3SQJA

Recombinant human serum albumin from transgenic plant
Total Genus 230
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
230
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Large-scale production of functional human serum albumin from transgenic rice seeds.
pubmed doi rcsb
molecule keywords Serum albumin
molecule tags Transport protein
source organism Homo sapiens
total genus 230
structure length 582
sequence length 582
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-07-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3sqjA05
4EMXA 4LA0A 2XSIA 5ID7A 1LOTA 3V09A 1E7FA 1N5UA 4J2VA 3LU7A 1HK2A 5IJ5A 4ZBQA 3B9LA 3JRYA 5IIUA 1HA2A 2XVUA 4LUHA 1E7IA 2VUFA 4L9QA 2BXAA 1HK3A 1MA9A 2VDBA 1BM0A 4L8UA 5IFOA 2BXBA 5ID9A 3LU8A 2BX8A 1UORA 5FUOA 2BXDA 2BXGA 4IW1A 1BKEA 5IJEA 4HGMB 4OT2A 5IJFA 1AO6A 2BXEA 4K71A 2BXPA 5DQFA 4N0FD 3SQJA 4LUFA 1HK4A 2BXLA 4F5SA 1KXPD 4PO0A 2I2ZA 2XW1A 2BXCA 3B9MA 4G03A 1E78A 2BXNA 1KW2A 2XVWA 1GNIA 2XVVA 1E7CA 3JQZA 5DBYA 4LB9A 2BXIA 2I30A 4IW2A 1E7AA 1BJ5A 2BXFA 4LB2A 4K2CA 1E7HA 3A73A 5HOZA 2XVQA 4Z69A 1HK1A 1O9XA 5IIHA 3V03A 1E7BA 2BXOA 4OR0A 4E99A 1HK5A 2BXMA 2BXHA 5GHKA 2XW0A 3V08A 3CX9A 1J78A 4L9KA 3UIVA 1TF0A 1H9ZA 2BXQA 4ZBRA 4F5VA 1E7EA 4G04A 2VUEA 3LU6A 4N0UD 3TDLA 4F5UA 4HGKA 4BKEA 1E7GA 2YDFA 2BXKA 1GNJA 1J7EA 4S1YA 4F5TA 4JK4A 5IIXA
chains in the Genus database with same CATH superfamily
4EMXA 4LA0A 2XSIA 2EFDA 2QMCA 5D7GA 5ID7A 1LOTA 3V09A 1E7FA 1N5UA 5BPKA 4J2VA 3LU7A 1H5WA 4FK5B 1HK2A 2ROHA 2LXTA 5IJ5A 4ZBQA 3B9LA 3JRYA 5IIUA 1HA2A 2AGHB 2XVUA 4LUHA 1E7IA 2K0NA 2VUFA 4L9QA 2BXAA 1HK3A 3SIUB 5B5TA 2DYMA 1VFIA 3SIVB 4OTTA 4I9OA 4GDKB 1MA9A 2VDBA 3FNMA 4Z9OA 1BM0A 3VQIA 1NT2B 4L8UA 2E0YA 5IFOA 2BXBA 5ID9A 2E0XA 3LU8A 2BX8A 3GA9L 1UORA 2CKXA 3WHSA 5FUOA 2BXDA 1JNBA 4NAWB 2BXGA 3MHSB 4IW1A 3NVKA 1BKEA 4OTUA 5IJEA 3MHHB 3M99C 3W1SA 4HGMB 4OT2A 1FOUA 5IJFA 4C31B 1AO6A 4ZC6A 1VZSA 4D7XA 3FWBC 2BXEA 4K71A 2BXPA 3FWCC 2DYOA 5DQFA 4N0FD 3SQJA 3NVIA 4LUFA 1HK4A 4GDXA 2BXLA 4MBEC 1IJGA 4F5SA 3WHQA 