4TN0A

Crystal structure of the c-terminal periplasmic domain of phosphoethanolamine transferase eptc from campylobacter jejuni
Total Genus 121
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
121
Knots found
sequence length
311
structure length
307
Chain Sequence
MFKTIANDAYRHTKKLLVLVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTAAVSLPCMFSISKRENYSSSEFQENAMDVLYKTGVDAAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLLIPFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENGIYLHGMPYAIAPSYQTHIPAIFWSNDEKLMNLAKEHKGLKLSQDNLFSTLLGYFNVKTSVYEPEYDLLNPKLKANP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords UPF0141 protein yjdB
publication title Crystallographic study of the phosphoethanolamine transferase EptC required for polymyxin resistance and motility in Campylobacter jejuni.
pubmed doi rcsb
source organism Campylobacter jejuni subsp. jejuni hb93-13
molecule tags Transferase
total genus 121
structure length 307
sequence length 311
chains with identical sequence B, C
other databases KnotProt 2.0: S +31
ec nomenclature
pdb deposition date 2014-06-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 4tn0A00
1ELYA 3MK1A 4KAYA 2G9YA 3BDGA 3NVLA 3UNYA 2GSNA 3Q3QA 4TN0A 3TWZA 1E33P 4ZG6A 2GSUA 5EGHA 4LR2A 3TX0A 1EW2A 4LREA 3NKNA 1KHJA 5L0KA 4KJGA 2GLQA 3MK0A 5TJ3A 1KH4A 1ALHA 2W5TA 3IGZB 3TG0A 1KH7A 3ED4A 2IUCA 5LRMA 1EJJA 4MY4A 3M8ZA 2W8SA 4ZG9A 3BDGB 5IJSA 4FDIA 4CXUA 5K4PA 4ZGAA 1O99A 2D1GA 4LR8A 3M7VA 1SHNA 1E2SP 4CXSA 3UO0A 4LRCA 3WBHA 4KAVA 5L0EA 3MK2A 4UOPA 1EW9A 1EQJA 1HDHA 4MIVA 2GSOA 3A52A 3WAYA 5LIAA 1N2KA 3NKPA 2GA3A 1E1ZP 1KHLA 4YR1A 5C66A 2IUCB 2W8DA 1URAA 2QZUA 1URBA 1EI6A 1SHQA 4GTYA 3T02A 3WAVA 2VQRA 4FDJA 3DYCA 1AJBA 4MHXA 5GRRA 1FSUA 1KHNA 3UN2A 1ZEDA 2ANHA 3T01A 4CYRA 1ELXA 4UPHA 5AJ9A 5GOVA 1ALKA 3IDDA 1ZEFA 5DLVA 3BDHA 4B56A 2IFYA 5LRNA 1ALJA 2X98A 2RH6A 2W5SA 3E2DA 1N2LA 1AJCA 2W5VA 4CXKA 1ANIA 1HQAA 4GTZA 2W5XA 4LRDA 5DLTA 1KHKA 4NWXA 1E3CP 1B8JA 3M8WA 4LR7A 1O98A 1ANJA 3IGYB 3WAWA 1AJDA 4GTWA 4UOOA 4UPLA 3KD8A 4ZG7A 4LRAA 4NWJA 