4TN0A

Crystal structure of the c-terminal periplasmic domain of phosphoethanolamine transferase eptc from campylobacter jejuni
Total Genus 121
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
121
Knots found
sequence length
311
structure length
307
Chain Sequence
MFKTIANDAYRHTKKLLVLVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTAAVSLPCMFSISKRENYSSSEFQENAMDVLYKTGVDAAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLLIPFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENGIYLHGMPYAIAPSYQTHIPAIFWSNDEKLMNLAKEHKGLKLSQDNLFSTLLGYFNVKTSVYEPEYDLLNPKLKANP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords UPF0141 protein yjdB
publication title Crystallographic study of the phosphoethanolamine transferase EptC required for polymyxin resistance and motility in Campylobacter jejuni.
pubmed doi rcsb
source organism Campylobacter jejuni subsp. jejuni hb93-13
total genus 121
structure length 307
sequence length 311
chains with identical sequence B, C
other databases KnotProt 2.0: S +31
ec nomenclature
pdb deposition date 2014-06-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 4tn0A00
1URBA 1EW9A 1ALHA 4MY4A 2GSNA 1N2KA 3UNYA 1N2LA 4UPIA 1AUKA 1KHJA 1E3CP 3DYCA 5IJSA 1ELZA 5L0EA 1ZEDA 4LR8A 1E33P 3MK1A 5K4PA 2XRGA 5TJ3A 4KM4A 3NKOA 2IFYA 5GOVA 2QZUA 3WAVA 1KH5A 3E2DA 5HRTA 2G9YA 3WAXA 5INHA 3T02A 2W5TA 4LR2A 3NKRA 1EW8A 5LRNA 2W5QA 4LREA 2GSOA 2VQRA 2W8SA 1ZEBA 1KH7A 3A52A 3BDGB 3M8YA 5LIAA 3NKMA 1ANJA 3WBHA 1EQJA 4ZGAA 3NKPA 1ELXA 1ALKA 1P49A 2W5VA 1KH9A 5IJQA 1FSUA 3IGYB 3M7VA 3T01A 3CMRA 4MHXA 1O98A 3BDHA 1SHQA 1AJAA 2X98A 3UN2A 4UORA 5DLTA 4ZG7A 5GRRA 4N7TA 5LRMA 4LRAA 2ZKTA 4LQYA 1AJCA 3IGZB 4YR1A 2W5XA 3M8WA 5L0KA 3SZZA 4UPLA 4LR9A 2GA3A 3NVLA 4GTXA 5EGEA 3TX0A 1HQAA 3NKNA 1Y6VA 1AJBA 3ED4A 5C66A 3Q3QA 2W5WA 3BDFA 4KAYA 4CXKA 4LRFA 3MK0A 3SZYA 3UO0A 1ED8A 1EJJA 2W5SA 5DLWA 4LRCA 4KJDA 4NWXA 4UPKA 3T00A 2GSUA 4CXUA 4FDJA 3MK2A 2RH6A 1KH4A 3LXQA 4LR7A 3WAWA 1HDHA 1E1ZP 3DPCA 2GLQA 3NKQA 1K7HA 4KJGA 4MIVA 4NWJA 1KHLA 5DLVA 4KAVA 4UOOA 4FDIA 2D1GA 1AJDA 1SHNA 1ZEFA 3IDDA 1KHNA 4GTYA 4ZG6A 4B56A 4CYSA 4ZG9A 2IUCA 2W5RA 1EW2A 4CYRA 1ELYA 1O99A 1E2SP 1Y7AA 5LQQA 4CXSA 1ED9A 5AJ9A 3TWZA 4GTWA 5KXAA 1URAA 4GTZA 3BDGA 4UOPA 2W8DA 3TG0A 1EI6A 1HJKA 1ANIA 3UN5A 4LRDA 2IUCB 3OT9A 2ANHA 3UN3A 5L0BA 1ALIA 4UPHA 3M8ZA 2XR9A 3B5QA 4TN0A 3WAYA 4QAXA 4LRBA 1ALJA 3KD8A 1KHKA 1B8JA 5EGHA
