3V09A

Crystal structure of rabbit serum albumin
Total Genus 227
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
227
sequence length
583
structure length
583
Chain Sequence
EAHKSEIAHRFNDVGEEHFIGLVLITFSQYLQKCPYEEHAKLVKEVTDLAKACVADESAANCDKSLHDIFGDKICALPSLRDTYGDVADCCEKKEPERNECFLHHKDDKPDLPPFARPEADVLCKAFHDDEKAFFGHYLYEVARRHPYFYAPELLYYAQKYKAILTECCEAADKGACLTPKLDALEGKSLISAAQERLRCASIQKFGDRAYKAWALVRLSQRFPKADFTDISKIVTDLTKVHKECCHGDLLECADDRADLAKYMCEHQETISSHLKECCDKPILEKAHCIYGLHNDETPAGLPAVAEEFVEDKDVCKNYEEAKDLFLGKFLYEYSRRHPDYSVVLLLRLGKAYEATLKKCCATDDPHACYAKVLDEFQPLVDEPKNLVKQNCELYEQLGDYNFQNALLVRYTKKVPQVSTPTLVEISRSLGKVGSKCCKHPEAERLPCVEDYLSVVLNRLCVLHEKTPVSEKVTKCCSESLVDRRPCFSALGPDETYVPKEFNAETFTFHADICTLPETERKIKKQTALVELVKHKPHATNDQLKTVVGEFTALLDKCCSAEDKEACFAVEGPKLVESSKATL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Structural and immunologic characterization of bovine, horse, and rabbit serum albumins.
pubmed doi rcsb
total genus 227
structure length 583
sequence length 583
ec nomenclature
pdb deposition date 2011-12-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v09A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v09A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v09A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v09A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v09A05
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 3v09A06
4IW1A 1BJ5A 2XVQA 2XVVA 1E7CA 2I2ZA 5IJEA 2VDBA 1AO6A 2BXNA 4JK4A 2BXMA 2I30A 3JQZA 1TF0A 4ZBQA 4F5UA 1HK2A 5IJFA 4L8UA 5IJ5A 2BXQA 4N0FD 2XW1A 1KW2A 2VUFA 3LU8A 4OT2A 3A73A 2BXOA 3V08A 4LB9A 2BXCA 5IIUA 4J2VA 1UORA 1HK5A 1LOTA 2XSIA 4F5SA 4N0UD 1E7GA 1KXPD 3JRYA 4G03A 2BXKA 3V09A 5IIHA 1E7AA 1GNIA 1BM0A 4HGKA 5FUOA 4F5VA 2XVWA 1O9XA 4L9KA 4Z69A 1J78A 1E7EA 4S1YA 4OR0A 2BXHA 2XVUA 3LU6A 2BX8A 1HK4A 1MA9A 1HK3A 4LUHA 4LUFA 5DBYA 4LB2A 2BXAA 4ZBRA 3SQJA 1J7EA 1N5UA 2BXPA 3TDLA 2VUEA 1E7IA 1BKEA 1E7BA 3B9LA 4LA0A 1HA2A 2YDFA 1HK1A 3UIVA 4G04A 3B9MA 4K2CA 5ID7A 1H9ZA 2BXEA 2BXBA 2BXLA 4K71A 5IIXA 4PO0A 4F5TA 4BKEA 4EMXA 4E99A 4HGMB 3LU7A 5DQFA 2XW0A 2BXGA 5HOZA 3V03A 2BXDA 1GNJA 4IW2A 1E78A 4L9QA 2BXIA 1E7HA 3CX9A 5ID9A 5GHKA 2BXFA 1E7FA 5IFOA
