3V08A

Crystal structure of equine serum albumin
Total Genus 235
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
235
sequence length
581
structure length
581
Chain Sequence
HKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Serum albumin
publication title Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
pubmed doi rcsb
total genus 235
structure length 581
sequence length 581
ec nomenclature
pdb deposition date 2011-12-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v08A05
3B9MA 1BKEA 4L8UA 4PO0A 2VDBA 5HOZA 5IIXA 4EMXA 4IW1A 1HK4A 4K2CA 3SQJA 4LB9A 3JRYA 2BXCA 1BJ5A 5DQFA 5IIUA 5ID7A 2BXGA 2BXAA 1J78A 4ZBQA 2BXPA 3JQZA 4F5SA 2BXDA 1HA2A 1HK1A 4Z69A 1J7EA 1H9ZA 4J2VA 5ID9A 3LU8A 3TDLA 4E99A 2I30A 2VUFA 1AO6A 2XW1A 3CX9A 1E7CA 2BXNA 3V08A 1E78A 4OT2A 2XVUA 3B9LA 4LUFA 5IJ5A 1HK5A 1KW2A 1E7FA 1N5UA 5FUOA 1E7BA 4LB2A 1GNJA 3LU7A 1MA9A 4OR0A 2XSIA 1KXPD 2BXKA 2BXEA 2BXOA 4LUHA 4BKEA 1E7IA 5IJEA 1E7AA 2VUEA 2BXFA 4K71A 3V03A 1LOTA 4F5VA 2BXLA 5IFOA 1E7HA 2XVQA 1HK2A 2I2ZA 3V09A 2YDFA 4F5TA 2BXMA 1BM0A 4LA0A 4HGKA 1E7EA 3A73A 4IW2A 2XW0A 1E7GA 2BXIA 4G03A 4L9QA 2XVVA 1TF0A 4G04A 4L9KA 2XVWA 4S1YA 5DBYA 4N0FD 3UIVA 4HGMB 4N0UD 4ZBRA 2BXHA 1HK3A 2BX8A 2BXQA 1GNIA 2BXBA 5IIHA 5IJFA 5GHKA 1O9XA 1UORA 4JK4A 4F5UA 3LU6A
chains in the Genus database with same CATH superfamily
3B9MA 3M99C 1BKEA 4L8UA 4WA6B 4PO0A 2VDBA 5HOZA 4OTUA 5IIXA 4DHXB 2QM6A 4EMXA 3A75A 4IW1A 1HK4A 4K2CA 3WHRA 3SQJA 4LB9A 4GDLB 3JRYA 4I9OA 2BXCA 1BJ5A 5DQFA 2LQIA 5IIUA 2EFEA 2DYMA 5ID7A 4C31B 2AJEA 5GIOA 2BXGA 2BXAA 2DYOA 1J78A 4ZBQA 2BXPA 3JQZA 4D7XA 4F5SA 2BXDA 1HA2A 1HK1A 4Z69A 1J7EA 3WHSA 1NT2B 1H9ZA 1MM8A 2KBZA 4J2VA 5ID9A 3LU8A 3TDLA 4N3ZA 1SB0A 4E99A 3H37A 2XMOA 4OTTA 2I30A 4M70B 2EFDA 2NQOA 2VUFA 2JUHA 1AO6A 2XW1A 5GINA 3CX9A 1E7CA 2BXNA 3V08A 1E78A 3VQIA 4OT2A 2XVUA 4MBEC 1H5WA 3B9LA 2DBWA 4LUFA 5IJ5A 1HK5A 1KW2A 3G9KD 4Z9OA 1E7FA 2LXSA 1N5UA 5FUOA 3KJLA 1E7BA 4LB2A 1GNJA 3LU7A 1MA9A 4OR0A 2AGHB 3KIKA 1MUHA 2XSIA 3H3AA 1KXPD 1IJGA 2BXKA 2BXEA 