4F5UA

Crystal structure of equine serum albumin at 2.04 resolution
Total Genus 247
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
247
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords Serum albumin
publication title Structures of bovine, equine and leporine serum albumin.
pubmed doi rcsb
total genus 247
structure length 583
sequence length 583
ec nomenclature
pdb deposition date 2012-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5uA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5uA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5uA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5uA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5uA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4f5uA05
4ZBRA 4LUFA 1KXPD 2BXEA 2XSIA 5ID7A 5DQFA 4K71A 2I2ZA 2VUEA 1BJ5A 4G04A 1HK4A 1N5UA 1J78A 5DBYA 3SQJA 3CX9A 5IIHA 1HK1A 2BXNA 4IW1A 3TDLA 3V09A 4S1YA 1J7EA 5IJFA 3B9MA 4OR0A 1E7CA 1UORA 4G03A 2BXQA 4E99A 1LOTA 1HA2A 4F5SA 1E7IA 5IJ5A 4Z69A 2XW0A 2BXMA 3V08A 4L9KA 1E7BA 1O9XA 2BXOA 5IJEA 1HK3A 3B9LA 5FUOA 2BXLA 1AO6A 2BXGA 4ZBQA 1E7FA 2I30A 2XVUA 2BXIA 4LB2A 2XW1A 3JQZA 4F5UA 2YDFA 4K2CA 4EMXA 5ID9A 2BXDA 2BXPA 2XVVA 4LA0A 3LU7A 1E7AA 4N0FD 5IIXA 2BXCA 1GNJA 4PO0A 3V03A 1H9ZA 1TF0A 1BKEA 2BXHA 5HOZA 2BXFA 5GHKA 5IIUA 1MA9A 2BX8A 4J2VA 4HGMB 4IW2A 2VUFA 3JRYA 4L8UA 3LU8A 4HGKA 4F5TA 1KW2A 4LUHA 1E7GA 2BXKA 4OT2A 1E7HA 2XVWA 4JK4A 4N0UD 3A73A 1BM0A 4F5VA 2BXBA 1HK5A 1E78A 3UIVA 1HK2A 2VDBA 4L9QA 5IFOA 1E7EA 3LU6A 1GNIA 2XVQA 4LB9A 4BKEA 2BXAA
chains in the Genus database with same CATH superfamily
4ZBRA 4LUFA 1MUHA 1KXPD 2BXEA 4DM0A 3ECPA 2XSIA 5ID7A 2JUHA 5DQFA 2NNWA 3W1SA 2QM6A 3GQUA 4K71A 4M70B 3NVKA 2I2ZA 2VUEA 5B5TA 1BJ5A 4G04A 1HK4A 3BPJA 3KIKA 1MUSA 1N5UA 1J78A 5DBYA 2LQIA 3SQJA 3CX9A 1FOUA 4BY9C 2DYOA 5IIHA 2EFDA 1HK1A 2BXNA 4IW1A 3GA9L 4GDKB 3TDLA 3V09A 2EFEA 4S1YA 1J7EA 3FWCC 5IJFA 3B9MA 5GIPA 4OR0A 1E7CA 4FJCB 2XMOA 1UORA 2EFCA 2LXSA 4G03A 2DG5A 5GIOA 4WA6B 2BXQA 4E99A 1LOTA 4GG2A 1HA2A 4F5SA 2OT3A 1E7IA 5IJ5A 2V36A 1IJGA 3G9KD 4Z69A 2XW0A 