4F5SA

Crystal structure of bovine serum albumin
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structures of bovine, equine and leporine serum albumin.
pubmed doi rcsb
molecule tags Transport protein
molecule keywords Serum albumin
total genus 222
structure length 583
sequence length 583
chains with identical sequence B
ec nomenclature
pdb deposition date 2012-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5sA05
1HK3A 1E7GA 4F5VA 1E7EA 3JRYA 4K2CA 3SQJA 2XSIA 4N0UD 1E7IA 1J7EA 2XVVA 4LB9A 4ZBRA 1J78A 1HK2A 2BXNA 5DBYA 1E7FA 4OR0A 3B9LA 1BJ5A 5IJEA 5DQFA 2BXMA 1BM0A 5IJ5A 4G03A 4HGMB 1KW2A 2BXKA 3A73A 5ID7A 1E78A 5FUOA 4EMXA 4PO0A 5IIUA 2I2ZA 4BKEA 3V08A 2BXEA 2I30A 4LUHA 2BXOA 4HGKA 2VDBA 2XW1A 1BKEA 4F5SA 2BXGA 4J2VA 5IJFA 2XW0A 2XVQA 4L8UA 2YDFA 3LU8A 4Z69A 2VUEA 5IFOA 3UIVA 1E7HA 4F5UA 2BXFA 4IW2A 5IIHA 2BXAA 1H9ZA 2BXBA 1E7AA 1AO6A 1N5UA 5IIXA 4JK4A 3LU6A 4LUFA 4LA0A 1UORA 1TF0A 1LOTA 3TDLA 4L9QA 1KXPD 3V03A 2XVUA 4IW1A 2BXPA 1HA2A 2BXQA 1GNIA 4S1YA 4LB2A 1E7CA 2XVWA 1O9XA 5HOZA 1HK1A 5GHKA 4E99A 2BXHA 3V09A 3CX9A 1HK5A 1MA9A 1E7BA 4F5TA 3JQZA 2BXIA 2VUFA 4G04A 4ZBQA 2BXDA 1GNJA 4OT2A 2BXLA 4L9KA 4K71A 4N0FD 1HK4A 3B9MA 5ID9A 2BX8A 3LU7A 2BXCA
chains in the Genus database with same CATH superfamily
1HK3A 1E7GA 2DYMA 1E7EA 2Z8KA 3FNMA 3JRYA 4G01A 3BPJA 4F5VA 4K2CA 3SQJA 2KBZA 2XSIA 4N0UD 4NAWB 4BY9C 1E7IA 1JNBA 1J7EA 2XVVA 3H3AA 4LB9A 4ZBRA 4GG2A 2LQHA 3NMUA 1J78A 1HK2A 2BXNA 5DBYA 2LOQA 1E7FA 4OR0A 3WHRA 2EFCA 2LXSA 3B9LA 4GDXA 3SIVB 1BJ5A 5IJEA 4MBEC 3G9KD 5DQFA 3A75A 2BXMA 3M99C 4Z9OA 4TQ0A 1BM0A 5B5TA 5IJ5A 4G03A 3FWCC 4HGMB 1KW2A 2BXKA 3A73A 3H37A 4OTUA 5ID7A 1E78A 4WA6B 2DG5A 2XMOA 4EMXA 5FUOA 2AJEA 4I9OA 4PO0A 5IIUA 2CKXA 2I2ZA 3SIUB 1LNSA 4BKEA 3V08A 2BXEA 2I30A 4LUHA 2BXOA 4HGKA 4M70B 2VDBA 1MIWA 3NVKA 2JUHA 1VFIA 2EFDA 2XW1A 1BKEA 1SB0A 4F5SA 2BXGA 2GUTA 1FOUA 4OTTA 4J2VA 2E0YA 3ECPA 3W1SA 3WHSA 5IJFA 2XW0A 3VQIA 2XVQA 1MUHA 4L8UA 3WHQA 4N3ZA 4GDLB 1H5WA 2DBXA 3GQUA 2YDFA 2QMCA 2E0XA 3LU8A 