3GQXA 5GINA 1KXPD 4PO0A 2V36A 2QHBA 4BY9C 2EFEA 2OZBB 2I2ZA 2XW1A 1MIYA 4GG2A 2BXCA 3A75A 3B9MA 2LXSA 1E78A 4G03A 2BXNA 1KW2A 3BPJA 2XVWA 1GNIA 3NMUA 2QM6A 2XVVA 1E7CA 3JQZA 2Z8IA 4FIPB 5DBYA 3GQUA 2NQOA 2BXIA 2I30A 4LB9A 4IW2A 1E7AA 4TQ1A 1BJ5A 4GDLB 2BXFA 4LB2A 1MUHA 2DBWA 4K2CA 2EFHA 3WHRA 1E7HA 3A73A 5HOZA 5GIPA 2XVQA 4Z69A 1HK1A 2LQHA 3H3AA 2GUTA 5GIOA 4G01A 1O9XA 5IIHA 3V03A 1E7BA 2BXOA 1MM8A 4FJCB 4OR0A 4E99A 1MIWA 1HK5A 2BXMA 2BXHA 1MIVA 4DM0A 2XMOA 5GHKA 2KWFA 2DBXA 2XW0A 3V08A 3CX9A 1J78A 3H37A 4L9KA 3UIVA 4W4UB 1MUSA 4N3ZA 1TF0A 4ZBKA 1H9ZA 2BXQA 3NVMA 2Z8KA 4ZBRA 3ICXA 1KDXA 4F5VA 1E7EA 1SB0A 2LQIA 2DG5A 4G04A 3KJLA 4WA6B 2VUEA 3LU6A 4N0UD 3TDLA 2KBZA 4M70B 2EFCA 4F5UA 3PLAA 1TXUA 4HGKA 1E7GA 2YDFA 4ZCGA 4BKEA 2BXKA 2JUHA 1GNJA 2Z8JA 1J7EA 2AJEA 4S1YA 4TQ0A 2DBUA 4F5TA 3KIKA 4JK4A 2NNWA 2OT3A 3G9KD 4DHXB 5IIXA 4ZUXV 3ECPA 1LNSA 2LOQA
chains in the Genus database with same CATH topology
4EMXA 4LA0A 2XSIA 2EFDA 2QMCA 5D7GA 5ID7A 1LOTA 3V09A 1E7FA 1N5UA 5BPKA 4J2VA 3LU7A 1H5WA 4FK5B 1HK2A 2ROHA 5IJ5A 4ZBQA 3B9LA 3JRYA 5IIUA 1HA2A 2XVUA 4LUHA 1E7IA 2VUFA 4L9QA 3SIUB 2BXAA 1HK3A 5B5TA 2DYMA 1VFIA 3SIVB 4OTTA 4GDKB 1MA9A 2VDBA 3FNMA 4Z9OA 1BM0A 3VQIA 1NT2B 4L8UA 2E0YA 5IFOA 2BXBA 5ID9A 2E0XA 3LU8A 2BX8A 3GA9L 1UORA 2CKXA 3WHSA 5FUOA 2BXDA 1JNBA 4NAWB 2BXGA 3MHSB 4IW1A 3NVKA 1BKEA 4OTUA 5IJEA 3MHHB 3M99C 3W1SA 4HGMB 4OT2A 1FOUA 5IJFA 4C31B 1AO6A 4ZC6A 1VZSA 3FWBC 2BXEA 4K71A 2BXPA 3FWCC 2DYOA 5DQFA 4N0FD 3SQJA 3NVIA 4LUFA 1HK4A 4GDXA 2BXLA 4MBEC 1IJGA 4F5SA 3WHQA 3GQXA 5GINA 1KXPD 4PO0A 2V36A 2QHBA 4BY9C 2EFEA 2OZBB 2I2ZA 2XW1A 1MIYA 4GG2A 2BXCA 3A75A 3B9MA 4G03A 1E78A 2BXNA 1KW2A 2XVWA 1GNIA 3NMUA 2QM6A 2XVVA 1E7CA 3JQZA 2Z8IA 4FIPB 5DBYA 3GQUA 2NQOA 2BXIA 2I30A 4LB9A 4IW2A 1E7AA 4TQ1A 1BJ5A 4GDLB 2BXFA 4LB2A 2DBWA 4K2CA 2EFHA 3WHRA 1E7HA 3A73A 5HOZA 5GIPA 2XVQA 4Z69A 1HK1A 3H3AA 5GIOA 4G01A 1O9XA 5IIHA 3V03A 1E7BA 2BXOA 4FJCB 4OR0A 4E99A 1MIWA 1HK5A 2BXMA 2BXHA 1MIVA 2XMOA 5GHKA 2DBXA 2XW0A 3V08A 3CX9A 1J78A 3H37A 4L9KA 3UIVA 4W4UB 4N3ZA 