2W8DA

Distinct and essential morphogenic functions for wall- and lipo- teichoic acids in bacillus subtilis
Total Genus 141
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
Knots found
sequence length
420
structure length
419
Chain Sequence
DSSDVTEVENYMKANYDVPNNVYFGKAEGKNVIYVSLESLQSFIIDYKIDGKEVTPFLNKLAHDNETFYFDNFFHQTGQGKSDAEFMMENSLYPLAQGSVFVNKAQNTLQSVPAILKSKNYTSATFHGNTQTFWNRNEMYKAEGIDKFFDSAYYDMNEENTKNYGMKDKPFFKESMPLLESLPQPFYTKFITLSNHFPFGMDEGDTDFPAGDFGDSVVDNYFQSAHYLDQSIEQFFNDLKKDGLYDKSIIVMYGDHYGISENHNKAMAKVLGKDEITDYDNAQLQRVPLFIHAAGVKGEKVHKYAGDVDVAPTILHLLGVDTKDYLMSGSDILSKEHREVIPFRNGDFISPKYTKISGKYYDTKTGKELDESEVDKSEDSLVKKELEMSDKIINGDLLRFYEPKGFKKVNPSDYDYTKH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords PROCESSED GLYCEROL PHOSPHATE LIPOTEICHOIC ACID SYNTHASE 2
publication title Distinct and Essential Morphogenic Functions for Wall- and Lipo-Teichoic Acids in Bacillus Subtilis
pubmed doi rcsb
source organism Bacillus subtilis
total genus 141
structure length 419
sequence length 420
chains with identical sequence B
other databases KnotProt 2.0: S +31
ec nomenclature ec 2.7.8.-:
pdb deposition date 2009-01-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00884 Sulfatase Sulfatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 2w8dA02
2GSNA 1K7HA 2XR9A 3A52A 1ELZA 4KAYA 4YR1A 1KH5A 2W5XA 2GSUA 1EQJA 4N7TA 4LR2A 1KH7A 3SZYA 4LRBA 1HQAA 2GLQA 5TJ3A 3UN3A 1KHKA 5LRMA 3WAYA 2RH6A 1ALIA 4LR9A 5LQQA 4UPIA 3M8YA 5INHA 1SHNA 3B5QA 1Y7AA 5EGEA 1ANJA 3TX0A 1EW9A 4ZG6A 1ZEDA 2IUCB 2QZUA 4GTWA 4NWXA 3UO0A 3NKMA 5EGHA 3T01A 4CXSA 3T02A 3DYCA 5KXAA 4ZG7A 5DLVA 1ALKA 1ZEFA 5GOVA 3NKOA 5LRNA 1Y6VA 2D1GA 3OT9A 3TG0A 2W8SA 1HJKA 3MK0A 4CXUA 1P49A 1ALHA 2W5TA 1EI6A 4GTYA 4LRFA 4FDJA 5DLWA 2VQRA 2GSOA 4MY4A 1AJCA 1URAA 4GTZA 3WAWA 4TN0A 1ALJA 1AJAA 5IJQA 3NVLA 5C66A 5L0KA 4ZGAA 1AJDA 2W5QA 2XRGA 4CXKA 1N2LA 1B8JA 4MHXA 5AJ9A 4UPLA 1KH9A 1ZEBA 1KH4A 3BDGB 4LR7A 4LREA 3WBHA 4CYRA 1KHNA 3DPCA 2ANHA 3Q3QA 5DLTA 3NKQA 3NKNA 1ED9A 1KHJA 2X98A 4UPHA 4ZG9A 1URBA 1EW2A 3IDDA 5K4PA 4UOOA 5GRRA 3IGZB 1AUKA 4LRDA 4QAXA 3MK1A 4FDIA 5L0BA 1ELXA 3KD8A 5HRTA 3UN5A 4LRAA 1E3CP 3BDFA 1FSUA 2W5SA 4KJDA 4CYSA 1E2SP 1E1ZP 1EJJA 1KHLA 