3MHSB 4Z69A 2VUEA 5IFOA 3PLAA 4GDKB 2V36A 3UIVA 1E7HA 4TQ1A 4F5UA 2BXFA 4IW2A 5IIHA 2BXAA 2EFHA 1H9ZA 2BXBA 2OZBB 1E7AA 1AO6A 3ICXA 1N5UA 2Z8IA 2DBWA 5IIXA 4FK5B 3NVIA 4ZCGA 2ROHA 2QM6A 4JK4A 1MUSA 3LU6A 4LUFA 4ZBKA 4LA0A 1UORA 1TF0A 1LOTA 2NQOA 3NVMA 1MM8A 3TDLA 4L9QA 5GIOA 1KXPD 3V03A 2XVUA 4IW1A 2BXPA 2QHBA 1HA2A 1MIYA 4FIPB 2BXQA 1GNIA 4S1YA 4LB2A 1E7CA 2DYOA 2KWFA 2XVWA 1O9XA 3GQXA 5HOZA 1HK1A 1MIVA 5GINA 5GHKA 4E99A 4C31B 2BXHA 2K0NA 3V09A 1IJGA 3CX9A 5BPKA 1HK5A 1KDXA 3FWBC 3KIKA 1MA9A 4DHXB 5D7GA 1E7BA 4F5TA 2OT3A 2Z8JA 2AGHB 4W4UB 3JQZA 5GIPA 1NT2B 2BXIA 2LXTA 4D7XA 3GA9L 2VUFA 4G04A 4ZBQA 4DM0A 2BXDA 1GNJA 2DBUA 2LQIA 3KJLA 2BXLA 1VZSA 4OT2A 1TXUA 2EFEA 4FJCB 4K71A 4L9KA 1HK4A 3B9MA 4N0FD 2BX8A 4ZC6A 2NNWA 5ID9A 3LU7A 4ZUXV 2BXCA 3MHHB
chains in the Genus database with same CATH topology
1HK3A 1E7GA 2DYMA 1E7EA 2Z8KA 3FNMA 3JRYA 4G01A 4F5VA 4K2CA 3SQJA 2KBZA 2XSIA 4N0UD 4NAWB 4BY9C 1E7IA 1JNBA 1J7EA 2XVVA 3H3AA 4LB9A 4ZBRA 4GG2A 3NMUA 1J78A 1HK2A 2BXNA 5DBYA 2LOQA 1E7FA 4OR0A 3WHRA 2EFCA 3B9LA 4GDXA 3SIVB 1BJ5A 5IJEA 4MBEC 3G9KD 5DQFA 3A75A 2BXMA 3M99C 4Z9OA 4TQ0A 1BM0A 5B5TA 5IJ5A 4G03A 3FWCC 4HGMB 1KW2A 2BXKA 3A73A 3H37A 4OTUA 5ID7A 1E78A 4WA6B 2DG5A 2XMOA 4EMXA 5FUOA 2AJEA 4PO0A 5IIUA 3SIUB 2CKXA 2I2ZA 1LNSA 4BKEA 3V08A 2BXEA 2I30A 4LUHA 2BXOA 4HGKA 4M70B 2VDBA 1MIWA 3NVKA 2JUHA 1VFIA 2EFDA 2XW1A 1BKEA 4F5SA 2BXGA 1FOUA 4OTTA 4J2VA 2E0YA 3W1SA 3WHSA 5IJFA 2XW0A 3VQIA 2XVQA 4L8UA 3WHQA 4N3ZA 4GDLB 1H5WA 2DBXA 3GQUA 2YDFA 2QMCA 2E0XA 3LU8A 3MHSB 4Z69A 2VUEA 5IFOA 3PLAA 4GDKB 2V36A 3UIVA 1E7HA 4TQ1A 4F5UA 2BXFA 4IW2A 5IIHA 2BXAA 2EFHA 1H9ZA 2BXBA 2OZBB 1E7AA 1AO6A 3ICXA 1N5UA 2Z8IA 2DBWA 5IIXA 4FK5B 3NVIA 4ZCGA 2ROHA 2QM6A 4JK4A 3LU6A 4LUFA 4ZBKA 4LA0A 1UORA 1TF0A 1LOTA 2NQOA 3NVMA 3TDLA 4L9QA 5GIOA 1KXPD 3V03A 2XVUA 4IW1A 2BXPA 2QHBA 1HA2A 1MIYA 4FIPB 2BXQA 1GNIA 4S1YA 4LB2A 1E7CA 2DYOA 2XVWA 1O9XA 3GQXA 5HOZA 1HK1A 1MIVA 5GINA 5GHKA 4E99A 4C31B 2BXHA 3V09A 1IJGA 3CX9A 5BPKA 1HK5A 3FWBC 3KIKA 1MA9A 4DHXB 5D7GA 