4ZC6A

Crystal structure of human ggt1 in complex with serine borate
Total Genus 110

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
110
sequence length
342
structure length
342
Chain Sequence
DNHVYTRAAVAADAKQCSKIGRDALRDGGSAVDAAIAALLCVGLMNAHSMGIGGGLFLTIYNSTTRKAEVINAREVAPRLAFATMFNSSEQSQKGGLSVAVPGEIRGYELAHQRHGRLPWARLFQPSIQLARQGFPVGKGLAAALENKRTVIEQQPVLCEVFCRDRKVLREGERLTLPQLADTYETLAIEGAQAFYNGSLTAQIVKDIQAAGGIVTAEDLNNYRAELIEHPLNISLGDAVLYMPSAPLSGPVLALILNILKGYNFSRESVESPEQKGLTYHRIVEAFRFAYAKRTLLGDPKFVDVTEVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYT
5010015020025030030025020015010050
020406080100Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH5 (172-187)TI1 (38-41)TVIII1 (45-48)AH1 (48-60)AH2 (64-78)TI6 (111-114)TI7 (115-118)AH7 (211-223)S2 (100-106)TI2 (79-82)TI4 (84-87)S1 (89-95)TIV1 (95-98)TI5 (96-99)AH6 (189-195)3H1 (122-125)3H2 (129-131)S3 (168-170)TIV2 (196-199)S4 (196-197)S5 (200-201)EMPTYTII1 (203-206)3H3 (300-303)AH8 (225-229)AH9 (233-244)S7 (259-261)AH10 (250-255)S8 (265-269)TVIa1 (278-281)S9 (272-276)AH12 (306-326)3H4 (327-329)AH11 (282-295)TI8 (332-335)TI9 (333-336)AH3 (136-148)AH4 (153-166)S6 (206-208)TVIII2 (261-264)TII'1 (269-272)O1 (50-74)AH13 (338-346)Updating...
connected with : NaN
publication title Human gamma-Glutamyl Transpeptidase 1: STRUCTURES OF THE FREE ENZYME, INHIBITOR-BOUND TETRAHEDRAL TRANSITION STATES, AND GLUTAMATE-BOUND ENZYME REVEAL NOVEL MOVEMENT WITHIN THE ACTIVE SITE DURING CATALYSIS.
pubmed doi rcsb
molecule keywords Gamma-glutamyltranspeptidase 1 heavy chain
molecule tags Hydrolase/hydrolase inhibitor
source organism Homo sapiens
total genus 110
structure length 342
sequence length 342
ec nomenclature ec 2.3.2.2: Gamma-glutamyltransferase.
pdb deposition date 2015-04-15
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.130 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4zc6A02