2BXOA 4LUHA 4BKEA 1KDXA 4W4UB 1E7IA 5IJEA 1E7AA 3NVMA 2VUEA 4ZBKA 2BXFA 4K71A 1MUSA 3V03A 2NNWA 4FK5B 1LOTA 4BY9C 1LNSA 3MHSB 2Z8IA 5B5TA 2OZBB 4F5VA 3FNMA 3NVIA 3SIUB 2BXLA 2Z8JA 5IFOA 2OT3A 2ROHA 1E7HA 4FJCB 2XVQA 1HK2A 2I2ZA 1VZSA 3V09A 2YDFA 3FWBC 5D7GA 1MIYA 4ZCGA 1MIVA 4TQ1A 4ZC6A 4F5TA 2BXMA 1BM0A 2KWFA 3FWCC 2LXTA 4G01A 3BPJA 2DG5A 1JNBA 3ICXA 2LOQA 4HGKA 1E7EA 3A73A 4IW2A 2XW0A 1E7GA 2BXIA 3WHQA 4G03A 4GDXA 1FOUA 2CKXA 2XVVA 4L9QA 5GIPA 1TF0A 2Z8KA 4G04A 2DBXA 2GUTA 2XVWA 4L9KA 3W1SA 3GQUA 2EFCA 4DM0A 4S1YA 3MHHB 3PLAA 5DBYA 4N0FD 1MIWA 1TXUA 3GA9L 3UIVA 4HGMB 3NMUA 4N0UD 4TQ0A 2E0XA 4ZBRA 2BXHA 3ECPA 1HK3A 1VFIA 2BX8A 2BXQA 2V36A 2EFHA 4ZUXV 2E0YA 3SIVB 2LQHA 1GNIA 4FIPB 2BXBA 3NVKA 3LU6A 5BPKA 4LA0A 5IIHA 5IJFA 4GDKB 5GHKA 1O9XA 3GQXA 4GG2A 2QMCA 1UORA 4JK4A 4F5UA 2K0NA 4NAWB 2DBUA 2QHBA
chains in the Genus database with same CATH topology
3B9MA 3M99C 1BKEA 4L8UA 4WA6B 4PO0A 2VDBA 5HOZA 4OTUA 5IIXA 4DHXB 2QM6A 4EMXA 3A75A 4IW1A 1HK4A 4K2CA 3WHRA 3SQJA 4LB9A 4GDLB 3JRYA 2BXCA 1BJ5A 5DQFA 5IIUA 2EFEA 2DYMA 5ID7A 4C31B 2AJEA 5GIOA 2BXGA 2BXAA 2DYOA 1J78A 4ZBQA 2BXPA 3JQZA 4F5SA 2BXDA 1HA2A 1HK1A 4Z69A 1J7EA 3WHSA 1NT2B 1H9ZA 2KBZA 4J2VA 5ID9A 3LU8A 3TDLA 4N3ZA 4E99A 3H37A 2XMOA 4OTTA 2I30A 4M70B 2EFDA 2NQOA 2VUFA 2JUHA 1AO6A 2XW1A 5GINA 3CX9A 1E7CA 2BXNA 3V08A 1E78A 3VQIA 4OT2A 2XVUA 4MBEC 1H5WA 3B9LA 2DBWA 4LUFA 5IJ5A 1HK5A 1KW2A 3G9KD 4Z9OA 1E7FA 1N5UA 5FUOA 3KJLA 1E7BA 4LB2A 1GNJA 3LU7A 1MA9A 4OR0A 3KIKA 2XSIA 3H3AA 1KXPD 1IJGA 2BXKA 2BXEA 2BXOA 4LUHA 4BKEA 4W4UB 1E7IA 5IJEA 1E7AA 3NVMA 2VUEA 4ZBKA 2BXFA 4K71A 3V03A 2NNWA 4FK5B 1LOTA 4BY9C 1LNSA 3MHSB 2Z8IA 5B5TA 2OZBB 4F5VA 3FNMA 3NVIA 3SIUB 2BXLA 2Z8JA 5IFOA 2OT3A 2ROHA 1E7HA 4FJCB 2XVQA 1HK2A 2I2ZA 1VZSA 3V09A 2YDFA 3FWBC 5D7GA 1MIYA 4ZCGA 1MIVA 4TQ1A 4ZC6A 4F5TA 2BXMA 1BM0A 3FWCC 4G01A 2DG5A 1JNBA 3ICXA 2LOQA 4HGKA 1E7EA 3A73A 4IW2A 2XW0A 1E7GA 2BXIA 3WHQA 4G03A 4GDXA 1FOUA 2CKXA 2XVVA 4L9QA 5GIPA 1TF0A 2Z8KA 4G04A 2DBXA 4L9KA 2XVWA 3W1SA 3GQUA 2EFCA 3PLAA 4S1YA 3MHHB 