1E7BA 4F5TA 2OT3A 2Z8JA 4W4UB 3JQZA 5GIPA 1NT2B 2BXIA 3GA9L 2VUFA 4G04A 4ZBQA 2BXDA 1GNJA 2DBUA 3KJLA 4OT2A 2BXLA 1VZSA 1TXUA 2EFEA 4FJCB 4K71A 4L9KA 1HK4A 3B9MA 4N0FD 2BX8A 4ZC6A 2NNWA 5ID9A 3LU7A 4ZUXV 2BXCA 3MHHB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HK3 A;  1E7G A;  4F5V A;  1E7E A;  3JRY A;  4K2C A;  3SQJ A;  2XSI A;  4N0U D;  1E7I A;  1J7E A;  2XVV A;  4LB9 A;  4ZBR A;  1J78 A;  1HK2 A;  2BXN A;  5DBY A;  1E7F A;  4OR0 A;  3B9L A;  1BJ5 A;  5IJE A;  5DQF A;  2BXM A;  1BM0 A;  5IJ5 A;  4G03 A;  4HGM B;  1KW2 A;  2BXK A;  3A73 A;  5ID7 A;  1E78 A;  5FUO A;  4EMX A;  4PO0 A;  5IIU A;  2I2Z A;  4BKE A;  3V08 A;  2BXE A;  2I30 A;  4LUH A;  2BXO A;  4HGK A;  2VDB A;  2XW1 A;  1BKE A;  4F5S A;  2BXG A;  4J2V A;  5IJF A;  2XW0 A;  2XVQ A;  4L8U A;  2YDF A;  3LU8 A;  4Z69 A;  2VUE A;  5IFO A;  3UIV A;  1E7H A;  4F5U A;  2BXF A;  4IW2 A;  5IIH A;  2BXA A;  1H9Z A;  2BXB A;  1E7A A;  1AO6 A;  1N5U A;  5IIX A;  4JK4 A;  3LU6 A;  4LUF A;  4LA0 A;  1UOR A;  1TF0 A;  1LOT A;  3TDL A;  4L9Q A;  1KXP D;  3V03 A;  2XVU A;  4IW1 A;  2BXP A;  1HA2 A;  2BXQ A;  1GNI A;  4S1Y A;  4LB2 A;  1E7C A;  2XVW A;  1O9X A;  5HOZ A;  1HK1 A;  5GHK A;  4E99 A;  2BXH A;  3V09 A;  3CX9 A;  1HK5 A;  1MA9 A;  1E7B A;  4F5T A;  3JQZ A;  2BXI A;  2VUF A;  4G04 A;  4ZBQ A;  2BXD A;  1GNJ A;  4OT2 A;  2BXL A;  4L9K A;  4K71 A;  4N0F D;  1HK4 A;  3B9M A;  5ID9 A;  2BX8 A;  3LU7 A;  2BXC A; 
#chains in the Genus database with same CATH topology
 1HK3 A;  1E7G A;  2DYM A;  1E7E A;  2Z8K A;  3FNM A;  3JRY A;  4G01 A;  3BPJ A;  4F5V A;  4K2C A;  3SQJ A;  2KBZ A;  2XSI A;  4N0U D;  4NAW B;  4BY9 C;  1E7I A;  1JNB A;  1J7E A;  2XVV A;  3H3A A;  4LB9 A;  4ZBR A;  4GG2 A;  2LQH A;  3NMU A;  1J78 A;  1HK2 A;  2BXN A;  5DBY A;  2LOQ A;  1E7F A;  4OR0 A;  3WHR A;  2EFC A;  2LXS A;  3B9L A;  4GDX A;  3SIV B;  1BJ5 A;  5IJE A;  4MBE C;  3G9K D;  5DQF A;  3A75 A;  2BXM A;  3M99 C;  4Z9O A;  4TQ0 A;  1BM0 A;  5B5T A;  5IJ5 A;  4G03 A;  3FWC C;  4HGM B;  