4LUFA

Crystal structure of ovine serum albumin
Total Genus 246
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
246
sequence length
583
structure length
583
Chain Sequence
DTHKSEIAHRFNDLGEENFQGLVLIAFSQYLQQCPFDEHVKLVKELTEFAKTCVADESHAGCDKSLHTLFGDELCKVATLRETYGDMADCCEKQEPERNECFLNHKDDSPDLPKLKPEPDTLCAEFKADEKKFWGKYLYEVARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIDAMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKADFTDVTKIVTDLTKVHKECCHGDLLECADDRADLAKYICDHQDALSSKLKECCDKPVLEKSHCIAEVDKDAVPENLPPLTADFAEDKEVCKNYQEAKDVFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEDCCAKEDPHACYATVFDKLKHLVDEPQNLIKKNCELFEKHGEYGFQNALIVRYTRKAPQVSTPTLVEISRSLGKVGTKCCAKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSDLTLDETYVPKPFDEKFFTFHADICTLPDTEKQIKKQTALVELLKHKPKATDEQLKTVMENFVAFVDKCCAADDKEGCFVLEGPKLVASTQAALA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of ovine serum albumin and its complex with 3,5-diiodosalicylic acid
rcsb
molecule keywords Serum albumin
molecule tags Transport protein
total genus 246
structure length 583
sequence length 583
ec nomenclature
pdb deposition date 2013-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4lufA05
5IIHA 4HGMB 4PO0A 3A73A 3V08A 5IJEA 1HK4A 3LU7A 1KXPD 4BKEA 4OT2A 1HK1A 2BXDA 2BXFA 4OR0A 3JRYA 4G03A 2XW0A 3JQZA 5IJFA 3LU8A 5ID7A 2BXHA 1TF0A 4S1YA 4L9KA 5IIUA 1H9ZA 4K2CA 4IW1A 4N0UD 3CX9A 4L9QA 4F5UA 2BXQA 2BXOA 2BXCA 3UIVA 5IJ5A 3V03A 2VDBA 4ZBRA 3B9LA 2BXPA 3TDLA 1E7AA 3V09A 1N5UA 4LUHA 1E7GA 1GNJA 4L8UA 2BXMA 1J7EA 4J2VA 1E7BA 1LOTA 2BX8A 4E99A 4F5SA 1E7HA 5GHKA 1HK5A 2VUFA 1UORA 2XW1A 2BXLA 2BXKA 1HK2A 1KW2A 2BXGA 1MA9A 5FUOA 5DBYA 1BM0A 1HA2A 1E7IA 1O9XA 1BJ5A 2BXEA 4Z69A 5ID9A 4F5TA 4N0FD 3B9MA 1E7EA 2XVWA 4EMXA 4LA0A 4F5VA 2BXNA 5IFOA 1E7CA 3SQJA 1GNIA 2I2ZA 3LU6A 2BXBA 1J78A 1E78A 5IIXA 2XVQA 5DQFA 1BKEA 2BXIA 4LB9A 4ZBQA 1AO6A 2XVVA 2YDFA 4JK4A 2VUEA 2BXAA 2XSIA 4HGKA 2I30A 1HK3A 4K71A 1E7FA 4IW2A 4LUFA 2XVUA 5HOZA 4G04A 4LB2A
chains in the Genus database with same CATH superfamily