3WAXA 2W5QA 5INHA 1ELZA 3DPCA 1EW8A 4UPKA 5IJQA 5KXAA 4UORA 5EGEA 4KM4A 3BDFA 1ED9A 4N7TA 1P49A 4QAXA 3T00A 1ZEBA 2W5WA 3LXQA 1AJAA 1AUKA 3B5QA 1KH9A 5L0BA 3NKMA 1Y7AA 5LQQA 1K7HA 1KH5A 2ZKTA 3CMRA 4CYSA 1Y6VA 1ALIA 3UN5A 3NKQA 3NKOA 3SZYA 3OT9A 4LQYA 5DLWA 3NKRA 2XR9A 3SZZA 4LRFA 1HJKA 3UN3A 3M8YA 4LRBA 4UPIA 2XRGA 4KJDA 4LR9A 4GTXA 5HRTA 2W5RA 1ED8A
chains in the Genus database with same CATH superfamily
1ELYA 3MK1A 4KAYA 2G9YA 3BDGA 3NVLA 3UNYA 2GSNA 3Q3QA 4TN0A 3TWZA 1E33P 4ZG6A 2GSUA 5EGHA 4LR2A 3TX0A 1EW2A 4LREA 3NKNA 1KHJA 5L0KA 4KJGA 2GLQA 3MK0A 5TJ3A 1KH4A 1ALHA 2W5TA 3IGZB 3TG0A 1KH7A 3ED4A 2IUCA 5LRMA 1EJJA 4MY4A 3M8ZA 2W8SA 4ZG9A 3BDGB 5IJSA 4FDIA 4CXUA 5K4PA 4ZGAA 1O99A 2D1GA 4LR8A 3M7VA 1SHNA 1E2SP 4CXSA 3UO0A 4LRCA 3WBHA 4KAVA 5L0EA 3MK2A 4UOPA 1EW9A 1EQJA 1HDHA 4MIVA 2GSOA 3A52A 3WAYA 5LIAA 1N2KA 3NKPA 2GA3A 1E1ZP 1KHLA 4YR1A 5C66A 2IUCB 2W8DA 1URAA 2QZUA 1URBA 1EI6A 1SHQA 4GTYA 3T02A 3WAVA 2VQRA 4FDJA 3DYCA 1AJBA 4MHXA 5GRRA 1FSUA 1KHNA 3UN2A 1ZEDA 2ANHA 3T01A 4CYRA 1ELXA 4UPHA 5AJ9A 5GOVA 1ALKA 3IDDA 1ZEFA 5DLVA 3BDHA 4B56A 2IFYA 5LRNA 1ALJA 2X98A 2RH6A 2W5SA 3E2DA 1N2LA 1AJCA 2W5VA 4CXKA 1ANIA 1HQAA 4GTZA 2W5XA 4LRDA 5DLTA 1KHKA 4NWXA 1E3CP 1B8JA 3M8WA 4LR7A 1O98A 1ANJA 3IGYB 3WAWA 1AJDA 4GTWA 4UOOA 4UPLA 3KD8A 4ZG7A 4LRAA 4NWJA 3WAXA 2W5QA 5INHA 1ELZA 3DPCA 1EW8A 4UPKA 5IJQA 5KXAA 4UORA 5EGEA 4KM4A 3BDFA 1ED9A 4N7TA 1P49A 4QAXA 3T00A 1ZEBA 2W5WA 3LXQA 1AJAA 1AUKA 3B5QA 1KH9A 5L0BA 3NKMA 1Y7AA 5LQQA 1K7HA 1KH5A 2ZKTA 3CMRA 4CYSA 1Y6VA 1ALIA 3UN5A 3NKQA 3NKOA 3SZYA 3OT9A 4LQYA 5DLWA 3NKRA 2XR9A 3SZZA 4LRFA 1HJKA 3UN3A 3M8YA 4LRBA 4UPIA 2XRGA 4KJDA 4LR9A 4GTXA 5HRTA 2W5RA 1ED8A
chains in the Genus database with same CATH topology
1ELYA 3MK1A 4KAYA 2G9YA 3BDGA 3NVLA 3UNYA 2GSNA 3Q3QA 4TN0A 3TWZA 1E33P 4ZG6A 2GSUA 5EGHA 4LR2A 3TX0A 1EW2A 4LREA 3NKNA 1KHJA 5L0KA 4KJGA 2GLQA 3MK0A 5TJ3A 1KH4A 1ALHA 2W5TA 3IGZB 3TG0A 1KH7A 3ED4A 2IUCA 5LRMA 1EJJA 4MY4A 3M8ZA 2W8SA 4ZG9A 3BDGB 5IJSA 4FDIA 4CXUA 5K4PA 4ZGAA 1O99A 2D1GA 4LR8A 3M7VA 1SHNA 1E2SP 4CXSA 3UO0A 