1TF0A 4ZBKA 1H9ZA 2BXQA 3NVMA 2Z8KA 4ZBRA 3ICXA 4F5VA 1E7EA 2DG5A 4G04A 3KJLA 4WA6B 2VUEA 3LU6A 4N0UD 3TDLA 2KBZA 4M70B 2EFCA 4F5UA 3PLAA 1TXUA 4HGKA 1E7GA 2YDFA 4ZCGA 4BKEA 2BXKA 2JUHA 1GNJA 2Z8JA 1J7EA 2AJEA 4S1YA 4TQ0A 2DBUA 4F5TA 3KIKA 4JK4A 2NNWA 2OT3A 3G9KD 4DHXB 5IIXA 4ZUXV 1LNSA 2LOQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EMX A;  4LA0 A;  2XSI A;  5ID7 A;  1LOT A;  3V09 A;  1E7F A;  1N5U A;  4J2V A;  3LU7 A;  1HK2 A;  5IJ5 A;  4ZBQ A;  3B9L A;  3JRY A;  5IIU A;  1HA2 A;  2XVU A;  4LUH A;  1E7I A;  2VUF A;  4L9Q A;  2BXA A;  1HK3 A;  1MA9 A;  2VDB A;  1BM0 A;  4L8U A;  5IFO A;  2BXB A;  5ID9 A;  3LU8 A;  2BX8 A;  1UOR A;  5FUO A;  2BXD A;  2BXG A;  4IW1 A;  1BKE A;  5IJE A;  4HGM B;  4OT2 A;  5IJF A;  1AO6 A;  2BXE A;  4K71 A;  2BXP A;  5DQF A;  4N0F D;  3SQJ A;  4LUF A;  1HK4 A;  2BXL A;  4F5S A;  1KXP D;  4PO0 A;  2I2Z A;  2XW1 A;  2BXC A;  3B9M A;  4G03 A;  1E78 A;  2BXN A;  1KW2 A;  2XVW A;  1GNI A;  2XVV A;  1E7C A;  3JQZ A;  5DBY A;  4LB9 A;  2BXI A;  2I30 A;  4IW2 A;  1E7A A;  1BJ5 A;  2BXF A;  4LB2 A;  4K2C A;  1E7H A;  3A73 A;  5HOZ A;  2XVQ A;  4Z69 A;  1HK1 A;  1O9X A;  5IIH A;  3V03 A;  1E7B A;  2BXO A;  4OR0 A;  4E99 A;  1HK5 A;  2BXM A;  2BXH A;  5GHK A;  2XW0 A;  3V08 A;  3CX9 A;  1J78 A;  4L9K A;  3UIV A;  1TF0 A;  1H9Z A;  2BXQ A;  4ZBR A;  4F5V A;  1E7E A;  4G04 A;  2VUE A;  3LU6 A;  4N0U D;  3TDL A;  4F5U A;  4HGK A;  4BKE A;  1E7G A;  2YDF A;  2BXK A;  1GNJ A;  1J7E A;  4S1Y A;  4F5T A;  4JK4 A;  5IIX A; 
#chains in the Genus database with same CATH topology
 4EMX A;  4LA0 A;  2XSI A;  2EFD A;  2QMC A;  5D7G A;  5ID7 A;  1LOT A;  3V09 A;  1E7F A;  1N5U A;  5BPK A;  4J2V A;  3LU7 A;  1H5W A;  4FK5 B;  1HK2 A;  2ROH A;  2LXT A;  5IJ5 A;  4ZBQ A;  3B9L A;  3JRY A;  5IIU A;  1HA2 A;  2AGH B;  2XVU A;  4LUH A;  1E7I A;  2K0N A;  2VUF A;  4L9Q A;  2BXA A;  1HK3 A;  3SIU B;  5B5T A;  2DYM A;  1VFI A;  3SIV B;  4OTT A;  4I9O A;  4GDK B;  1MA9 A;  2VDB A;  3FNM A;  4Z9O A;  1BM0 A;  3VQI A;  1NT2 B;  4L8U A;  