5IIHA 3ICXA 2DBXA 4HGMB 4PO0A 3A73A 3V08A 5IJEA 1HK4A 2NQOA 4FJCB 3LU7A 1KXPD 3GQUA 4BKEA 4OT2A 1FOUA 1HK1A 2BXDA 3W1SA 2DBUA 2BXFA 2NNWA 4OR0A 5D7GA 3JRYA 1IJGA 4G03A 2XW0A 3JQZA 4GDLB 3LU8A 5IJFA 3SIUB 3WHSA 3NVMA 5ID7A 3A75A 5BPKA 2BXHA 1TF0A 4S1YA 2QMCA 4L9KA 2DG5A 3MHHB 5IIUA 1H9ZA 2EFHA 4IW1A 4K2CA 4N3ZA 4N0UD 3CX9A 4FIPB 4L9QA 1MUSA 2LXTA 4F5UA 2BXQA 4TQ0A 2BXOA 1MIWA 2BXCA 2DYMA 2EFEA 3UIVA 4DHXB 5IJ5A 3VQIA 5GINA 3WHRA 3V03A 5GIPA 1TXUA 2VDBA 4ZBRA 2JUHA 1VZSA 3B9LA 3WHQA 2BXPA 3TDLA 1LNSA 1SB0A 1E7AA 3V09A 1N5UA 4DM0A 4LUHA 1E7GA 3MHSB 3FWCC 1GNJA 4M70B 4L8UA 2BXMA 1J7EA 2DYOA 3H37A 4J2VA 1E7BA 3NVIA 2DBWA 1LOTA 2E0YA 2EFCA 4GG2A 4MBEC 2LOQA 2BX8A 3KIKA 2CKXA 2Z8IA 4E99A 4F5SA 2QM6A 1E7HA 2Z8KA 5GHKA 2LXSA 1HK5A 2VUFA 1JNBA 3BPJA 1MIYA 1UORA 2XW1A 4I9OA 4OTTA 2BXLA 2BXKA 4G01A 1HK2A 1KW2A 4NAWB 2AJEA 2BXGA 3PLAA 1MA9A 5FUOA 5DBYA 1BM0A 2LQIA 4WA6B 1HA2A 2AGHB 1E7IA 1O9XA 4W4UB 4ZC6A 2EFDA 2QHBA 2ROHA 1BJ5A 2BXEA 4GDKB 4D7XA 4Z69A 5ID9A 4BY9C 4F5TA 3SIVB 3GQXA 1NT2B 4N0FD 2Z8JA 2LQHA 3B9MA 3H3AA 1E7EA 2XVWA 4EMXA 3FWBC 3M99C 4LA0A 4F5VA 2BXNA 5IFOA 1E7CA 3SQJA 4ZUXV 1GNIA 3GA9L 2KBZA 4GDXA 2I2ZA 4ZBKA 2OZBB 3LU6A 2BXBA 5GIOA 1J78A 1E78A 4FK5B 5IIXA 2XVQA 2KWFA 1MIVA 4TQ1A 4Z9OA 5DQFA 1BKEA 2BXIA 4LB9A 3NMUA 1KDXA 2GUTA 3NVKA 4OTUA 3G9KD 3FNMA 4ZBQA 1AO6A 2E0XA 2XVVA 2YDFA 4JK4A 2VUEA 2BXAA 2XSIA 4ZCGA 3KJLA 1MM8A 4HGKA 1VFIA 5B5TA 2I30A 1MUHA 1HK3A 2OT3A 2V36A 4K71A 1E7FA 4IW2A 3ECPA 4LUFA 2XVUA 1H5WA 5HOZA 4C31B 4G04A 2K0NA 2XMOA 4LB2A
chains in the Genus database with same CATH topology
5IIHA 3ICXA 2DBXA 4HGMB 4PO0A 3A73A 3V08A 5IJEA 1HK4A 2NQOA 4FJCB 3LU7A 1KXPD 3GQUA 4BKEA 4OT2A 1FOUA 1HK1A 2BXDA 3W1SA 2DBUA 2BXFA 2NNWA 4OR0A 5D7GA 3JRYA 1IJGA 4G03A 2XW0A 3JQZA 4GDLB 3LU8A 5IJFA 3SIUB 3WHSA 3NVMA 5ID7A 3A75A 5BPKA 2BXHA 1TF0A 4S1YA 2QMCA 4L9KA 2DG5A 3MHHB 5IIUA 1H9ZA 2EFHA 4IW1A 4K2CA 4N3ZA 4N0UD 3CX9A 4FIPB 4L9QA 4F5UA 2BXQA 4TQ0A 2BXOA 1MIWA 2BXCA 2DYMA 2EFEA 3UIVA 4DHXB 5IJ5A 3VQIA 5GINA 3WHRA 3V03A 5GIPA 1TXUA 2VDBA 4ZBRA 2JUHA 1VZSA 3B9LA 3WHQA 2BXPA 3TDLA 1LNSA 1E7AA 3V09A 1N5UA 4LUHA 1E7GA 3MHSB 3FWCC 1GNJA 4M70B 4L8UA 2BXMA 1J7EA 2DYOA 3H37A 4J2VA 1E7BA 3NVIA 2DBWA 1LOTA 2E0YA 2EFCA 4GG2A 4MBEC 2LOQA 2BX8A 3KIKA 2CKXA 2Z8IA 4E99A 4F5SA 2QM6A 1E7HA 2Z8KA 5GHKA 1HK5A 