3V03A

Crystal structure of bovine serum albumin
Total Genus 225
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
225
sequence length
581
structure length
581
Chain Sequence
HKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
pubmed doi rcsb
total genus 225
structure length 581
sequence length 581
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-12-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v03A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v03A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v03A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v03A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v03A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v03A05
1BJ5A 2BXAA 2VDBA 5GHKA 1H9ZA 2XW0A 2BXBA 5FUOA 4LUFA 3LU7A 2BXHA 4N0FD 1N5UA 1E7GA 5IIHA 2BXFA 5DQFA 2XSIA 5IJEA 1HA2A 1GNIA 4F5SA 1TF0A 5ID9A 1AO6A 3JQZA 4F5TA 2BXMA 1O9XA 2XW1A 5ID7A 2BXGA 5DBYA 2BXDA 4F5UA 1E7BA 4ZBRA 2BXEA 4G04A 1E7CA 2XVUA 2BXNA 4LB9A 1UORA 1HK3A 4N0UD 3LU6A 1HK2A 4LA0A 5HOZA 4BKEA 1J78A 2BXQA 3V03A 4LB2A 2VUFA 3TDLA 3V08A 4HGKA 3UIVA 4JK4A 2BX8A 2BXOA 3CX9A 1MA9A 1KXPD 3SQJA 4K2CA 2BXPA 2BXIA 1E7EA 1E7HA 4L9QA 1BM0A 4L9KA 1HK4A 4OT2A 5IIUA 1E7FA 2BXCA 3JRYA 2XVWA 4F5VA 2BXLA 3A73A 5IJ5A 4L8UA 4Z69A 5IFOA 4IW1A 4E99A 1BKEA 2XVQA 4J2VA 2YDFA 4EMXA 4OR0A 3B9LA 1GNJA 2I30A 4ZBQA 4G03A 1HK1A 4LUHA 2I2ZA 1HK5A 3LU8A 4S1YA 3V09A 1E7AA 1E7IA 2BXKA 1E78A 4PO0A 1J7EA 2VUEA 1KW2A 5IJFA 2XVVA 4HGMB 4IW2A 4K71A 3B9MA 5IIXA 1LOTA
chains in the Genus database with same CATH superfamily
1BJ5A 2BXAA 2VDBA 2V36A 2DYOA 3A75A 1H9ZA 5GHKA 1IJGA 2BXBA 2XW0A 5FUOA 4LUFA 3GQXA 3LU7A 3BPJA 3GA9L 4TQ0A 1MM8A 2BXHA 2DBUA 2JUHA 2LQIA 4FJCB 1KDXA 2E0XA 2KBZA 1N5UA 4N0FD 1E7GA 2DBWA 1FOUA 4NAWB 5IIHA 4OTUA 2BXFA 5DQFA 2XSIA 5IJEA 1HA2A 4GDLB 3NVKA 3H37A 1GNIA 4F5SA 1SB0A 1TF0A 4ZCGA 5ID9A 1AO6A 3JQZA 4F5TA 2BXMA 3W1SA 3MHSB 1O9XA 2XW1A 5ID7A 2BXGA 5DBYA 2BXDA 2QHBA 4F5UA 4N3ZA 1E7BA 4ZBRA 2BXEA 4G04A 4I9OA 4FIPB 4WA6B 1E7CA 2XVUA 2BXNA 3FWBC 4LB9A 1UORA 1HK3A 4N0UD 3LU6A 5GINA 2AGHB 