1KDXA

Kix domain of mouse cbp (creb binding protein) in complex with phosphorylated kinase inducible domain (pkid) of rat creb (cyclic amp response element binding protein), nmr 17 structures
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
81
structure length
81
Chain Sequence
GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription regulation complex
molecule keywords CBP
publication title Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions.
pubmed doi rcsb
source organism Mus musculus
total genus 32
structure length 81
sequence length 81
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 1997-09-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02172 KIX KIX domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.20 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Coactivator CBP, KIX domain 1kdxA00
4I9OA 2KWFA 2LQHA 2LXTA 2GUTA 1SB0A 2K0NA 1KDXA 2AGHB 2LXSA 4D7XA 2LQIA
chains in the Genus database with same CATH superfamily
3FNMA 3A73A 5IJFA 4C31B 3BPJA 2BXLA 5BPKA 2AJEA 2BXHA 3G9KD 2BXCA 4F5VA 3GQUA 2BXBA 4D7XA 3NVIA 2DBUA 3TDLA 3V08A 4HGKA 1HK3A 3NVMA 1TXUA 1VFIA 1TF0A 3LU8A 3MHHB 4ZBRA 2LOQA 3ICXA 5ID7A 2OZBB 4IW2A 5GHKA 2VUFA 4FIPB 4ZBKA 4WA6B 4DM0A 4G01A 2NQOA 2V36A 5IFOA 1BJ5A 1LNSA 4F5SA 2EFDA 3VQIA 5DBYA 1O9XA 5IIXA 3ECPA 2EFHA 5HOZA 1HK5A 5GIOA 1JNBA 2GUTA 1E7HA 1SB0A 4IW1A 4K2CA 5B5TA 1MUHA 3GQXA 4OT2A 4FJCB 3SIUB 1KDXA 4F5TA 3LU6A 5IJ5A 1HK1A 1BM0A 2OT3A 4ZUXV 5DQFA 3FWCC 1GNIA 1E7IA 4BKEA 1LOTA 1HA2A 5GIPA 3FWBC 3V09A 2BXOA 4GDXA 4TQ1A 4BY9C 4EMXA 1E7AA 2I2ZA 4LUHA 2VDBA 4PO0A 4ZCGA 3NMUA 4K71A 2QHBA 1J78A 4ZC6A 5D7GA 1IJGA 2BXGA 5GINA 1N5UA 2K0NA 3SQJA 1E7FA 3W1SA 1KW2A 2XSIA 4GDLB 1HK4A 1E7BA 2LXSA 4G03A 1VZSA 4LB2A 4N0FD 4W4UB 5IIHA 4FK5B 1MM8A 4LA0A 4N0UD 5FUOA 2XVQA 4NAWB 1AO6A 2BXFA 1HK2A 4LUFA 2Z8IA 2Z8JA 4HGMB 4N3ZA 2DBWA 2KWFA 2LQHA 4I9OA 4L9KA 4ZBQA 3PLAA 3LU7A 4E99A 3GA9L 1NT2B 3KIKA 4GDKB 3M99C 4GG2A 3CX9A 2LXTA 1FOUA 2BXIA 4OR0A 1MA9A 4J2VA 4MBEC 1E78A 2XW0A 5ID9A 2Z8KA 4TQ0A 5IIUA 2CKXA 5IJEA 2JUHA 3MHSB 1UORA 1MIWA 2QMCA 3H3AA 3V03A 2KBZA 2XVVA 2BX8A 1H9ZA 2BXKA 2XMOA 2BXEA 3B9MA 2I30A 2DBXA 2DYMA 2VUEA 1MIYA 2E0XA 4JK4A 4L8UA 4DHXB 4F5UA 3WHQA 2BXQA 2BXAA 2DG5A 3JRYA 3SIVB 2LQIA 2BXDA 2XVUA 4M70B 2EFEA 4G04A 4OTTA 1E7CA 2BXPA 2EFCA 1E7EA 4Z69A 2XW1A 3JQZA 2DYOA 3WHSA 1MIVA 3UIVA 2QM6A 3NVKA 3A75A 3H37A 1J7EA 2AGHB 1E7GA 2E0YA 4L9QA 2BXMA 2BXNA 2NNWA 2ROHA 4OTUA 4S1YA 1BKEA 1MUSA 4LB9A 3B9LA 1GNJA 3WHRA 1KXPD 3KJLA 1H5WA 2YDFA 4Z9OA 2XVWA
chains in the Genus database with same CATH topology
4I9OA 2KWFA 2LQHA 2LXTA 2GUTA 1SB0A 2K0NA 1KDXA 2AGHB 2LXSA 4D7XA 2LQIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4I9O A;  2KWF A;  2LQH A;  2LXT A;  2GUT A;  1SB0 A;  2K0N A;  1KDX A;  2AGH B;  2LXS A;  4D7X A;  2LQI A; 
