1UORA

X-ray study of recombinant human serum albumin. phases determined by molecular replacement method, using low resolution structure model of tetragonal form of human serum albumin
Total Genus 132

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
132
sequence length
580
structure length
580
Chain Sequence
KSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAAL
100200300400500500400300200100
020406080100120Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal binding protein
source organism Homo sapiens
publication title Atomic structure and chemistry of human serum albumin.
pubmed doi rcsb
molecule keywords SERUM ALBUMIN
total genus 132
structure length 580
sequence length 580
ec nomenclature
pdb deposition date 1998-03-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1uorA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1uorA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1uorA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1uorA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1uorA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 1uorA05
4LB2A 3A73A 1HK4A 4F5VA 2YDFA 4F5TA 1HK1A 2XW0A 1BM0A 1GNIA 4LA0A 4OT2A 2XVWA 4K71A 4E99A 4F5SA 1TF0A 5IFOA 4S1YA 2BXLA 5IIHA 3JQZA 1N5UA 4EMXA 2BXEA 5FUOA 1HK5A 2BXGA 1BKEA 2BXPA 2XSIA 4LB9A 3V09A 2BXFA 2BXNA 4L9QA 5DBYA 2BXHA 3CX9A 4K2CA 2BX8A 5IIUA 3V03A 1LOTA 1UORA 1GNJA 5ID7A 1MA9A 5GHKA 4JK4A 2BXMA 4Z69A 2VDBA 2BXCA 3LU8A 3V08A 4IW2A 1E7AA 3SQJA 2BXIA 4L8UA 4L9KA 3LU6A 4LUFA 4IW1A 4F5UA 2BXQA 4BKEA 4ZBQA 1E7IA 2XVUA 3TDLA 1AO6A 4PO0A 1E7HA 2BXDA 3JRYA 5HOZA 1E7FA 3LU7A 4J2VA 1E7CA 2BXBA 2XVQA 4N0FD 1KXPD 3B9LA 1E7BA 5DQFA 4HGMB 5IJ5A 1HK2A 1E78A 4G03A 4ZBRA 5IJEA 2I2ZA 1E7GA 1E7EA 1J7EA 4N0UD 4LUHA 5IIXA 2BXOA 5IJFA 1KW2A 2I30A 1O9XA 2VUEA 2XW1A 1HK3A 1J78A 3UIVA 5ID9A 2BXKA 3B9MA 4OR0A 1BJ5A 4HGKA 1H9ZA 1HA2A 2VUFA 2XVVA 2BXAA 4G04A
chains in the Genus database with same CATH superfamily