5GIOA 1HK2A 2EFEA 4FK5B 3G9KD 4LA0A 5HOZA 3WHQA 3H3AA 4BKEA 3M99C 4GG2A 1VFIA 1J78A 4GDKB 4W4UB 2BXQA 2DBXA 2NNWA 3V03A 1VZSA 4LB2A 2VUFA 3TDLA 2LQHA 4MBEC 4HGKA 3V08A 1JNBA 3UIVA 2E0YA 2Z8IA 3FWCC 4JK4A 2BX8A 2BXOA 3ICXA 3CX9A 1MA9A 2LXTA 2KWFA 1KXPD 3MHHB 3SQJA 4BY9C 4K2CA 2BXPA 2BXIA 5BPKA 5B5TA 1E7EA 2ROHA 3NVMA 2LXSA 1MIWA 1E7HA 2AJEA 4L9QA 1BM0A 5GIPA 4L9KA 1MIVA 1HK4A 4OT2A 4D7XA 5IIUA 1E7FA 2BXCA 3JRYA 2XVWA 4ZC6A 4F5VA 2BXLA 4DHXB 3A73A 4ZBKA 4TQ1A 5IJ5A 3WHSA 3WHRA 4L8UA 4Z69A 3SIVB 1MUHA 4OTTA 5IFOA 4IW1A 1TXUA 2NQOA 4E99A 2EFHA 4DM0A 1BKEA 2XVQA 3FNMA 3GQUA 4J2VA 2YDFA 4C31B 4M70B 4EMXA 2OT3A 3KIKA 3B9LA 1GNJA 4GDXA 3KJLA 4OR0A 2I30A 4G01A 4ZBQA 2OZBB 3ECPA 2CKXA 4ZUXV 3SIUB 2DG5A 2EFDA 4G03A 1HK1A 1MIYA 4LUHA 2I2ZA 1HK5A 3LU8A 1MUSA 2EFCA 3VQIA 2Z8JA 1LNSA 2QMCA 4S1YA 3V09A 3NVIA 2LOQA 3NMUA 2K0NA 4Z9OA 1H5WA 1E7AA 1E7IA 2BXKA 2XMOA 2GUTA 1NT2B 1E78A 2Z8KA 4PO0A 1J7EA 2DYMA 2VUEA 1KW2A 5IJFA 2XVVA 4HGMB 4IW2A 2QM6A 4K71A 3B9MA 3PLAA 5IIXA 5D7GA 1LOTA
chains in the Genus database with same CATH topology
1BJ5A 2BXAA 2VDBA 2V36A 2DYOA 3A75A 1H9ZA 5GHKA 1IJGA 2BXBA 2XW0A 5FUOA 4LUFA 3GQXA 3LU7A 4TQ0A 3GA9L 2BXHA 2DBUA 2JUHA 4FJCB 2E0XA 2KBZA 1N5UA 4N0FD 1E7GA 2DBWA 1FOUA 4NAWB 5IIHA 4OTUA 2BXFA 5DQFA 2XSIA 5IJEA 1HA2A 4GDLB 3NVKA 3H37A 1GNIA 4F5SA 1TF0A 4ZCGA 5ID9A 1AO6A 3JQZA 4F5TA 2BXMA 3W1SA 3MHSB 1O9XA 2XW1A 5ID7A 2BXGA 5DBYA 2BXDA 2QHBA 4F5UA 4N3ZA 1E7BA 4ZBRA 2BXEA 4G04A 4FIPB 4WA6B 1E7CA 2XVUA 2BXNA 3FWBC 4LB9A 1UORA 1HK3A 4N0UD 3LU6A 5GINA 5GIOA 1HK2A 2EFEA 4FK5B 3G9KD 4LA0A 5HOZA 3WHQA 3H3AA 4BKEA 3M99C 4GG2A 1VFIA 1J78A 4GDKB 4W4UB 2BXQA 2DBXA 2NNWA 3V03A 1VZSA 4LB2A 2VUFA 3TDLA 3V08A 4MBEC 4HGKA 1JNBA 3UIVA 2E0YA 2Z8IA 3FWCC 4JK4A 2BX8A 2BXOA 3ICXA 3CX9A 1MA9A 1KXPD 3MHHB 3SQJA 4BY9C 4K2CA 2BXPA 2BXIA 5BPKA 5B5TA 1E7EA 2ROHA 3NVMA 1MIWA 1E7HA 2AJEA 4L9QA 1BM0A 5GIPA 4L9KA 1MIVA 1HK4A 4OT2A 5IIUA 1E7FA 2BXCA 3JRYA 2XVWA 4ZC6A 4F5VA 2BXLA 4DHXB 3A73A 4ZBKA 4TQ1A 5IJ5A 3WHSA 3WHRA 4L8UA 4Z69A 3SIVB 4OTTA 5IFOA 4IW1A 1TXUA 2NQOA 4E99A 2EFHA 1BKEA 2XVQA 