5DBYA 4N0FD 1MIWA 1TXUA 3GA9L 3UIVA 4HGMB 3NMUA 4N0UD 4TQ0A 2E0XA 4ZBRA 2BXHA 1HK3A 1VFIA 2BX8A 2BXQA 2V36A 2EFHA 4ZUXV 2E0YA 3SIVB 1GNIA 4FIPB 2BXBA 3NVKA 5BPKA 4LA0A 5IIHA 5IJFA 4GDKB 5GHKA 1O9XA 3GQXA 4GG2A 2QMCA 1UORA 4JK4A 4F5UA 3LU6A 4NAWB 2DBUA 2QHBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3B9M A;  1BKE A;  4L8U A;  4PO0 A;  2VDB A;  5HOZ A;  5IIX A;  4EMX A;  4IW1 A;  1HK4 A;  4K2C A;  3SQJ A;  4LB9 A;  3JRY A;  2BXC A;  1BJ5 A;  5DQF A;  5IIU A;  5ID7 A;  2BXG A;  2BXA A;  1J78 A;  4ZBQ A;  2BXP A;  3JQZ A;  4F5S A;  2BXD A;  1HA2 A;  1HK1 A;  4Z69 A;  1J7E A;  1H9Z A;  4J2V A;  5ID9 A;  3LU8 A;  3TDL A;  4E99 A;  2I30 A;  2VUF A;  1AO6 A;  2XW1 A;  3CX9 A;  1E7C A;  2BXN A;  3V08 A;  1E78 A;  4OT2 A;  2XVU A;  3B9L A;  4LUF A;  5IJ5 A;  1HK5 A;  1KW2 A;  1E7F A;  1N5U A;  5FUO A;  1E7B A;  4LB2 A;  1GNJ A;  3LU7 A;  1MA9 A;  4OR0 A;  2XSI A;  1KXP D;  2BXK A;  2BXE A;  2BXO A;  4LUH A;  4BKE A;  1E7I A;  5IJE A;  1E7A A;  2VUE A;  2BXF A;  4K71 A;  3V03 A;  1LOT A;  4F5V A;  2BXL A;  5IFO A;  1E7H A;  2XVQ A;  1HK2 A;  2I2Z A;  3V09 A;  2YDF A;  4F5T A;  2BXM A;  1BM0 A;  4LA0 A;  4HGK A;  1E7E A;  3A73 A;  4IW2 A;  2XW0 A;  1E7G A;  2BXI A;  4G03 A;  4L9Q A;  2XVV A;  1TF0 A;  4G04 A;  4L9K A;  2XVW A;  4S1Y A;  5DBY A;  4N0F D;  3UIV A;  4HGM B;  4N0U D;  4ZBR A;  2BXH A;  1HK3 A;  2BX8 A;  2BXQ A;  1GNI A;  2BXB A;  5IIH A;  5IJF A;  5GHK A;  1O9X A;  1UOR A;  4JK4 A;  4F5U A;  3LU6 A; 
#chains in the Genus database with same CATH topology
 3B9M A;  3M99 C;  1BKE A;  4L8U A;  4WA6 B;  4PO0 A;  2VDB A;  5HOZ A;  4OTU A;  5IIX A;  4DHX B;  2QM6 A;  4EMX A;  3A75 A;  4IW1 A;  1HK4 A;  4K2C A;  3WHR A;  3SQJ A;  4LB9 A;  4GDL B;  3JRY A;  4I9O A;  2BXC A;  1BJ5 A;  5DQF A;  2LQI A;  5IIU A;  2EFE A;  2DYM A;  5ID7 A;  4C31 B;  2AJE A;  5GIO A;  2BXG A;  2BXA A;  2DYO A;  1J78 A;  4ZBQ A;  2BXP A;  3JQZ A;  4D7X A;  4F5S A;  2BXD A;  1HA2 A;  1HK1 A;  4Z69 A;  1J7E A;  3WHS A;  1NT2 B;  1H9Z A;  1MM8 A;  2KBZ A;  