3NVIA 4LB2A 2EFCA 2DBXA 3A73A 1HK4A 4F5VA 2E0XA 2YDFA 4F5TA 4ZUXV 2NQOA 3NMUA 1HK1A 2XW0A 1H5WA 1BM0A 1GNIA 2AJEA 3NVMA 4LA0A 2XVWA 4K71A 2QMCA 4OT2A 3SIUB 4E99A 3W1SA 4F5SA 1TF0A 3WHSA 5IFOA 1MM8A 4S1YA 2BXLA 2NNWA 2GUTA 4GDKB 3JQZA 5IIHA 2OZBB 1N5UA 4EMXA 2BXEA 2E0YA 5FUOA 1MUHA 1HK5A 2DBUA 4OTUA 4DM0A 2BXGA 1BKEA 2BXPA 1VFIA 3H3AA 2XSIA 4LB9A 3PLAA 3V09A 3ICXA 4FJCB 3KJLA 2BXFA 2BXNA 4L9QA 1IJGA 1LNSA 5DBYA 2QHBA 2BXHA 3ECPA 3CX9A 3BPJA 4K2CA 2BX8A 5IIUA 5D7GA 3V03A 1LOTA 5GIOA 2EFDA 1UORA 4FK5B 1GNJA 5ID7A 5BPKA 1MA9A 5GINA 5GHKA 4JK4A 4GDXA 2BXMA 4Z69A 3GQXA 2VDBA 4DHXB 4WA6B 2BXCA 3FWCC 3LU8A 3M99C 3V08A 4D7XA 4Z9OA 4IW2A 4N3ZA 1E7AA 5B5TA 1MIVA 3SQJA 3H37A 2BXIA 4L8UA 3WHRA 2Z8IA 3GQUA 4L9KA 3LU6A 2AGHB 2XMOA 4LUFA 5GIPA 1TXUA 4IW1A 4F5UA 4FIPB 4ZBKA 2BXQA 1VZSA 4BKEA 1MIWA 1E7IA 2LXTA 2XVUA 2V36A 4ZBQA 3TDLA 4TQ0A 4PO0A 1AO6A 3SIVB 4NAWB 1MIYA 2Z8KA 4I9OA 1E7HA 3MHSB 2BXDA 4GDLB 3JRYA 2CKXA 5HOZA 1E7FA 3LU7A 4J2VA 1E7CA 2BXBA 2XVQA 4N0FD 1KXPD 3B9LA 3NVKA 1E7BA 4C31B 2LQHA 3GA9L 4GG2A 2LXSA 3VQIA 5DQFA 4HGMB 4OTTA 5IJ5A 1MUSA 2K0NA 1HK2A 1E78A 4G03A 4ZBRA 5IJEA 2I2ZA 1E7GA 1FOUA 1E7EA 4MBEC 2Z8JA 1SB0A 4ZC6A 2DYMA 4TQ1A 4W4UB 1J7EA 3MHHB 4N0UD 4LUHA 4G01A 2BXOA 4ZCGA 1JNBA 2JUHA 5IIXA 5IJFA 1KW2A 2DBWA 2I30A 1O9XA 2VUEA 2XW1A 2QM6A 1HK3A 1J78A 2DG5A 3WHQA 3FWBC 3UIVA 5ID9A 2BXKA 4M70B 3B9MA 4BY9C 2DYOA 1NT2B 2KWFA 2EFHA 3A75A 4OR0A 1BJ5A 3KIKA 1H9ZA 4HGKA 1HA2A 2LOQA 2VUFA 3G9KD 2KBZA 2OT3A 1KDXA 2LQIA 2XVVA 2BXAA 2ROHA 3FNMA 4G04A 2EFEA
chains in the Genus database with same CATH topology
3NVIA 4LB2A 2EFCA 2DBXA 3A73A 1HK4A 4F5VA 2E0XA 2YDFA 4F5TA 4ZUXV 2NQOA 3NMUA 1HK1A 2XW0A 1H5WA 1BM0A 1GNIA 2AJEA 3NVMA 4LA0A 2XVWA 4K71A 2QMCA 4OT2A 3SIUB 4E99A 3W1SA 4F5SA 1TF0A 3WHSA 5IFOA 4S1YA 2BXLA 2NNWA 4GDKB 5IIHA 3JQZA 2OZBB 1N5UA 4EMXA 2BXEA 2E0YA 5FUOA 1HK5A 2DBUA 4OTUA 2BXGA 1BKEA 2BXPA 1VFIA 3H3AA 2XSIA 4LB9A 3PLAA 3V09A 3ICXA 4FJCB 3KJLA 2BXFA 2BXNA 4L9QA 1IJGA 1LNSA 5DBYA 2QHBA 2BXHA 3CX9A 4K2CA 2BX8A 5IIUA 5D7GA 3V03A 1LOTA 5GIOA 2EFDA 1UORA 4FK5B 1GNJA 5ID7A 5BPKA 1MA9A 5GINA 5GHKA 4JK4A 4GDXA 2BXMA 4Z69A 3GQXA 2VDBA 4DHXB 4WA6B 2BXCA 3FWCC 3LU8A 3M99C 3V08A 4Z9OA 4IW2A 4N3ZA 1E7AA 5B5TA 1MIVA 3SQJA 3H37A 2BXIA 4L8UA 3WHRA 2Z8IA 3GQUA 4L9KA 3LU6A 2XMOA 4LUFA 5GIPA 1TXUA 4IW1A 4F5UA 4FIPB 4ZBKA 2BXQA 