1EW8A 3M8WA 2G9YA 1O98A 1E33P 2W5WA 3E2DA 3NKPA 4GTXA 3TWZA 3M8ZA 2W8DA 3MK2A 1ED8A 2GA3A 3T00A 2W5VA 1AJBA 1ELYA 4MIVA 3NKRA 1SHQA 4KM4A 2IUCA 4LRCA 3BDHA 4NWJA 4UPKA 3UN2A 4KAVA 4KJGA 2W5RA 3BDGA 3CMRA 3M7VA 3WAXA 4B56A 3ED4A 1ANIA 3SZZA 1HDHA 4UOPA 5L0EA 1N2KA 4LQYA 3UNYA 2ZKTA 3WAVA 4LR8A 4UORA 3LXQA 3IGYB 5LIAA 2IFYA 1O99A 5IJSA
chains in the Genus database with same CATH superfamily
2GSNA 1K7HA 2XR9A 3A52A 1ELZA 4KAYA 4YR1A 1KH5A 2W5XA 2GSUA 1EQJA 4N7TA 4LR2A 1KH7A 3SZYA 4LRBA 1HQAA 2GLQA 5TJ3A 3UN3A 1KHKA 5LRMA 3WAYA 2RH6A 1ALIA 4LR9A 5LQQA 4UPIA 3M8YA 5INHA 1SHNA 3B5QA 1Y7AA 5EGEA 1ANJA 3TX0A 1EW9A 4ZG6A 1ZEDA 2IUCB 2QZUA 4GTWA 4NWXA 3UO0A 3NKMA 5EGHA 3T01A 4CXSA 3T02A 3DYCA 5KXAA 4ZG7A 5DLVA 1ALKA 1ZEFA 5GOVA 3NKOA 5LRNA 1Y6VA 2D1GA 3OT9A 3TG0A 2W8SA 1HJKA 3MK0A 4CXUA 1P49A 1ALHA 2W5TA 1EI6A 4GTYA 4LRFA 4FDJA 5DLWA 2VQRA 2GSOA 4MY4A 1AJCA 1URAA 4GTZA 3WAWA 4TN0A 1ALJA 1AJAA 5IJQA 3NVLA 5C66A 5L0KA 4ZGAA 1AJDA 2W5QA 2XRGA 4CXKA 1N2LA 1B8JA 4MHXA 5AJ9A 4UPLA 1KH9A 1ZEBA 1KH4A 3BDGB 4LR7A 4LREA 3WBHA 4CYRA 1KHNA 3DPCA 2ANHA 3Q3QA 5DLTA 3NKQA 3NKNA 1ED9A 1KHJA 2X98A 4UPHA 4ZG9A 1URBA 1EW2A 3IDDA 5K4PA 4UOOA 5GRRA 3IGZB 1AUKA 4LRDA 4QAXA 3MK1A 4FDIA 5L0BA 1ELXA 3KD8A 5HRTA 3UN5A 4LRAA 1E3CP 3BDFA 1FSUA 2W5SA 4KJDA 4CYSA 1E2SP 1E1ZP 1EJJA 1KHLA 1EW8A 3M8WA 2G9YA 1O98A 1E33P 2W5WA 3E2DA 3NKPA 4GTXA 3TWZA 3M8ZA 2W8DA 3MK2A 1ED8A 2GA3A 3T00A 2W5VA 1AJBA 1ELYA 4MIVA 3NKRA 1SHQA 4KM4A 2IUCA 4LRCA 3BDHA 4NWJA 4UPKA 3UN2A 4KAVA 4KJGA 2W5RA 3BDGA 3CMRA 3M7VA 3WAXA 4B56A 3ED4A 1ANIA 3SZZA 1HDHA 4UOPA 5L0EA 1N2KA 4LQYA 3UNYA 2ZKTA 3WAVA 4LR8A 4UORA 3LXQA 3IGYB 5LIAA 2IFYA 1O99A 5IJSA
chains in the Genus database with same CATH topology
2GSNA 1K7HA 2XR9A 3A52A 1ELZA 4KAYA 4YR1A 1KH5A 2W5XA 2GSUA 1EQJA 4N7TA 4LR2A 1KH7A 3SZYA 4LRBA 1HQAA 2GLQA 5TJ3A 3UN3A 1KHKA 5LRMA 3WAYA 2RH6A 1ALIA 4LR9A 5LQQA 4UPIA 3M8YA 5INHA 1SHNA 3B5QA 1Y7AA 5EGEA 1ANJA 3TX0A 1EW9A 4ZG6A 1ZEDA 2IUCB 2QZUA 4GTWA 4NWXA 3UO0A 3NKMA 5EGHA 3T01A 4CXSA 3T02A 3DYCA 5KXAA 4ZG7A 5DLVA 1ALKA 1ZEFA 5GOVA 3NKOA 5LRNA 1Y6VA 2D1GA 3OT9A 3TG0A 2W8SA 1HJKA 3MK0A 4CXUA 1P49A 1ALHA 2W5TA 1EI6A 4GTYA 4LRFA 4FDJA 5DLWA 2VQRA 2GSOA 4MY4A 1AJCA 1URAA 4GTZA 3WAWA 4TN0A 