#chains in the Genus database with same CATH topology
 3FNM A;  3A73 A;  5IJF A;  4C31 B;  3BPJ A;  2BXL A;  5BPK A;  2AJE A;  2BXH A;  3G9K D;  2BXC A;  4F5V A;  3GQU A;  2BXB A;  4D7X A;  3NVI A;  2DBU A;  3TDL A;  3V08 A;  4HGK A;  1HK3 A;  3NVM A;  1TXU A;  1VFI A;  1TF0 A;  3LU8 A;  3MHH B;  4ZBR A;  2LOQ A;  3ICX A;  5ID7 A;  2OZB B;  4IW2 A;  5GHK A;  2VUF A;  4FIP B;  4ZBK A;  4WA6 B;  4DM0 A;  4G01 A;  2NQO A;  2V36 A;  5IFO A;  1BJ5 A;  1LNS A;  4F5S A;  2EFD A;  3VQI A;  5DBY A;  1O9X A;  5IIX A;  3ECP A;  2EFH A;  5HOZ A;  1HK5 A;  5GIO A;  1JNB A;  2GUT A;  1E7H A;  1SB0 A;  4IW1 A;  4K2C A;  5B5T A;  1MUH A;  3GQX A;  4OT2 A;  4FJC B;  3SIU B;  1KDX A;  4F5T A;  3LU6 A;  5IJ5 A;  1HK1 A;  1BM0 A;  2OT3 A;  4ZUX V;  5DQF A;  3FWC C;  1GNI A;  1E7I A;  4BKE A;  1LOT A;  1HA2 A;  5GIP A;  3FWB C;  3V09 A;  2BXO A;  4GDX A;  4TQ1 A;  4BY9 C;  4EMX A;  1E7A A;  2I2Z A;  4LUH A;  2VDB A;  4PO0 A;  4ZCG A;  3NMU A;  4K71 A;  2QHB A;  1J78 A;  4ZC6 A;  5D7G A;  1IJG A;  2BXG A;  5GIN A;  1N5U A;  2K0N A;  3SQJ A;  1E7F A;  3W1S A;  1KW2 A;  2XSI A;  4GDL B;  1HK4 A;  1E7B A;  2LXS A;  4G03 A;  1VZS A;  4LB2 A;  4N0F D;  4W4U B;  5IIH A;  4FK5 B;  1MM8 A;  4LA0 A;  4N0U D;  5FUO A;  2XVQ A;  4NAW B;  1AO6 A;  2BXF A;  1HK2 A;  4LUF A;  2Z8I A;  2Z8J A;  4HGM B;  4N3Z A;  2DBW A;  2KWF A;  2LQH A;  4I9O A;  4L9K A;  4ZBQ A;  3PLA A;  3LU7 A;  4E99 A;  3GA9 L;  1NT2 B;  3KIK A;  4GDK B;  3M99 C;  4GG2 A;  3CX9 A;  2LXT A;  1FOU A;  2BXI A;  4OR0 A;  1MA9 A;  4J2V A;  4MBE C;  1E78 A;  2XW0 A;  5ID9 A;  2Z8K A;  4TQ0 A;  5IIU A;  2CKX A;  5IJE A;  2JUH A;  3MHS B;  1UOR A;  1MIW A;  2QMC A;  3H3A A;  3V03 A;  2KBZ A;  2XVV A;  2BX8 A;  1H9Z A;  2BXK A;  2XMO A;  2BXE A;  3B9M A;  2I30 A;  2DBX A;  2DYM A;  2VUE A;  1MIY A;  2E0X A;  4JK4 A;  4L8U A;  4DHX B;  4F5U A;  3WHQ A;  2BXQ A;  2BXA A;  2DG5 A;  3JRY A;  3SIV B;  2LQI A;  2BXD A;  2XVU A;  4M70 B;  2EFE A;  4G04 A;  4OTT A;  1E7C A;  2BXP A;  2EFC A;  1E7E A;  4Z69 A;  2XW1 A;  3JQZ A;  2DYO A;  3WHS A;  1MIV A;  3UIV A;  2QM6 A;  3NVK A;  3A75 A;  3H37 A;  1J7E A;  2AGH B;  1E7G A;  2E0Y A;  4L9Q A;  2BXM A;  2BXN A;  2NNW A;  2ROH A;  4OTU A;  4S1Y A;  1BKE A;  1MUS A;  4LB9 A;  3B9L A;  1GNJ A;  3WHR A;  1KXP D;  3KJL A;  1H5W A;  2YDF A;  4Z9O A;  2XVW A; 
#chains in the Genus database with same CATH homology
 4I9O A;  2KWF A;  2LQH A;  2LXT A;  2GUT A;  1SB0 A;  2K0N A;  1KDX A;  2AGH B;  2LXS A;  4D7X A;  2LQI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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