3FNMA 3GQUA 4J2VA 2YDFA 4C31B 4M70B 4EMXA 2OT3A 3KIKA 3B9LA 1GNJA 4GDXA 3KJLA 4OR0A 2I30A 4G01A 4ZBQA 2OZBB 2CKXA 4ZUXV 3SIUB 2DG5A 2EFDA 4G03A 1HK1A 1MIYA 4LUHA 2I2ZA 1HK5A 3LU8A 2EFCA 3VQIA 2Z8JA 1LNSA 2QMCA 4S1YA 3V09A 3NVIA 2LOQA 3NMUA 4Z9OA 1H5WA 1E7AA 1E7IA 2BXKA 2XMOA 2Z8KA 1NT2B 1E78A 4PO0A 1J7EA 2DYMA 2VUEA 1KW2A 5IJFA 2XVVA 4HGMB 4IW2A 2QM6A 4K71A 3B9MA 3PLAA 5IIXA 5D7GA 1LOTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BJ5 A;  2BXA A;  2VDB A;  5GHK A;  1H9Z A;  2XW0 A;  2BXB A;  5FUO A;  4LUF A;  3LU7 A;  2BXH A;  4N0F D;  1N5U A;  1E7G A;  5IIH A;  2BXF A;  5DQF A;  2XSI A;  5IJE A;  1HA2 A;  1GNI A;  4F5S A;  1TF0 A;  5ID9 A;  1AO6 A;  3JQZ A;  4F5T A;  2BXM A;  1O9X A;  2XW1 A;  5ID7 A;  2BXG A;  5DBY A;  2BXD A;  4F5U A;  1E7B A;  4ZBR A;  2BXE A;  4G04 A;  1E7C A;  2XVU A;  2BXN A;  4LB9 A;  1UOR A;  1HK3 A;  4N0U D;  3LU6 A;  1HK2 A;  4LA0 A;  5HOZ A;  4BKE A;  1J78 A;  2BXQ A;  3V03 A;  4LB2 A;  2VUF A;  3TDL A;  3V08 A;  4HGK A;  3UIV A;  4JK4 A;  2BX8 A;  2BXO A;  3CX9 A;  1MA9 A;  1KXP D;  3SQJ A;  4K2C A;  2BXP A;  2BXI A;  1E7E A;  1E7H A;  4L9Q A;  1BM0 A;  4L9K A;  1HK4 A;  4OT2 A;  5IIU A;  1E7F A;  2BXC A;  3JRY A;  2XVW A;  4F5V A;  2BXL A;  3A73 A;  5IJ5 A;  4L8U A;  4Z69 A;  5IFO A;  4IW1 A;  4E99 A;  1BKE A;  2XVQ A;  4J2V A;  2YDF A;  4EMX A;  4OR0 A;  3B9L A;  1GNJ A;  2I30 A;  4ZBQ A;  4G03 A;  1HK1 A;  4LUH A;  2I2Z A;  1HK5 A;  3LU8 A;  4S1Y A;  3V09 A;  1E7A A;  1E7I A;  2BXK A;  1E78 A;  4PO0 A;  1J7E A;  2VUE A;  1KW2 A;  5IJF A;  2XVV A;  4HGM B;  4IW2 A;  4K71 A;  3B9M A;  5IIX A;  1LOT A; 
#chains in the Genus database with same CATH topology
 1BJ5 A;  2BXA A;  2VDB A;  2V36 A;  2DYO A;  3A75 A;  1H9Z A;  5GHK A;  1IJG A;  2BXB A;  2XW0 A;  5FUO A;  4LUF A;  3GQX A;  3LU7 A;  3BPJ A;  3GA9 L;  4TQ0 A;  1MM8 A;  2BXH A;  2DBU A;  2JUH A;  2LQI A;  4FJC B;  1KDX A;  2E0X A;  2KBZ A;  1N5U A;  4N0F D;  1E7G A;  2DBW A;  1FOU A;  4NAW B;  5IIH A;  4OTU A;  2BXF A;  5DQF A;  2XSI A;  5IJE A;  1HA2 A;  4GDL B;  3NVK A;  3H37 A;  1GNI