B5TA 1KDXA 2E0YA 3V09A 2NQOA 5IIXA 1E7BA 4I9OA 2XVVA 1VZSA 2XMOA 3WHSA 4E99A 2AGHB 4Z9OA 3LU7A 4GG2A 4K71A 1H9ZA 3CX9A 5ID9A 4FJCB 1KXPD 1SB0A 3ECPA 2EFHA 5IJ5A 2VUEA 2XVQA 2QM6A 1MUSA 4LB2A 4MBEC 4ZBRA 3W1SA 1E7EA 1LOTA 5GIOA 2BXPA 4DM0A 4F5VA 2Z8KA 1E7CA 1N5UA 4ZBQA 2DG5A 3NMUA 1J78A 2BXGA 4LUFA 3M99C 4GDXA 1FOUA 3JQZA 2I2ZA 3LU6A 1O9XA
chains in the Genus database with same CATH topology
1HK2A 3NVMA 4K2CA 5D7GA 5DBYA 4TQ0A 3A73A 2NNWA 1LNSA 4N0FD 4JK4A 2BXFA 4ZC6A 2XVWA 2AJEA 4J2VA 1MIWA 3MHSB 2BXHA 4OT2A 3B9LA 2BXIA 4BKEA 2XVUA 3B9MA 3FWCC 3GA9L 2VUFA 2XW0A 5IJEA 1AO6A 3PLAA 2QHBA 2CKXA 2DBUA 3KIKA 5IFOA 3GQUA 1HK5A 3H37A 4L9KA 2BXQA 2Z8IA 2VDBA 4GDKB 4DHXB 1H5WA 4HGMB 4PO0A 4IW2A 4C31B 3TDLA 2OT3A 2EFDA 2BXNA 4M70B 4N0UD 1E78A 3GQXA 4EMXA 1TF0A 1HA2A 5IJFA 1UORA 3V03A 1J7EA 2DBXA 2DBWA 3VQIA 4BY9C 2E0XA 4F5TA 5IIUA 1VFIA 2BXCA 4G04A 2BX8A 3FWBC 4HGKA 4ZUXV 2BXAA 2XW1A 2LOQA 5DQFA 1GNJA 2KBZA 4G01A 1MIYA 2BXBA 3SIVB 2EFEA 2BXMA 2DYMA 1HK4A 3V08A 1HK3A 3A75A 1BM0A 2I30A 1GNIA 2ROHA 4WA6B 4LA0A 3NVIA 3JRYA 1BKEA 4L9QA 4W4UB 3G9KD 3SQJA 2V36A 4S1YA 5ID7A 4G03A 5GIPA 5GINA 2BXEA 5FUOA 3FNMA 4ZCGA 4OTUA 4ZBKA 1MA9A 2XSIA 5GHKA 3WHRA 2BXKA 4LB9A 3UIVA 1TXUA 5IIHA 1NT2B 1IJGA 5BPKA 2BXDA 4N3ZA 2YDFA 3ICXA 2DYOA 4LUHA 4OR0A 4F5SA 4F5UA 1E7GA 3H3AA 1KW2A 2OZBB 2EFCA 3LU8A 4GDLB 4FIPB 4NAWB 2JUHA 3NVKA 1E7HA 4IW1A 1MIVA 3WHQA 2QMCA 3MHHB 5HOZA 4OTTA 4TQ1A 4L8UA 2BXOA 1BJ5A 1E7IA 1E7AA 3SIUB 1E7FA 3KJLA 4FK5B 2BXLA 1HK1A 1JNBA 2Z8JA 4Z69A 5B5TA 2E0YA 3V09A 2NQOA 5IIXA 1E7BA 2XVVA 1VZSA 2XMOA 3WHSA 4E99A 4Z9OA 3LU7A 4GG2A 4K71A 1H9ZA 3CX9A 5ID9A 4FJCB 1KXPD 2EFHA 5IJ5A 2VUEA 2XVQA 2QM6A 4LB2A 4MBEC 4ZBRA 3W1SA 1E7EA 1LOTA 5GIOA 2BXPA 4F5VA 2Z8KA 1E7CA 1N5UA 4ZBQA 2DG5A 3NMUA 1J78A 2BXGA 4LUFA 3M99C 4GDXA 1FOUA 3JQZA 2I2ZA 3LU6A 1O9XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HK2 A;  4K2C A;  5DBY A;  3A73 A;  4N0F D;  4JK4 A;  2BXF A;  2XVW A;  4J2V A;  2BXH A;  4OT2 A;  3B9L A;  2BXI A;  4BKE A;  2XVU A;  3B9M A;  2VUF A;  2XW0 A;  5IJE A;  1AO6 A;  5IFO A;  1HK5 A;  4L9K A;  2BXQ A;  2VDB A;  4HGM B;  4PO0 A;  4IW2 A;  3TDL A;  2BXN A;  4N0U D;  4EMX A;  1E78 A;  1TF0 A;  1HA2 A;  5IJF A;  1UOR A;  3V03 A;  1J7E A;  4F5T A;  5IIU A;  2BXC A;  4G04 A;  2BX8 A;  4HGK A;  2BXA A;  2XW1 A;  5DQF A;  1GNJ A;  2BXB A;  2BXM A;  1HK4 A;  3V08 A;  1HK3 A;  1BM0 A;  2I30 A;  1GNI A;  4LA0 A;  3JRY A;  1BKE A;  4L9Q A;  3SQJ A;  5ID7 A;  4S1Y A;  4G03 A;  2BXE A;  5FUO A;  1MA9 A;  2XSI A;  5GHK A;  2BXK A;  