2AJEA

Solution structure of the arabidopsis thaliana telomeric repeat-binding protein dna binding domain
Total Genus 22

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
97
structure length
97
Chain Sequence
QRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAHGYWTQQQMQQLQQNV

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (18-29)TIV2 (32-35)AH2 (36-41)EMPTYTIV3 (41-44)TI1 (44-47)TI2 (46-49)TIV4 (42-45)TI3 (69-72)TIV6 (72-75)TI'1 (71-74)O1 (78-80)AH4 (80-95)TI'2 (96-99)TIV1 (29-32)AH3 (52-65)TIV5 (65-68)Updating...
connected with : NaN
molecule tags Dna binding protein
source organism Arabidopsis thaliana
publication title Solution structure of the Arabidopsis thaliana telomeric repeat-binding protein DNA binding domain: a new fold with an additional C-terminal helix
pubmed doi rcsb
molecule keywords telomere repeat-binding protein
total genus 22
structure length 97
sequence length 97
ec nomenclature
pdb deposition date 2005-08-01
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.220 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2ajeA00
2AJEA 2QHBA 2CKXA 2JUHA 2ROHA
chains in the Genus database with same CATH superfamily
2BXHA 4G03A 4F5UA 1E7FA 1E7AA 2Z8KA 1KDXA 1HK1A 4D7XA 3NMUA 1SB0A 2CKXA 5GIOA 1MIVA 5IIUA 4PO0A 4MBEC 3LU8A 4BY9C 4GG2A 2BXQA 2LXTA 4IW1A 4L9KA 3SQJA 5IIHA 2VDBA 4N3ZA 1HK4A 1O9XA 2BXAA 2DBWA 4K71A 4L8UA 4TQ0A 5HOZA 2GUTA 2DBUA 2LQIA 4OT2A 1HA2A 4F5VA 1N5UA 4G04A 1MUHA 1IJGA 4LUHA 4LUFA 4FJCB 3WHSA 1E78A 1E7CA 4G01A 4OR0A 5IFOA 4F5SA 2VUFA 2EFHA 1AO6A 3WHRA 1MIWA 1TXUA 1GNJA 3B9MA 5FUOA 1GNIA 4JK4A 1LNSA 2DYOA 1BM0A 1E7HA 2JUHA 4GDLB 5DQFA 4C31B 4ZC6A 4DHXB 4WA6B 4E99A 2BXDA 2QM6A 4GDKB 4IW2A 2DBXA 3GA9L 3BPJA 5IIXA 1E7GA 4BKEA 2LQHA 4ZBKA 2DYMA 5IJFA 4HGMB 2NNWA 1KXPD 4OTTA 2I2ZA 1FOUA 3KJLA 2XMOA 3ICXA 3W1SA 2BXBA 3SIVB 4I9OA 2EFCA 4N0FD 5D7GA 2BXPA 1H5WA 2AGHB 4ZBRA 4TQ1A 1LOTA 2KBZA 2I30A 2OT3A 2XVVA 3KIKA 3NVMA 4Z9OA 3FWBC 3TDLA 3NVIA 2NQOA 1VZSA 2BX8A 3G9KD 2QHBA 4NAWB 2BXKA 2BXGA 4ZUXV 3CX9A 3FWCC 4J2VA 2XVWA 3GQUA 4LB2A 3ECPA 3A73A 3JQZA 3LU7A 3A75A 4EMXA 2XVUA 3NVKA 3VQIA 1J7EA 1E7IA 1MIYA 3LU6A 3UIVA 3PLAA 5BPKA 2XVQA 3B9LA 2BXFA 5GINA 1JNBA 2BXEA 