4J2V A;  5ID9 A;  3LU8 A;  3TDL A;  4N3Z A;  1SB0 A;  4E99 A;  3H37 A;  2XMO A;  4OTT A;  2I30 A;  4M70 B;  2EFD A;  2NQO A;  2VUF A;  2JUH A;  1AO6 A;  2XW1 A;  5GIN A;  3CX9 A;  1E7C A;  2BXN A;  3V08 A;  1E78 A;  3VQI A;  4OT2 A;  2XVU A;  4MBE C;  1H5W A;  3B9L A;  2DBW A;  4LUF A;  5IJ5 A;  1HK5 A;  1KW2 A;  3G9K D;  4Z9O A;  1E7F A;  2LXS A;  1N5U A;  5FUO A;  3KJL A;  1E7B A;  4LB2 A;  1GNJ A;  3LU7 A;  1MA9 A;  4OR0 A;  2AGH B;  3KIK A;  1MUH A;  2XSI A;  3H3A A;  1KXP D;  1IJG A;  2BXK A;  2BXE A;  2BXO A;  4LUH A;  4BKE A;  1KDX A;  4W4U B;  1E7I A;  5IJE A;  1E7A A;  3NVM A;  2VUE A;  4ZBK A;  2BXF A;  4K71 A;  1MUS A;  3V03 A;  2NNW A;  4FK5 B;  1LOT A;  4BY9 C;  1LNS A;  3MHS B;  2Z8I A;  5B5T A;  2OZB B;  4F5V A;  3FNM A;  3NVI A;  3SIU B;  2BXL A;  2Z8J A;  5IFO A;  2OT3 A;  2ROH A;  1E7H A;  4FJC B;  2XVQ A;  1HK2 A;  2I2Z A;  1VZS A;  3V09 A;  2YDF A;  3FWB C;  5D7G A;  1MIY A;  4ZCG A;  1MIV A;  4TQ1 A;  4ZC6 A;  4F5T A;  2BXM A;  1BM0 A;  2KWF A;  3FWC C;  2LXT A;  4G01 A;  3BPJ A;  2DG5 A;  1JNB A;  3ICX A;  2LOQ A;  4HGK A;  1E7E A;  3A73 A;  4IW2 A;  2XW0 A;  1E7G A;  2BXI A;  3WHQ A;  4G03 A;  4GDX A;  1FOU A;  2CKX A;  2XVV A;  4L9Q A;  5GIP A;  1TF0 A;  2Z8K A;  4G04 A;  2DBX A;  2GUT A;  2XVW A;  4L9K A;  3W1S A;  3GQU A;  2EFC A;  4DM0 A;  4S1Y A;  3MHH B;  3PLA A;  5DBY A;  4N0F D;  1MIW A;  1TXU A;  3GA9 L;  3UIV A;  4HGM B;  3NMU A;  4N0U D;  4TQ0 A;  2E0X A;  4ZBR A;  2BXH A;  3ECP A;  1HK3 A;  1VFI A;  2BX8 A;  2BXQ A;  2V36 A;  2EFH A;  4ZUX V;  2E0Y A;  3SIV B;  2LQH A;  1GNI A;  4FIP B;  2BXB A;  3NVK A;  3LU6 A;  5BPK A;  4LA0 A;  5IIH A;  5IJF A;  4GDK B;  5GHK A;  1O9X A;  3GQX A;  4GG2 A;  2QMC A;  1UOR A;  4JK4 A;  4F5U A;  2K0N A;  4NAW B;  2DBU A;  2QHB A; 
#chains in the Genus database with same CATH homology
