1EW9A

Alkaline phosphatase (e.c. 3.1.3.1) complex with mercaptomethyl phosphonate
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
Knots found
sequence length
449
structure length
449
Chain Sequence
TPEMPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Escherichia coli
publication title Alternate modes of binding in two crystal structures of alkaline phosphatase-inhibitor complexes.
pubmed rcsb
molecule keywords ALKALINE PHOSPHATASE
total genus 159
structure length 449
sequence length 449
chains with identical sequence B
other databases KnotProt 2.0: S +31
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 2000-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 1ew9A00
5DLTA 3M7VA 4UOPA 5LQQA 1N2KA 1E33P 1AJAA 4ZGAA 5EGHA 4CXUA 2RH6A 3DPCA 4LR8A 1E1ZP 4MY4A 1KHJA 3UN2A 4GTWA 1HQAA 2XRGA 4ZG9A 2GSNA 2VQRA 4LR7A 1HJKA 3LXQA 1EW9A 3B5QA 5L0EA 1ELXA 3MK2A 1HDHA 4LRDA 2QZUA 4N7TA 4CXSA 3A52A 2W5RA 4LRFA 1AJBA 1ELZA 3BDHA 3IGZB 3NKRA 1E3CP 4NWXA 3WBHA 1EJJA 3M8WA 4CYRA 4FDJA 4UPIA 4GTXA 5GRRA 4TN0A 4LR9A 5LRMA 4LRCA 5IJQA 1ELYA 3UNYA 3TX0A 1ED9A 4ZG6A 4UPLA 4YR1A 2ZKTA 1URAA 1B8JA 3UN3A 1KHNA 5K4PA 3UO0A 3WAYA 1EQJA 2W5QA 5LIAA 5C66A 4LREA 4MIVA 3T02A 1ZEBA 1EI6A 1KH7A 3TWZA 2D1GA 1SHQA 1URBA 5DLVA 5KXAA 4UPKA 4CXKA 2W8SA 3E2DA 3IDDA 3MK1A 1ALIA 5EGEA 3T01A 3CMRA 3NKNA 2W8DA 1ALHA 3BDGA 4GTYA 3T00A 1ANIA 1ZEDA 3BDGB 3BDFA 2GSUA 1P49A 3NVLA 2W5WA 1SHNA 5DLWA 3MK0A 4LRAA 4ZG7A 5TJ3A 3M8ZA 4B56A 1O98A 2W5TA 4FDIA 4NWJA 2GLQA 3OT9A 3WAXA 1KH9A 1KHLA 1E2SP 1K7HA 4KJGA 2W5XA 2X98A 4KM4A 3KD8A 3UN5A 4KAYA 1EW2A 1KH4A 5HRTA 5IJSA 5AJ9A 4LRBA 2GSOA 4UORA 3ED4A 4QAXA 5L0KA 1AUKA 3SZZA 1KHKA 5INHA 3IGYB 4CYSA 2ANHA 1EW8A 3WAVA 1ANJA 2W5SA 3NKPA 3NKQA 2XR9A 4MHXA 1Y7AA 2IUCA 4KJDA 2IUCB 3NKOA 4LQYA 3SZYA 4UOOA 1Y6VA 4GTZA 4LR2A 1ED8A 1ALJA 2GA3A 1AJCA 1O99A 1FSUA 3DYCA 5LRNA 3WAWA 2IFYA 1KH5A 1ALKA 2G9YA 4UPHA 3NKMA 3M8YA 3TG0A 1ZEFA 3Q3QA 4KAVA 5L0BA 1AJDA 1N2LA 5GOVA 2W5VA
chains in the Genus database with same CATH superfamily