2XW0A 5IJEA 2EFEA 2EFDA 2BXIA 4OTUA 1H9ZA 2Z8JA 5GIPA 4DM0A 3MHSB 1KW2A 5ID9A 2YDFA 2XSIA 3MHHB 3V09A 1J78A 3H37A 4K2CA 3V03A 4F5TA 1E7BA 1E7EA 2OZBB 2BXMA 5ID7A 2KWFA 4W4UB 4LB9A 5DBYA 5IJ5A 3FNMA 1MM8A 1HK5A 4LA0A 2E0YA 2ROHA 4HGKA 2Z8IA 2AJEA 2VUEA 1HK2A 4N0UD 5GHKA 1TF0A 2BXOA 1UORA 4FIPB 5B5TA 2K0NA 3WHQA 4M70B 1NT2B 3SIUB 2DG5A 4Z69A 3V08A 1MUSA 4ZCGA 4L9QA 3H3AA 3GQXA 2BXCA 3JRYA 3M99C 4FK5B 2XW1A 4S1YA 2LXSA 4ZBQA 1HK3A 2V36A 2E0XA 2BXLA 2BXNA 1VFIA 1BJ5A 1MA9A 2QMCA 1BKEA 2LOQA 4GDXA
chains in the Genus database with same CATH topology
2BXHA 4G03A 4F5UA 1E7FA 1E7AA 2Z8KA 1HK1A 3NMUA 2CKXA 5GIOA 1MIVA 5IIUA 4PO0A 4MBEC 3LU8A 4BY9C 4GG2A 2BXQA 4IW1A 4L9KA 3SQJA 5IIHA 2VDBA 4N3ZA 1HK4A 1O9XA 2BXAA 2DBWA 4K71A 4L8UA 4TQ0A 5HOZA 2DBUA 4OT2A 1HA2A 4F5VA 1N5UA 4G04A 1IJGA 4LUHA 4LUFA 4FJCB 3WHSA 1E78A 1E7CA 4G01A 4OR0A 5IFOA 4F5SA 2VUFA 2EFHA 1AO6A 3WHRA 1MIWA 1TXUA 1GNJA 3B9MA 5FUOA 1GNIA 4JK4A 1LNSA 2DYOA 1BM0A 1E7HA 2JUHA 4GDLB 5DQFA 4C31B 4ZC6A 4DHXB 4WA6B 4E99A 2BXDA 2QM6A 4GDKB 4IW2A 2DBXA 3GA9L 5IIXA 1E7GA 4BKEA 4ZBKA 2DYMA 5IJFA 4HGMB 2NNWA 1KXPD 4OTTA 2I2ZA 1FOUA 3KJLA 2XMOA 3ICXA 3W1SA 2BXBA 3SIVB 2EFCA 4N0FD 5D7GA 2BXPA 1H5WA 4ZBRA 4TQ1A 1LOTA 2KBZA 2I30A 2OT3A 2XVVA 3KIKA 3NVMA 4Z9OA 3FWBC 3TDLA 3NVIA 2NQOA 1VZSA 2BX8A 3G9KD 2QHBA 4NAWB 2BXKA 2BXGA 4ZUXV 3CX9A 3FWCC 4J2VA 2XVWA 3GQUA 4LB2A 3A73A 3JQZA 3LU7A 3A75A 4EMXA 2XVUA 3NVKA 3VQIA 1J7EA 1E7IA 1MIYA 3LU6A 3UIVA 3PLAA 5BPKA 2XVQA 3B9LA 2BXFA 5GINA 1JNBA 2BXEA 2XW0A 5IJEA 2EFEA 2EFDA 2BXIA 4OTUA 1H9ZA 2Z8JA 5GIPA 3MHSB 1KW2A 5ID9A 2YDFA 2XSIA 3MHHB 3V09A 1J78A 3H37A 4K2CA 3V03A 4F5TA 1E7BA 1E7EA 2OZBB 2BXMA 5ID7A 4W4UB 4LB9A 5DBYA 5IJ5A 3FNMA 1HK5A 4LA0A 2E0YA 2ROHA 4HGKA 2Z8IA 2AJEA 2VUEA 1HK2A 4N0UD 5GHKA 1TF0A 2BXOA 1UORA 4FIPB 5B5TA 3WHQA 3SIUB 4M70B 1NT2B 2DG5A 4Z69A 3V08A 4ZCGA 4L9QA 3H3AA 3GQXA 2BXCA 3JRYA 3M99C 4FK5B 2XW1A 4S1YA 4ZBQA 1HK3A 2V36A 2E0XA 2BXLA 2BXNA 1VFIA 1BJ5A 1MA9A 2QMCA 1BKEA 2LOQA 4GDXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AJE A;  2QHB A;  2CKX A;  2JUH A;  2ROH A; 
#chains in the Genus database with same CATH topology