4C31B 2BXMA 3V08A 3H3AA 4L9KA 1E7BA 1O9XA 2BXOA 5IJEA 3WHRA 1HK3A 1VZSA 3B9LA 5FUOA 2BXLA 1AO6A 3NVIA 1MIYA 2KWFA 2BXGA 4ZBQA 4MBEC 1E7FA 1SB0A 3GQXA 3VQIA 4NAWB 2I30A 2XVUA 2BXIA 4LB2A 5BPKA 4ZUXV 2XW1A 3JQZA 5D7GA 3SIVB 2Z8KA 3MHHB 1H5WA 2YDFA 4F5UA 1MIWA 4K2CA 4EMXA 2NQOA 2LQHA 2DYMA 3M99C 4ZBKA 2K0NA 5ID9A 2BXDA 2BXPA 1LNSA 2XVVA 1MM8A 3ICXA 2Z8JA 4LA0A 4TQ1A 1KDXA 1JNBA 3LU7A 1E7AA 3A75A 4N0FD 5IIXA 2CKXA 2BXCA 1GNJA 4OTUA 4DHXB 4PO0A 3V03A 2QHBA 1H9ZA 4FIPB 2DBWA 1TF0A 1BKEA 2BXHA 1MIVA 5HOZA 5GINA 2LOQA 2BXFA 5GHKA 5IIUA 1MA9A 1TXUA 4GDLB 2BX8A 3KJLA 3PLAA 4FK5B 1NT2B 3H37A 4J2VA 2Z8IA 4HGMB 4IW2A 2DBUA 2VUFA 2AGHB 1VFIA 2ROHA 3JRYA 4ZC6A 3WHQA 4I9OA 4L8UA 2E0XA 3LU8A 4HGKA 2QMCA 2GUTA 4F5TA 1KW2A 3MHSB 1E7GA 4LUHA 2BXKA 3NVMA 4OT2A 1E7HA 2XVWA 4JK4A 2E0YA 4N0UD 3A73A 4TQ0A 1BM0A 4F5VA 2BXBA 4D7XA 4W4UB 3NMUA 2OZBB 1HK5A 1E78A 3UIVA 1HK2A 2AJEA 2KBZA 3FNMA 4N3ZA 4G01A 2VDBA 4L9QA 5IFOA 2LXTA 2EFHA 1E7EA 3LU6A 3WHSA 4ZCGA 1GNIA 2XVQA 4LB9A 4BKEA 4OTTA 2BXAA 4Z9OA 4GDXA 2DBXA 3FWBC 3SIUB
chains in the Genus database with same CATH topology
4ZBRA 4LUFA 1KXPD 2BXEA 2XSIA 5ID7A 2JUHA 5DQFA 2NNWA 3W1SA 2QM6A 3GQUA 4K71A 4M70B 3NVKA 2I2ZA 2VUEA 5B5TA 1BJ5A 4G04A 1HK4A 3KIKA 1N5UA 1J78A 5DBYA 3SQJA 3CX9A 1FOUA 4BY9C 2DYOA 5IIHA 2EFDA 1HK1A 2BXNA 4IW1A 3GA9L 4GDKB 3TDLA 3V09A 2EFEA 4S1YA 1J7EA 3FWCC 5IJFA 3B9MA 5GIPA 4OR0A 1E7CA 4FJCB 2XMOA 1UORA 2EFCA 4G03A 2DG5A 5GIOA 4WA6B 2BXQA 4E99A 1LOTA 4GG2A 1HA2A 4F5SA 2OT3A 1E7IA 5IJ5A 2V36A 1IJGA 3G9KD 4Z69A 2XW0A 4C31B 2BXMA 3V08A 3H3AA 4L9KA 1E7BA 1O9XA 2BXOA 5IJEA 3WHRA 1HK3A 1VZSA 3B9LA 5FUOA 2BXLA 1AO6A 3NVIA 1MIYA 2BXGA 4ZBQA 4MBEC 1E7FA 3GQXA 3VQIA 4NAWB 2I30A 2XVUA 2BXIA 4LB2A 5BPKA 4ZUXV 2XW1A 3JQZA 5D7GA 3SIVB 2Z8KA 3MHHB 1H5WA 2YDFA 4F5UA 1MIWA 4K2CA 4EMXA 2NQOA 3M99C 2DYMA 4ZBKA 5ID9A 2BXDA 2BXPA 1LNSA 2XVVA 3ICXA 2Z8JA 4LA0A 4TQ1A 1JNBA 3LU7A 1E7AA 3A75A 4N0FD 5IIXA 2CKXA 2BXCA 1GNJA 4OTUA 4DHXB 4PO0A 3V03A 2QHBA 1H9ZA 4FIPB 2DBWA 1TF0A 1BKEA 2BXHA 1MIVA 5HOZA 5GINA 2LOQA 2BXFA 5GHKA 5IIUA 1MA9A 1TXUA 4GDLB 2BX8A 3KJLA 3PLAA 