1ALJA 1AJAA 5IJQA 3NVLA 5C66A 5L0KA 4ZGAA 1AJDA 2W5QA 2XRGA 4CXKA 1N2LA 1B8JA 4MHXA 5AJ9A 4UPLA 1KH9A 1ZEBA 1KH4A 3BDGB 4LR7A 4LREA 3WBHA 4CYRA 1KHNA 3DPCA 2ANHA 3Q3QA 5DLTA 3NKQA 3NKNA 1ED9A 1KHJA 2X98A 4UPHA 4ZG9A 1URBA 1EW2A 3IDDA 5K4PA 4UOOA 5GRRA 3IGZB 1AUKA 4LRDA 4QAXA 3MK1A 4FDIA 5L0BA 1ELXA 3KD8A 5HRTA 3UN5A 4LRAA 1E3CP 3BDFA 1FSUA 2W5SA 4KJDA 4CYSA 1E2SP 1E1ZP 1EJJA 1KHLA 1EW8A 3M8WA 2G9YA 1O98A 1E33P 2W5WA 3E2DA 3NKPA 4GTXA 3TWZA 3M8ZA 2W8DA 3MK2A 1ED8A 2GA3A 3T00A 2W5VA 1AJBA 1ELYA 4MIVA 3NKRA 1SHQA 4KM4A 2IUCA 4LRCA 3BDHA 4NWJA 4UPKA 3UN2A 4KAVA 4KJGA 2W5RA 3BDGA 3CMRA 3M7VA 3WAXA 4B56A 3ED4A 1ANIA 3SZZA 1HDHA 4UOPA 5L0EA 1N2KA 4LQYA 3UNYA 2ZKTA 3WAVA 4LR8A 4UORA 3LXQA 3IGYB 5LIAA 2IFYA 1O99A 5IJSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GSN A;  1K7H A;  2XR9 A;  3A52 A;  1ELZ A;  4KAY A;  4YR1 A;  1KH5 A;  2W5X A;  2GSU A;  1EQJ A;  4N7T A;  4LR2 A;  1KH7 A;  3SZY A;  4LRB A;  1HQA A;  2GLQ A;  5TJ3 A;  3UN3 A;  1KHK A;  5LRM A;  3WAY A;  2RH6 A;  1ALI A;  4LR9 A;  5LQQ A;  4UPI A;  3M8Y A;  5INH A;  1SHN A;  3B5Q A;  1Y7A A;  5EGE A;  1ANJ A;  3TX0 A;  1EW9 A;  4ZG6 A;  1ZED A;  2IUC B;  2QZU A;  4GTW A;  4NWX A;  3UO0 A;  3NKM A;  5EGH A;  3T01 A;  4CXS A;  3T02 A;  3DYC A;  5KXA A;  4ZG7 A;  5DLV A;  1ALK A;  1ZEF A;  5GOV A;  3NKO A;  5LRN A;  1Y6V A;  2D1G A;  3OT9 A;  3TG0 A;  2W8S A;  1HJK A;  3MK0 A;  4CXU A;  1P49 A;  1ALH A;  2W5T A;  1EI6 A;  4GTY A;  4LRF A;  4FDJ A;  5DLW A;  2VQR A;  2GSO A;  4MY4 A;  1AJC A;  1URA A;  4GTZ A;  3WAW A;  4TN0 A;  1ALJ A;  1AJA A;  5IJQ A;  3NVL A;  5C66 A;  5L0K A;  4ZGA A;  1AJD A;  2W5Q A;  2XRG A;  4CXK A;  1N2L A;  1B8J A;  4MHX A;  5AJ9 A;  4UPL A;  1KH9 A;  1ZEB A;  1KH4 A;  3BDG B;  4LR7 A;  4LRE A;  3WBH A;  4CYR A;  1KHN A;  3DPC A;  2ANH A;  3Q3Q A;  5DLT A;  3NKQ A;  3NKN A;  1ED9 A;  1KHJ A;  2X98 A;  4UPH A;  4ZG9 A;  1URB A;  1EW2 A;  3IDD A;  5K4P A;  4UOO A;  5GRR A;  3IGZ B;  1AUK A;  4LRD A;  4QAX A;  3MK1 A;  4FDI A;  5L0B A;  1ELX A;  3KD8 A;  5HRT A;  3UN5 A;  4LRA A;  1E3C P;  3BDF A;  1FSU A;  2W5S A;  4KJD A;  4CYS A;  1E2S P;  1E1Z P;  1EJJ A;  1KHL A;  1EW8 A;  3M8W A;  2G9Y A;  1O98 A;  1E33 P;  2W5W A;  3E2D