2VUFA 1JNBA 1MIYA 1UORA 2XW1A 4OTTA 2BXLA 2BXKA 4G01A 1HK2A 1KW2A 4NAWB 2AJEA 2BXGA 3PLAA 1MA9A 5FUOA 5DBYA 1BM0A 4WA6B 1HA2A 1E7IA 1O9XA 4W4UB 4ZC6A 2EFDA 2QHBA 2ROHA 1BJ5A 2BXEA 4GDKB 4BY9C 4Z69A 5ID9A 4F5TA 3SIVB 3GQXA 1NT2B 4N0FD 2Z8JA 3B9MA 3H3AA 1E7EA 2XVWA 4EMXA 3FWBC 3M99C 4LA0A 4F5VA 2BXNA 5IFOA 1E7CA 3SQJA 4ZUXV 1GNIA 3GA9L 2KBZA 4GDXA 2I2ZA 4ZBKA 2OZBB 3LU6A 2BXBA 5GIOA 1J78A 1E78A 4FK5B 5IIXA 2XVQA 4TQ1A 1MIVA 4Z9OA 5DQFA 1BKEA 2BXIA 4LB9A 3NMUA 3NVKA 4OTUA 3G9KD 3FNMA 4ZBQA 1AO6A 2E0XA 2XVVA 2YDFA 4JK4A 2VUEA 2BXAA 2XSIA 4ZCGA 3KJLA 4HGKA 1VFIA 5B5TA 2I30A 1HK3A 2OT3A 2V36A 4K71A 1E7FA 4IW2A 4LUFA 2XVUA 1H5WA 5HOZA 4C31B 4G04A 2XMOA 4LB2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5IIH A;  4HGM B;  4PO0 A;  3A73 A;  3V08 A;  5IJE A;  1HK4 A;  3LU7 A;  1KXP D;  4BKE A;  4OT2 A;  1HK1 A;  2BXD A;  2BXF A;  4OR0 A;  3JRY A;  4G03 A;  2XW0 A;  3JQZ A;  5IJF A;  3LU8 A;  5ID7 A;  2BXH A;  1TF0 A;  4S1Y A;  4L9K A;  5IIU A;  1H9Z A;  4K2C A;  4IW1 A;  4N0U D;  3CX9 A;  4L9Q A;  4F5U A;  2BXQ A;  2BXO A;  2BXC A;  3UIV A;  5IJ5 A;  3V03 A;  2VDB A;  4ZBR A;  3B9L A;  2BXP A;  3TDL A;  1E7A A;  3V09 A;  1N5U A;  4LUH A;  1E7G A;  1GNJ A;  4L8U A;  2BXM A;  1J7E A;  4J2V A;  1E7B A;  1LOT A;  2BX8 A;  4E99 A;  4F5S A;  1E7H A;  5GHK A;  1HK5 A;  2VUF A;  1UOR A;  2XW1 A;  2BXL A;  2BXK A;  1HK2 A;  1KW2 A;  2BXG A;  1MA9 A;  5FUO A;  5DBY A;  1BM0 A;  1HA2 A;  1E7I A;  1O9X A;  1BJ5 A;  2BXE A;  4Z69 A;  5ID9 A;  4F5T A;  4N0F D;  3B9M A;  1E7E A;  2XVW A;  4EMX A;  4LA0 A;  4F5V A;  2BXN A;  5IFO A;  1E7C A;  3SQJ A;  1GNI A;  2I2Z A;  3LU6 A;  2BXB A;  1J78 A;  1E78 A;  5IIX A;  2XVQ A;  5DQF A;  1BKE A;  2BXI A;  4LB9 A;  4ZBQ A;  1AO6 A;  2XVV A;  2YDF A;  4JK4 A;  2VUE A;  2BXA A;  2XSI A;  4HGK A;  2I30 A;  1HK3 A;  4K71 A;  1E7F A;  4IW2 A;  4LUF A;  2XVU A;  5HOZ A;  4G04 A;  4LB2 A; 
#chains in the Genus database with same CATH topology