4FK5B 1NT2B 3H37A 4J2VA 2Z8IA 4HGMB 4IW2A 2DBUA 2VUFA 1VFIA 2ROHA 3JRYA 4ZC6A 3WHQA 4L8UA 2E0XA 3LU8A 4HGKA 2QMCA 4F5TA 1KW2A 3MHSB 1E7GA 4LUHA 2BXKA 3NVMA 4OT2A 1E7HA 2XVWA 4JK4A 2E0YA 4N0UD 3A73A 4TQ0A 1BM0A 4F5VA 2BXBA 4W4UB 3NMUA 2OZBB 1HK5A 1E78A 3UIVA 1HK2A 2AJEA 2KBZA 3FNMA 4N3ZA 4G01A 2VDBA 4L9QA 5IFOA 2EFHA 1E7EA 3LU6A 3WHSA 4ZCGA 1GNIA 2XVQA 4LB9A 4BKEA 4OTTA 2BXAA 4Z9OA 4GDXA 2DBXA 3FWBC 3SIUB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZBR A;  4LUF A;  1KXP D;  2BXE A;  2XSI A;  5ID7 A;  5DQF A;  4K71 A;  2I2Z A;  2VUE A;  1BJ5 A;  4G04 A;  1HK4 A;  1N5U A;  1J78 A;  5DBY A;  3SQJ A;  3CX9 A;  5IIH A;  1HK1 A;  2BXN A;  4IW1 A;  3TDL A;  3V09 A;  4S1Y A;  1J7E A;  5IJF A;  3B9M A;  4OR0 A;  1E7C A;  1UOR A;  4G03 A;  2BXQ A;  4E99 A;  1LOT A;  1HA2 A;  4F5S A;  1E7I A;  5IJ5 A;  4Z69 A;  2XW0 A;  2BXM A;  3V08 A;  4L9K A;  1E7B A;  1O9X A;  2BXO A;  5IJE A;  1HK3 A;  3B9L A;  5FUO A;  2BXL A;  1AO6 A;  2BXG A;  4ZBQ A;  1E7F A;  2I30 A;  2XVU A;  2BXI A;  4LB2 A;  2XW1 A;  3JQZ A;  4F5U A;  2YDF A;  4K2C A;  4EMX A;  5ID9 A;  2BXD A;  2BXP A;  2XVV A;  4LA0 A;  3LU7 A;  1E7A A;  4N0F D;  5IIX A;  2BXC A;  1GNJ A;  4PO0 A;  3V03 A;  1H9Z A;  1TF0 A;  1BKE A;  2BXH A;  5HOZ A;  2BXF A;  5GHK A;  5IIU A;  1MA9 A;  2BX8 A;  4J2V A;  4HGM B;  4IW2 A;  2VUF A;  3JRY A;  4L8U A;  3LU8 A;  4HGK A;  4F5T A;  1KW2 A;  4LUH A;  1E7G A;  2BXK A;  4OT2 A;  1E7H A;  2XVW A;  4JK4 A;  4N0U D;  3A73 A;  1BM0 A;  4F5V A;  2BXB A;  1HK5 A;  1E78 A;  3UIV A;  1HK2 A;  2VDB A;  4L9Q A;  5IFO A;  1E7E A;  3LU6 A;  1GNI A;  2XVQ A;  4LB9 A;  4BKE A;  2BXA A; 
#chains in the Genus database with same CATH topology
 4ZBR A;  4LUF A;  1MUH A;  1KXP D;  2BXE A;  4DM0 A;  3ECP A;  2XSI A;  5ID7 A;  2JUH A;  5DQF A;  2NNW A;  3W1S A;  2QM6 A;  3GQU A;  4K71 A;  4M70 B;  3NVK A;  2I2Z A;  2VUE A;  5B5T A;  1BJ5 A;  4G04 A;  1HK4 A;  3BPJ A;  3KIK A;  1MUS A;  1N5U A;  1J78 A;  5DBY A;  2LQI A;  3SQJ A;  3CX9 A;  1FOU A;  4BY9 C;  2DYO A;  5IIH A;  2EFD A;  1HK1 A;  2BXN A;  4IW1 A;  3GA9 L;  