2E0Y A;  5IFO A;  2BXB A;  5ID9 A;  2E0X A;  3LU8 A;  2BX8 A;  3GA9 L;  1UOR A;  2CKX A;  3WHS A;  5FUO A;  2BXD A;  1JNB A;  4NAW B;  2BXG A;  3MHS B;  4IW1 A;  3NVK A;  1BKE A;  4OTU A;  5IJE A;  3MHH B;  3M99 C;  3W1S A;  4HGM B;  4OT2 A;  1FOU A;  5IJF A;  4C31 B;  1AO6 A;  4ZC6 A;  1VZS A;  4D7X A;  3FWB C;  2BXE A;  4K71 A;  2BXP A;  3FWC C;  2DYO A;  5DQF A;  4N0F D;  3SQJ A;  3NVI A;  4LUF A;  1HK4 A;  4GDX A;  2BXL A;  4MBE C;  1IJG A;  4F5S A;  3WHQ A;  3GQX A;  5GIN A;  1KXP D;  4PO0 A;  2V36 A;  2QHB A;  4BY9 C;  2EFE A;  2OZB B;  2I2Z A;  2XW1 A;  1MIY A;  4GG2 A;  2BXC A;  3A75 A;  3B9M A;  2LXS A;  1E78 A;  4G03 A;  2BXN A;  1KW2 A;  3BPJ A;  2XVW A;  1GNI A;  3NMU A;  2QM6 A;  2XVV A;  1E7C A;  3JQZ A;  2Z8I A;  4FIP B;  5DBY A;  3GQU A;  2NQO A;  2BXI A;  2I30 A;  4LB9 A;  4IW2 A;  1E7A A;  4TQ1 A;  1BJ5 A;  4GDL B;  2BXF A;  4LB2 A;  1MUH A;  2DBW A;  4K2C A;  2EFH A;  3WHR A;  1E7H A;  3A73 A;  5HOZ A;  5GIP A;  2XVQ A;  4Z69 A;  1HK1 A;  2LQH A;  3H3A A;  2GUT A;  5GIO A;  4G01 A;  1O9X A;  5IIH A;  3V03 A;  1E7B A;  2BXO A;  1MM8 A;  4FJC B;  4OR0 A;  4E99 A;  1MIW A;  1HK5 A;  2BXM A;  2BXH A;  1MIV A;  4DM0 A;  2XMO A;  5GHK A;  2KWF A;  2DBX A;  2XW0 A;  3V08 A;  3CX9 A;  1J78 A;  3H37 A;  4L9K A;  3UIV A;  4W4U B;  1MUS A;  4N3Z A;  1TF0 A;  4ZBK A;  1H9Z A;  2BXQ A;  3NVM A;  2Z8K A;  4ZBR A;  3ICX A;  1KDX A;  4F5V A;  1E7E A;  1SB0 A;  2LQI A;  2DG5 A;  4G04 A;  3KJL A;  4WA6 B;  2VUE A;  3LU6 A;  4N0U D;  3TDL A;  2KBZ A;  4M70 B;  2EFC A;  4F5U A;  3PLA A;  1TXU A;  4HGK A;  1E7G A;  2YDF A;  4ZCG A;  4BKE A;  2BXK A;  2JUH A;  1GNJ A;  2Z8J A;  1J7E A;  2AJE A;  4S1Y A;  4TQ0 A;  2DBU A;  4F5T A;  3KIK A;  4JK4 A;  2NNW A;  2OT3 A;  3G9K D;  4DHX B;  5IIX A;  4ZUX V;  3ECP A;  1LNS A;  2LOQ A; 
#chains in the Genus database with same CATH homology
