2W8DA

Distinct and essential morphogenic functions for wall- and lipo- teichoic acids in bacillus subtilis
Total Genus 141
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
Knots found
sequence length
420
structure length
419
Chain Sequence
b'DSSDVTEVENYMKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDNETFYFDNFFHQTGQGKSDAEFMMENSLYPLAQGSVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYDMNEENTKNYGMKDKPFFKESMPLLESLPQPFYTKFITLSNHFPFGMDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISENHNKAMAKVLGKDEITDYDNAQLQRVPLFIHAAGVKGEKVHKYAGDVDVAPTILHLLGVDTKDYLMSGSDILSKEHREVIPFRNGDFISPKYTKISGKYYDTKTGKELDESEVDKSEDSLVKKELEMSDKIINGDLLRFYEPKGFKKVNPSDYDYTKH'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID SYNTHASE 2
publication title Distinct and Essential Morphogenic Functions for Wall- and Lipo-Teichoic Acids in Bacillus Subtilis
pubmed doi rcsb
source organism Bacillus subtilis
molecule tags Transferase
total genus 141
structure length 419
sequence length 420
chains with identical sequence B
other databases KnotProt 2.0: S +31
ec nomenclature ec 2.7.8.-:
pdb deposition date 2009-01-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00884 Sulfatase Sulfatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 2w8dA02
5AJ9A 1HJKA 4GTYA 3T02A 3UN3A 2G9YA 3WAXA 3SZZA 3NKMA 4LRBA 4LRDA 2IFYA 1ALKA 3LXQA 3DPCA 4QAXA 3M8YA 2W5WA 2X98A 3Q3QA 3TX0A 3CMRA 1EJJA 2XR9A 5L0KA 1Y7AA 1KHJA 3UNYA 4YR1A 4LR8A 3DYCA 3KD8A 5L0BA 3WAWA 4CXKA 5EGHA 4LQYA 4LR9A 2VQRA 3BDGB 3MK2A 2IUCA 2IUCB 1FSUA 2GSUA 1ALJA 3T01A 4UOOA 2QZUA 3UO0A 3BDHA 3WAVA 5DLVA 4CXUA 1EW2A 4GTXA 4CYSA 1ELXA 3BDFA 3WBHA 4UPIA 5GRRA 2W5QA 4ZG6A 1AJAA 5C66A 4FDIA 5LQQA 5LIAA 5DLWA 5LRMA 1KHLA 1E1ZP 2D1GA 5KXAA 1HQAA 1ANJA 3MK0A 1AJCA 4TN0A 1KH9A 5DLTA 4UPLA 1ANIA 5K4PA 2W5XA 1O98A 4N7TA 3NVLA 4CXSA 1N2LA 1ZEDA 2W5RA 2W8DA 4LR2A 2W5TA 1E3CP 5TJ3A 3WAYA 4FDJA 2ZKTA 1ALIA 4NWJA 5LRNA 3NKQA 2W8SA 1EI6A 4ZG9A 4MHXA 1B8JA 4LRAA 2GSNA 4KJDA 5L0EA 3A52A 4KAVA 5GOVA 4LRCA 1ALHA 1AUKA 3IDDA 5INHA 1EW9A 1URBA 2XRGA 3NKOA 3OT9A 1ED8A 1ELZA 1AJBA 3MK1A 2RH6A 1HDHA 2W5VA 4B56A 4UORA 4MIVA 4GTWA 1ZEBA 3IGZB 3NKPA 5EGEA 4KAYA 2GA3A 1EW8A 1P49A 1SHNA 