chains in the Genus database with same CATH superfamily
1URBA 1EW9A 1ALHA 4MY4A 2GSNA 1N2KA 3UNYA 1N2LA 4UPIA 1AUKA 1KHJA 1E3CP 3DYCA 5IJSA 1ELZA 5L0EA 1ZEDA 4LR8A 1E33P 3MK1A 5K4PA 2XRGA 5TJ3A 4KM4A 3NKOA 2IFYA 5GOVA 2QZUA 3WAVA 1KH5A 3E2DA 5HRTA 2G9YA 3WAXA 5INHA 3T02A 2W5TA 4LR2A 3NKRA 1EW8A 5LRNA 2W5QA 4LREA 2GSOA 2VQRA 2W8SA 1ZEBA 1KH7A 3A52A 3BDGB 3M8YA 5LIAA 3NKMA 1ANJA 3WBHA 1EQJA 4ZGAA 3NKPA 1ELXA 1ALKA 1P49A 2W5VA 1KH9A 5IJQA 1FSUA 3IGYB 3M7VA 3T01A 3CMRA 4MHXA 1O98A 3BDHA 1SHQA 1AJAA 2X98A 3UN2A 4UORA 5DLTA 4ZG7A 5GRRA 4N7TA 5LRMA 4LRAA 2ZKTA 4LQYA 1AJCA 3IGZB 4YR1A 2W5XA 3M8WA 5L0KA 3SZZA 4UPLA 4LR9A 2GA3A 3NVLA 4GTXA 5EGEA 3TX0A 1HQAA 3NKNA 1Y6VA 1AJBA 3ED4A 5C66A 3Q3QA 2W5WA 3BDFA 4KAYA 4CXKA 4LRFA 3MK0A 3SZYA 3UO0A 1ED8A 1EJJA 2W5SA 5DLWA 4LRCA 4KJDA 4NWXA 4UPKA 3T00A 2GSUA 4CXUA 4FDJA 3MK2A 2RH6A 1KH4A 3LXQA 4LR7A 3WAWA 1HDHA 1E1ZP 3DPCA 2GLQA 3NKQA 1K7HA 4KJGA 4MIVA 4NWJA 1KHLA 5DLVA 4KAVA 4UOOA 4FDIA 2D1GA 1AJDA 1SHNA 1ZEFA 3IDDA 1KHNA 4GTYA 4ZG6A 4B56A 4CYSA 4ZG9A 2IUCA 2W5RA 1EW2A 4CYRA 1ELYA 1O99A 1E2SP 1Y7AA 5LQQA 4CXSA 1ED9A 5AJ9A 3TWZA 4GTWA 5KXAA 1URAA 4GTZA 3BDGA 4UOPA 2W8DA 3TG0A 1EI6A 1HJKA 1ANIA 3UN5A 4LRDA 2IUCB 3OT9A 2ANHA 3UN3A 5L0BA 1ALIA 4UPHA 3M8ZA 2XR9A 3B5QA 4TN0A 3WAYA 4QAXA 4LRBA 1ALJA 3KD8A 1KHKA 1B8JA 5EGHA
chains in the Genus database with same CATH topology
1URBA 1EW9A 1ALHA 4MY4A 2GSNA 1N2KA 3UNYA 1N2LA 4UPIA 1AUKA 1KHJA 1E3CP 3DYCA 5IJSA 1ELZA 5L0EA 1ZEDA 4LR8A 1E33P 3MK1A 5K4PA 2XRGA 5TJ3A 4KM4A 3NKOA 2IFYA 5GOVA 2QZUA 3WAVA 1KH5A 3E2DA 5HRTA 2G9YA 3WAXA 5INHA 3T02A 2W5TA 4LR2A 3NKRA 1EW8A 5LRNA 2W5QA 4LREA 2GSOA 2VQRA 2W8SA 1ZEBA 1KH7A 3A52A 3BDGB 3M8YA 5LIAA 3NKMA 1ANJA 3WBHA 1EQJA 4ZGAA 3NKPA 1ELXA 1ALKA 1P49A 2W5VA 1KH9A 5IJQA 1FSUA 3IGYB 3M7VA 3T01A 3CMRA 4MHXA 1O98A 3BDHA 1SHQA 1AJAA 2X98A 3UN2A 4UORA 5DLTA 4ZG7A 5GRRA 4N7TA 5LRMA 4LRAA 2ZKTA 4LQYA 1AJCA 3IGZB 4YR1A 2W5XA 3M8WA 5L0KA 3SZZA 4UPLA 4LR9A 