4LB9 A;  3UIV A;  5IIH A;  2BXD A;  2YDF A;  4LUH A;  4OR0 A;  4F5S A;  4F5U A;  1E7G A;  1KW2 A;  3LU8 A;  1E7H A;  4IW1 A;  5HOZ A;  4L8U A;  2BXO A;  1BJ5 A;  1E7I A;  1E7A A;  2BXL A;  1HK1 A;  4Z69 A;  3V09 A;  5IIX A;  1E7B A;  2XVV A;  4E99 A;  3LU7 A;  4K71 A;  1H9Z A;  3CX9 A;  5ID9 A;  1KXP D;  5IJ5 A;  2VUE A;  2XVQ A;  4LB2 A;  4ZBR A;  1E7E A;  1LOT A;  2BXP A;  4F5V A;  1E7C A;  1N5U A;  4ZBQ A;  1J78 A;  2BXG A;  4LUF A;  1E7F A;  3JQZ A;  2I2Z A;  3LU6 A;  1O9X A; 
#chains in the Genus database with same CATH topology
 1HK2 A;  3NVM A;  4K2C A;  5D7G A;  5DBY A;  4TQ0 A;  2K0N A;  3A73 A;  2NNW A;  1LNS A;  4N0F D;  4JK4 A;  2BXF A;  4ZC6 A;  2XVW A;  2AJE A;  4J2V A;  2KWF A;  1MIW A;  3MHS B;  4D7X A;  2BXH A;  4OT2 A;  3B9L A;  2BXI A;  4BKE A;  2XVU A;  3B9M A;  3FWC C;  3GA9 L;  2VUF A;  2XW0 A;  2LXT A;  5IJE A;  1AO6 A;  3PLA A;  2QHB A;  2CKX A;  2DBU A;  3KIK A;  5IFO A;  3GQU A;  1HK5 A;  3H37 A;  4L9K A;  2BXQ A;  2Z8I A;  2VDB A;  2LQH A;  4GDK B;  1H5W A;  4HGM B;  4PO0 A;  4IW2 A;  4C31 B;  4DHX B;  3TDL A;  2OT3 A;  2EFD A;  2BXN A;  4M70 B;  4N0U D;  1E78 A;  3GQX A;  4EMX A;  1TF0 A;  1HA2 A;  5IJF A;  1UOR A;  3V03 A;  2LQI A;  1J7E A;  2DBX A;  2DBW A;  3VQI A;  4BY9 C;  2E0X A;  4F5T A;  5IIU A;  1VFI A;  2BXC A;  4G04 A;  2BX8 A;  3FWB C;  4HGK A;  4ZUX V;  2BXA A;  2XW1 A;  2LOQ A;  5DQF A;  1GNJ A;  2KBZ A;  4G01 A;  1MIY A;  2BXB A;  3SIV B;  2EFE A;  2BXM A;  2DYM A;  1HK4 A;  3V08 A;  1HK3 A;  3A75 A;  1BM0 A;  2I30 A;  1GNI A;  2ROH A;  4WA6 B;  4LA0 A;  1MM8 A;  3NVI A;  3JRY A;  1BKE A;  4L9Q A;  4W4U B;  3G9K D;  3SQJ A;  2V36 A;  4S1Y A;  5ID7 A;  4G03 A;  5GIP A;  5GIN A;  2BXE A;  5FUO A;  3FNM A;  4ZCG A;  4OTU A;  4ZBK A;  1MA9 A;  2XSI A;  5GHK A;  3WHR A;  2BXK A;  4LB9 A;  3UIV A;  1TXU A;  5IIH A;  1NT2 B;  1IJG A;  5BPK A;  2BXD A;  4N3Z A;  2YDF A;  3ICX A;  2DYO A;  4LUH A;  4OR0 A;  4F5S A;  4F5U A;  1E7G A;  3H3A A;  1KW2 A;  2OZB B;  2EFC A;  1MUH A;  3LU8 A;  4GDL B;  4FIP B;  4NAW B;  2JUH A;  3NVK A;  1E7H A;  4IW1 A;  1MIV A;  3WHQ A;  2QMC A;  3MHH B;  5HOZ A;  3BPJ A;  4OTT A;  2LXS A;  4TQ1 A;  4L8U A;  2BXO A;  1BJ5 A;  1E7I A;  1E7A A;  3SIU B;  1E7F A;  3KJL A;  4FK5 B;  2BXL A;  1HK1 A;  1JNB A;  2Z8J A;  2GUT A;  4Z69 A;  5B5T A;  1KDX A;  2E0Y A;  3V09 A;  2NQO A;  5IIX A;  1E7B A;  4I9O A;  2XVV A;  1VZS A;  2XMO A;  3WHS A;  4E99 A;  2AGH B;  4Z9O A;  3LU7 A;  4GG2 A;  4K71 A;  1H9Z A;  3CX9 A;  5ID9 A;  4FJC B;  1KXP D;  1SB0 A;  3ECP A;  2EFH A;  5IJ5 A;  2VUE A;  2XVQ A;  2QM6 A;  1MUS A;  4LB2 A;  4MBE C;  4ZBR A;  3W1S A;  1E7E A;  1LOT A;  5GIO A;  2BXP A;  4DM0 A;  4F5V A;  2Z8K A;  1E7C A;  1N5U A;  4ZBQ A;  2DG5 A;  3NMU A;  1J78 A;  2BXG A;  4LUF A;  3M99 C;  4GDX A;  1FOU A;  3JQZ A;  2I2Z A;  3LU6 A;  1O9X A; 