5DLTA 3M7VA 4UOPA 5LQQA 1N2KA 1E33P 1AJAA 4ZGAA 5EGHA 4CXUA 2RH6A 3DPCA 4LR8A 1E1ZP 4MY4A 1KHJA 3UN2A 4GTWA 1HQAA 2XRGA 4ZG9A 2GSNA 2VQRA 4LR7A 1HJKA 3LXQA 1EW9A 3B5QA 5L0EA 1ELXA 3MK2A 1HDHA 4LRDA 2QZUA 4N7TA 4CXSA 3A52A 2W5RA 4LRFA 1AJBA 1ELZA 3BDHA 3IGZB 3NKRA 1E3CP 4NWXA 3WBHA 1EJJA 3M8WA 4CYRA 4FDJA 4UPIA 4GTXA 5GRRA 4TN0A 4LR9A 5LRMA 4LRCA 5IJQA 1ELYA 3UNYA 3TX0A 1ED9A 4ZG6A 4UPLA 4YR1A 2ZKTA 1URAA 1B8JA 3UN3A 1KHNA 5K4PA 3UO0A 3WAYA 1EQJA 2W5QA 5LIAA 5C66A 4LREA 4MIVA 3T02A 1ZEBA 1EI6A 1KH7A 3TWZA 2D1GA 1SHQA 1URBA 5DLVA 5KXAA 4UPKA 4CXKA 2W8SA 3E2DA 3IDDA 3MK1A 1ALIA 5EGEA 3T01A 3CMRA 3NKNA 2W8DA 1ALHA 3BDGA 4GTYA 3T00A 1ANIA 1ZEDA 3BDGB 3BDFA 2GSUA 1P49A 3NVLA 2W5WA 1SHNA 5DLWA 3MK0A 4LRAA 4ZG7A 5TJ3A 3M8ZA 4B56A 1O98A 2W5TA 4FDIA 4NWJA 2GLQA 3OT9A 3WAXA 1KH9A 1KHLA 1E2SP 1K7HA 4KJGA 2W5XA 2X98A 4KM4A 3KD8A 3UN5A 4KAYA 1EW2A 1KH4A 5HRTA 5IJSA 5AJ9A 4LRBA 2GSOA 4UORA 3ED4A 4QAXA 5L0KA 1AUKA 3SZZA 1KHKA 5INHA 3IGYB 4CYSA 2ANHA 1EW8A 3WAVA 1ANJA 2W5SA 3NKPA 3NKQA 2XR9A 4MHXA 1Y7AA 2IUCA 4KJDA 2IUCB 3NKOA 4LQYA 3SZYA 4UOOA 1Y6VA 4GTZA 4LR2A 1ED8A 1ALJA 2GA3A 1AJCA 1O99A 1FSUA 3DYCA 5LRNA 3WAWA 2IFYA 1KH5A 1ALKA 2G9YA 4UPHA 3NKMA 3M8YA 3TG0A 1ZEFA 3Q3QA 4KAVA 5L0BA 1AJDA 1N2LA 5GOVA 2W5VA
chains in the Genus database with same CATH topology
5DLTA 3M7VA 4UOPA 5LQQA 1N2KA 1E33P 1AJAA 4ZGAA 5EGHA 4CXUA 2RH6A 3DPCA 4LR8A 1E1ZP 4MY4A 1KHJA 3UN2A 4GTWA 1HQAA 2XRGA 4ZG9A 2GSNA 2VQRA 4LR7A 1HJKA 3LXQA 1EW9A 3B5QA 5L0EA 1ELXA 3MK2A 1HDHA 4LRDA 2QZUA 4N7TA 4CXSA 3A52A 2W5RA 4LRFA 1AJBA 1ELZA 3BDHA 3IGZB 3NKRA 1E3CP 4NWXA 3WBHA 1EJJA 3M8WA 4CYRA 4FDJA 4UPIA 4GTXA 5GRRA 4TN0A 4LR9A 5LRMA 4LRCA 5IJQA 1ELYA 3UNYA 3TX0A 1ED9A 4ZG6A 4UPLA 4YR1A 2ZKTA 1URAA 1B8JA 3UN3A 1KHNA 5K4PA 3UO0A 3WAYA 1EQJA 2W5QA 5LIAA 5C66A 4LREA 4MIVA 3T02A 1ZEBA 1EI6A 1KH7A 3TWZA 2D1GA 1SHQA 1URBA 5DLVA 5KXAA 4UPKA 4CXKA 2W8SA 3E2DA 3IDDA 3MK1A 1ALIA 5EGEA 3T01A 3CMRA 3NKNA 2W8DA 1ALHA 3BDGA 4GTYA 3T00A 1ANIA 1ZEDA 3BDGB 3BDFA 2GSUA 1P49A 3NVLA 2W5WA 1SHNA 5DLWA 3MK0A 4LRAA 4ZG7A 5TJ3A 3M8ZA 4B56A 1O98A 2W5TA 4FDIA 4NWJA 2GLQA 3OT9A 3WAXA 1KH9A 1KHLA 1E2SP 1K7HA 4KJGA 2W5XA 2X98A 4KM4A 3KD8A 3UN5A 