1Y6VA 3NKNA 1KH7A 1ELYA 4MY4A 4ZG7A 1EQJA 1K7HA 3NKRA 3TWZA 3TG0A 5HRTA 3UN5A 3M8WA 3UN2A 4ZGAA 1KH5A 4LRFA 1KHKA 4NWXA 1KHNA 4CYRA 1N2KA 4LR7A 3M7VA 4KM4A 4UPKA 3E2DA 3ED4A 1E2SP 3B5QA 4KJGA 4UPHA 1O99A 1AJDA 1URAA 3SZYA 2GLQA 1SHQA 2W5SA 4GTZA 5IJSA 3BDGA 1ZEFA 1KH4A 2GSOA 4UOPA 1E33P 2ANHA 3IGYB 4LREA 1ED9A 5IJQA 3M8ZA 3T00A
chains in the Genus database with same CATH superfamily
5AJ9A 1HJKA 4GTYA 3T02A 3UN3A 2G9YA 3WAXA 3SZZA 3NKMA 4LRBA 4LRDA 2IFYA 1ALKA 3LXQA 3DPCA 4QAXA 3M8YA 2W5WA 2X98A 3Q3QA 3TX0A 3CMRA 1EJJA 2XR9A 5L0KA 1Y7AA 1KHJA 3UNYA 4YR1A 4LR8A 3DYCA 3KD8A 5L0BA 3WAWA 4CXKA 5EGHA 4LQYA 4LR9A 2VQRA 3BDGB 3MK2A 2IUCA 2IUCB 1FSUA 2GSUA 1ALJA 3T01A 4UOOA 2QZUA 3UO0A 3BDHA 3WAVA 5DLVA 4CXUA 1EW2A 4GTXA 4CYSA 1ELXA 3BDFA 3WBHA 4UPIA 5GRRA 2W5QA 4ZG6A 1AJAA 5C66A 4FDIA 5LQQA 5LIAA 5DLWA 5LRMA 1KHLA 1E1ZP 2D1GA 5KXAA 1HQAA 1ANJA 3MK0A 1AJCA 4TN0A 1KH9A 5DLTA 4UPLA 1ANIA 5K4PA 2W5XA 1O98A 4N7TA 3NVLA 4CXSA 1N2LA 1ZEDA 2W5RA 2W8DA 4LR2A 2W5TA 1E3CP 5TJ3A 3WAYA 4FDJA 2ZKTA 1ALIA 4NWJA 5LRNA 3NKQA 2W8SA 1EI6A 4ZG9A 4MHXA 1B8JA 4LRAA 2GSNA 4KJDA 5L0EA 3A52A 4KAVA 5GOVA 4LRCA 1ALHA 1AUKA 3IDDA 5INHA 1EW9A 1URBA 2XRGA 3NKOA 3OT9A 1ED8A 1ELZA 1AJBA 3MK1A 2RH6A 1HDHA 2W5VA 4B56A 4UORA 4MIVA 4GTWA 1ZEBA 3IGZB 3NKPA 5EGEA 4KAYA 2GA3A 1EW8A 1P49A 1SHNA 1Y6VA 3NKNA 1KH7A 1ELYA 4MY4A 4ZG7A 1EQJA 1K7HA 3NKRA 3TWZA 3TG0A 5HRTA 3UN5A 3M8WA 3UN2A 4ZGAA 1KH5A 4LRFA 1KHKA 4NWXA 1KHNA 4CYRA 1N2KA 4LR7A 3M7VA 4KM4A 4UPKA 3E2DA 3ED4A 1E2SP 3B5QA 4KJGA 4UPHA 1O99A 1AJDA 1URAA 3SZYA 2GLQA 1SHQA 2W5SA 4GTZA 5IJSA 3BDGA 1ZEFA 1KH4A 2GSOA 4UOPA 1E33P 2ANHA 3IGYB 4LREA 1ED9A 5IJQA 3M8ZA 3T00A
chains in the Genus database with same CATH topology
5AJ9A 1HJKA 4GTYA 3T02A 3UN3A 2G9YA 3WAXA 3SZZA 3NKMA 4LRBA 4LRDA 2IFYA 1ALKA 3LXQA 3DPCA 4QAXA 3M8YA 2W5WA 2X98A 3Q3QA 3TX0A 3CMRA 1EJJA 2XR9A 5L0KA 1Y7AA 1KHJA 3UNYA 4YR1A 4LR8A 3DYCA 3KD8A 5L0BA 3WAWA 4CXKA 5EGHA 4LQYA 4LR9A 2VQRA 3BDGB 3MK2A 2IUCA 2IUCB 1FSUA 2GSUA 1ALJA 3T01A 4UOOA 2QZUA 3UO0A 3BDHA 3WAVA 5DLVA 4CXUA 1EW2A 4GTXA 4CYSA 1ELXA 3BDFA 3WBHA 4UPIA 5GRRA 2W5QA 4ZG6A 1AJAA 5C66A 4FDIA 5LQQA 5LIAA 5DLWA 5LRMA 1KHLA 1E1ZP 2D1GA 5KXAA 1HQAA 1ANJA 3MK0A 1AJCA 4TN0A 1KH9A 