1KW2 A;  2BXK A;  3A73 A;  3H37 A;  4OTU A;  5ID7 A;  1E78 A;  4WA6 B;  2DG5 A;  2XMO A;  4EMX A;  5FUO A;  2AJE A;  4I9O A;  4PO0 A;  5IIU A;  2CKX A;  2I2Z A;  3SIU B;  1LNS A;  4BKE A;  3V08 A;  2BXE A;  2I30 A;  4LUH A;  2BXO A;  4HGK A;  4M70 B;  2VDB A;  1MIW A;  3NVK A;  2JUH A;  1VFI A;  2EFD A;  2XW1 A;  1BKE A;  1SB0 A;  4F5S A;  2BXG A;  2GUT A;  1FOU A;  4OTT A;  4J2V A;  2E0Y A;  3ECP A;  3W1S A;  3WHS A;  5IJF A;  2XW0 A;  3VQI A;  2XVQ A;  1MUH A;  4L8U A;  3WHQ A;  4N3Z A;  4GDL B;  1H5W A;  2DBX A;  3GQU A;  2YDF A;  2QMC A;  2E0X A;  3LU8 A;  3MHS B;  4Z69 A;  2VUE A;  5IFO A;  3PLA A;  4GDK B;  2V36 A;  3UIV A;  1E7H A;  4TQ1 A;  4F5U A;  2BXF A;  4IW2 A;  5IIH A;  2BXA A;  2EFH A;  1H9Z A;  2BXB A;  2OZB B;  1E7A A;  1AO6 A;  3ICX A;  1N5U A;  2Z8I A;  2DBW A;  5IIX A;  4FK5 B;  3NVI A;  4ZCG A;  2ROH A;  2QM6 A;  4JK4 A;  1MUS A;  3LU6 A;  4LUF A;  4ZBK A;  4LA0 A;  1UOR A;  1TF0 A;  1LOT A;  2NQO A;  3NVM A;  1MM8 A;  3TDL A;  4L9Q A;  5GIO A;  1KXP D;  3V03 A;  2XVU A;  4IW1 A;  2BXP A;  2QHB A;  1HA2 A;  1MIY A;  4FIP B;  2BXQ A;  1GNI A;  4S1Y A;  4LB2 A;  1E7C A;  2DYO A;  2KWF A;  2XVW A;  1O9X A;  3GQX A;  5HOZ A;  1HK1 A;  1MIV A;  5GIN A;  5GHK A;  4E99 A;  4C31 B;  2BXH A;  2K0N A;  3V09 A;  1IJG A;  3CX9 A;  5BPK A;  1HK5 A;  1KDX A;  3FWB C;  3KIK A;  1MA9 A;  4DHX B;  5D7G A;  1E7B A;  4F5T A;  2OT3 A;  2Z8J A;  2AGH B;  4W4U B;  3JQZ A;  5GIP A;  1NT2 B;  2BXI A;  2LXT A;  4D7X A;  3GA9 L;  2VUF A;  4G04 A;  4ZBQ A;  4DM0 A;  2BXD A;  1GNJ A;  2DBU A;  2LQI A;  3KJL A;  2BXL A;  1VZS A;  4OT2 A;  1TXU A;  2EFE A;  4FJC B;  4K71 A;  4L9K A;  1HK4 A;  3B9M A;  4N0F D;  2BX8 A;  4ZC6 A;  2NNW A;  5ID9 A;  3LU7 A;  4ZUX V;  2BXC A;  3MHH B; 
#chains in the Genus database with same CATH homology