2GA3A 3NVLA 4GTXA 5EGEA 3TX0A 1HQAA 3NKNA 1Y6VA 1AJBA 3ED4A 5C66A 3Q3QA 2W5WA 3BDFA 4KAYA 4CXKA 4LRFA 3MK0A 3SZYA 3UO0A 1ED8A 1EJJA 2W5SA 5DLWA 4LRCA 4KJDA 4NWXA 4UPKA 3T00A 2GSUA 4CXUA 4FDJA 3MK2A 2RH6A 1KH4A 3LXQA 4LR7A 3WAWA 1HDHA 1E1ZP 3DPCA 2GLQA 3NKQA 1K7HA 4KJGA 4MIVA 4NWJA 1KHLA 5DLVA 4KAVA 4UOOA 4FDIA 2D1GA 1AJDA 1SHNA 1ZEFA 3IDDA 1KHNA 4GTYA 4ZG6A 4B56A 4CYSA 4ZG9A 2IUCA 2W5RA 1EW2A 4CYRA 1ELYA 1O99A 1E2SP 1Y7AA 5LQQA 4CXSA 1ED9A 5AJ9A 3TWZA 4GTWA 5KXAA 1URAA 4GTZA 3BDGA 4UOPA 2W8DA 3TG0A 1EI6A 1HJKA 1ANIA 3UN5A 4LRDA 2IUCB 3OT9A 2ANHA 3UN3A 5L0BA 1ALIA 4UPHA 3M8ZA 2XR9A 3B5QA 4TN0A 3WAYA 4QAXA 4LRBA 1ALJA 3KD8A 1KHKA 1B8JA 5EGHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1URB A;  1EW9 A;  1ALH A;  4MY4 A;  2GSN A;  1N2K A;  3UNY A;  1N2L A;  4UPI A;  1AUK A;  1KHJ A;  1E3C P;  3DYC A;  5IJS A;  1ELZ A;  5L0E A;  1ZED A;  4LR8 A;  1E33 P;  3MK1 A;  5K4P A;  2XRG A;  5TJ3 A;  4KM4 A;  3NKO A;  2IFY A;  5GOV A;  2QZU A;  3WAV A;  1KH5 A;  3E2D A;  5HRT A;  2G9Y A;  3WAX A;  5INH A;  3T02 A;  2W5T A;  4LR2 A;  3NKR A;  1EW8 A;  5LRN A;  2W5Q A;  4LRE A;  2GSO A;  2VQR A;  2W8S A;  1ZEB A;  1KH7 A;  3A52 A;  3BDG B;  3M8Y A;  5LIA A;  3NKM A;  1ANJ A;  3WBH A;  1EQJ A;  4ZGA A;  3NKP A;  1ELX A;  1ALK A;  1P49 A;  2W5V A;  1KH9 A;  5IJQ A;  1FSU A;  3IGY B;  3M7V A;  3T01 A;  3CMR A;  4MHX A;  1O98 A;  3BDH A;  1SHQ A;  1AJA A;  2X98 A;  3UN2 A;  4UOR A;  5DLT A;  4ZG7 A;  5GRR A;  4N7T A;  5LRM A;  4LRA A;  2ZKT A;  4LQY A;  1AJC A;  3IGZ B;  4YR1 A;  2W5X A;  3M8W A;  5L0K A;  3SZZ A;  4UPL A;  4LR9 A;  2GA3 A;  3NVL A;  4GTX A;  5EGE A;  3TX0 A;  1HQA A;  3NKN A;  1Y6V A;  1AJB A;  3ED4 A;  5C66 A;  3Q3Q A;  2W5W A;  3BDF A;  4KAY A;  4CXK A;  4LRF A;  3MK0 A;  3SZY A;  3UO0 A;  1ED8 A;  1EJJ A;  2W5S A;  5DLW A;  4LRC A;  4KJD A;  4NWX A;  4UPK A;  3T00 A;  2GSU A;  4CXU A;  4FDJ A;  3MK2 A;  2RH6 A;  1KH4 A;  3LXQ A;  4LR7 A;  3WAW A;  1HDH A;  1E1Z P;  3DPC A;  2GLQ A;  3NKQ A;  1K7H A;  4KJG A;  4MIV A;  4NWJ A;  1KHL A;  5DLV A;  4KAV A;  4UOO A;  4FDI A;  2D1G A;  1AJD A;  1SHN A;  1ZEF A;  3IDD A;  1KHN A;  4GTY A;  4ZG6 A;  4B56 A;  4CYS A;  