chains in the Genus database with same CATH superfamily
4IW1A 1BJ5A 2OT3A 4FJCB 2XVQA 2XVVA 5GINA 1E7CA 2ROHA 2LQHA 2I2ZA 5BPKA 5IJEA 2VDBA 1AO6A 2BXNA 2EFEA 2BXMA 4JK4A 4WA6B 4GG2A 2I30A 2LXSA 1TF0A 3JQZA 4BY9C 2QHBA 4ZBQA 2NNWA 3NMUA 4F5UA 1HK2A 1SB0A 3WHSA 5IJFA 3KIKA 4L8UA 2QM6A 2E0XA 5IJ5A 3SIVB 2BXQA 4N0FD 3GQXA 2XW1A 4FK5B 1KW2A 2VUFA 2LXTA 3LU8A 4OT2A 4W4UB 3A73A 2BXOA 3ECPA 4M70B 4MBEC 1VZSA 4GDKB 3V08A 3M99C 3FWBC 4LB9A 3GQUA 4TQ0A 2BXCA 5IIUA 4J2VA 2Z8IA 1UORA 1HK5A 2DBUA 1LOTA 2CKXA 2DBXA 2KBZA 2XSIA 3SIUB 4OTTA 4F5SA 4N0UD 1E7GA 1KXPD 3JRYA 4G03A 2BXKA 3H3AA 3V09A 4DHXB 2K0NA 5IIHA 2AGHB 2DG5A 1E7AA 2Z8KA 3GA9L 3H37A 2EFDA 3BPJA 1GNIA 1TXUA 1BM0A 4HGKA 3ICXA 5FUOA 2EFCA 4N3ZA 4ZBKA 4F5VA 2XVWA 2Z8JA 1O9XA 3MHHB 4L9KA 4C31B 1J78A 4Z69A 1E7EA 2QMCA 4S1YA 4OR0A 2BXHA 2XVUA 3LU6A 2BX8A 1HK4A 1MA9A 1HK3A 2AJEA 4LUHA 4LUFA 1MIYA 5DBYA 2KWFA 4LB2A 2BXAA 1FOUA 4ZBRA 3SQJA 1J7EA 4TQ1A 1N5UA 4DM0A 1MUSA 2BXPA 3TDLA 2V36A 1VFIA 4GDLB 2DBWA 2JUHA 2E0YA 3G9KD 3W1SA 2VUEA 4G01A 4ZUXV 2OZBB 3PLAA 2GUTA 1E7IA 1BKEA 1E7BA 1MIWA 3B9LA 3MHSB 4LA0A 4OTUA 1HA2A 2DYOA 2YDFA 1HK1A 1LNSA 3NVMA 2DYMA 2LQIA 1H5WA 3UIVA 2NQOA 4GDXA 1KDXA 4G04A 3B9MA 4K2CA 5ID7A 3NVKA 5D7GA 1H9ZA 4FIPB 5GIPA 4ZCGA 2BXEA 3WHRA 1MIVA 2BXBA 2BXLA 4K71A 5IIXA 2EFHA 3WHQA 4PO0A 4ZC6A 3FWCC 4F5TA 2LOQA 3VQIA 1JNBA 4BKEA 4EMXA 5GIOA 4E99A 1MM8A 4HGMB 3LU7A 1IJGA 5DQFA 2XW0A 2BXGA 2XMOA 5HOZA 3V03A 2BXDA 1GNJA 4IW2A 1NT2B 5B5TA 1E78A 4I9OA 4D7XA 3KJLA 4L9QA 2BXIA 3A75A 1E7HA 3FNMA 3CX9A 4NAWB 5GHKA 2BXFA 5ID9A 4Z9OA 1E7FA 3NVIA 1MUHA 5IFOA
chains in the Genus database with same CATH topology
4IW1A 1BJ5A 2OT3A 4FJCB 2XVQA 2XVVA 5GINA 1E7CA 2ROHA 2I2ZA 5BPKA 5IJEA 2VDBA 1AO6A 2BXNA 2EFEA 2BXMA 4JK4A 4WA6B 4GG2A 2I30A 3JQZA 1TF0A 4BY9C 2QHBA 4ZBQA 2NNWA 3NMUA 4F5UA 1HK2A 3WHSA 5IJFA 3KIKA 4L8UA 2QM6A 2E0XA 5IJ5A 3SIVB 2BXQA 4N0FD 3GQXA 2XW1A 4FK5B 1KW2A 2VUFA 3LU8A 4OT2A 4W4UB 3A73A 2BXOA 4M70B 4MBEC 1VZSA 4GDKB 3V08A 3M99C 3FWBC 4LB9A 3GQUA 4TQ0A 2BXCA 5IIUA 4J2VA 2Z8IA 1UORA 1HK5A 2DBUA 1LOTA 2CKXA 2DBXA 2KBZA 2XSIA 3SIUB 4OTTA 4F5SA 4N0UD 1E7GA 1KXPD 3JRYA 4G03A 2BXKA 3H3AA 3V09A 4DHXB 5IIHA 2Z8KA 2DG5A 1E7AA 3GA9L 3H37A 2EFDA 1GNIA 1TXUA 1BM0A 4HGKA 3ICXA 