5DLTA 4UPLA 1ANIA 5K4PA 2W5XA 1O98A 4N7TA 3NVLA 4CXSA 1N2LA 1ZEDA 2W5RA 2W8DA 4LR2A 2W5TA 1E3CP 5TJ3A 3WAYA 4FDJA 2ZKTA 1ALIA 4NWJA 5LRNA 3NKQA 2W8SA 1EI6A 4ZG9A 4MHXA 1B8JA 4LRAA 2GSNA 4KJDA 5L0EA 3A52A 4KAVA 5GOVA 4LRCA 1ALHA 1AUKA 3IDDA 5INHA 1EW9A 1URBA 2XRGA 3NKOA 3OT9A 1ED8A 1ELZA 1AJBA 3MK1A 2RH6A 1HDHA 2W5VA 4B56A 4UORA 4MIVA 4GTWA 1ZEBA 3IGZB 3NKPA 5EGEA 4KAYA 2GA3A 1EW8A 1P49A 1SHNA 1Y6VA 3NKNA 1KH7A 1ELYA 4MY4A 4ZG7A 1EQJA 1K7HA 3NKRA 3TWZA 3TG0A 5HRTA 3UN5A 3M8WA 3UN2A 4ZGAA 1KH5A 4LRFA 1KHKA 4NWXA 1KHNA 4CYRA 1N2KA 4LR7A 3M7VA 4KM4A 4UPKA 3E2DA 3ED4A 1E2SP 3B5QA 4KJGA 4UPHA 1O99A 1AJDA 1URAA 3SZYA 2GLQA 1SHQA 2W5SA 4GTZA 5IJSA 3BDGA 1ZEFA 1KH4A 2GSOA 4UOPA 1E33P 2ANHA 3IGYB 4LREA 1ED9A 5IJQA 3M8ZA 3T00A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5AJ9 A;  1HJK A;  4GTY A;  3T02 A;  3UN3 A;  2G9Y A;  3WAX A;  3SZZ A;  3NKM A;  4LRB A;  4LRD A;  2IFY A;  1ALK A;  3LXQ A;  3DPC A;  4QAX A;  3M8Y A;  2W5W A;  2X98 A;  3Q3Q A;  3TX0 A;  3CMR A;  1EJJ A;  2XR9 A;  5L0K A;  1Y7A A;  1KHJ A;  3UNY A;  4YR1 A;  4LR8 A;  3DYC A;  3KD8 A;  5L0B A;  3WAW A;  4CXK A;  5EGH A;  4LQY A;  4LR9 A;  2VQR A;  3BDG B;  3MK2 A;  2IUC A;  2IUC B;  1FSU A;  2GSU A;  1ALJ A;  3T01 A;  4UOO A;  2QZU A;  3UO0 A;  3BDH A;  3WAV A;  5DLV A;  4CXU A;  1EW2 A;  4GTX A;  4CYS A;  1ELX A;  3BDF A;  3WBH A;  4UPI A;  5GRR A;  2W5Q A;  4ZG6 A;  1AJA A;  5C66 A;  4FDI A;  5LQQ A;  5LIA A;  5DLW A;  5LRM A;  1KHL A;  1E1Z P;  2D1G A;  5KXA A;  1HQA A;  1ANJ A;  3MK0 A;  1AJC A;  4TN0 A;  1KH9 A;  5DLT A;  4UPL A;  1ANI A;  5K4P A;  2W5X A;  1O98 A;  4N7T A;  3NVL A;  4CXS A;  1N2L A;  1ZED A;  2W5R A;  2W8D A;  4LR2 A;  2W5T A;  1E3C P;  5TJ3 A;  3WAY A;  4FDJ A;  2ZKT A;  1ALI A;  4NWJ A;  5LRN A;  3NKQ A;  2W8S A;  1EI6 A;  4ZG9 A;  4MHX A;  1B8J A;  4LRA A;  2GSN A;  4KJD A;  5L0E A;  3A52 A;  4KAV A;  5GOV A;  4LRC A;  1ALH A;  1AUK A;  3IDD A;  5INH A;  1EW9 A;  1URB A;  2XRG A;  3NKO A;  3OT9 A;  1ED8 A;  1ELZ A;  1AJB A;  3MK1 A;  2RH6 A;  1HDH A;  2W5V A;  4B56 A;  4UOR A;  4MIV A;  4GTW A;  1ZEB A;  3IGZ B;  3NKP A;  5EGE A;  4KAY A;  2GA3 A;  1EW8 A;  1P49 A;  1SHN A;  1Y6V A;  3NKN A;  1KH7 A;  