4KAYA 1EW2A 1KH4A 5HRTA 5IJSA 5AJ9A 4LRBA 2GSOA 4UORA 3ED4A 4QAXA 5L0KA 1AUKA 3SZZA 1KHKA 5INHA 3IGYB 4CYSA 2ANHA 1EW8A 3WAVA 1ANJA 2W5SA 3NKPA 3NKQA 2XR9A 4MHXA 1Y7AA 2IUCA 4KJDA 2IUCB 3NKOA 4LQYA 3SZYA 4UOOA 1Y6VA 4GTZA 4LR2A 1ED8A 1ALJA 2GA3A 1AJCA 1O99A 1FSUA 3DYCA 5LRNA 3WAWA 2IFYA 1KH5A 1ALKA 2G9YA 4UPHA 3NKMA 3M8YA 3TG0A 1ZEFA 3Q3QA 4KAVA 5L0BA 1AJDA 1N2LA 5GOVA 2W5VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5DLT A;  3M7V A;  4UOP A;  5LQQ A;  1N2K A;  1E33 P;  1AJA A;  4ZGA A;  5EGH A;  4CXU A;  2RH6 A;  3DPC A;  4LR8 A;  1E1Z P;  4MY4 A;  1KHJ A;  3UN2 A;  4GTW A;  1HQA A;  2XRG A;  4ZG9 A;  2GSN A;  2VQR A;  4LR7 A;  1HJK A;  3LXQ A;  1EW9 A;  3B5Q A;  5L0E A;  1ELX A;  3MK2 A;  1HDH A;  4LRD A;  2QZU A;  4N7T A;  4CXS A;  3A52 A;  2W5R A;  4LRF A;  1AJB A;  1ELZ A;  3BDH A;  3IGZ B;  3NKR A;  1E3C P;  4NWX A;  3WBH A;  1EJJ A;  3M8W A;  4CYR A;  4FDJ A;  4UPI A;  4GTX A;  5GRR A;  4TN0 A;  4LR9 A;  5LRM A;  4LRC A;  5IJQ A;  1ELY A;  3UNY A;  3TX0 A;  1ED9 A;  4ZG6 A;  4UPL A;  4YR1 A;  2ZKT A;  1URA A;  1B8J A;  3UN3 A;  1KHN A;  5K4P A;  3UO0 A;  3WAY A;  1EQJ A;  2W5Q A;  5LIA A;  5C66 A;  4LRE A;  4MIV A;  3T02 A;  1ZEB A;  1EI6 A;  1KH7 A;  3TWZ A;  2D1G A;  1SHQ A;  1URB A;  5DLV A;  5KXA A;  4UPK A;  4CXK A;  2W8S A;  3E2D A;  3IDD A;  3MK1 A;  1ALI A;  5EGE A;  3T01 A;  3CMR A;  3NKN A;  2W8D A;  1ALH A;  3BDG A;  4GTY A;  3T00 A;  1ANI A;  1ZED A;  3BDG B;  3BDF A;  2GSU A;  1P49 A;  3NVL A;  2W5W A;  1SHN A;  5DLW A;  3MK0 A;  4LRA A;  4ZG7 A;  5TJ3 A;  3M8Z A;  4B56 A;  1O98 A;  2W5T A;  4FDI A;  4NWJ A;  2GLQ A;  3OT9 A;  3WAX A;  1KH9 A;  1KHL A;  1E2S P;  1K7H A;  4KJG A;  2W5X A;  2X98 A;  4KM4 A;  3KD8 A;  3UN5 A;  4KAY A;  1EW2 A;  1KH4 A;  5HRT A;  5IJS A;  5AJ9 A;  4LRB A;  2GSO A;  4UOR A;  3ED4 A;  4QAX A;  5L0K A;  1AUK A;  3SZZ A;  1KHK A;  5INH A;  3IGY B;  4CYS A;  2ANH A;  1EW8 A;  3WAV A;  1ANJ A;  2W5S A;  3NKP A;  3NKQ A;  2XR9 A;  4MHX A;  1Y7A A;  2IUC A;  4KJD A;  2IUC B;  3NKO A;  4LQY A;  3SZY A;  4UOO A;  1Y6V A;  4GTZ A;  4LR2 A;  1ED8 A;  1ALJ A;  2GA3 A;  1AJC A;  1O99 A;  1FSU A;  3DYC A;  5LRN A;  3WAW A;  2IFY A;  1KH5 A;  1ALK A;  2G9Y A;  4UPH A;  3NKM A;  3M8Y A;  3TG0 A;  1ZEF A;  3Q3Q A;  4KAV A;  5L0B A;  1AJD A;  1N2L A;  5GOV A;  2W5V A; 
