4OT2A

Crystal structure of equine serum albumin in complex with naproxen
Total Genus 240
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
240
sequence length
580
structure length
580
Chain Sequence
KSEIAHRFNDLGEKHFKGLVLVAFSQYLQQCPFEDHVKLVNEVTEFAKKCAADESAENCDKSLHTLFGDKLCTVATLRATYGELADCCEKQEPERNECFLTHKDDHPNLPKLKPEPDAQCAAFQEDPDKFLGKYLYEVARRHPYFYGPELLFHAEEYKADFTECCPADDKLACLIPKLDALKERILLSSAKERLKCSSFQNFGERAVKAWSVARLSQKFPKADFAEVSKIVTDLTKVHKECCHGDLLECADDRADLAKYICEHQDSISGKLKACCDKPLLQKSHCIAEVKEDDLPSDLPALAADFAEDKEICKHYKDAKDVFLGTFLYEYSRRHPDYSVSLLLRIAKTYEATLEKCCAEADPPACYRTVFDQFTPLVEEPKSLVKKNCDLFEEVGEYDFQNALIVRYTKKAPQVSTPTLVEIGRTLGKVGSRCCKLPESERLPCSENHLALALNRLCVLHEKTPVSEKITKCCTDSLAERRPCFSALELDEGYVPKEFKAETFTFHADICTLPEDEKQIKKQSALAELVKHKPKATKEQLKTVLGNFSAFVAKCCGREDKEACFAEEGPKLVASSQLALA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structural studies of bovine, equine, and leporine serum albumin complexes with naproxen.
pubmed doi rcsb
molecule keywords Serum albumin
molecule tags Transport protein
total genus 240
structure length 580
sequence length 580
ec nomenclature
pdb deposition date 2014-02-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4ot2A03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4ot2A02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4ot2A04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4ot2A01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4ot2A06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 4ot2A05
2BXPA 4K2CA 4BKEA 2XW0A 5IJFA 3JRYA 1J78A 2BXCA 1GNIA 4OT2A 2BXHA 4G03A 4JK4A 1LOTA 2XW1A 3A73A 1E7CA 3LU8A 3B9LA 1HK1A 1KXPD 2I2ZA 4HGMB 4LUFA 1HK4A 1HK5A 4L9KA 2XVQA 2BXEA 5IFOA 4EMXA 1BJ5A 2BXNA 2BXKA 1HA2A 2BXBA 3JQZA 1E7HA 4LUHA 2XVVA 5IIXA 4L8UA 1HK3A 2BXAA 3TDLA 4G04A 3B9MA 5DQFA 4N0FD 1HK2A 2VUFA 5FUOA 5DBYA 1E7IA 1E7FA 3LU7A 5ID7A 1BM0A 4PO0A 1MA9A 1E7BA 1KW2A 4IW1A 1GNJA 3V09A 4LB9A 2XVWA 2BX8A 2XSIA 4F5VA 4J2VA 2I30A 1O9XA 2VUEA 2BXGA 2BXOA 2BXMA 4F5SA 1N5UA 2YDFA 5IIUA 5IJ5A 3V08A 4ZBQA 2BXQA 5IIHA 4ZBRA 4OR0A 4Z69A 2BXLA 1BKEA 4S1YA 1E7GA 4L9QA 4N0UD 3LU6A 1E7AA 4LB2A 3UIVA 1J7EA 3V03A 1AO6A 5GHKA 2VDBA 4LA0A 5IJEA 4IW2A 4F5UA 4F5TA 2BXFA 2XVUA 1TF0A 1E7EA 4HGKA 4K71A 4E99A 3CX9A 1UORA 5HOZA 2BXDA 3SQJA 2BXIA 1E78A 5ID9A 1H9ZA