1ELY A;  4MY4 A;  4ZG7 A;  1EQJ A;  1K7H A;  3NKR A;  3TWZ A;  3TG0 A;  5HRT A;  3UN5 A;  3M8W A;  3UN2 A;  4ZGA A;  1KH5 A;  4LRF A;  1KHK A;  4NWX A;  1KHN A;  4CYR A;  1N2K A;  4LR7 A;  3M7V A;  4KM4 A;  4UPK A;  3E2D A;  3ED4 A;  1E2S P;  3B5Q A;  4KJG A;  4UPH A;  1O99 A;  1AJD A;  1URA A;  3SZY A;  2GLQ A;  1SHQ A;  2W5S A;  4GTZ A;  5IJS A;  3BDG A;  1ZEF A;  1KH4 A;  2GSO A;  4UOP A;  1E33 P;  2ANH A;  3IGY B;  4LRE A;  1ED9 A;  5IJQ A;  3M8Z A;  3T00 A; 
#chains in the Genus database with same CATH topology
 5AJ9 A;  1HJK A;  4GTY A;  3T02 A;  3UN3 A;  2G9Y A;  3WAX A;  3SZZ A;  3NKM A;  4LRB A;  4LRD A;  2IFY A;  1ALK A;  3LXQ A;  3DPC A;  4QAX A;  3M8Y A;  2W5W A;  2X98 A;  3Q3Q A;  3TX0 A;  3CMR A;  1EJJ A;  2XR9 A;  5L0K A;  1Y7A A;  1KHJ A;  3UNY A;  4YR1 A;  4LR8 A;  3DYC A;  3KD8 A;  5L0B A;  3WAW A;  4CXK A;  5EGH A;  4LQY A;  4LR9 A;  2VQR A;  3BDG B;  3MK2 A;  2IUC A;  2IUC B;  1FSU A;  2GSU A;  1ALJ A;  3T01 A;  4UOO A;  2QZU A;  3UO0 A;  3BDH A;  3WAV A;  5DLV A;  4CXU A;  1EW2 A;  4GTX A;  4CYS A;  1ELX A;  3BDF A;  3WBH A;  4UPI A;  5GRR A;  2W5Q A;  4ZG6 A;  1AJA A;  5C66 A;  4FDI A;  5LQQ A;  5LIA A;  5DLW A;  5LRM A;  1KHL A;  1E1Z P;  2D1G A;  5KXA A;  1HQA A;  1ANJ A;  3MK0 A;  1AJC A;  4TN0 A;  1KH9 A;  5DLT A;  4UPL A;  1ANI A;  5K4P A;  2W5X A;  1O98 A;  4N7T A;  3NVL A;  4CXS A;  1N2L A;  1ZED A;  2W5R A;  2W8D A;  4LR2 A;  2W5T A;  1E3C P;  5TJ3 A;  3WAY A;  4FDJ A;  2ZKT A;  1ALI A;  4NWJ A;  5LRN A;  3NKQ A;  2W8S A;  1EI6 A;  4ZG9 A;  4MHX A;  1B8J A;  4LRA A;  2GSN A;  4KJD A;  5L0E A;  3A52 A;  4KAV A;  5GOV A;  4LRC A;  1ALH A;  1AUK A;  3IDD A;  5INH A;  1EW9 A;  1URB A;  2XRG A;  3NKO A;  3OT9 A;  1ED8 A;  1ELZ A;  1AJB A;  3MK1 A;  2RH6 A;  1HDH A;  2W5V A;  4B56 A;  4UOR A;  4MIV A;  4GTW A;  1ZEB A;  3IGZ B;  3NKP A;  5EGE A;  4KAY A;  2GA3 A;  1EW8 A;  1P49 A;  1SHN A;  1Y6V A;  3NKN A;  1KH7 A;  1ELY A;  4MY4 A;  4ZG7 A;  1EQJ A;  1K7H A;  3NKR A;  3TWZ A;  3TG0 A;  5HRT A;  3UN5 A;  3M8W A;  3UN2 A;  4ZGA A;  1KH5 A;  4LRF A;  1KHK A;  4NWX A;  1KHN A;  4CYR A;  1N2K A;  4LR7 A;  3M7V A;  4KM4 A;  4UPK A;  3E2D A;  3ED4 A;  1E2S P;  3B5Q A;  4KJG A;  4UPH A;  1O99 A;  1AJD A;  1URA A;  3SZY A;  2GLQ A;  1SHQ A;  2W5S A;  4GTZ A;  5IJS A;  3BDG A;  1ZEF A;  1KH4 A;  2GSO A;  4UOP A;  1E33 P;  2ANH A;  3IGY B;  4LRE A;  1ED9 A;  5IJQ A;  3M8Z A;  3T00 A; 