4LRCA 3WBHA 4KAVA 5L0EA 3MK2A 4UOPA 1EW9A 1EQJA 1HDHA 4MIVA 2GSOA 3A52A 3WAYA 5LIAA 1N2KA 3NKPA 2GA3A 1E1ZP 1KHLA 4YR1A 5C66A 2IUCB 2W8DA 1URAA 2QZUA 1URBA 1EI6A 1SHQA 4GTYA 3T02A 3WAVA 2VQRA 4FDJA 3DYCA 1AJBA 4MHXA 5GRRA 1FSUA 1KHNA 3UN2A 1ZEDA 2ANHA 3T01A 4CYRA 1ELXA 4UPHA 5AJ9A 5GOVA 1ALKA 3IDDA 1ZEFA 5DLVA 3BDHA 4B56A 2IFYA 5LRNA 1ALJA 2X98A 2RH6A 2W5SA 3E2DA 1N2LA 1AJCA 2W5VA 4CXKA 1ANIA 1HQAA 4GTZA 2W5XA 4LRDA 5DLTA 1KHKA 4NWXA 1E3CP 1B8JA 3M8WA 4LR7A 1O98A 1ANJA 3IGYB 3WAWA 1AJDA 4GTWA 4UOOA 4UPLA 3KD8A 4ZG7A 4LRAA 4NWJA 3WAXA 2W5QA 5INHA 1ELZA 3DPCA 1EW8A 4UPKA 5IJQA 5KXAA 4UORA 5EGEA 4KM4A 3BDFA 1ED9A 4N7TA 1P49A 4QAXA 3T00A 1ZEBA 2W5WA 3LXQA 1AJAA 1AUKA 3B5QA 1KH9A 5L0BA 3NKMA 1Y7AA 5LQQA 1K7HA 1KH5A 2ZKTA 3CMRA 4CYSA 1Y6VA 1ALIA 3UN5A 3NKQA 3NKOA 3SZYA 3OT9A 4LQYA 5DLWA 3NKRA 2XR9A 3SZZA 4LRFA 1HJKA 3UN3A 3M8YA 4LRBA 4UPIA 2XRGA 4KJDA 4LR9A 4GTXA 5HRTA 2W5RA 1ED8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ELY A;  3MK1 A;  4KAY A;  2G9Y A;  3BDG A;  3NVL A;  3UNY A;  2GSN A;  3Q3Q A;  4TN0 A;  3TWZ A;  1E33 P;  4ZG6 A;  2GSU A;  5EGH A;  4LR2 A;  3TX0 A;  1EW2 A;  4LRE A;  3NKN A;  1KHJ A;  5L0K A;  4KJG A;  2GLQ A;  3MK0 A;  5TJ3 A;  1KH4 A;  1ALH A;  2W5T A;  3IGZ B;  3TG0 A;  1KH7 A;  3ED4 A;  2IUC A;  5LRM A;  1EJJ A;  4MY4 A;  3M8Z A;  2W8S A;  4ZG9 A;  3BDG B;  5IJS A;  4FDI A;  4CXU A;  5K4P A;  4ZGA A;  1O99 A;  2D1G A;  4LR8 A;  3M7V A;  1SHN A;  1E2S P;  4CXS A;  3UO0 A;  4LRC A;  3WBH A;  4KAV A;  5L0E A;  3MK2 A;  4UOP A;  1EW9 A;  1EQJ A;  1HDH A;  4MIV A;  2GSO A;  3A52 A;  3WAY A;  5LIA A;  1N2K A;  3NKP A;  2GA3 A;  1E1Z P;  1KHL A;  4YR1 A;  5C66 A;  2IUC B;  2W8D A;  1URA A;  2QZU A;  1URB A;  1EI6 A;  1SHQ A;  4GTY A;  3T02 A;  3WAV A;  2VQR A;  4FDJ A;  3DYC A;  1AJB A;  4MHX A;  5GRR A;  1FSU A;  1KHN A;  3UN2 A;  1ZED A;  2ANH A;  3T01 A;  4CYR A;  1ELX A;  4UPH A;  5AJ9 A;  5GOV A;  1ALK A;  3IDD A;  1ZEF A;  5DLV A;  3BDH A;  4B56 A;  2IFY A;  5LRN A;  1ALJ A;  2X98 A;  2RH6 A;  2W5S A;  3E2D A;  1N2L A;  1AJC A;  2W5V