chains in the Genus database with same CATH superfamily
2BXPA 4K2CA 3GQXA 3H3AA 4TQ1A 4BKEA 2LXTA 3ECPA 4GDKB 2AGHB 2XW0A 5IJFA 3JRYA 4ZCGA 4DM0A 1J78A 2BXCA 1IJGA 5GIOA 1GNIA 4OT2A 2BXHA 3G9KD 4G03A 2QMCA 4GG2A 4JK4A 1LOTA 1NT2B 3A75A 4MBEC 2XW1A 3A73A 1JNBA 1E7CA 3LU8A 1MUHA 3B9LA 1HK1A 1KXPD 1MIVA 2JUHA 2KWFA 4BY9C 2EFCA 2DYMA 3WHRA 3NMUA 3H37A 3ICXA 3MHSB 3MHHB 2I2ZA 3KJLA 2OZBB 4HGMB 4LUFA 5GIPA 1MM8A 1HK4A 1FOUA 1HK5A 4L9KA 2XVQA 2BXEA 4ZBKA 5IFOA 4EMXA 1BJ5A 2NQOA 2BXNA 4Z9OA 2BXKA 1HA2A 2BXBA 3FWBC 3JQZA 1E7HA 4GDXA 2XVVA 3KIKA 4LUHA 2V36A 3SIVB 5IIXA 4NAWB 3FNMA 4L8UA 1HK3A 2BXAA 2Z8JA 3TDLA 4G04A 3B9MA 1TXUA 5DQFA 4N0FD 3WHQA 4ZUXV 1MIWA 2K0NA 2E0YA 4D7XA 1HK2A 2QHBA 2DG5A 2VUFA 5FUOA 3PLAA 2AJEA 5DBYA 1E7IA 2EFDA 1E7FA 3LU7A 5ID7A 1BM0A 4WA6B 4PO0A 1MA9A 1E7BA 4FIPB 1LNSA 1KW2A 4IW1A 1GNJA 2E0XA 3V09A 3WHSA 2LXSA 4LB9A 2XVWA 2Z8IA 2BX8A 2XSIA 2NNWA 4F5VA 4G01A 3BPJA 4C31B 2DYOA 2DBXA 4J2VA 2I30A 1O9XA 2VUEA 2BXGA 2BXOA 5BPKA 2BXMA 1KDXA 3GQUA 3W1SA 2XMOA 2EFEA 2OT3A 2EFHA 4F5SA 1N5UA 2YDFA 1VZSA 1MUSA 3M99C 5IIUA 4W4UB 2CKXA 5IJ5A 3V08A 4ZBQA 2BXQA 4I9OA 5IIHA 4ZBRA 4M70B 2ROHA 2BXLA 4OR0A 4Z69A 4OTUA 1BKEA 3NVKA 4S1YA 3SIUB 1E7GA 2DBUA 1MIYA 1H5WA 4L9QA 4N0UD 4FJCB 3FWCC 4ZC6A 5B5TA 3LU6A 2Z8KA 1VFIA 1E7AA 4LB2A 3UIVA 1J7EA 4N3ZA 3V03A 2LQIA 5GHKA 2VDBA 4LA0A 2QM6A 4DHXB 5D7GA 1AO6A 5GINA 5IJEA 4GDLB 1E78A 4IW2A 2KBZA 4F5TA 2LQHA 4F5UA 3NVIA 2BXFA 2XVUA 1TF0A 3GA9L 4FK5B 2LOQA 3NVMA 1E7EA 4HGKA 4K71A 3VQIA 4E99A 3CX9A 1UORA 5HOZA 2BXDA 4OTTA 2BXIA 3SQJA 1SB0A 4TQ0A 2DBWA 2GUTA 5ID9A 1H9ZA
chains in the Genus database with same CATH topology
2BXPA 4K2CA 3GQXA 3H3AA 4TQ1A 4BKEA 4GDKB 2XW0A 5IJFA 3JRYA 4ZCGA 1J78A 2BXCA 1IJGA 5GIOA 1GNIA 4OT2A 2BXHA 3G9KD 4G03A 2QMCA 4GG2A 4JK4A 1LOTA 1NT2B 3A75A 4MBEC 2XW1A 3A73A 1JNBA 1E7CA 3LU8A 3B9LA 1HK1A 1KXPD 1MIVA 2JUHA 4BY9C 2EFCA 2DYMA 3WHRA 3NMUA 3H37A 3ICXA 3MHSB 3MHHB 2I2ZA 3KJLA 2OZBB 4HGMB 4LUFA 5GIPA 1HK4A 1FOUA 1HK5A 4L9KA 2XVQA 2BXEA 4ZBKA 5IFOA 4EMXA 1BJ5A 2NQOA 2BXNA 4Z9OA 2BXKA 1HA2A 2BXBA 3FWBC 3JQZA 1E7HA 4GDXA 2XVVA 3KIKA 4LUHA 2V36A 3SIVB 5IIXA 4NAWB 3FNMA 4L8UA 1HK3A 2BXAA 2Z8JA 3TDLA 4G04A 3B9MA 