A;  4F5S A;  1SB0 A;  1TF0 A;  4ZCG A;  5ID9 A;  1AO6 A;  3JQZ A;  4F5T A;  2BXM A;  3W1S A;  3MHS B;  1O9X A;  2XW1 A;  5ID7 A;  2BXG A;  5DBY A;  2BXD A;  2QHB A;  4F5U A;  4N3Z A;  1E7B A;  4ZBR A;  2BXE A;  4G04 A;  4I9O A;  4FIP B;  4WA6 B;  1E7C A;  2XVU A;  2BXN A;  3FWB C;  4LB9 A;  1UOR A;  1HK3 A;  4N0U D;  3LU6 A;  5GIN A;  2AGH B;  5GIO A;  1HK2 A;  2EFE A;  4FK5 B;  3G9K D;  4LA0 A;  5HOZ A;  3WHQ A;  3H3A A;  4BKE A;  3M99 C;  4GG2 A;  1VFI A;  1J78 A;  4GDK B;  4W4U B;  2BXQ A;  2DBX A;  2NNW A;  3V03 A;  1VZS A;  4LB2 A;  2VUF A;  3TDL A;  2LQH A;  4MBE C;  4HGK A;  3V08 A;  1JNB A;  3UIV A;  2E0Y A;  2Z8I A;  3FWC C;  4JK4 A;  2BX8 A;  2BXO A;  3ICX A;  3CX9 A;  1MA9 A;  2LXT A;  2KWF A;  1KXP D;  3MHH B;  3SQJ A;  4BY9 C;  4K2C A;  2BXP A;  2BXI A;  5BPK A;  5B5T A;  1E7E A;  2ROH A;  3NVM A;  2LXS A;  1MIW A;  1E7H A;  2AJE A;  4L9Q A;  1BM0 A;  5GIP A;  4L9K A;  1MIV A;  1HK4 A;  4OT2 A;  4D7X A;  5IIU A;  1E7F A;  2BXC A;  3JRY A;  2XVW A;  4ZC6 A;  4F5V A;  2BXL A;  4DHX B;  3A73 A;  4ZBK A;  4TQ1 A;  5IJ5 A;  3WHS A;  3WHR A;  4L8U A;  4Z69 A;  3SIV B;  1MUH A;  4OTT A;  5IFO A;  4IW1 A;  1TXU A;  2NQO A;  4E99 A;  2EFH A;  4DM0 A;  1BKE A;  2XVQ A;  3FNM A;  3GQU A;  4J2V A;  2YDF A;  4C31 B;  4M70 B;  4EMX A;  2OT3 A;  3KIK A;  3B9L A;  1GNJ A;  4GDX A;  3KJL A;  4OR0 A;  2I30 A;  4G01 A;  4ZBQ A;  2OZB B;  3ECP A;  2CKX A;  4ZUX V;  3SIU B;  2DG5 A;  2EFD A;  4G03 A;  1HK1 A;  1MIY A;  4LUH A;  2I2Z A;  1HK5 A;  3LU8 A;  1MUS A;  2EFC A;  3VQI A;  2Z8J A;  1LNS A;  2QMC A;  4S1Y A;  3V09 A;  3NVI A;  2LOQ A;  3NMU A;  2K0N A;  4Z9O A;  1H5W A;  1E7A A;  1E7I A;  2BXK A;  2XMO A;  2GUT A;  1NT2 B;  1E78 A;  2Z8K A;  4PO0 A;  1J7E A;  2DYM A;  2VUE A;  1KW2 A;  5IJF A;  2XVV A;  4HGM B;  4IW2 A;  2QM6 A;  4K71 A;  3B9M A;  3PLA A;  5IIX A;  5D7G A;  1LOT A; 
#chains in the Genus database with same CATH homology