2V36A 3A75A 2DBUA 5BPKA 4GDXA 2E0XA 2Z8JA 2Z8IA 3WHSA 4ZBKA 4Z9OA 2DBXA 2DBWA 3FNMA 4OTTA 2Z8KA 3WHRA 2DG5A 2NQOA 4OTUA 5B5TA 3WHQA 2QM6A 4ZC6A 4GG2A 4ZCGA 2QMCA 2E0YA
chains in the Genus database with same CATH superfamily
3SQJA 1LOTA 2LOQA 1HK2A 2BXEA 2V36A 2XMOA 3LU8A 1MIWA 4IW2A 1E78A 4TQ1A 3V03A 5IJEA 4LA0A 2DBUA 4GDXA 5GIOA 1MIYA 5ID9A 2BXOA 2Z8JA 2BXMA 2VUEA 2Z8IA 4J2VA 1O9XA 4ZBRA 4E99A 4TQ0A 4Z69A 5IIXA 1AO6A 1J7EA 4M70B 3FNMA 1BKEA 1JNBA 4IW1A 2EFCA 3GA9L 3WHRA 2XVQA 2AJEA 3VQIA 3GQXA 3V08A 3H37A 3UIVA 4S1YA 2DG5A 1GNJA 4LB2A 3FWCC 2VDBA 4JK4A 3LU6A 1HA2A 4OTUA 2BXFA 3WHQA 3LU7A 5GIPA 4F5TA 4DHXB 2XVUA 4ZUXV 5ID7A 2OZBB 4HGMB 2BXDA 4GDLB 5IFOA 2I30A 1E7CA 4LUFA 3SIVB 3M99C 5IIUA 1E7IA 3H3AA 3A75A 5GHKA 1H5WA 2EFDA 2XW1A 4N0UD 2E0XA 2BXPA 3ECPA 4D7XA 4ZBKA 4HGKA 5IIHA 3TDLA 2Z8KA 4NAWB 3NMUA 2LXSA 3ICXA 1MUSA 1IJGA 1E7AA 1E7FA 3KIKA 4F5UA 2ROHA 2DYOA 2LXTA 4GDKB 2BXAA 4I9OA 4OR0A 2BXLA 3JQZA 2CKXA 2I2ZA 2QMCA 2XW0A 2E0YA 2BXBA 3KJLA 4GG2A 4ZCGA 1MIVA 1BJ5A 5DQFA 2BXCA 4LUHA 1HK1A 2BXNA 4PO0A 2BXKA 4FIPB 4K2CA 4ZBQA 2LQHA 5BPKA 3NVKA 5D7GA 1J78A 3WHSA 1KW2A 3GQUA 4OT2A 4DM0A 1HK3A 1UORA 3B9MA 1TXUA 4FK5B 2XVVA 4OTTA 4EMXA 1E7GA 1MA9A 4WA6B 4BKEA 1LNSA 4G03A 3NVIA 4K71A 5B5TA 2DYMA 3W1SA 2BXQA 2QM6A 2OT3A 1VFIA 4F5SA 1VZSA 1NT2B 2BX8A 1GNIA 2BXHA 2KWFA 4FJCB 4MBEC 5GINA 1E7BA 1HK5A 3JRYA 2QHBA 4C31B 2EFHA 3FWBC 3A73A 4F5VA 3MHHB 2K0NA 2VUFA 4LB9A 3NVMA 1KXPD 3B9LA 3CX9A 5DBYA 1E7HA 2BXGA 4L8UA 4Z9OA 1H9ZA 3V09A 1FOUA 2DBXA 2DBWA 5FUOA 5HOZA 1N5UA 2XSIA 1SB0A 4L9QA 4N0FD 2GUTA 3PLAA 1E7EA 4N3ZA 4BY9C 3G9KD 4G04A 2LQIA 4L9KA 2NQOA 4W4UB 2NNWA 2EFEA 1MM8A 4ZC6A 1TF0A 5IJFA 1BM0A 5IJ5A 2AGHB 1HK4A 2JUHA 2YDFA 4G01A 3MHSB 3BPJA 3SIUB 2BXIA 1KDXA 1MUHA 2KBZA 2XVWA
chains in the Genus database with same CATH topology