#chains in the Genus database with same CATH topology
 5DLT A;  3M7V A;  4UOP A;  5LQQ A;  1N2K A;  1E33 P;  1AJA A;  4ZGA A;  5EGH A;  4CXU A;  2RH6 A;  3DPC A;  4LR8 A;  1E1Z P;  4MY4 A;  1KHJ A;  3UN2 A;  4GTW A;  1HQA A;  2XRG A;  4ZG9 A;  2GSN A;  2VQR A;  4LR7 A;  1HJK A;  3LXQ A;  1EW9 A;  3B5Q A;  5L0E A;  1ELX A;  3MK2 A;  1HDH A;  4LRD A;  2QZU A;  4N7T A;  4CXS A;  3A52 A;  2W5R A;  4LRF A;  1AJB A;  1ELZ A;  3BDH A;  3IGZ B;  3NKR A;  1E3C P;  4NWX A;  3WBH A;  1EJJ A;  3M8W A;  4CYR A;  4FDJ A;  4UPI A;  4GTX A;  5GRR A;  4TN0 A;  4LR9 A;  5LRM A;  4LRC A;  5IJQ A;  1ELY A;  3UNY A;  3TX0 A;  1ED9 A;  4ZG6 A;  4UPL A;  4YR1 A;  2ZKT A;  1URA A;  1B8J A;  3UN3 A;  1KHN A;  5K4P A;  3UO0 A;  3WAY A;  1EQJ A;  2W5Q A;  5LIA A;  5C66 A;  4LRE A;  4MIV A;  3T02 A;  1ZEB A;  1EI6 A;  1KH7 A;  3TWZ A;  2D1G A;  1SHQ A;  1URB A;  5DLV A;  5KXA A;  4UPK A;  4CXK A;  2W8S A;  3E2D A;  3IDD A;  3MK1 A;  1ALI A;  5EGE A;  3T01 A;  3CMR A;  3NKN A;  2W8D A;  1ALH A;  3BDG A;  4GTY A;  3T00 A;  1ANI A;  1ZED A;  3BDG B;  3BDF A;  2GSU A;  1P49 A;  3NVL A;  2W5W A;  1SHN A;  5DLW A;  3MK0 A;  4LRA A;  4ZG7 A;  5TJ3 A;  3M8Z A;  4B56 A;  1O98 A;  2W5T A;  4FDI A;  4NWJ A;  2GLQ A;  3OT9 A;  3WAX A;  1KH9 A;  1KHL A;  1E2S P;  1K7H A;  4KJG A;  2W5X A;  2X98 A;  4KM4 A;  3KD8 A;  3UN5 A;  4KAY A;  1EW2 A;  1KH4 A;  5HRT A;  5IJS A;  5AJ9 A;  4LRB A;  2GSO A;  4UOR A;  3ED4 A;  4QAX A;  5L0K A;  1AUK A;  3SZZ A;  1KHK A;  5INH A;  3IGY B;  4CYS A;  2ANH A;  1EW8 A;  3WAV A;  1ANJ A;  2W5S A;  3NKP A;  3NKQ A;  2XR9 A;  4MHX A;  1Y7A A;  2IUC A;  4KJD A;  2IUC B;  3NKO A;  4LQY A;  3SZY A;  4UOO A;  1Y6V A;  4GTZ A;  4LR2 A;  1ED8 A;  1ALJ A;  2GA3 A;  1AJC A;  1O99 A;  1FSU A;  3DYC A;  5LRN A;  3WAW A;  2IFY A;  1KH5 A;  1ALK A;  2G9Y A;  4UPH A;  3NKM A;  3M8Y A;  3TG0 A;  1ZEF A;  3Q3Q A;  4KAV A;  5L0B A;  1AJD A;  1N2L A;  5GOV A;  2W5V A; 