#chains in the Genus database with same CATH homology
 5AJ9 A;  1HJK A;  4GTY A;  3T02 A;  3UN3 A;  2G9Y A;  3WAX A;  3SZZ A;  3NKM A;  4LRB A;  4LRD A;  2IFY A;  1ALK A;  3LXQ A;  3DPC A;  4QAX A;  3M8Y A;  2W5W A;  2X98 A;  3Q3Q A;  3TX0 A;  3CMR A;  1EJJ A;  2XR9 A;  5L0K A;  1Y7A A;  1KHJ A;  3UNY A;  4YR1 A;  4LR8 A;  3DYC A;  3KD8 A;  5L0B A;  3WAW A;  4CXK A;  5EGH A;  4LQY A;  4LR9 A;  2VQR A;  3BDG B;  3MK2 A;  2IUC A;  2IUC B;  1FSU A;  2GSU A;  1ALJ A;  3T01 A;  4UOO A;  2QZU A;  3UO0 A;  3BDH A;  3WAV A;  5DLV A;  4CXU A;  1EW2 A;  4GTX A;  4CYS A;  1ELX A;  3BDF A;  3WBH A;  4UPI A;  5GRR A;  2W5Q A;  4ZG6 A;  1AJA A;  5C66 A;  4FDI A;  5LQQ A;  5LIA A;  5DLW A;  5LRM A;  1KHL A;  1E1Z P;  2D1G A;  5KXA A;  1HQA A;  1ANJ A;  3MK0 A;  1AJC A;  4TN0 A;  1KH9 A;  5DLT A;  4UPL A;  1ANI A;  5K4P A;  2W5X A;  1O98 A;  4N7T A;  3NVL A;  4CXS A;  1N2L A;  1ZED A;  2W5R A;  2W8D A;  4LR2 A;  2W5T A;  1E3C P;  5TJ3 A;  3WAY A;  4FDJ A;  2ZKT A;  1ALI A;  4NWJ A;  5LRN A;  3NKQ A;  2W8S A;  1EI6 A;  4ZG9 A;  4MHX A;  1B8J A;  4LRA A;  2GSN A;  4KJD A;  5L0E A;  3A52 A;  4KAV A;  5GOV A;  4LRC A;  1ALH A;  1AUK A;  3IDD A;  5INH A;  1EW9 A;  1URB A;  2XRG A;  3NKO A;  3OT9 A;  1ED8 A;  1ELZ A;  1AJB A;  3MK1 A;  2RH6 A;  1HDH A;  2W5V A;  4B56 A;  4UOR A;  4MIV A;  4GTW A;  1ZEB A;  3IGZ B;  3NKP A;  5EGE A;  4KAY A;  2GA3 A;  1EW8 A;  1P49 A;  1SHN A;  1Y6V A;  3NKN A;  1KH7 A;  1ELY A;  4MY4 A;  4ZG7 A;  1EQJ A;  1K7H A;  3NKR A;  3TWZ A;  3TG0 A;  5HRT A;  3UN5 A;  3M8W A;  3UN2 A;  4ZGA A;  1KH5 A;  4LRF A;  1KHK A;  4NWX A;  1KHN A;  4CYR A;  1N2K A;  4LR7 A;  3M7V A;  4KM4 A;  4UPK A;  3E2D A;  3ED4 A;  1E2S P;  3B5Q A;  4KJG A;  4UPH A;  1O99 A;  1AJD A;  1URA A;  3SZY A;  2GLQ A;  1SHQ A;  2W5S A;  4GTZ A;  5IJS A;  3BDG A;  1ZEF A;  1KH4 A;  2GSO A;  4UOP A;  1E33 P;  2ANH A;  3IGY B;  4LRE A;  1ED9 A;  5IJQ A;  3M8Z A;  3T00 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...