4GDK B;  3TDL A;  3V09 A;  2EFE A;  4S1Y A;  1J7E A;  3FWC C;  5IJF A;  3B9M A;  5GIP A;  4OR0 A;  1E7C A;  4FJC B;  2XMO A;  1UOR A;  2EFC A;  2LXS A;  4G03 A;  2DG5 A;  5GIO A;  4WA6 B;  2BXQ A;  4E99 A;  1LOT A;  4GG2 A;  1HA2 A;  4F5S A;  2OT3 A;  1E7I A;  5IJ5 A;  2V36 A;  1IJG A;  3G9K D;  4Z69 A;  2XW0 A;  4C31 B;  2BXM A;  3V08 A;  3H3A A;  4L9K A;  1E7B A;  1O9X A;  2BXO A;  5IJE A;  3WHR A;  1HK3 A;  1VZS A;  3B9L A;  5FUO A;  2BXL A;  1AO6 A;  3NVI A;  1MIY A;  2KWF A;  2BXG A;  4ZBQ A;  4MBE C;  1E7F A;  1SB0 A;  3GQX A;  3VQI A;  4NAW B;  2I30 A;  2XVU A;  2BXI A;  4LB2 A;  5BPK A;  4ZUX V;  2XW1 A;  3JQZ A;  5D7G A;  3SIV B;  2Z8K A;  3MHH B;  1H5W A;  2YDF A;  4F5U A;  1MIW A;  4K2C A;  4EMX A;  2NQO A;  2LQH A;  2DYM A;  3M99 C;  4ZBK A;  2K0N A;  5ID9 A;  2BXD A;  2BXP A;  1LNS A;  2XVV A;  1MM8 A;  3ICX A;  2Z8J A;  4LA0 A;  4TQ1 A;  1KDX A;  1JNB A;  3LU7 A;  1E7A A;  3A75 A;  4N0F D;  5IIX A;  2CKX A;  2BXC A;  1GNJ A;  4OTU A;  4DHX B;  4PO0 A;  3V03 A;  2QHB A;  1H9Z A;  4FIP B;  2DBW A;  1TF0 A;  1BKE A;  2BXH A;  1MIV A;  5HOZ A;  5GIN A;  2LOQ A;  2BXF A;  5GHK A;  5IIU A;  1MA9 A;  1TXU A;  4GDL B;  2BX8 A;  3KJL A;  3PLA A;  4FK5 B;  1NT2 B;  3H37 A;  4J2V A;  2Z8I A;  4HGM B;  4IW2 A;  2DBU A;  2VUF A;  2AGH B;  1VFI A;  2ROH A;  3JRY A;  4ZC6 A;  3WHQ A;  4I9O A;  4L8U A;  2E0X A;  3LU8 A;  4HGK A;  2QMC A;  2GUT A;  4F5T A;  1KW2 A;  3MHS B;  1E7G A;  4LUH A;  2BXK A;  3NVM A;  4OT2 A;  1E7H A;  2XVW A;  4JK4 A;  2E0Y A;  4N0U D;  3A73 A;  4TQ0 A;  1BM0 A;  4F5V A;  2BXB A;  4D7X A;  4W4U B;  3NMU A;  2OZB B;  1HK5 A;  1E78 A;  3UIV A;  1HK2 A;  2AJE A;  2KBZ A;  3FNM A;  4N3Z A;  4G01 A;  2VDB A;  4L9Q A;  5IFO A;  2LXT A;  2EFH A;  1E7E A;  3LU6 A;  3WHS A;  4ZCG A;  1GNI A;  2XVQ A;  4LB9 A;  4BKE A;  4OTT A;  2BXA A;  4Z9O A;  4GDX A;  2DBX A;  3FWB C;  3SIU B; 
#chains in the Genus database with same CATH homology