#chains in the Genus database with same CATH homology
 1HK2 A;  3NVM A;  4K2C A;  5D7G A;  5DBY A;  4TQ0 A;  3A73 A;  2NNW A;  1LNS A;  4N0F D;  4JK4 A;  2BXF A;  4ZC6 A;  2XVW A;  2AJE A;  4J2V A;  1MIW A;  3MHS B;  2BXH A;  4OT2 A;  3B9L A;  2BXI A;  4BKE A;  2XVU A;  3B9M A;  3FWC C;  3GA9 L;  2VUF A;  2XW0 A;  5IJE A;  1AO6 A;  3PLA A;  2QHB A;  2CKX A;  2DBU A;  3KIK A;  5IFO A;  3GQU A;  1HK5 A;  3H37 A;  4L9K A;  2BXQ A;  2Z8I A;  2VDB A;  4GDK B;  4DHX B;  1H5W A;  4HGM B;  4PO0 A;  4IW2 A;  4C31 B;  3TDL A;  2OT3 A;  2EFD A;  2BXN A;  4M70 B;  4N0U D;  1E78 A;  3GQX A;  4EMX A;  1TF0 A;  1HA2 A;  5IJF A;  1UOR A;  3V03 A;  1J7E A;  2DBX A;  2DBW A;  3VQI A;  4BY9 C;  2E0X A;  4F5T A;  5IIU A;  1VFI A;  2BXC A;  4G04 A;  2BX8 A;  3FWB C;  4HGK A;  4ZUX V;  2BXA A;  2XW1 A;  2LOQ A;  5DQF A;  1GNJ A;  2KBZ A;  4G01 A;  1MIY A;  2BXB A;  3SIV B;  2EFE A;  2BXM A;  2DYM A;  1HK4 A;  3V08 A;  1HK3 A;  3A75 A;  1BM0 A;  2I30 A;  1GNI A;  2ROH A;  4WA6 B;  4LA0 A;  3NVI A;  3JRY A;  1BKE A;  4L9Q A;  4W4U B;  3G9K D;  3SQJ A;  2V36 A;  4S1Y A;  5ID7 A;  4G03 A;  5GIP A;  5GIN A;  2BXE A;  5FUO A;  3FNM A;  4ZCG A;  4OTU A;  4ZBK A;  1MA9 A;  2XSI A;  5GHK A;  3WHR A;  2BXK A;  4LB9 A;  3UIV A;  1TXU A;  5IIH A;  1NT2 B;  1IJG A;  5BPK A;  2BXD A;  4N3Z A;  2YDF A;  3ICX A;  2DYO A;  4LUH A;  4OR0 A;  4F5S A;  4F5U A;  1E7G A;  3H3A A;  1KW2 A;  2OZB B;  2EFC A;  3LU8 A;  4GDL B;  4FIP B;  4NAW B;  2JUH A;  3NVK A;  1E7H A;  4IW1 A;  1MIV A;  3WHQ A;  2QMC A;  3MHH B;  5HOZ A;  4OTT A;  4TQ1 A;  4L8U A;  2BXO A;  1BJ5 A;  1E7I A;  1E7A A;  3SIU B;  1E7F A;  3KJL A;  4FK5 B;  2BXL A;  1HK1 A;  1JNB A;  2Z8J A;  4Z69 A;  5B5T A;  2E0Y A;  3V09 A;  2NQO A;  5IIX A;  1E7B A;  2XVV A;  1VZS A;  2XMO A;  3WHS A;  4E99 A;  4Z9O A;  3LU7 A;  4GG2 A;  4K71 A;  1H9Z A;  3CX9 A;  5ID9 A;  4FJC B;  1KXP D;  2EFH A;  5IJ5 A;  2VUE A;  2XVQ A;  2QM6 A;  4LB2 A;  4MBE C;  4ZBR A;  3W1S A;  1E7E A;  1LOT A;  5GIO A;  2BXP A;  4F5V A;  2Z8K A;  1E7C A;  1N5U A;  4ZBQ A;  2DG5 A;  3NMU A;  1J78 A;  2BXG A;  4LUF A;  3M99 C;  4GDX A;  1FOU A;  3JQZ A;  2I2Z A;  3LU6 A;  1O9X A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.