1TXUA 5DQFA 4N0FD 3WHQA 4ZUXV 1MIWA 2E0YA 1HK2A 2QHBA 2DG5A 2VUFA 5FUOA 3PLAA 2AJEA 5DBYA 1E7IA 2EFDA 1E7FA 3LU7A 5ID7A 1BM0A 4WA6B 4PO0A 1MA9A 1E7BA 4FIPB 1LNSA 1KW2A 4IW1A 1GNJA 2E0XA 3V09A 3WHSA 4LB9A 2XVWA 2Z8IA 2BX8A 2XSIA 2NNWA 4F5VA 4G01A 4C31B 2DYOA 2DBXA 4J2VA 2I30A 1O9XA 2VUEA 2BXGA 2BXOA 5BPKA 2BXMA 3GQUA 3W1SA 2XMOA 2EFEA 2OT3A 2EFHA 4F5SA 1N5UA 2YDFA 1VZSA 3M99C 5IIUA 4W4UB 2CKXA 5IJ5A 3V08A 4ZBQA 2BXQA 5IIHA 4ZBRA 4M70B 2ROHA 2BXLA 4OR0A 4Z69A 4OTUA 1BKEA 3NVKA 4S1YA 3SIUB 1E7GA 2DBUA 1MIYA 1H5WA 4L9QA 4N0UD 4FJCB 3FWCC 4ZC6A 5B5TA 3LU6A 2Z8KA 1VFIA 1E7AA 4LB2A 3UIVA 1J7EA 4N3ZA 3V03A 5GHKA 4DHXB 2VDBA 4LA0A 2QM6A 1AO6A 5D7GA 5GINA 5IJEA 4GDLB 1E78A 4IW2A 2KBZA 4F5TA 4F5UA 3NVIA 2BXFA 2XVUA 1TF0A 3GA9L 4FK5B 2LOQA 3NVMA 1E7EA 4HGKA 4K71A 3VQIA 4E99A 3CX9A 1UORA 5HOZA 2BXDA 4OTTA 2BXIA 3SQJA 4TQ0A 2DBWA 5ID9A 1H9ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BXP A;  4K2C A;  4BKE A;  2XW0 A;  5IJF A;  3JRY A;  1J78 A;  2BXC A;  1GNI A;  4OT2 A;  2BXH A;  4G03 A;  4JK4 A;  1LOT A;  2XW1 A;  3A73 A;  1E7C A;  3LU8 A;  3B9L A;  1HK1 A;  1KXP D;  2I2Z A;  4HGM B;  4LUF A;  1HK4 A;  1HK5 A;  4L9K A;  2XVQ A;  2BXE A;  5IFO A;  4EMX A;  1BJ5 A;  2BXN A;  2BXK A;  1HA2 A;  2BXB A;  3JQZ A;  1E7H A;  4LUH A;  2XVV A;  5IIX A;  4L8U A;  1HK3 A;  2BXA A;  3TDL A;  4G04 A;  3B9M A;  5DQF A;  4N0F D;  1HK2 A;  2VUF A;  5FUO A;  5DBY A;  1E7I A;  1E7F A;  3LU7 A;  5ID7 A;  1BM0 A;  4PO0 A;  1MA9 A;  1E7B A;  1KW2 A;  4IW1 A;  1GNJ A;  3V09 A;  4LB9 A;  2XVW A;  2BX8 A;  2XSI A;  4F5V A;  4J2V A;  2I30 A;  1O9X A;  2VUE A;  2BXG A;  2BXO A;  2BXM A;  4F5S A;  1N5U A;  2YDF A;  5IIU A;  5IJ5 A;  3V08 A;  4ZBQ A;  2BXQ A;  5IIH A;  4ZBR A;  4OR0 A;  4Z69 A;  2BXL A;  1BKE A;  4S1Y A;  1E7G A;  4L9Q A;  4N0U D;  3LU6 A;  1E7A A;  4LB2 A;  3UIV A;  1J7E A;  3V03 A;  1AO6 A;  5GHK A;  2VDB A;  4LA0 A;  5IJE A;  4IW2 A;  4F5U A;  4F5T A;  2BXF A;  2XVU A;  1TF0 A;  1E7E A;  4HGK A;  4K71 A;  4E99 A;  3CX9 A;  1UOR A;  5HOZ A;  2BXD A;  3SQJ A;  2BXI A;  1E78 A;  5ID9 A;  1H9Z A; 
#chains in the Genus database with same CATH topology