 5IIH A;  3ICX A;  2DBX A;  4HGM B;  4PO0 A;  3A73 A;  3V08 A;  5IJE A;  1HK4 A;  2NQO A;  4FJC B;  3LU7 A;  1KXP D;  3GQU A;  4BKE A;  4OT2 A;  1FOU A;  1HK1 A;  2BXD A;  3W1S A;  2DBU A;  2BXF A;  2NNW A;  4OR0 A;  5D7G A;  3JRY A;  1IJG A;  4G03 A;  2XW0 A;  3JQZ A;  4GDL B;  3LU8 A;  5IJF A;  3SIU B;  3WHS A;  3NVM A;  5ID7 A;  3A75 A;  5BPK A;  2BXH A;  1TF0 A;  4S1Y A;  2QMC A;  4L9K A;  2DG5 A;  3MHH B;  5IIU A;  1H9Z A;  2EFH A;  4IW1 A;  4K2C A;  4N3Z A;  4N0U D;  3CX9 A;  4FIP B;  4L9Q A;  1MUS A;  2LXT A;  4F5U A;  2BXQ A;  4TQ0 A;  2BXO A;  1MIW A;  2BXC A;  2DYM A;  2EFE A;  3UIV A;  4DHX B;  5IJ5 A;  3VQI A;  5GIN A;  3WHR A;  3V03 A;  5GIP A;  1TXU A;  2VDB A;  4ZBR A;  2JUH A;  1VZS A;  3B9L A;  3WHQ A;  2BXP A;  3TDL A;  1LNS A;  1SB0 A;  1E7A A;  3V09 A;  1N5U A;  4DM0 A;  4LUH A;  1E7G A;  3MHS B;  3FWC C;  1GNJ A;  4M70 B;  4L8U A;  2BXM A;  1J7E A;  2DYO A;  3H37 A;  4J2V A;  1E7B A;  3NVI A;  2DBW A;  1LOT A;  2E0Y A;  2EFC A;  4GG2 A;  4MBE C;  2LOQ A;  2BX8 A;  3KIK A;  2CKX A;  2Z8I A;  4E99 A;  4F5S A;  2QM6 A;  1E7H A;  2Z8K A;  5GHK A;  2LXS A;  1HK5 A;  2VUF A;  1JNB A;  3BPJ A;  1MIY A;  1UOR A;  2XW1 A;  4I9O A;  4OTT A;  2BXL A;  2BXK A;  4G01 A;  1HK2 A;  1KW2 A;  4NAW B;  2AJE A;  2BXG A;  3PLA A;  1MA9 A;  5FUO A;  5DBY A;  1BM0 A;  2LQI A;  4WA6 B;  1HA2 A;  2AGH B;  1E7I A;  1O9X A;  4W4U B;  4ZC6 A;  2EFD A;  2QHB A;  2ROH A;  1BJ5 A;  2BXE A;  4GDK B;  4D7X A;  4Z69 A;  5ID9 A;  4BY9 C;  4F5T A;  3SIV B;  3GQX A;  1NT2 B;  4N0F D;  2Z8J A;  2LQH A;  3B9M A;  3H3A A;  1E7E A;  2XVW A;  4EMX A;  3FWB C;  3M99 C;  4LA0 A;  4F5V A;  2BXN A;  5IFO A;  1E7C A;  3SQJ A;  4ZUX V;  1GNI A;  3GA9 L;  2KBZ A;  4GDX A;  2I2Z A;  4ZBK A;  2OZB B;  3LU6 A;  2BXB A;  5GIO A;  1J78 A;  1E78 A;  4FK5 B;  5IIX A;  2XVQ A;  2KWF A;  1MIV A;  4TQ1 A;  4Z9O A;  5DQF A;  1BKE A;  2BXI A;  4LB9 A;  3NMU A;  1KDX A;  2GUT A;  3NVK A;  4OTU A;  3G9K D;  3FNM A;  4ZBQ A;  1AO6 A;  2E0X A;  2XVV A;  2YDF A;  4JK4 A;  2VUE A;  2BXA A;  2XSI A;  4ZCG A;  3KJL A;  1MM8 A;  4HGK A;  1VFI A;  5B5T A;  2I30 A;  1MUH A;  1HK3 A;  2OT3 A;  2V36 A;  4K71 A;  1E7F A;  4IW2 A;  3ECP A;  4LUF A;  2XVU A;  1H5W A;  5HOZ A;  4C31 B;  4G04 A;  2K0N A;  2XMO A;  4LB2 A; 
#chains in the Genus database with same CATH homology