3SQJA 1LOTA 2LOQA 1HK2A 2BXEA 2V36A 2XMOA 3LU8A 1MIWA 4IW2A 1E78A 4TQ1A 3V03A 5IJEA 4LA0A 2DBUA 4GDXA 5GIOA 1MIYA 5ID9A 2BXOA 2Z8JA 2BXMA 2VUEA 2Z8IA 4J2VA 1O9XA 4ZBRA 4E99A 4TQ0A 4Z69A 5IIXA 1AO6A 1J7EA 4M70B 3FNMA 1BKEA 1JNBA 4IW1A 2EFCA 3GA9L 3WHRA 2XVQA 2AJEA 3VQIA 3GQXA 3V08A 3H37A 3UIVA 4S1YA 2DG5A 1GNJA 4LB2A 3FWCC 2VDBA 4JK4A 3LU6A 1HA2A 4OTUA 2BXFA 3WHQA 3LU7A 5GIPA 4F5TA 4DHXB 2XVUA 4ZUXV 5ID7A 2OZBB 4HGMB 2BXDA 4GDLB 5IFOA 2I30A 1E7CA 4LUFA 3SIVB 3M99C 5IIUA 1E7IA 3H3AA 3A75A 5GHKA 1H5WA 2EFDA 2XW1A 4N0UD 2E0XA 2BXPA 4ZBKA 4HGKA 5IIHA 3TDLA 2Z8KA 4NAWB 3NMUA 3ICXA 1IJGA 1E7AA 1E7FA 3KIKA 4F5UA 2ROHA 2DYOA 4GDKB 2BXAA 4OR0A 2BXLA 3JQZA 2CKXA 2I2ZA 2QMCA 2XW0A 2E0YA 2BXBA 3KJLA 4GG2A 4ZCGA 1MIVA 1BJ5A 5DQFA 2BXCA 4LUHA 1HK1A 2BXNA 4PO0A 2BXKA 4FIPB 4K2CA 4ZBQA 5BPKA 3NVKA 5D7GA 1J78A 3WHSA 1KW2A 3GQUA 4OT2A 1HK3A 1UORA 3B9MA 1TXUA 4FK5B 2XVVA 4OTTA 4EMXA 1E7GA 1MA9A 4WA6B 4BKEA 1LNSA 4G03A 3NVIA 4K71A 5B5TA 2DYMA 3W1SA 2BXQA 2QM6A 2OT3A 1VFIA 4F5SA 1VZSA 1NT2B 2BX8A 1GNIA 2BXHA 4MBEC 4FJCB 5GINA 1E7BA 1HK5A 3JRYA 2QHBA 4C31B 2EFHA 3FWBC 3A73A 4F5VA 3MHHB 2VUFA 4LB9A 3NVMA 1KXPD 3B9LA 3CX9A 5DBYA 1E7HA 2BXGA 4L8UA 4Z9OA 1H9ZA 3V09A 1FOUA 2DBXA 2DBWA 5FUOA 5HOZA 1N5UA 2XSIA 4L9QA 4N0FD 3PLAA 1E7EA 4N3ZA 4BY9C 3G9KD 4G04A 4L9KA 2NQOA 4W4UB 2NNWA 2EFEA 4ZC6A 1TF0A 5IJFA 1BM0A 5IJ5A 1HK4A 2JUHA 2YDFA 4G01A 3MHSB 3SIUB 2BXIA 2KBZA 2XVWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2V36 A;  3A75 A;  2DBU A;  5BPK A;  4GDX A;  2E0X A;  2Z8J A;  2Z8I A;  3WHS A;  4ZBK A;  4Z9O A;  2DBX A;  2DBW A;  3FNM A;  4OTT A;  2Z8K A;  3WHR A;  2DG5 A;  2NQO A;  4OTU A;  5B5T A;  3WHQ A;  2QM6 A;  4ZC6 A;  4GG2 A;  4ZCG A;  2QMC A;  2E0Y A; 
#chains in the Genus database with same CATH topology
 3SQJ A;  1LOT A;  2LOQ A;  1HK2 A;  2BXE A;  2V36 A;  2XMO A;  3LU8 A;  1MIW A;  4IW2 A;  1E78 A;  4TQ1 A;  3V03 A;  5IJE A;  4LA0 A;  2DBU A;  4GDX A;  5GIO A;  1MIY A;  5ID9 A;  2BXO A;  2Z8J A;  2BXM A;  2VUE A;  2Z8I A;  4J2V A;  1O9X A;  4ZBR A;  4E99 A;  4TQ0 A;  4Z69 A;  5IIX A;  1AO6 A;  1J7E A;  4M70 B;  3FNM A;  1BKE A;  1JNB A;  4IW1 A;  2EFC A;  3GA9 L;  3WHR A;  2XVQ A;  2AJE A;  3VQI A;  3GQX A;  3V08 A;  3H37 A;  3UIV A;  4S1Y A;  2DG5 A;  1GNJ A;  4LB2 A;  