3R2XC

Crystal structure of the de novo designed binding protein hb36.3 in complex the the 1918 influenza virus hemagglutinin
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
82
structure length
82
Chain Sequence
DGQQLNRLLLEWIGAWDPFGLGKDAYDVEAEAVLQAVYETESAFDLAMRIMWIYVFAFNRPIPFPHAQKLARRLLELKQAAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Viral protein/de novo protein
molecule keywords Hemagglutinin
publication title Computational design of proteins targeting the conserved stem region of influenza hemagglutinin.
pubmed doi rcsb
source organism Influenza a virus
total genus 28
structure length 82
sequence length 82
ec nomenclature
pdb deposition date 2011-03-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.340.20 Mainly Alpha Orthogonal Bundle Endonuclease III; domain 1 Apc36109-like domain 3r2xC00
3R2XC 1U84A
chains in the Genus database with same CATH superfamily
4B22A 4YPHA 3L2WA 4HSBA 1ORNA 4PIIA 1ORPA 4YPRA 3OYMA 3OYKA 4BDYA 2NOEA 3S6IA 3KNTA 5DPKA 4E9EA 4UOBA 3OY9A 3D4VA 1NKUA 1YQKA 1XQPA 4OFEA 3F0ZA 3OYJA 4E9GA 1YQLA 4OFAA 2NOFA 4EW0A 1XG7A 1PU7A 4OFHA 3VW4A 2I5WA 5FROA 4E7LA 2XHIA 3CWTA 5KN8A 1LWYA 3I0WA 2W03A 3L2VA 3OS1A 3FHGA 1RRSA 1N3AA 1FN7A 2JPSA 3F10A 5FRMA 3OYAA 5AN4A 4BE0A 3OYHA 2OFIA 3CW7A 4AI5A 2W04A 3OH9A 3L2QA 3G0QA 4BE1A 1KG6A 4B24A 1YQMA 2YG8A 3I0XA 3CWUA 1LMZA 1N39A 5CHZA 1KQJA 2JHJA 1MUNA 4EVVA 1P7MA 1U84A 1MUYA 3CVTA 1YQRA 5FRNA 4E7HA 2NOHA 1MPGA 2JHNA 2OFKA 3N0UA 1M3HA 1DIZA 4EJYA 1NGNA 1KG3A 3LCNA 3KTUA 4B23A 1PU8A 3IHOA 3OS0A 1KG5A 1WEFA 3CWSA 4IKFA 1WEIA 3S3MA 4BDZA 3OYEA 3CVSA 2NOLA 4AI4A 3OYCA 4DK9A 3OYIA 2H56A 4AIAA 3OYDA 3NNQA 1RRQA 4ZTJA 4EJZA 4B21A 3L2RA 4EA5A 4UNFA 1KG4A 1LWVA 4BE2A 3OYNA 4ZTFA 3OGDA 1MUDA 4E9HA 3S3NA 1PU6A 2YG9A 4E7JA 4E7IA 3OYGA 4NZGA 3FHFA 2JG6A 3L2UA 2NOBA 2V75A 1EBMA 3FSPA 3OS2A 2NOIA 2NOZA 3OH6A 3S3OA 3OYBA 4BACA 1M3QA 1N3CA 1KO9A 1KG2A 3CWAA 1XQOA 3OYFA 4E9FA 3R2XC 1KEAA 1WEGA 1PVSA 3N5NX 5KN9A 1HU0A 4EA4A 1KG7A 1P59A 1LWWA 4EW4A 1VRLA 3OYLA 4E7KA 4YOQA 3IH7A 2ABKA
chains in the Genus database with same CATH topology
3R2XC 1U84A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3R2X C;  1U84 A; 
#chains in the Genus database with same CATH topology
 4B22 A;  4YPH A;  3L2W A;  4HSB A;  1ORN A;  4PII A;  1ORP A;  4YPR A;  3OYM A;  3OYK A;  4BDY A;  2NOE A;  3S6I A;  3KNT A;  5DPK A;  4E9E A;  4UOB A;  3OY9 A;  3D4V A;  1NKU A;  1YQK A;  1XQP A;  4OFE A;  3F0Z A;  3OYJ A;  4E9G A;  1YQL A;  4OFA A;  2NOF A;  4EW0 A;  1XG7 A;  1PU7 A;  4OFH A;  3VW4 A;  2I5W A;  5FRO A;  4E7L A;  2XHI A;  3CWT A;  5KN8 A;  1LWY A;  3I0W A;  2W03 A;  3L2V A;  3OS1 A;  3FHG A;  1RRS A;  1N3A A;  1FN7 A;  2JPS A;  3F10 A;  5FRM A;  3OYA A;  5AN4 A;  4BE0 A;  3OYH A;  2OFI A;  3CW7 A;  4AI5 A;  2W04 A;  3OH9 A;  3L2Q A;  3G0Q A;  4BE1 A;  1KG6 A;  4B24 A;  1YQM A;  2YG8 A;  3I0X A;  3CWU A;  1LMZ A;  1N39 A;  5CHZ A;  1KQJ A;  2JHJ A;  1MUN A;  4EVV A;  1P7M A;  1U84 A;  1MUY A;  3CVT A;  1YQR A;  5FRN A;  4E7H A;  2NOH A;  1MPG A;  2JHN A;  2OFK A;  3N0U A;  1M3H A;  1DIZ A;  4EJY A;  1NGN A;  1KG3 A;  3LCN A;  3KTU A;  4B23 A;  1PU8 A;  3IHO A;  3OS0 A;  1KG5 A;  1WEF A;  3CWS A;  4IKF A;  1WEI A;  3S3M A;  4BDZ A;  3OYE A;  3CVS A;  2NOL A;  4AI4 A;  3OYC A;  4DK9 A;  3OYI A;  2H56 A;  4AIA A;  3OYD A;  3NNQ A;  1RRQ A;  4ZTJ A;  4EJZ A;  4B21 A;  3L2R A;  4EA5 A;  4UNF A;  1KG4 A;  1LWV A;  4BE2 A;  3OYN A;  4ZTF A;  3OGD A;  1MUD A;  4E9H A;  3S3N A;  1PU6 A;  2YG9 A;  4E7J A;  4E7I A;  3OYG A;  4NZG A;  3FHF A;  2JG6 A;  3L2U A;  2NOB A;  2V75 A;  1EBM A;  3FSP A;  3OS2 A;  2NOI A;  2NOZ A;  3OH6 A;  3S3O A;  3OYB A;  4BAC A;  1M3Q A;  1N3C A;  1KO9 A;  1KG2 A;  3CWA A;  1XQO A;  3OYF A;  4E9F A;  3R2X C;  1KEA A;  1WEG A;  1PVS A;  3N5N X;  5KN9 A;  1HU0 A;  4EA4 A;  1KG7 A;  1P59 A;  1LWW A;  4EW4 A;  1VRL A;  3OYL A;  4E7K A;  4YOQ A;  3IH7 A;  2ABK A; 
#chains in the Genus database with same CATH homology
 3R2X C;  1U84 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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