5FUOA 2EFCA 4N3ZA 4ZBKA 4F5VA 2XVWA 2Z8JA 1O9XA 3MHHB 4L9KA 4C31B 1J78A 4Z69A 1E7EA 2QMCA 4S1YA 4OR0A 2BXHA 2XVUA 3LU6A 2BX8A 1HK4A 1MA9A 1HK3A 2AJEA 4LUHA 4LUFA 1MIYA 5DBYA 4LB2A 2BXAA 1FOUA 4ZBRA 3SQJA 1J7EA 4TQ1A 1N5UA 2BXPA 3TDLA 2V36A 1VFIA 4GDLB 2DBWA 2JUHA 2E0YA 3G9KD 3W1SA 2VUEA 4G01A 4ZUXV 2OZBB 3PLAA 4OTUA 1E7IA 1BKEA 1E7BA 1MIWA 3B9LA 3MHSB 4LA0A 1HA2A 2DYOA 2YDFA 1HK1A 1LNSA 3NVMA 2DYMA 1H5WA 3UIVA 2NQOA 4GDXA 4G04A 3B9MA 4K2CA 5ID7A 3NVKA 5D7GA 1H9ZA 4FIPB 5GIPA 4ZCGA 2BXEA 3WHRA 1MIVA 2BXBA 2BXLA 4K71A 5IIXA 2EFHA 3WHQA 4PO0A 4ZC6A 3FWCC 4F5TA 2LOQA 3VQIA 1JNBA 4BKEA 4EMXA 5GIOA 4E99A 4HGMB 3LU7A 1IJGA 5DQFA 2XW0A 2BXGA 2XMOA 5HOZA 3V03A 2BXDA 1GNJA 4IW2A 1NT2B 5B5TA 1E78A 3KJLA 4L9QA 2BXIA 3A75A 1E7HA 3FNMA 3CX9A 4NAWB 5GHKA 2BXFA 5ID9A 4Z9OA 1E7FA 3NVIA 5IFOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IW1 A;  1BJ5 A;  2XVQ A;  2XVV A;  1E7C A;  2I2Z A;  5IJE A;  2VDB A;  1AO6 A;  2BXN A;  4JK4 A;  2BXM A;  2I30 A;  3JQZ A;  1TF0 A;  4ZBQ A;  4F5U A;  1HK2 A;  5IJF A;  4L8U A;  5IJ5 A;  2BXQ A;  4N0F D;  2XW1 A;  1KW2 A;  2VUF A;  3LU8 A;  4OT2 A;  3A73 A;  2BXO A;  3V08 A;  4LB9 A;  2BXC A;  5IIU A;  4J2V A;  1UOR A;  1HK5 A;  1LOT A;  2XSI A;  4F5S A;  4N0U D;  1E7G A;  1KXP D;  3JRY A;  4G03 A;  2BXK A;  3V09 A;  5IIH A;  1E7A A;  1GNI A;  1BM0 A;  4HGK A;  5FUO A;  4F5V A;  2XVW A;  1O9X A;  4L9K A;  4Z69 A;  1J78 A;  1E7E A;  4S1Y A;  4OR0 A;  2BXH A;  2XVU A;  3LU6 A;  2BX8 A;  1HK4 A;  1MA9 A;  1HK3 A;  4LUH A;  4LUF A;  5DBY A;  4LB2 A;  2BXA A;  4ZBR A;  3SQJ A;  1J7E A;  1N5U A;  2BXP A;  3TDL A;  2VUE A;  1E7I A;  1BKE A;  1E7B A;  3B9L A;  4LA0 A;  1HA2 A;  2YDF A;  1HK1 A;  3UIV A;  4G04 A;  3B9M A;  4K2C A;  5ID7 A;  1H9Z A;  2BXE A;  2BXB A;  2BXL A;  4K71 A;  5IIX A;  4PO0 A;  4F5T A;  4BKE A;  4EMX A;  4E99 A;  4HGM B;  3LU7 A;  5DQF A;  2XW0 A;  2BXG A;  5HOZ A;  3V03 A;  2BXD A;  1GNJ A;  4IW2 A;  1E78 A;  4L9Q A;  2BXI A;  1E7H A;  3CX9 A;  5ID9 A;  5GHK A;  2BXF A;  1E7F A;  5IFO A; 
#chains in the Genus database with same CATH topology