 4ZBR A;  4LUF A;  1KXP D;  2BXE A;  2XSI A;  5ID7 A;  2JUH A;  5DQF A;  2NNW A;  3W1S A;  2QM6 A;  3GQU A;  4K71 A;  4M70 B;  3NVK A;  2I2Z A;  2VUE A;  5B5T A;  1BJ5 A;  4G04 A;  1HK4 A;  3KIK A;  1N5U A;  1J78 A;  5DBY A;  3SQJ A;  3CX9 A;  1FOU A;  4BY9 C;  2DYO A;  5IIH A;  2EFD A;  1HK1 A;  2BXN A;  4IW1 A;  3GA9 L;  4GDK B;  3TDL A;  3V09 A;  2EFE A;  4S1Y A;  1J7E A;  3FWC C;  5IJF A;  3B9M A;  5GIP A;  4OR0 A;  1E7C A;  4FJC B;  2XMO A;  1UOR A;  2EFC A;  4G03 A;  2DG5 A;  5GIO A;  4WA6 B;  2BXQ A;  4E99 A;  1LOT A;  4GG2 A;  1HA2 A;  4F5S A;  2OT3 A;  1E7I A;  5IJ5 A;  2V36 A;  1IJG A;  3G9K D;  4Z69 A;  2XW0 A;  4C31 B;  2BXM A;  3V08 A;  3H3A A;  4L9K A;  1E7B A;  1O9X A;  2BXO A;  5IJE A;  3WHR A;  1HK3 A;  1VZS A;  3B9L A;  5FUO A;  2BXL A;  1AO6 A;  3NVI A;  1MIY A;  2BXG A;  4ZBQ A;  4MBE C;  1E7F A;  3GQX A;  3VQI A;  4NAW B;  2I30 A;  2XVU A;  2BXI A;  4LB2 A;  5BPK A;  4ZUX V;  2XW1 A;  3JQZ A;  5D7G A;  3SIV B;  2Z8K A;  3MHH B;  1H5W A;  2YDF A;  4F5U A;  1MIW A;  4K2C A;  4EMX A;  2NQO A;  3M99 C;  2DYM A;  4ZBK A;  5ID9 A;  2BXD A;  2BXP A;  1LNS A;  2XVV A;  3ICX A;  2Z8J A;  4LA0 A;  4TQ1 A;  1JNB A;  3LU7 A;  1E7A A;  3A75 A;  4N0F D;  5IIX A;  2CKX A;  2BXC A;  1GNJ A;  4OTU A;  4DHX B;  4PO0 A;  3V03 A;  2QHB A;  1H9Z A;  4FIP B;  2DBW A;  1TF0 A;  1BKE A;  2BXH A;  1MIV A;  5HOZ A;  5GIN A;  2LOQ A;  2BXF A;  5GHK A;  5IIU A;  1MA9 A;  1TXU A;  4GDL B;  2BX8 A;  3KJL A;  3PLA A;  4FK5 B;  1NT2 B;  3H37 A;  4J2V A;  2Z8I A;  4HGM B;  4IW2 A;  2DBU A;  2VUF A;  1VFI A;  2ROH A;  3JRY A;  4ZC6 A;  3WHQ A;  4L8U A;  2E0X A;  3LU8 A;  4HGK A;  2QMC A;  4F5T A;  1KW2 A;  3MHS B;  1E7G A;  4LUH A;  2BXK A;  3NVM A;  4OT2 A;  1E7H A;  2XVW A;  4JK4 A;  2E0Y A;  4N0U D;  3A73 A;  4TQ0 A;  1BM0 A;  4F5V A;  2BXB A;  4W4U B;  3NMU A;  2OZB B;  1HK5 A;  1E78 A;  3UIV A;  1HK2 A;  2AJE A;  2KBZ A;  3FNM A;  4N3Z A;  4G01 A;  2VDB A;  4L9Q A;  5IFO A;  2EFH A;  1E7E A;  3LU6 A;  3WHS A;  4ZCG A;  1GNI A;  2XVQ A;  4LB9 A;  4BKE A;  4OTT A;  2BXA A;  4Z9O A;  4GDX A;  2DBX A;  3FWB C;  3SIU B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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