 2BXH A;  4G03 A;  4F5U A;  1E7F A;  1E7A A;  2Z8K A;  1KDX A;  1HK1 A;  4D7X A;  3NMU A;  1SB0 A;  2CKX A;  5GIO A;  1MIV A;  5IIU A;  4PO0 A;  4MBE C;  3LU8 A;  4BY9 C;  4GG2 A;  2BXQ A;  2LXT A;  4IW1 A;  4L9K A;  3SQJ A;  5IIH A;  2VDB A;  4N3Z A;  1HK4 A;  1O9X A;  2BXA A;  2DBW A;  4K71 A;  4L8U A;  4TQ0 A;  5HOZ A;  2GUT A;  2DBU A;  2LQI A;  4OT2 A;  1HA2 A;  4F5V A;  1N5U A;  4G04 A;  1MUH A;  1IJG A;  4LUH A;  4LUF A;  4FJC B;  3WHS A;  1E78 A;  1E7C A;  4G01 A;  4OR0 A;  5IFO A;  4F5S A;  2VUF A;  2EFH A;  1AO6 A;  3WHR A;  1MIW A;  1TXU A;  1GNJ A;  3B9M A;  5FUO A;  1GNI A;  4JK4 A;  1LNS A;  2DYO A;  1BM0 A;  1E7H A;  2JUH A;  4GDL B;  5DQF A;  4C31 B;  4ZC6 A;  4DHX B;  4WA6 B;  4E99 A;  2BXD A;  2QM6 A;  4GDK B;  4IW2 A;  2DBX A;  3GA9 L;  3BPJ A;  5IIX A;  1E7G A;  4BKE A;  2LQH A;  4ZBK A;  2DYM A;  5IJF A;  4HGM B;  2NNW A;  1KXP D;  4OTT A;  2I2Z A;  1FOU A;  3KJL A;  2XMO A;  3ICX A;  3W1S A;  2BXB A;  3SIV B;  4I9O A;  2EFC A;  4N0F D;  5D7G A;  2BXP A;  1H5W A;  2AGH B;  4ZBR A;  4TQ1 A;  1LOT A;  2KBZ A;  2I30 A;  2OT3 A;  2XVV A;  3KIK A;  3NVM A;  4Z9O A;  3FWB C;  3TDL A;  3NVI A;  2NQO A;  1VZS A;  2BX8 A;  3G9K D;  2QHB A;  4NAW B;  2BXK A;  2BXG A;  4ZUX V;  3CX9 A;  3FWC C;  4J2V A;  2XVW A;  3GQU A;  4LB2 A;  3ECP A;  3A73 A;  3JQZ A;  3LU7 A;  3A75 A;  4EMX A;  2XVU A;  3NVK A;  3VQI A;  1J7E A;  1E7I A;  1MIY A;  3LU6 A;  3UIV A;  3PLA A;  5BPK A;  2XVQ A;  3B9L A;  2BXF A;  5GIN A;  1JNB A;  2BXE A;  2XW0 A;  5IJE A;  2EFE A;  2EFD A;  2BXI A;  4OTU A;  1H9Z A;  2Z8J A;  5GIP A;  4DM0 A;  3MHS B;  1KW2 A;  5ID9 A;  2YDF A;  2XSI A;  3MHH B;  3V09 A;  1J78 A;  3H37 A;  4K2C A;  3V03 A;  4F5T A;  1E7B A;  1E7E A;  2OZB B;  2BXM A;  5ID7 A;  2KWF A;  4W4U B;  4LB9 A;  5DBY A;  5IJ5 A;  3FNM A;  1MM8 A;  1HK5 A;  4LA0 A;  2E0Y A;  2ROH A;  4HGK A;  2Z8I A;  2AJE A;  2VUE A;  1HK2 A;  4N0U D;  5GHK A;  1TF0 A;  2BXO A;  1UOR A;  4FIP B;  5B5T A;  2K0N A;  3WHQ A;  4M70 B;  1NT2 B;  3SIU B;  2DG5 A;  4Z69 A;  3V08 A;  1MUS A;  4ZCG A;  4L9Q A;  3H3A A;  3GQX A;  2BXC A;  3JRY A;  3M99 C;  4FK5 B;  2XW1 A;  4S1Y A;  2LXS A;  4ZBQ A;  1HK3 A;  2V36 A;  2E0X A;  2BXL A;  2BXN A;  1VFI A;  1BJ5 A;  1MA9 A;  2QMC A;  1BKE A;  2LOQ A;  4GDX A; 