#chains in the Genus database with same CATH homology
 5DLT A;  3M7V A;  4UOP A;  5LQQ A;  1N2K A;  1E33 P;  1AJA A;  4ZGA A;  5EGH A;  4CXU A;  2RH6 A;  3DPC A;  4LR8 A;  1E1Z P;  4MY4 A;  1KHJ A;  3UN2 A;  4GTW A;  1HQA A;  2XRG A;  4ZG9 A;  2GSN A;  2VQR A;  4LR7 A;  1HJK A;  3LXQ A;  1EW9 A;  3B5Q A;  5L0E A;  1ELX A;  3MK2 A;  1HDH A;  4LRD A;  2QZU A;  4N7T A;  4CXS A;  3A52 A;  2W5R A;  4LRF A;  1AJB A;  1ELZ A;  3BDH A;  3IGZ B;  3NKR A;  1E3C P;  4NWX A;  3WBH A;  1EJJ A;  3M8W A;  4CYR A;  4FDJ A;  4UPI A;  4GTX A;  5GRR A;  4TN0 A;  4LR9 A;  5LRM A;  4LRC A;  5IJQ A;  1ELY A;  3UNY A;  3TX0 A;  1ED9 A;  4ZG6 A;  4UPL A;  4YR1 A;  2ZKT A;  1URA A;  1B8J A;  3UN3 A;  1KHN A;  5K4P A;  3UO0 A;  3WAY A;  1EQJ A;  2W5Q A;  5LIA A;  5C66 A;  4LRE A;  4MIV A;  3T02 A;  1ZEB A;  1EI6 A;  1KH7 A;  3TWZ A;  2D1G A;  1SHQ A;  1URB A;  5DLV A;  5KXA A;  4UPK A;  4CXK A;  2W8S A;  3E2D A;  3IDD A;  3MK1 A;  1ALI A;  5EGE A;  3T01 A;  3CMR A;  3NKN A;  2W8D A;  1ALH A;  3BDG A;  4GTY A;  3T00 A;  1ANI A;  1ZED A;  3BDG B;  3BDF A;  2GSU A;  1P49 A;  3NVL A;  2W5W A;  1SHN A;  5DLW A;  3MK0 A;  4LRA A;  4ZG7 A;  5TJ3 A;  3M8Z A;  4B56 A;  1O98 A;  2W5T A;  4FDI A;  4NWJ A;  2GLQ A;  3OT9 A;  3WAX A;  1KH9 A;  1KHL A;  1E2S P;  1K7H A;  4KJG A;  2W5X A;  2X98 A;  4KM4 A;  3KD8 A;  3UN5 A;  4KAY A;  1EW2 A;  1KH4 A;  5HRT A;  5IJS A;  5AJ9 A;  4LRB A;  2GSO A;  4UOR A;  3ED4 A;  4QAX A;  5L0K A;  1AUK A;  3SZZ A;  1KHK A;  5INH A;  3IGY B;  4CYS A;  2ANH A;  1EW8 A;  3WAV A;  1ANJ A;  2W5S A;  3NKP A;  3NKQ A;  2XR9 A;  4MHX A;  1Y7A A;  2IUC A;  4KJD A;  2IUC B;  3NKO A;  4LQY A;  3SZY A;  4UOO A;  1Y6V A;  4GTZ A;  4LR2 A;  1ED8 A;  1ALJ A;  2GA3 A;  1AJC A;  1O99 A;  1FSU A;  3DYC A;  5LRN A;  3WAW A;  2IFY A;  1KH5 A;  1ALK A;  2G9Y A;  4UPH A;  3NKM A;  3M8Y A;  3TG0 A;  1ZEF A;  3Q3Q A;  4KAV A;  5L0B A;  1AJD A;  1N2L A;  5GOV A;  2W5V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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