 3B9M A;  3M99 C;  1BKE A;  4L8U A;  4WA6 B;  4PO0 A;  2VDB A;  5HOZ A;  4OTU A;  5IIX A;  4DHX B;  2QM6 A;  4EMX A;  3A75 A;  4IW1 A;  1HK4 A;  4K2C A;  3WHR A;  3SQJ A;  4LB9 A;  4GDL B;  3JRY A;  2BXC A;  1BJ5 A;  5DQF A;  5IIU A;  2EFE A;  2DYM A;  5ID7 A;  4C31 B;  2AJE A;  5GIO A;  2BXG A;  2BXA A;  2DYO A;  1J78 A;  4ZBQ A;  2BXP A;  3JQZ A;  4F5S A;  2BXD A;  1HA2 A;  1HK1 A;  4Z69 A;  1J7E A;  3WHS A;  1NT2 B;  1H9Z A;  2KBZ A;  4J2V A;  5ID9 A;  3LU8 A;  3TDL A;  4N3Z A;  4E99 A;  3H37 A;  2XMO A;  4OTT A;  2I30 A;  4M70 B;  2EFD A;  2NQO A;  2VUF A;  2JUH A;  1AO6 A;  2XW1 A;  5GIN A;  3CX9 A;  1E7C A;  2BXN A;  3V08 A;  1E78 A;  3VQI A;  4OT2 A;  2XVU A;  4MBE C;  1H5W A;  3B9L A;  2DBW A;  4LUF A;  5IJ5 A;  1HK5 A;  1KW2 A;  3G9K D;  4Z9O A;  1E7F A;  1N5U A;  5FUO A;  3KJL A;  1E7B A;  4LB2 A;  1GNJ A;  3LU7 A;  1MA9 A;  4OR0 A;  3KIK A;  2XSI A;  3H3A A;  1KXP D;  1IJG A;  2BXK A;  2BXE A;  2BXO A;  4LUH A;  4BKE A;  4W4U B;  1E7I A;  5IJE A;  1E7A A;  3NVM A;  2VUE A;  4ZBK A;  2BXF A;  4K71 A;  3V03 A;  2NNW A;  4FK5 B;  1LOT A;  4BY9 C;  1LNS A;  3MHS B;  2Z8I A;  5B5T A;  2OZB B;  4F5V A;  3FNM A;  3NVI A;  3SIU B;  2BXL A;  2Z8J A;  5IFO A;  2OT3 A;  2ROH A;  1E7H A;  4FJC B;  2XVQ A;  1HK2 A;  2I2Z A;  1VZS A;  3V09 A;  2YDF A;  3FWB C;  5D7G A;  1MIY A;  4ZCG A;  1MIV A;  4TQ1 A;  4ZC6 A;  4F5T A;  2BXM A;  1BM0 A;  3FWC C;  4G01 A;  2DG5 A;  1JNB A;  3ICX A;  2LOQ A;  4HGK A;  1E7E A;  3A73 A;  4IW2 A;  2XW0 A;  1E7G A;  2BXI A;  3WHQ A;  4G03 A;  4GDX A;  1FOU A;  2CKX A;  2XVV A;  4L9Q A;  5GIP A;  1TF0 A;  2Z8K A;  4G04 A;  2DBX A;  4L9K A;  2XVW A;  3W1S A;  3GQU A;  2EFC A;  3PLA A;  4S1Y A;  3MHH B;  5DBY A;  4N0F D;  1MIW A;  1TXU A;  3GA9 L;  3UIV A;  4HGM B;  3NMU A;  4N0U D;  4TQ0 A;  2E0X A;  4ZBR A;  2BXH A;  1HK3 A;  1VFI A;  2BX8 A;  2BXQ A;  2V36 A;  2EFH A;  4ZUX V;  2E0Y A;  3SIV B;  1GNI A;  4FIP B;  2BXB A;  3NVK A;  5BPK A;  4LA0 A;  5IIH A;  5IJF A;  4GDK B;  5GHK A;  1O9X A;  3GQX A;  4GG2 A;  2QMC A;  1UOR A;  4JK4 A;  4F5U A;  3LU6 A;  4NAW B;  2DBU A;  2QHB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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