3FWC C;  2VDB A;  4JK4 A;  3LU6 A;  1HA2 A;  4OTU A;  2BXF A;  3WHQ A;  3LU7 A;  5GIP A;  4F5T A;  4DHX B;  2XVU A;  4ZUX V;  5ID7 A;  2OZB B;  4HGM B;  2BXD A;  4GDL B;  5IFO A;  2I30 A;  1E7C A;  4LUF A;  3SIV B;  3M99 C;  5IIU A;  1E7I A;  3H3A A;  3A75 A;  5GHK A;  1H5W A;  2EFD A;  2XW1 A;  4N0U D;  2E0X A;  2BXP A;  3ECP A;  4D7X A;  4ZBK A;  4HGK A;  5IIH A;  3TDL A;  2Z8K A;  4NAW B;  3NMU A;  2LXS A;  3ICX A;  1MUS A;  1IJG A;  1E7A A;  1E7F A;  3KIK A;  4F5U A;  2ROH A;  2DYO A;  2LXT A;  4GDK B;  2BXA A;  4I9O A;  4OR0 A;  2BXL A;  3JQZ A;  2CKX A;  2I2Z A;  2QMC A;  2XW0 A;  2E0Y A;  2BXB A;  3KJL A;  4GG2 A;  4ZCG A;  1MIV A;  1BJ5 A;  5DQF A;  2BXC A;  4LUH A;  1HK1 A;  2BXN A;  4PO0 A;  2BXK A;  4FIP B;  4K2C A;  4ZBQ A;  2LQH A;  5BPK A;  3NVK A;  5D7G A;  1J78 A;  3WHS A;  1KW2 A;  3GQU A;  4OT2 A;  4DM0 A;  1HK3 A;  1UOR A;  3B9M A;  1TXU A;  4FK5 B;  2XVV A;  4OTT A;  4EMX A;  1E7G A;  1MA9 A;  4WA6 B;  4BKE A;  1LNS A;  4G03 A;  3NVI A;  4K71 A;  5B5T A;  2DYM A;  3W1S A;  2BXQ A;  2QM6 A;  2OT3 A;  1VFI A;  4F5S A;  1VZS A;  1NT2 B;  2BX8 A;  1GNI A;  2BXH A;  2KWF A;  4FJC B;  4MBE C;  5GIN A;  1E7B A;  1HK5 A;  3JRY A;  2QHB A;  4C31 B;  2EFH A;  3FWB C;  3A73 A;  4F5V A;  3MHH B;  2K0N A;  2VUF A;  4LB9 A;  3NVM A;  1KXP D;  3B9L A;  3CX9 A;  5DBY A;  1E7H A;  2BXG A;  4L8U A;  4Z9O A;  1H9Z A;  3V09 A;  1FOU A;  2DBX A;  2DBW A;  5FUO A;  5HOZ A;  1N5U A;  2XSI A;  1SB0 A;  4L9Q A;  4N0F D;  2GUT A;  3PLA A;  1E7E A;  4N3Z A;  4BY9 C;  3G9K D;  4G04 A;  2LQI A;  4L9K A;  2NQO A;  4W4U B;  2NNW A;  2EFE A;  1MM8 A;  4ZC6 A;  1TF0 A;  5IJF A;  1BM0 A;  5IJ5 A;  2AGH B;  1HK4 A;  2JUH A;  2YDF A;  4G01 A;  3MHS B;  3BPJ A;  3SIU B;  2BXI A;  1KDX A;  1MUH A;  2KBZ A;  2XVW A; 
#chains in the Genus database with same CATH homology