A;  3NKP A;  4GTX A;  3TWZ A;  3M8Z A;  2W8D A;  3MK2 A;  1ED8 A;  2GA3 A;  3T00 A;  2W5V A;  1AJB A;  1ELY A;  4MIV A;  3NKR A;  1SHQ A;  4KM4 A;  2IUC A;  4LRC A;  3BDH A;  4NWJ A;  4UPK A;  3UN2 A;  4KAV A;  4KJG A;  2W5R A;  3BDG A;  3CMR A;  3M7V A;  3WAX A;  4B56 A;  3ED4 A;  1ANI A;  3SZZ A;  1HDH A;  4UOP A;  5L0E A;  1N2K A;  4LQY A;  3UNY A;  2ZKT A;  3WAV A;  4LR8 A;  4UOR A;  3LXQ A;  3IGY B;  5LIA A;  2IFY A;  1O99 A;  5IJS A; 
#chains in the Genus database with same CATH topology
 2GSN A;  1K7H A;  2XR9 A;  3A52 A;  1ELZ A;  4KAY A;  4YR1 A;  1KH5 A;  2W5X A;  2GSU A;  1EQJ A;  4N7T A;  4LR2 A;  1KH7 A;  3SZY A;  4LRB A;  1HQA A;  2GLQ A;  5TJ3 A;  3UN3 A;  1KHK A;  5LRM A;  3WAY A;  2RH6 A;  1ALI A;  4LR9 A;  5LQQ A;  4UPI A;  3M8Y A;  5INH A;  1SHN A;  3B5Q A;  1Y7A A;  5EGE A;  1ANJ A;  3TX0 A;  1EW9 A;  4ZG6 A;  1ZED A;  2IUC B;  2QZU A;  4GTW A;  4NWX A;  3UO0 A;  3NKM A;  5EGH A;  3T01 A;  4CXS A;  3T02 A;  3DYC A;  5KXA A;  4ZG7 A;  5DLV A;  1ALK A;  1ZEF A;  5GOV A;  3NKO A;  5LRN A;  1Y6V A;  2D1G A;  3OT9 A;  3TG0 A;  2W8S A;  1HJK A;  3MK0 A;  4CXU A;  1P49 A;  1ALH A;  2W5T A;  1EI6 A;  4GTY A;  4LRF A;  4FDJ A;  5DLW A;  2VQR A;  2GSO A;  4MY4 A;  1AJC A;  1URA A;  4GTZ A;  3WAW A;  4TN0 A;  1ALJ A;  1AJA A;  5IJQ A;  3NVL A;  5C66 A;  5L0K A;  4ZGA A;  1AJD A;  2W5Q A;  2XRG A;  4CXK A;  1N2L A;  1B8J A;  4MHX A;  5AJ9 A;  4UPL A;  1KH9 A;  1ZEB A;  1KH4 A;  3BDG B;  4LR7 A;  4LRE A;  3WBH A;  4CYR A;  1KHN A;  3DPC A;  2ANH A;  3Q3Q A;  5DLT A;  3NKQ A;  3NKN A;  1ED9 A;  1KHJ A;  2X98 A;  4UPH A;  4ZG9 A;  1URB A;  1EW2 A;  3IDD A;  5K4P A;  4UOO A;  5GRR A;  3IGZ B;  1AUK A;  4LRD A;  4QAX A;  3MK1 A;  4FDI A;  5L0B A;  1ELX A;  3KD8 A;  5HRT A;  3UN5 A;  4LRA A;  1E3C P;  3BDF A;  1FSU A;  2W5S A;  4KJD A;  4CYS A;  1E2S P;  1E1Z P;  1EJJ A;  1KHL A;  1EW8 A;  3M8W A;  2G9Y A;  1O98 A;  1E33 P;  2W5W A;  3E2D A;  3NKP A;  4GTX A;  3TWZ A;  3M8Z A;  2W8D A;  3MK2 A;  1ED8 A;  2GA3 A;  3T00 A;  2W5V A;  1AJB A;  1ELY A;  4MIV A;  3NKR A;  1SHQ A;  4KM4 A;  2IUC A;  4LRC A;  3BDH A;  4NWJ A;  4UPK A;  3UN2 A;  4KAV A;  4KJG A;  2W5R A;  3BDG A;  3CMR A;  3M7V A;  3WAX A;  4B56 A;  3ED4 A;  1ANI A;  3SZZ A;  1HDH A;  4UOP A;  5L0E A;  1N2K A;  4LQY A;  3UNY A;  2ZKT A;  3WAV A;  4LR8 A;  4UOR A;  3LXQ A;  3IGY B;  5LIA A;  2IFY A;  1O99 A;  5IJS A; 