1VZSA 4BKEA 1MIWA 1E7IA 2XVUA 4ZBQA 2V36A 3TDLA 1AO6A 4TQ0A 4PO0A 3SIVB 4NAWB 1MIYA 2Z8KA 1E7HA 3MHSB 2BXDA 4GDLB 3JRYA 2CKXA 5HOZA 1E7FA 3LU7A 4J2VA 1E7CA 2BXBA 2XVQA 4N0FD 1KXPD 3B9LA 3NVKA 1E7BA 4C31B 3GA9L 4GG2A 3VQIA 5DQFA 4HGMB 4OTTA 5IJ5A 1HK2A 1E78A 4G03A 4ZBRA 5IJEA 2I2ZA 1E7GA 1FOUA 1E7EA 4MBEC 2Z8JA 4ZC6A 2DYMA 4TQ1A 4W4UB 1J7EA 3MHHB 4N0UD 4LUHA 4G01A 2BXOA 4ZCGA 1JNBA 2JUHA 5IIXA 5IJFA 1KW2A 2DBWA 2I30A 1O9XA 2VUEA 2XW1A 2QM6A 1HK3A 1J78A 2DG5A 3WHQA 3FWBC 3UIVA 5ID9A 2BXKA 4M70B 3B9MA 4BY9C 2DYOA 1NT2B 2EFHA 3A75A 4OR0A 1BJ5A 3KIKA 1H9ZA 4HGKA 1HA2A 2LOQA 2VUFA 3G9KD 2KBZA 2OT3A 2XVVA 2BXAA 2ROHA 3FNMA 4G04A 2EFEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4LB2 A;  3A73 A;  1HK4 A;  4F5V A;  2YDF A;  4F5T A;  1HK1 A;  2XW0 A;  1BM0 A;  1GNI A;  4LA0 A;  4OT2 A;  2XVW A;  4K71 A;  4E99 A;  4F5S A;  1TF0 A;  5IFO A;  4S1Y A;  2BXL A;  5IIH A;  3JQZ A;  1N5U A;  4EMX A;  2BXE A;  5FUO A;  1HK5 A;  2BXG A;  1BKE A;  2BXP A;  2XSI A;  4LB9 A;  3V09 A;  2BXF A;  2BXN A;  4L9Q A;  5DBY A;  2BXH A;  3CX9 A;  4K2C A;  2BX8 A;  5IIU A;  3V03 A;  1LOT A;  1UOR A;  1GNJ A;  5ID7 A;  1MA9 A;  5GHK A;  4JK4 A;  2BXM A;  4Z69 A;  2VDB A;  2BXC A;  3LU8 A;  3V08 A;  4IW2 A;  1E7A A;  3SQJ A;  2BXI A;  4L8U A;  4L9K A;  3LU6 A;  4LUF A;  4IW1 A;  4F5U A;  2BXQ A;  4BKE A;  4ZBQ A;  1E7I A;  2XVU A;  3TDL A;  1AO6 A;  4PO0 A;  1E7H A;  2BXD A;  3JRY A;  5HOZ A;  1E7F A;  3LU7 A;  4J2V A;  1E7C A;  2BXB A;  2XVQ A;  4N0F D;  1KXP D;  3B9L A;  1E7B A;  5DQF A;  4HGM B;  5IJ5 A;  1HK2 A;  1E78 A;  4G03 A;  4ZBR A;  5IJE A;  2I2Z A;  1E7G A;  1E7E A;  1J7E A;  4N0U D;  4LUH A;  5IIX A;  2BXO A;  5IJF A;  1KW2 A;  2I30 A;  1O9X A;  2VUE A;  2XW1 A;  1HK3 A;  1J78 A;  3UIV A;  5ID9 A;  2BXK A;  3B9M A;  4OR0 A;  1BJ5 A;  4HGK A;  1H9Z A;  1HA2 A;  2VUF A;  2XVV A;  2BXA A;  4G04 A; 
#chains in the Genus database with same CATH topology