4ZG9 A;  2IUC A;  2W5R A;  1EW2 A;  4CYR A;  1ELY A;  1O99 A;  1E2S P;  1Y7A A;  5LQQ A;  4CXS A;  1ED9 A;  5AJ9 A;  3TWZ A;  4GTW A;  5KXA A;  1URA A;  4GTZ A;  3BDG A;  4UOP A;  2W8D A;  3TG0 A;  1EI6 A;  1HJK A;  1ANI A;  3UN5 A;  4LRD A;  2IUC B;  3OT9 A;  2ANH A;  3UN3 A;  5L0B A;  1ALI A;  4UPH A;  3M8Z A;  2XR9 A;  3B5Q A;  4TN0 A;  3WAY A;  4QAX A;  4LRB A;  1ALJ A;  3KD8 A;  1KHK A;  1B8J A;  5EGH A; 
#chains in the Genus database with same CATH topology
 1URB A;  1EW9 A;  1ALH A;  4MY4 A;  2GSN A;  1N2K A;  3UNY A;  1N2L A;  4UPI A;  1AUK A;  1KHJ A;  1E3C P;  3DYC A;  5IJS A;  1ELZ A;  5L0E A;  1ZED A;  4LR8 A;  1E33 P;  3MK1 A;  5K4P A;  2XRG A;  5TJ3 A;  4KM4 A;  3NKO A;  2IFY A;  5GOV A;  2QZU A;  3WAV A;  1KH5 A;  3E2D A;  5HRT A;  2G9Y A;  3WAX A;  5INH A;  3T02 A;  2W5T A;  4LR2 A;  3NKR A;  1EW8 A;  5LRN A;  2W5Q A;  4LRE A;  2GSO A;  2VQR A;  2W8S A;  1ZEB A;  1KH7 A;  3A52 A;  3BDG B;  3M8Y A;  5LIA A;  3NKM A;  1ANJ A;  3WBH A;  1EQJ A;  4ZGA A;  3NKP A;  1ELX A;  1ALK A;  1P49 A;  2W5V A;  1KH9 A;  5IJQ A;  1FSU A;  3IGY B;  3M7V A;  3T01 A;  3CMR A;  4MHX A;  1O98 A;  3BDH A;  1SHQ A;  1AJA A;  2X98 A;  3UN2 A;  4UOR A;  5DLT A;  4ZG7 A;  5GRR A;  4N7T A;  5LRM A;  4LRA A;  2ZKT A;  4LQY A;  1AJC A;  3IGZ B;  4YR1 A;  2W5X A;  3M8W A;  5L0K A;  3SZZ A;  4UPL A;  4LR9 A;  2GA3 A;  3NVL A;  4GTX A;  5EGE A;  3TX0 A;  1HQA A;  3NKN A;  1Y6V A;  1AJB A;  3ED4 A;  5C66 A;  3Q3Q A;  2W5W A;  3BDF A;  4KAY A;  4CXK A;  4LRF A;  3MK0 A;  3SZY A;  3UO0 A;  1ED8 A;  1EJJ A;  2W5S A;  5DLW A;  4LRC A;  4KJD A;  4NWX A;  4UPK A;  3T00 A;  2GSU A;  4CXU A;  4FDJ A;  3MK2 A;  2RH6 A;  1KH4 A;  3LXQ A;  4LR7 A;  3WAW A;  1HDH A;  1E1Z P;  3DPC A;  2GLQ A;  3NKQ A;  1K7H A;  4KJG A;  4MIV A;  4NWJ A;  1KHL A;  5DLV A;  4KAV A;  4UOO A;  4FDI A;  2D1G A;  1AJD A;  1SHN A;  1ZEF A;  3IDD A;  1KHN A;  4GTY A;  4ZG6 A;  4B56 A;  4CYS A;  4ZG9 A;  2IUC A;  2W5R A;  1EW2 A;  4CYR A;  1ELY A;  1O99 A;  1E2S P;  1Y7A A;  5LQQ A;  4CXS A;  1ED9 A;  5AJ9 A;  3TWZ A;  4GTW A;  5KXA A;  1URA A;  4GTZ A;  3BDG A;  4UOP A;  2W8D A;  3TG0 A;  1EI6 A;  1HJK A;  1ANI A;  3UN5 A;  4LRD A;  2IUC B;  3OT9 A;  2ANH A;  3UN3 A;  5L0B A;  1ALI A;  4UPH A;  3M8Z A;  2XR9 A;  3B5Q A;  4TN0 A;  3WAY A;  4QAX A;  4LRB A;  1ALJ A;  3KD8 A;  1KHK A;  1B8J A;  5EGH A; 