 1HK3 A;  1E7G A;  2DYM A;  1E7E A;  2Z8K A;  3FNM A;  3JRY A;  4G01 A;  4F5V A;  4K2C A;  3SQJ A;  2KBZ A;  2XSI A;  4N0U D;  4NAW B;  4BY9 C;  1E7I A;  1JNB A;  1J7E A;  2XVV A;  3H3A A;  4LB9 A;  4ZBR A;  4GG2 A;  3NMU A;  1J78 A;  1HK2 A;  2BXN A;  5DBY A;  2LOQ A;  1E7F A;  4OR0 A;  3WHR A;  2EFC A;  3B9L A;  4GDX A;  3SIV B;  1BJ5 A;  5IJE A;  4MBE C;  3G9K D;  5DQF A;  3A75 A;  2BXM A;  3M99 C;  4Z9O A;  4TQ0 A;  1BM0 A;  5B5T A;  5IJ5 A;  4G03 A;  3FWC C;  4HGM B;  1KW2 A;  2BXK A;  3A73 A;  3H37 A;  4OTU A;  5ID7 A;  1E78 A;  4WA6 B;  2DG5 A;  2XMO A;  4EMX A;  5FUO A;  2AJE A;  4PO0 A;  5IIU A;  3SIU B;  2CKX A;  2I2Z A;  1LNS A;  4BKE A;  3V08 A;  2BXE A;  2I30 A;  4LUH A;  2BXO A;  4HGK A;  4M70 B;  2VDB A;  1MIW A;  3NVK A;  2JUH A;  1VFI A;  2EFD A;  2XW1 A;  1BKE A;  4F5S A;  2BXG A;  1FOU A;  4OTT A;  4J2V A;  2E0Y A;  3W1S A;  3WHS A;  5IJF A;  2XW0 A;  3VQI A;  2XVQ A;  4L8U A;  3WHQ A;  4N3Z A;  4GDL B;  1H5W A;  2DBX A;  3GQU A;  2YDF A;  2QMC A;  2E0X A;  3LU8 A;  3MHS B;  4Z69 A;  2VUE A;  5IFO A;  3PLA A;  4GDK B;  2V36 A;  3UIV A;  1E7H A;  4TQ1 A;  4F5U A;  2BXF A;  4IW2 A;  5IIH A;  2BXA A;  2EFH A;  1H9Z A;  2BXB A;  2OZB B;  1E7A A;  1AO6 A;  3ICX A;  1N5U A;  2Z8I A;  2DBW A;  5IIX A;  4FK5 B;  3NVI A;  4ZCG A;  2ROH A;  2QM6 A;  4JK4 A;  3LU6 A;  4LUF A;  4ZBK A;  4LA0 A;  1UOR A;  1TF0 A;  1LOT A;  2NQO A;  3NVM A;  3TDL A;  4L9Q A;  5GIO A;  1KXP D;  3V03 A;  2XVU A;  4IW1 A;  2BXP A;  2QHB A;  1HA2 A;  1MIY A;  4FIP B;  2BXQ A;  1GNI A;  4S1Y A;  4LB2 A;  1E7C A;  2DYO A;  2XVW A;  1O9X A;  3GQX A;  5HOZ A;  1HK1 A;  1MIV A;  5GIN A;  5GHK A;  4E99 A;  4C31 B;  2BXH A;  3V09 A;  1IJG A;  3CX9 A;  5BPK A;  1HK5 A;  3FWB C;  3KIK A;  1MA9 A;  4DHX B;  5D7G A;  1E7B A;  4F5T A;  2OT3 A;  2Z8J A;  4W4U B;  3JQZ A;  5GIP A;  1NT2 B;  2BXI A;  3GA9 L;  2VUF A;  4G04 A;  4ZBQ A;  2BXD A;  1GNJ A;  2DBU A;  3KJL A;  4OT2 A;  2BXL A;  1VZS A;  1TXU A;  2EFE A;  4FJC B;  4K71 A;  4L9K A;  1HK4 A;  3B9M A;  4N0F D;  2BX8 A;  4ZC6 A;  2NNW A;  5ID9 A;  3LU7 A;  4ZUX V;  2BXC A;  3MHH B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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