 4EMX A;  4LA0 A;  2XSI A;  2EFD A;  2QMC A;  5D7G A;  5ID7 A;  1LOT A;  3V09 A;  1E7F A;  1N5U A;  5BPK A;  4J2V A;  3LU7 A;  1H5W A;  4FK5 B;  1HK2 A;  2ROH A;  5IJ5 A;  4ZBQ A;  3B9L A;  3JRY A;  5IIU A;  1HA2 A;  2XVU A;  4LUH A;  1E7I A;  2VUF A;  4L9Q A;  3SIU B;  2BXA A;  1HK3 A;  5B5T A;  2DYM A;  1VFI A;  3SIV B;  4OTT A;  4GDK B;  1MA9 A;  2VDB A;  3FNM A;  4Z9O A;  1BM0 A;  3VQI A;  1NT2 B;  4L8U A;  2E0Y A;  5IFO A;  2BXB A;  5ID9 A;  2E0X A;  3LU8 A;  2BX8 A;  3GA9 L;  1UOR A;  2CKX A;  3WHS A;  5FUO A;  2BXD A;  1JNB A;  4NAW B;  2BXG A;  3MHS B;  4IW1 A;  3NVK A;  1BKE A;  4OTU A;  5IJE A;  3MHH B;  3M99 C;  3W1S A;  4HGM B;  4OT2 A;  1FOU A;  5IJF A;  4C31 B;  1AO6 A;  4ZC6 A;  1VZS A;  3FWB C;  2BXE A;  4K71 A;  2BXP A;  3FWC C;  2DYO A;  5DQF A;  4N0F D;  3SQJ A;  3NVI A;  4LUF A;  1HK4 A;  4GDX A;  2BXL A;  4MBE C;  1IJG A;  4F5S A;  3WHQ A;  3GQX A;  5GIN A;  1KXP D;  4PO0 A;  2V36 A;  2QHB A;  4BY9 C;  2EFE A;  2OZB B;  2I2Z A;  2XW1 A;  1MIY A;  4GG2 A;  2BXC A;  3A75 A;  3B9M A;  4G03 A;  1E78 A;  2BXN A;  1KW2 A;  2XVW A;  1GNI A;  3NMU A;  2QM6 A;  2XVV A;  1E7C A;  3JQZ A;  2Z8I A;  4FIP B;  5DBY A;  3GQU A;  2NQO A;  2BXI A;  2I30 A;  4LB9 A;  4IW2 A;  1E7A A;  4TQ1 A;  1BJ5 A;  4GDL B;  2BXF A;  4LB2 A;  2DBW A;  4K2C A;  2EFH A;  3WHR A;  1E7H A;  3A73 A;  5HOZ A;  5GIP A;  2XVQ A;  4Z69 A;  1HK1 A;  3H3A A;  5GIO A;  4G01 A;  1O9X A;  5IIH A;  3V03 A;  1E7B A;  2BXO A;  4FJC B;  4OR0 A;  4E99 A;  1MIW A;  1HK5 A;  2BXM A;  2BXH A;  1MIV A;  2XMO A;  5GHK A;  2DBX A;  2XW0 A;  3V08 A;  3CX9 A;  1J78 A;  3H37 A;  4L9K A;  3UIV A;  4W4U B;  4N3Z A;  1TF0 A;  4ZBK A;  1H9Z A;  2BXQ A;  3NVM A;  2Z8K A;  4ZBR A;  3ICX A;  4F5V A;  1E7E A;  2DG5 A;  4G04 A;  3KJL A;  4WA6 B;  2VUE A;  3LU6 A;  4N0U D;  3TDL A;  2KBZ A;  4M70 B;  2EFC A;  4F5U A;  3PLA A;  1TXU A;  4HGK A;  1E7G A;  2YDF A;  4ZCG A;  4BKE A;  2BXK A;  2JUH A;  1GNJ A;  2Z8J A;  1J7E A;  2AJE A;  4S1Y A;  4TQ0 A;  2DBU A;  4F5T A;  3KIK A;  4JK4 A;  2NNW A;  2OT3 A;  3G9K D;  4DHX B;  5IIX A;  4ZUX V;  1LNS A;  2LOQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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