#chains in the Genus database with same CATH homology
 1URB A;  1EW9 A;  1ALH A;  4MY4 A;  2GSN A;  1N2K A;  3UNY A;  1N2L A;  4UPI A;  1AUK A;  1KHJ A;  1E3C P;  3DYC A;  5IJS A;  1ELZ A;  5L0E A;  1ZED A;  4LR8 A;  1E33 P;  3MK1 A;  5K4P A;  2XRG A;  5TJ3 A;  4KM4 A;  3NKO A;  2IFY A;  5GOV A;  2QZU A;  3WAV A;  1KH5 A;  3E2D A;  5HRT A;  2G9Y A;  3WAX A;  5INH A;  3T02 A;  2W5T A;  4LR2 A;  3NKR A;  1EW8 A;  5LRN A;  2W5Q A;  4LRE A;  2GSO A;  2VQR A;  2W8S A;  1ZEB A;  1KH7 A;  3A52 A;  3BDG B;  3M8Y A;  5LIA A;  3NKM A;  1ANJ A;  3WBH A;  1EQJ A;  4ZGA A;  3NKP A;  1ELX A;  1ALK A;  1P49 A;  2W5V A;  1KH9 A;  5IJQ A;  1FSU A;  3IGY B;  3M7V A;  3T01 A;  3CMR A;  4MHX A;  1O98 A;  3BDH A;  1SHQ A;  1AJA A;  2X98 A;  3UN2 A;  4UOR A;  5DLT A;  4ZG7 A;  5GRR A;  4N7T A;  5LRM A;  4LRA A;  2ZKT A;  4LQY A;  1AJC A;  3IGZ B;  4YR1 A;  2W5X A;  3M8W A;  5L0K A;  3SZZ A;  4UPL A;  4LR9 A;  2GA3 A;  3NVL A;  4GTX A;  5EGE A;  3TX0 A;  1HQA A;  3NKN A;  1Y6V A;  1AJB A;  3ED4 A;  5C66 A;  3Q3Q A;  2W5W A;  3BDF A;  4KAY A;  4CXK A;  4LRF A;  3MK0 A;  3SZY A;  3UO0 A;  1ED8 A;  1EJJ A;  2W5S A;  5DLW A;  4LRC A;  4KJD A;  4NWX A;  4UPK A;  3T00 A;  2GSU A;  4CXU A;  4FDJ A;  3MK2 A;  2RH6 A;  1KH4 A;  3LXQ A;  4LR7 A;  3WAW A;  1HDH A;  1E1Z P;  3DPC A;  2GLQ A;  3NKQ A;  1K7H A;  4KJG A;  4MIV A;  4NWJ A;  1KHL A;  5DLV A;  4KAV A;  4UOO A;  4FDI A;  2D1G A;  1AJD A;  1SHN A;  1ZEF A;  3IDD A;  1KHN A;  4GTY A;  4ZG6 A;  4B56 A;  4CYS A;  4ZG9 A;  2IUC A;  2W5R A;  1EW2 A;  4CYR A;  1ELY A;  1O99 A;  1E2S P;  1Y7A A;  5LQQ A;  4CXS A;  1ED9 A;  5AJ9 A;  3TWZ A;  4GTW A;  5KXA A;  1URA A;  4GTZ A;  3BDG A;  4UOP A;  2W8D A;  3TG0 A;  1EI6 A;  1HJK A;  1ANI A;  3UN5 A;  4LRD A;  2IUC B;  3OT9 A;  2ANH A;  3UN3 A;  5L0B A;  1ALI A;  4UPH A;  3M8Z A;  2XR9 A;  3B5Q A;  4TN0 A;  3WAY A;  4QAX A;  4LRB A;  1ALJ A;  3KD8 A;  1KHK A;  1B8J A;  5EGH A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...