 1BJ5 A;  2BXA A;  2VDB A;  2V36 A;  2DYO A;  3A75 A;  1H9Z A;  5GHK A;  1IJG A;  2BXB A;  2XW0 A;  5FUO A;  4LUF A;  3GQX A;  3LU7 A;  4TQ0 A;  3GA9 L;  2BXH A;  2DBU A;  2JUH A;  4FJC B;  2E0X A;  2KBZ A;  1N5U A;  4N0F D;  1E7G A;  2DBW A;  1FOU A;  4NAW B;  5IIH A;  4OTU A;  2BXF A;  5DQF A;  2XSI A;  5IJE A;  1HA2 A;  4GDL B;  3NVK A;  3H37 A;  1GNI A;  4F5S A;  1TF0 A;  4ZCG A;  5ID9 A;  1AO6 A;  3JQZ A;  4F5T A;  2BXM A;  3W1S A;  3MHS B;  1O9X A;  2XW1 A;  5ID7 A;  2BXG A;  5DBY A;  2BXD A;  2QHB A;  4F5U A;  4N3Z A;  1E7B A;  4ZBR A;  2BXE A;  4G04 A;  4FIP B;  4WA6 B;  1E7C A;  2XVU A;  2BXN A;  3FWB C;  4LB9 A;  1UOR A;  1HK3 A;  4N0U D;  3LU6 A;  5GIN A;  5GIO A;  1HK2 A;  2EFE A;  4FK5 B;  3G9K D;  4LA0 A;  5HOZ A;  3WHQ A;  3H3A A;  4BKE A;  3M99 C;  4GG2 A;  1VFI A;  1J78 A;  4GDK B;  4W4U B;  2BXQ A;  2DBX A;  2NNW A;  3V03 A;  1VZS A;  4LB2 A;  2VUF A;  3TDL A;  3V08 A;  4MBE C;  4HGK A;  1JNB A;  3UIV A;  2E0Y A;  2Z8I A;  3FWC C;  4JK4 A;  2BX8 A;  2BXO A;  3ICX A;  3CX9 A;  1MA9 A;  1KXP D;  3MHH B;  3SQJ A;  4BY9 C;  4K2C A;  2BXP A;  2BXI A;  5BPK A;  5B5T A;  1E7E A;  2ROH A;  3NVM A;  1MIW A;  1E7H A;  2AJE A;  4L9Q A;  1BM0 A;  5GIP A;  4L9K A;  1MIV A;  1HK4 A;  4OT2 A;  5IIU A;  1E7F A;  2BXC A;  3JRY A;  2XVW A;  4ZC6 A;  4F5V A;  2BXL A;  4DHX B;  3A73 A;  4ZBK A;  4TQ1 A;  5IJ5 A;  3WHS A;  3WHR A;  4L8U A;  4Z69 A;  3SIV B;  4OTT A;  5IFO A;  4IW1 A;  1TXU A;  2NQO A;  4E99 A;  2EFH A;  1BKE A;  2XVQ A;  3FNM A;  3GQU A;  4J2V A;  2YDF A;  4C31 B;  4M70 B;  4EMX A;  2OT3 A;  3KIK A;  3B9L A;  1GNJ A;  4GDX A;  3KJL A;  4OR0 A;  2I30 A;  4G01 A;  4ZBQ A;  2OZB B;  2CKX A;  4ZUX V;  3SIU B;  2DG5 A;  2EFD A;  4G03 A;  1HK1 A;  1MIY A;  4LUH A;  2I2Z A;  1HK5 A;  3LU8 A;  2EFC A;  3VQI A;  2Z8J A;  1LNS A;  2QMC A;  4S1Y A;  3V09 A;  3NVI A;  2LOQ A;  3NMU A;  4Z9O A;  1H5W A;  1E7A A;  1E7I A;  2BXK A;  2XMO A;  2Z8K A;  1NT2 B;  1E78 A;  4PO0 A;  1J7E A;  2DYM A;  2VUE A;  1KW2 A;  5IJF A;  2XVV A;  4HGM B;  4IW2 A;  2QM6 A;  4K71 A;  3B9M A;  3PLA A;  5IIX A;  5D7G A;  1LOT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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