#chains in the Genus database with same CATH homology
 2BXH A;  4G03 A;  4F5U A;  1E7F A;  1E7A A;  2Z8K A;  1HK1 A;  3NMU A;  2CKX A;  5GIO A;  1MIV A;  5IIU A;  4PO0 A;  4MBE C;  3LU8 A;  4BY9 C;  4GG2 A;  2BXQ A;  4IW1 A;  4L9K A;  3SQJ A;  5IIH A;  2VDB A;  4N3Z A;  1HK4 A;  1O9X A;  2BXA A;  2DBW A;  4K71 A;  4L8U A;  4TQ0 A;  5HOZ A;  2DBU A;  4OT2 A;  1HA2 A;  4F5V A;  1N5U A;  4G04 A;  1IJG A;  4LUH A;  4LUF A;  4FJC B;  3WHS A;  1E78 A;  1E7C A;  4G01 A;  4OR0 A;  5IFO A;  4F5S A;  2VUF A;  2EFH A;  1AO6 A;  3WHR A;  1MIW A;  1TXU A;  1GNJ A;  3B9M A;  5FUO A;  1GNI A;  4JK4 A;  1LNS A;  2DYO A;  1BM0 A;  1E7H A;  2JUH A;  4GDL B;  5DQF A;  4C31 B;  4ZC6 A;  4DHX B;  4WA6 B;  4E99 A;  2BXD A;  2QM6 A;  4GDK B;  4IW2 A;  2DBX A;  3GA9 L;  5IIX A;  1E7G A;  4BKE A;  4ZBK A;  2DYM A;  5IJF A;  4HGM B;  2NNW A;  1KXP D;  4OTT A;  2I2Z A;  1FOU A;  3KJL A;  2XMO A;  3ICX A;  3W1S A;  2BXB A;  3SIV B;  2EFC A;  4N0F D;  5D7G A;  2BXP A;  1H5W A;  4ZBR A;  4TQ1 A;  1LOT A;  2KBZ A;  2I30 A;  2OT3 A;  2XVV A;  3KIK A;  3NVM A;  4Z9O A;  3FWB C;  3TDL A;  3NVI A;  2NQO A;  1VZS A;  2BX8 A;  3G9K D;  2QHB A;  4NAW B;  2BXK A;  2BXG A;  4ZUX V;  3CX9 A;  3FWC C;  4J2V A;  2XVW A;  3GQU A;  4LB2 A;  3A73 A;  3JQZ A;  3LU7 A;  3A75 A;  4EMX A;  2XVU A;  3NVK A;  3VQI A;  1J7E A;  1E7I A;  1MIY A;  3LU6 A;  3UIV A;  3PLA A;  5BPK A;  2XVQ A;  3B9L A;  2BXF A;  5GIN A;  1JNB A;  2BXE A;  2XW0 A;  5IJE A;  2EFE A;  2EFD A;  2BXI A;  4OTU A;  1H9Z A;  2Z8J A;  5GIP A;  3MHS B;  1KW2 A;  5ID9 A;  2YDF A;  2XSI A;  3MHH B;  3V09 A;  1J78 A;  3H37 A;  4K2C A;  3V03 A;  4F5T A;  1E7B A;  1E7E A;  2OZB B;  2BXM A;  5ID7 A;  4W4U B;  4LB9 A;  5DBY A;  5IJ5 A;  3FNM A;  1HK5 A;  4LA0 A;  2E0Y A;  2ROH A;  4HGK A;  2Z8I A;  2AJE A;  2VUE A;  1HK2 A;  4N0U D;  5GHK A;  1TF0 A;  2BXO A;  1UOR A;  4FIP B;  5B5T A;  3WHQ A;  3SIU B;  4M70 B;  1NT2 B;  2DG5 A;  4Z69 A;  3V08 A;  4ZCG A;  4L9Q A;  3H3A A;  3GQX A;  2BXC A;  3JRY A;  3M99 C;  4FK5 B;  2XW1 A;  4S1Y A;  4ZBQ A;  1HK3 A;  2V36 A;  2E0X A;  2BXL A;  2BXN A;  1VFI A;  1BJ5 A;  1MA9 A;  2QMC A;  1BKE A;  2LOQ A;  4GDX A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.