 4IW1 A;  1BJ5 A;  2OT3 A;  4FJC B;  2XVQ A;  2XVV A;  5GIN A;  1E7C A;  2ROH A;  2LQH A;  2I2Z A;  5BPK A;  5IJE A;  2VDB A;  1AO6 A;  2BXN A;  2EFE A;  2BXM A;  4JK4 A;  4WA6 B;  4GG2 A;  2I30 A;  2LXS A;  1TF0 A;  3JQZ A;  4BY9 C;  2QHB A;  4ZBQ A;  2NNW A;  3NMU A;  4F5U A;  1HK2 A;  1SB0 A;  3WHS A;  5IJF A;  3KIK A;  4L8U A;  2QM6 A;  2E0X A;  5IJ5 A;  3SIV B;  2BXQ A;  4N0F D;  3GQX A;  2XW1 A;  4FK5 B;  1KW2 A;  2VUF A;  2LXT A;  3LU8 A;  4OT2 A;  4W4U B;  3A73 A;  2BXO A;  3ECP A;  4M70 B;  4MBE C;  1VZS A;  4GDK B;  3V08 A;  3M99 C;  3FWB C;  4LB9 A;  3GQU A;  4TQ0 A;  2BXC A;  5IIU A;  4J2V A;  2Z8I A;  1UOR A;  1HK5 A;  2DBU A;  1LOT A;  2CKX A;  2DBX A;  2KBZ A;  2XSI A;  3SIU B;  4OTT A;  4F5S A;  4N0U D;  1E7G A;  1KXP D;  3JRY A;  4G03 A;  2BXK A;  3H3A A;  3V09 A;  4DHX B;  2K0N A;  5IIH A;  2AGH B;  2DG5 A;  1E7A A;  2Z8K A;  3GA9 L;  3H37 A;  2EFD A;  3BPJ A;  1GNI A;  1TXU A;  1BM0 A;  4HGK A;  3ICX A;  5FUO A;  2EFC A;  4N3Z A;  4ZBK A;  4F5V A;  2XVW A;  2Z8J A;  1O9X A;  3MHH B;  4L9K A;  4C31 B;  1J78 A;  4Z69 A;  1E7E A;  2QMC A;  4S1Y A;  4OR0 A;  2BXH A;  2XVU A;  3LU6 A;  2BX8 A;  1HK4 A;  1MA9 A;  1HK3 A;  2AJE A;  4LUH A;  4LUF A;  1MIY A;  5DBY A;  2KWF A;  4LB2 A;  2BXA A;  1FOU A;  4ZBR A;  3SQJ A;  1J7E A;  4TQ1 A;  1N5U A;  4DM0 A;  1MUS A;  2BXP A;  3TDL A;  2V36 A;  1VFI A;  4GDL B;  2DBW A;  2JUH A;  2E0Y A;  3G9K D;  3W1S A;  2VUE A;  4G01 A;  4ZUX V;  2OZB B;  3PLA A;  2GUT A;  1E7I A;  1BKE A;  1E7B A;  1MIW A;  3B9L A;  3MHS B;  4LA0 A;  4OTU A;  1HA2 A;  2DYO A;  2YDF A;  1HK1 A;  1LNS A;  3NVM A;  2DYM A;  2LQI A;  1H5W A;  3UIV A;  2NQO A;  4GDX A;  1KDX A;  4G04 A;  3B9M A;  4K2C A;  5ID7 A;  3NVK A;  5D7G A;  1H9Z A;  4FIP B;  5GIP A;  4ZCG A;  2BXE A;  3WHR A;  1MIV A;  2BXB A;  2BXL A;  4K71 A;  5IIX A;  2EFH A;  3WHQ A;  4PO0 A;  4ZC6 A;  3FWC C;  4F5T A;  2LOQ A;  3VQI A;  1JNB A;  4BKE A;  4EMX A;  5GIO A;  4E99 A;  1MM8 A;  4HGM B;  3LU7 A;  1IJG A;  5DQF A;  2XW0 A;  2BXG A;  2XMO A;  5HOZ A;  3V03 A;  2BXD A;  1GNJ A;  4IW2 A;  1NT2 B;  5B5T A;  1E78 A;  4I9O A;  4D7X A;  3KJL A;  4L9Q A;  2BXI A;  3A75 A;  1E7H A;  3FNM A;  3CX9 A;  4NAW B;  5GHK A;  2BXF A;  5ID9 A;  4Z9O A;  1E7F A;  3NVI A;  1MUH A;  5IFO A; 
#chains in the Genus database with same CATH homology