 3NVI A;  4LB2 A;  2EFC A;  2DBX A;  3A73 A;  1HK4 A;  4F5V A;  2E0X A;  2YDF A;  4F5T A;  4ZUX V;  2NQO A;  3NMU A;  1HK1 A;  2XW0 A;  1H5W A;  1BM0 A;  1GNI A;  2AJE A;  3NVM A;  4LA0 A;  2XVW A;  4K71 A;  2QMC A;  4OT2 A;  3SIU B;  4E99 A;  3W1S A;  4F5S A;  1TF0 A;  3WHS A;  5IFO A;  1MM8 A;  4S1Y A;  2BXL A;  2NNW A;  2GUT A;  4GDK B;  3JQZ A;  5IIH A;  2OZB B;  1N5U A;  4EMX A;  2BXE A;  2E0Y A;  5FUO A;  1MUH A;  1HK5 A;  2DBU A;  4OTU A;  4DM0 A;  2BXG A;  1BKE A;  2BXP A;  1VFI A;  3H3A A;  2XSI A;  4LB9 A;  3PLA A;  3V09 A;  3ICX A;  4FJC B;  3KJL A;  2BXF A;  2BXN A;  4L9Q A;  1IJG A;  1LNS A;  5DBY A;  2QHB A;  2BXH A;  3ECP A;  3CX9 A;  3BPJ A;  4K2C A;  2BX8 A;  5IIU A;  5D7G A;  3V03 A;  1LOT A;  5GIO A;  2EFD A;  1UOR A;  4FK5 B;  1GNJ A;  5ID7 A;  5BPK A;  1MA9 A;  5GIN A;  5GHK A;  4JK4 A;  4GDX A;  2BXM A;  4Z69 A;  3GQX A;  2VDB A;  4DHX B;  4WA6 B;  2BXC A;  3FWC C;  3LU8 A;  3M99 C;  3V08 A;  4D7X A;  4Z9O A;  4IW2 A;  4N3Z A;  1E7A A;  5B5T A;  1MIV A;  3SQJ A;  3H37 A;  2BXI A;  4L8U A;  3WHR A;  2Z8I A;  3GQU A;  4L9K A;  3LU6 A;  2AGH B;  2XMO A;  4LUF A;  5GIP A;  1TXU A;  4IW1 A;  4F5U A;  4FIP B;  4ZBK A;  2BXQ A;  1VZS A;  4BKE A;  1MIW A;  1E7I A;  2LXT A;  2XVU A;  2V36 A;  4ZBQ A;  3TDL A;  4TQ0 A;  4PO0 A;  1AO6 A;  3SIV B;  4NAW B;  1MIY A;  2Z8K A;  4I9O A;  1E7H A;  3MHS B;  2BXD A;  4GDL B;  3JRY A;  2CKX A;  5HOZ A;  1E7F A;  3LU7 A;  4J2V A;  1E7C A;  2BXB A;  2XVQ A;  4N0F D;  1KXP D;  3B9L A;  3NVK A;  1E7B A;  4C31 B;  2LQH A;  3GA9 L;  4GG2 A;  2LXS A;  3VQI A;  5DQF A;  4HGM B;  4OTT A;  5IJ5 A;  1MUS A;  2K0N A;  1HK2 A;  1E78 A;  4G03 A;  4ZBR A;  5IJE A;  2I2Z A;  1E7G A;  1FOU A;  1E7E A;  4MBE C;  2Z8J A;  1SB0 A;  4ZC6 A;  2DYM A;  4TQ1 A;  4W4U B;  1J7E A;  3MHH B;  4N0U D;  4LUH A;  4G01 A;  2BXO A;  4ZCG A;  1JNB A;  2JUH A;  5IIX A;  5IJF A;  1KW2 A;  2DBW A;  2I30 A;  1O9X A;  2VUE A;  2XW1 A;  2QM6 A;  1HK3 A;  1J78 A;  2DG5 A;  3WHQ A;  3FWB C;  3UIV A;  5ID9 A;  2BXK A;  4M70 B;  3B9M A;  4BY9 C;  2DYO A;  1NT2 B;  2KWF A;  2EFH A;  3A75 A;  4OR0 A;  1BJ5 A;  3KIK A;  1H9Z A;  4HGK A;  1HA2 A;  2LOQ A;  2VUF A;  3G9K D;  2KBZ A;  2OT3 A;  1KDX A;  2LQI A;  2XVV A;  2BXA A;  2ROH A;  3FNM A;  4G04 A;  2EFE A; 
#chains in the Genus database with same CATH homology