 3SQJ A;  1LOT A;  2LOQ A;  1HK2 A;  2BXE A;  2V36 A;  2XMO A;  3LU8 A;  1MIW A;  4IW2 A;  1E78 A;  4TQ1 A;  3V03 A;  5IJE A;  4LA0 A;  2DBU A;  4GDX A;  5GIO A;  1MIY A;  5ID9 A;  2BXO A;  2Z8J A;  2BXM A;  2VUE A;  2Z8I A;  4J2V A;  1O9X A;  4ZBR A;  4E99 A;  4TQ0 A;  4Z69 A;  5IIX A;  1AO6 A;  1J7E A;  4M70 B;  3FNM A;  1BKE A;  1JNB A;  4IW1 A;  2EFC A;  3GA9 L;  3WHR A;  2XVQ A;  2AJE A;  3VQI A;  3GQX A;  3V08 A;  3H37 A;  3UIV A;  4S1Y A;  2DG5 A;  1GNJ A;  4LB2 A;  3FWC C;  2VDB A;  4JK4 A;  3LU6 A;  1HA2 A;  4OTU A;  2BXF A;  3WHQ A;  3LU7 A;  5GIP A;  4F5T A;  4DHX B;  2XVU A;  4ZUX V;  5ID7 A;  2OZB B;  4HGM B;  2BXD A;  4GDL B;  5IFO A;  2I30 A;  1E7C A;  4LUF A;  3SIV B;  3M99 C;  5IIU A;  1E7I A;  3H3A A;  3A75 A;  5GHK A;  1H5W A;  2EFD A;  2XW1 A;  4N0U D;  2E0X A;  2BXP A;  4ZBK A;  4HGK A;  5IIH A;  3TDL A;  2Z8K A;  4NAW B;  3NMU A;  3ICX A;  1IJG A;  1E7A A;  1E7F A;  3KIK A;  4F5U A;  2ROH A;  2DYO A;  4GDK B;  2BXA A;  4OR0 A;  2BXL A;  3JQZ A;  2CKX A;  2I2Z A;  2QMC A;  2XW0 A;  2E0Y A;  2BXB A;  3KJL A;  4GG2 A;  4ZCG A;  1MIV A;  1BJ5 A;  5DQF A;  2BXC A;  4LUH A;  1HK1 A;  2BXN A;  4PO0 A;  2BXK A;  4FIP B;  4K2C A;  4ZBQ A;  5BPK A;  3NVK A;  5D7G A;  1J78 A;  3WHS A;  1KW2 A;  3GQU A;  4OT2 A;  1HK3 A;  1UOR A;  3B9M A;  1TXU A;  4FK5 B;  2XVV A;  4OTT A;  4EMX A;  1E7G A;  1MA9 A;  4WA6 B;  4BKE A;  1LNS A;  4G03 A;  3NVI A;  4K71 A;  5B5T A;  2DYM A;  3W1S A;  2BXQ A;  2QM6 A;  2OT3 A;  1VFI A;  4F5S A;  1VZS A;  1NT2 B;  2BX8 A;  1GNI A;  2BXH A;  4MBE C;  4FJC B;  5GIN A;  1E7B A;  1HK5 A;  3JRY A;  2QHB A;  4C31 B;  2EFH A;  3FWB C;  3A73 A;  4F5V A;  3MHH B;  2VUF A;  4LB9 A;  3NVM A;  1KXP D;  3B9L A;  3CX9 A;  5DBY A;  1E7H A;  2BXG A;  4L8U A;  4Z9O A;  1H9Z A;  3V09 A;  1FOU A;  2DBX A;  2DBW A;  5FUO A;  5HOZ A;  1N5U A;  2XSI A;  4L9Q A;  4N0F D;  3PLA A;  1E7E A;  4N3Z A;  4BY9 C;  3G9K D;  4G04 A;  4L9K A;  2NQO A;  4W4U B;  2NNW A;  2EFE A;  4ZC6 A;  1TF0 A;  5IJF A;  1BM0 A;  5IJ5 A;  1HK4 A;  2JUH A;  2YDF A;  4G01 A;  3MHS B;  3SIU B;  2BXI A;  2KBZ A;  2XVW A; 
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