 2BXP A;  4K2C A;  3GQX A;  3H3A A;  4TQ1 A;  4BKE A;  2LXT A;  3ECP A;  4GDK B;  2AGH B;  2XW0 A;  5IJF A;  3JRY A;  4ZCG A;  4DM0 A;  1J78 A;  2BXC A;  1IJG A;  5GIO A;  1GNI A;  4OT2 A;  2BXH A;  3G9K D;  4G03 A;  2QMC A;  4GG2 A;  4JK4 A;  1LOT A;  1NT2 B;  3A75 A;  4MBE C;  2XW1 A;  3A73 A;  1JNB A;  1E7C A;  3LU8 A;  1MUH A;  3B9L A;  1HK1 A;  1KXP D;  1MIV A;  2JUH A;  2KWF A;  4BY9 C;  2EFC A;  2DYM A;  3WHR A;  3NMU A;  3H37 A;  3ICX A;  3MHS B;  3MHH B;  2I2Z A;  3KJL A;  2OZB B;  4HGM B;  4LUF A;  5GIP A;  1MM8 A;  1HK4 A;  1FOU A;  1HK5 A;  4L9K A;  2XVQ A;  2BXE A;  4ZBK A;  5IFO A;  4EMX A;  1BJ5 A;  2NQO A;  2BXN A;  4Z9O A;  2BXK A;  1HA2 A;  2BXB A;  3FWB C;  3JQZ A;  1E7H A;  4GDX A;  2XVV A;  3KIK A;  4LUH A;  2V36 A;  3SIV B;  5IIX A;  4NAW B;  3FNM A;  4L8U A;  1HK3 A;  2BXA A;  2Z8J A;  3TDL A;  4G04 A;  3B9M A;  1TXU A;  5DQF A;  4N0F D;  3WHQ A;  4ZUX V;  1MIW A;  2K0N A;  2E0Y A;  4D7X A;  1HK2 A;  2QHB A;  2DG5 A;  2VUF A;  5FUO A;  3PLA A;  2AJE A;  5DBY A;  1E7I A;  2EFD A;  1E7F A;  3LU7 A;  5ID7 A;  1BM0 A;  4WA6 B;  4PO0 A;  1MA9 A;  1E7B A;  4FIP B;  1LNS A;  1KW2 A;  4IW1 A;  1GNJ A;  2E0X A;  3V09 A;  3WHS A;  2LXS A;  4LB9 A;  2XVW A;  2Z8I A;  2BX8 A;  2XSI A;  2NNW A;  4F5V A;  4G01 A;  3BPJ A;  4C31 B;  2DYO A;  2DBX A;  4J2V A;  2I30 A;  1O9X A;  2VUE A;  2BXG A;  2BXO A;  5BPK A;  2BXM A;  1KDX A;  3GQU A;  3W1S A;  2XMO A;  2EFE A;  2OT3 A;  2EFH A;  4F5S A;  1N5U A;  2YDF A;  1VZS A;  1MUS A;  3M99 C;  5IIU A;  4W4U B;  2CKX A;  5IJ5 A;  3V08 A;  4ZBQ A;  2BXQ A;  4I9O A;  5IIH A;  4ZBR A;  4M70 B;  2ROH A;  2BXL A;  4OR0 A;  4Z69 A;  4OTU A;  1BKE A;  3NVK A;  4S1Y A;  3SIU B;  1E7G A;  2DBU A;  1MIY A;  1H5W A;  4L9Q A;  4N0U D;  4FJC B;  3FWC C;  4ZC6 A;  5B5T A;  3LU6 A;  2Z8K A;  1VFI A;  1E7A A;  4LB2 A;  3UIV A;  1J7E A;  4N3Z A;  3V03 A;  2LQI A;  5GHK A;  2VDB A;  4LA0 A;  2QM6 A;  4DHX B;  5D7G A;  1AO6 A;  5GIN A;  5IJE A;  4GDL B;  1E78 A;  4IW2 A;  2KBZ A;  4F5T A;  2LQH A;  4F5U A;  3NVI A;  2BXF A;  2XVU A;  1TF0 A;  3GA9 L;  4FK5 B;  2LOQ A;  3NVM A;  1E7E A;  4HGK A;  4K71 A;  3VQI A;  4E99 A;  3CX9 A;  1UOR A;  5HOZ A;  2BXD A;  4OTT A;  2BXI A;  3SQJ A;  1SB0 A;  4TQ0 A;  2DBW A;  2GUT A;  5ID9 A;  1H9Z A; 
#chains in the Genus database with same CATH homology