 5IIH A;  3ICX A;  2DBX A;  4HGM B;  4PO0 A;  3A73 A;  3V08 A;  5IJE A;  1HK4 A;  2NQO A;  4FJC B;  3LU7 A;  1KXP D;  3GQU A;  4BKE A;  4OT2 A;  1FOU A;  1HK1 A;  2BXD A;  3W1S A;  2DBU A;  2BXF A;  2NNW A;  4OR0 A;  5D7G A;  3JRY A;  1IJG A;  4G03 A;  2XW0 A;  3JQZ A;  4GDL B;  3LU8 A;  5IJF A;  3SIU B;  3WHS A;  3NVM A;  5ID7 A;  3A75 A;  5BPK A;  2BXH A;  1TF0 A;  4S1Y A;  2QMC A;  4L9K A;  2DG5 A;  3MHH B;  5IIU A;  1H9Z A;  2EFH A;  4IW1 A;  4K2C A;  4N3Z A;  4N0U D;  3CX9 A;  4FIP B;  4L9Q A;  4F5U A;  2BXQ A;  4TQ0 A;  2BXO A;  1MIW A;  2BXC A;  2DYM A;  2EFE A;  3UIV A;  4DHX B;  5IJ5 A;  3VQI A;  5GIN A;  3WHR A;  3V03 A;  5GIP A;  1TXU A;  2VDB A;  4ZBR A;  2JUH A;  1VZS A;  3B9L A;  3WHQ A;  2BXP A;  3TDL A;  1LNS A;  1E7A A;  3V09 A;  1N5U A;  4LUH A;  1E7G A;  3MHS B;  3FWC C;  1GNJ A;  4M70 B;  4L8U A;  2BXM A;  1J7E A;  2DYO A;  3H37 A;  4J2V A;  1E7B A;  3NVI A;  2DBW A;  1LOT A;  2E0Y A;  2EFC A;  4GG2 A;  4MBE C;  2LOQ A;  2BX8 A;  3KIK A;  2CKX A;  2Z8I A;  4E99 A;  4F5S A;  2QM6 A;  1E7H A;  2Z8K A;  5GHK A;  1HK5 A;  2VUF A;  1JNB A;  1MIY A;  1UOR A;  2XW1 A;  4OTT A;  2BXL A;  2BXK A;  4G01 A;  1HK2 A;  1KW2 A;  4NAW B;  2AJE A;  2BXG A;  3PLA A;  1MA9 A;  5FUO A;  5DBY A;  1BM0 A;  4WA6 B;  1HA2 A;  1E7I A;  1O9X A;  4W4U B;  4ZC6 A;  2EFD A;  2QHB A;  2ROH A;  1BJ5 A;  2BXE A;  4GDK B;  4BY9 C;  4Z69 A;  5ID9 A;  4F5T A;  3SIV B;  3GQX A;  1NT2 B;  4N0F D;  2Z8J A;  3B9M A;  3H3A A;  1E7E A;  2XVW A;  4EMX A;  3FWB C;  3M99 C;  4LA0 A;  4F5V A;  2BXN A;  5IFO A;  1E7C A;  3SQJ A;  4ZUX V;  1GNI A;  3GA9 L;  2KBZ A;  4GDX A;  2I2Z A;  4ZBK A;  2OZB B;  3LU6 A;  2BXB A;  5GIO A;  1J78 A;  1E78 A;  4FK5 B;  5IIX A;  2XVQ A;  4TQ1 A;  1MIV A;  4Z9O A;  5DQF A;  1BKE A;  2BXI A;  4LB9 A;  3NMU A;  3NVK A;  4OTU A;  3G9K D;  3FNM A;  4ZBQ A;  1AO6 A;  2E0X A;  2XVV A;  2YDF A;  4JK4 A;  2VUE A;  2BXA A;  2XSI A;  4ZCG A;  3KJL A;  4HGK A;  1VFI A;  5B5T A;  2I30 A;  1HK3 A;  2OT3 A;  2V36 A;  4K71 A;  1E7F A;  4IW2 A;  4LUF A;  2XVU A;  1H5W A;  5HOZ A;  4C31 B;  4G04 A;  2XMO A;  4LB2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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