#chains in the Genus database with same CATH homology
 2GSN A;  1K7H A;  2XR9 A;  3A52 A;  1ELZ A;  4KAY A;  4YR1 A;  1KH5 A;  2W5X A;  2GSU A;  1EQJ A;  4N7T A;  4LR2 A;  1KH7 A;  3SZY A;  4LRB A;  1HQA A;  2GLQ A;  5TJ3 A;  3UN3 A;  1KHK A;  5LRM A;  3WAY A;  2RH6 A;  1ALI A;  4LR9 A;  5LQQ A;  4UPI A;  3M8Y A;  5INH A;  1SHN A;  3B5Q A;  1Y7A A;  5EGE A;  1ANJ A;  3TX0 A;  1EW9 A;  4ZG6 A;  1ZED A;  2IUC B;  2QZU A;  4GTW A;  4NWX A;  3UO0 A;  3NKM A;  5EGH A;  3T01 A;  4CXS A;  3T02 A;  3DYC A;  5KXA A;  4ZG7 A;  5DLV A;  1ALK A;  1ZEF A;  5GOV A;  3NKO A;  5LRN A;  1Y6V A;  2D1G A;  3OT9 A;  3TG0 A;  2W8S A;  1HJK A;  3MK0 A;  4CXU A;  1P49 A;  1ALH A;  2W5T A;  1EI6 A;  4GTY A;  4LRF A;  4FDJ A;  5DLW A;  2VQR A;  2GSO A;  4MY4 A;  1AJC A;  1URA A;  4GTZ A;  3WAW A;  4TN0 A;  1ALJ A;  1AJA A;  5IJQ A;  3NVL A;  5C66 A;  5L0K A;  4ZGA A;  1AJD A;  2W5Q A;  2XRG A;  4CXK A;  1N2L A;  1B8J A;  4MHX A;  5AJ9 A;  4UPL A;  1KH9 A;  1ZEB A;  1KH4 A;  3BDG B;  4LR7 A;  4LRE A;  3WBH A;  4CYR A;  1KHN A;  3DPC A;  2ANH A;  3Q3Q A;  5DLT A;  3NKQ A;  3NKN A;  1ED9 A;  1KHJ A;  2X98 A;  4UPH A;  4ZG9 A;  1URB A;  1EW2 A;  3IDD A;  5K4P A;  4UOO A;  5GRR A;  3IGZ B;  1AUK A;  4LRD A;  4QAX A;  3MK1 A;  4FDI A;  5L0B A;  1ELX A;  3KD8 A;  5HRT A;  3UN5 A;  4LRA A;  1E3C P;  3BDF A;  1FSU A;  2W5S A;  4KJD A;  4CYS A;  1E2S P;  1E1Z P;  1EJJ A;  1KHL A;  1EW8 A;  3M8W A;  2G9Y A;  1O98 A;  1E33 P;  2W5W A;  3E2D A;  3NKP A;  4GTX A;  3TWZ A;  3M8Z A;  2W8D A;  3MK2 A;  1ED8 A;  2GA3 A;  3T00 A;  2W5V A;  1AJB A;  1ELY A;  4MIV A;  3NKR A;  1SHQ A;  4KM4 A;  2IUC A;  4LRC A;  3BDH A;  4NWJ A;  4UPK A;  3UN2 A;  4KAV A;  4KJG A;  2W5R A;  3BDG A;  3CMR A;  3M7V A;  3WAX A;  4B56 A;  3ED4 A;  1ANI A;  3SZZ A;  1HDH A;  4UOP A;  5L0E A;  1N2K A;  4LQY A;  3UNY A;  2ZKT A;  3WAV A;  4LR8 A;  4UOR A;  3LXQ A;  3IGY B;  5LIA A;  2IFY A;  1O99 A;  5IJS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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