 2BXP A;  4K2C A;  3GQX A;  3H3A A;  4TQ1 A;  4BKE A;  4GDK B;  2XW0 A;  5IJF A;  3JRY A;  4ZCG A;  1J78 A;  2BXC A;  1IJG A;  5GIO A;  1GNI A;  4OT2 A;  2BXH A;  3G9K D;  4G03 A;  2QMC A;  4GG2 A;  4JK4 A;  1LOT A;  1NT2 B;  3A75 A;  4MBE C;  2XW1 A;  3A73 A;  1JNB A;  1E7C A;  3LU8 A;  3B9L A;  1HK1 A;  1KXP D;  1MIV A;  2JUH A;  4BY9 C;  2EFC A;  2DYM A;  3WHR A;  3NMU A;  3H37 A;  3ICX A;  3MHS B;  3MHH B;  2I2Z A;  3KJL A;  2OZB B;  4HGM B;  4LUF A;  5GIP A;  1HK4 A;  1FOU A;  1HK5 A;  4L9K A;  2XVQ A;  2BXE A;  4ZBK A;  5IFO A;  4EMX A;  1BJ5 A;  2NQO A;  2BXN A;  4Z9O A;  2BXK A;  1HA2 A;  2BXB A;  3FWB C;  3JQZ A;  1E7H A;  4GDX A;  2XVV A;  3KIK A;  4LUH A;  2V36 A;  3SIV B;  5IIX A;  4NAW B;  3FNM A;  4L8U A;  1HK3 A;  2BXA A;  2Z8J A;  3TDL A;  4G04 A;  3B9M A;  1TXU A;  5DQF A;  4N0F D;  3WHQ A;  4ZUX V;  1MIW A;  2E0Y A;  1HK2 A;  2QHB A;  2DG5 A;  2VUF A;  5FUO A;  3PLA A;  2AJE A;  5DBY A;  1E7I A;  2EFD A;  1E7F A;  3LU7 A;  5ID7 A;  1BM0 A;  4WA6 B;  4PO0 A;  1MA9 A;  1E7B A;  4FIP B;  1LNS A;  1KW2 A;  4IW1 A;  1GNJ A;  2E0X A;  3V09 A;  3WHS A;  4LB9 A;  2XVW A;  2Z8I A;  2BX8 A;  2XSI A;  2NNW A;  4F5V A;  4G01 A;  4C31 B;  2DYO A;  2DBX A;  4J2V A;  2I30 A;  1O9X A;  2VUE A;  2BXG A;  2BXO A;  5BPK A;  2BXM A;  3GQU A;  3W1S A;  2XMO A;  2EFE A;  2OT3 A;  2EFH A;  4F5S A;  1N5U A;  2YDF A;  1VZS A;  3M99 C;  5IIU A;  4W4U B;  2CKX A;  5IJ5 A;  3V08 A;  4ZBQ A;  2BXQ A;  5IIH A;  4ZBR A;  4M70 B;  2ROH A;  2BXL A;  4OR0 A;  4Z69 A;  4OTU A;  1BKE A;  3NVK A;  4S1Y A;  3SIU B;  1E7G A;  2DBU A;  1MIY A;  1H5W A;  4L9Q A;  4N0U D;  4FJC B;  3FWC C;  4ZC6 A;  5B5T A;  3LU6 A;  2Z8K A;  1VFI A;  1E7A A;  4LB2 A;  3UIV A;  1J7E A;  4N3Z A;  3V03 A;  5GHK A;  4DHX B;  2VDB A;  4LA0 A;  2QM6 A;  1AO6 A;  5D7G A;  5GIN A;  5IJE A;  4GDL B;  1E78 A;  4IW2 A;  2KBZ A;  4F5T A;  4F5U A;  3NVI A;  2BXF A;  2XVU A;  1TF0 A;  3GA9 L;  4FK5 B;  2LOQ A;  3NVM A;  1E7E A;  4HGK A;  4K71 A;  3VQI A;  4E99 A;  3CX9 A;  1UOR A;  5HOZ A;  2BXD A;  4OTT A;  2BXI A;  3SQJ A;  4TQ0 A;  2DBW A;  5ID9 A;  1H9Z A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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