 4IW1 A;  1BJ5 A;  2OT3 A;  4FJC B;  2XVQ A;  2XVV A;  5GIN A;  1E7C A;  2ROH A;  2I2Z A;  5BPK A;  5IJE A;  2VDB A;  1AO6 A;  2BXN A;  2EFE A;  2BXM A;  4JK4 A;  4WA6 B;  4GG2 A;  2I30 A;  3JQZ A;  1TF0 A;  4BY9 C;  2QHB A;  4ZBQ A;  2NNW A;  3NMU A;  4F5U A;  1HK2 A;  3WHS A;  5IJF A;  3KIK A;  4L8U A;  2QM6 A;  2E0X A;  5IJ5 A;  3SIV B;  2BXQ A;  4N0F D;  3GQX A;  2XW1 A;  4FK5 B;  1KW2 A;  2VUF A;  3LU8 A;  4OT2 A;  4W4U B;  3A73 A;  2BXO A;  4M70 B;  4MBE C;  1VZS A;  4GDK B;  3V08 A;  3M99 C;  3FWB C;  4LB9 A;  3GQU A;  4TQ0 A;  2BXC A;  5IIU A;  4J2V A;  2Z8I A;  1UOR A;  1HK5 A;  2DBU A;  1LOT A;  2CKX A;  2DBX A;  2KBZ A;  2XSI A;  3SIU B;  4OTT A;  4F5S A;  4N0U D;  1E7G A;  1KXP D;  3JRY A;  4G03 A;  2BXK A;  3H3A A;  3V09 A;  4DHX B;  5IIH A;  2Z8K A;  2DG5 A;  1E7A A;  3GA9 L;  3H37 A;  2EFD A;  1GNI A;  1TXU A;  1BM0 A;  4HGK A;  3ICX A;  5FUO A;  2EFC A;  4N3Z A;  4ZBK A;  4F5V A;  2XVW A;  2Z8J A;  1O9X A;  3MHH B;  4L9K A;  4C31 B;  1J78 A;  4Z69 A;  1E7E A;  2QMC A;  4S1Y A;  4OR0 A;  2BXH A;  2XVU A;  3LU6 A;  2BX8 A;  1HK4 A;  1MA9 A;  1HK3 A;  2AJE A;  4LUH A;  4LUF A;  1MIY A;  5DBY A;  4LB2 A;  2BXA A;  1FOU A;  4ZBR A;  3SQJ A;  1J7E A;  4TQ1 A;  1N5U A;  2BXP A;  3TDL A;  2V36 A;  1VFI A;  4GDL B;  2DBW A;  2JUH A;  2E0Y A;  3G9K D;  3W1S A;  2VUE A;  4G01 A;  4ZUX V;  2OZB B;  3PLA A;  4OTU A;  1E7I A;  1BKE A;  1E7B A;  1MIW A;  3B9L A;  3MHS B;  4LA0 A;  1HA2 A;  2DYO A;  2YDF A;  1HK1 A;  1LNS A;  3NVM A;  2DYM A;  1H5W A;  3UIV A;  2NQO A;  4GDX A;  4G04 A;  3B9M A;  4K2C A;  5ID7 A;  3NVK A;  5D7G A;  1H9Z A;  4FIP B;  5GIP A;  4ZCG A;  2BXE A;  3WHR A;  1MIV A;  2BXB A;  2BXL A;  4K71 A;  5IIX A;  2EFH A;  3WHQ A;  4PO0 A;  4ZC6 A;  3FWC C;  4F5T A;  2LOQ A;  3VQI A;  1JNB A;  4BKE A;  4EMX A;  5GIO A;  4E99 A;  4HGM B;  3LU7 A;  1IJG A;  5DQF A;  2XW0 A;  2BXG A;  2XMO A;  5HOZ A;  3V03 A;  2BXD A;  1GNJ A;  4IW2 A;  1NT2 B;  5B5T A;  1E78 A;  3KJL A;  4L9Q A;  2BXI A;  3A75 A;  1E7H A;  3FNM A;  3CX9 A;  4NAW B;  5GHK A;  2BXF A;  5ID9 A;  4Z9O A;  1E7F A;  3NVI A;  5IFO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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