 3NVI A;  4LB2 A;  2EFC A;  2DBX A;  3A73 A;  1HK4 A;  4F5V A;  2E0X A;  2YDF A;  4F5T A;  4ZUX V;  2NQO A;  3NMU A;  1HK1 A;  2XW0 A;  1H5W A;  1BM0 A;  1GNI A;  2AJE A;  3NVM A;  4LA0 A;  2XVW A;  4K71 A;  2QMC A;  4OT2 A;  3SIU B;  4E99 A;  3W1S A;  4F5S A;  1TF0 A;  3WHS A;  5IFO A;  4S1Y A;  2BXL A;  2NNW A;  4GDK B;  5IIH A;  3JQZ A;  2OZB B;  1N5U A;  4EMX A;  2BXE A;  2E0Y A;  5FUO A;  1HK5 A;  2DBU A;  4OTU A;  2BXG A;  1BKE A;  2BXP A;  1VFI A;  3H3A A;  2XSI A;  4LB9 A;  3PLA A;  3V09 A;  3ICX A;  4FJC B;  3KJL A;  2BXF A;  2BXN A;  4L9Q A;  1IJG A;  1LNS A;  5DBY A;  2QHB A;  2BXH A;  3CX9 A;  4K2C A;  2BX8 A;  5IIU A;  5D7G A;  3V03 A;  1LOT A;  5GIO A;  2EFD A;  1UOR A;  4FK5 B;  1GNJ A;  5ID7 A;  5BPK A;  1MA9 A;  5GIN A;  5GHK A;  4JK4 A;  4GDX A;  2BXM A;  4Z69 A;  3GQX A;  2VDB A;  4DHX B;  4WA6 B;  2BXC A;  3FWC C;  3LU8 A;  3M99 C;  3V08 A;  4Z9O A;  4IW2 A;  4N3Z A;  1E7A A;  5B5T A;  1MIV A;  3SQJ A;  3H37 A;  2BXI A;  4L8U A;  3WHR A;  2Z8I A;  3GQU A;  4L9K A;  3LU6 A;  2XMO A;  4LUF A;  5GIP A;  1TXU A;  4IW1 A;  4F5U A;  4FIP B;  4ZBK A;  2BXQ A;  1VZS A;  4BKE A;  1MIW A;  1E7I A;  2XVU A;  4ZBQ A;  2V36 A;  3TDL A;  1AO6 A;  4TQ0 A;  4PO0 A;  3SIV B;  4NAW B;  1MIY A;  2Z8K A;  1E7H A;  3MHS B;  2BXD A;  4GDL B;  3JRY A;  2CKX A;  5HOZ A;  1E7F A;  3LU7 A;  4J2V A;  1E7C A;  2BXB A;  2XVQ A;  4N0F D;  1KXP D;  3B9L A;  3NVK A;  1E7B A;  4C31 B;  3GA9 L;  4GG2 A;  3VQI A;  5DQF A;  4HGM B;  4OTT A;  5IJ5 A;  1HK2 A;  1E78 A;  4G03 A;  4ZBR A;  5IJE A;  2I2Z A;  1E7G A;  1FOU A;  1E7E A;  4MBE C;  2Z8J A;  4ZC6 A;  2DYM A;  4TQ1 A;  4W4U B;  1J7E A;  3MHH B;  4N0U D;  4LUH A;  4G01 A;  2BXO A;  4ZCG A;  1JNB A;  2JUH A;  5IIX A;  5IJF A;  1KW2 A;  2DBW A;  2I30 A;  1O9X A;  2VUE A;  2XW1 A;  2QM6 A;  1HK3 A;  1J78 A;  2DG5 A;  3WHQ A;  3FWB C;  3UIV A;  5ID9 A;  2BXK A;  4M70 B;  3B9M A;  4BY9 C;  2DYO A;  1NT2 B;  2EFH A;  3A75 A;  4OR0 A;  1BJ5 A;  3KIK A;  1H9Z A;  4HGK A;  1HA2 A;  2LOQ A;  2VUF A;  3G9K D;  2KBZ A;  2OT3 A;  2XVV A;  2BXA A;  2ROH A;  3FNM A;  4G04 A;  2EFE A; 
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