A;  4CXK A;  1ANI A;  1HQA A;  4GTZ A;  2W5X A;  4LRD A;  5DLT A;  1KHK A;  4NWX A;  1E3C P;  1B8J A;  3M8W A;  4LR7 A;  1O98 A;  1ANJ A;  3IGY B;  3WAW A;  1AJD A;  4GTW A;  4UOO A;  4UPL A;  3KD8 A;  4ZG7 A;  4LRA A;  4NWJ A;  3WAX A;  2W5Q A;  5INH A;  1ELZ A;  3DPC A;  1EW8 A;  4UPK A;  5IJQ A;  5KXA A;  4UOR A;  5EGE A;  4KM4 A;  3BDF A;  1ED9 A;  4N7T A;  1P49 A;  4QAX A;  3T00 A;  1ZEB A;  2W5W A;  3LXQ A;  1AJA A;  1AUK A;  3B5Q A;  1KH9 A;  5L0B A;  3NKM A;  1Y7A A;  5LQQ A;  1K7H A;  1KH5 A;  2ZKT A;  3CMR A;  4CYS A;  1Y6V A;  1ALI A;  3UN5 A;  3NKQ A;  3NKO A;  3SZY A;  3OT9 A;  4LQY A;  5DLW A;  3NKR A;  2XR9 A;  3SZZ A;  4LRF A;  1HJK A;  3UN3 A;  3M8Y A;  4LRB A;  4UPI A;  2XRG A;  4KJD A;  4LR9 A;  4GTX A;  5HRT A;  2W5R A;  1ED8 A; 
#chains in the Genus database with same CATH topology
 1ELY A;  3MK1 A;  4KAY A;  2G9Y A;  3BDG A;  3NVL A;  3UNY A;  2GSN A;  3Q3Q A;  4TN0 A;  3TWZ A;  1E33 P;  4ZG6 A;  2GSU A;  5EGH A;  4LR2 A;  3TX0 A;  1EW2 A;  4LRE A;  3NKN A;  1KHJ A;  5L0K A;  4KJG A;  2GLQ A;  3MK0 A;  5TJ3 A;  1KH4 A;  1ALH A;  2W5T A;  3IGZ B;  3TG0 A;  1KH7 A;  3ED4 A;  2IUC A;  5LRM A;  1EJJ A;  4MY4 A;  3M8Z A;  2W8S A;  4ZG9 A;  3BDG B;  5IJS A;  4FDI A;  4CXU A;  5K4P A;  4ZGA A;  1O99 A;  2D1G A;  4LR8 A;  3M7V A;  1SHN A;  1E2S P;  4CXS A;  3UO0 A;  4LRC A;  3WBH A;  4KAV A;  5L0E A;  3MK2 A;  4UOP A;  1EW9 A;  1EQJ A;  1HDH A;  4MIV A;  2GSO A;  3A52 A;  3WAY A;  5LIA A;  1N2K A;  3NKP A;  2GA3 A;  1E1Z P;  1KHL A;  4YR1 A;  5C66 A;  2IUC B;  2W8D A;  1URA A;  2QZU A;  1URB A;  1EI6 A;  1SHQ A;  4GTY A;  3T02 A;  3WAV A;  2VQR A;  4FDJ A;  3DYC A;  1AJB A;  4MHX A;  5GRR A;  1FSU A;  1KHN A;  3UN2 A;  1ZED A;  2ANH A;  3T01 A;  4CYR A;  1ELX A;  4UPH A;  5AJ9 A;  5GOV A;  1ALK A;  3IDD A;  1ZEF A;  5DLV A;  3BDH A;  4B56 A;  2IFY A;  5LRN A;  1ALJ A;  2X98 A;  2RH6 A;  2W5S A;  3E2D A;  1N2L A;  1AJC A;  2W5V A;  4CXK A;  1ANI A;  1HQA A;  4GTZ A;  2W5X A;  4LRD A;  5DLT A;  1KHK A;  4NWX A;  1E3C P;  1B8J A;  3M8W A;  4LR7 A;  1O98 A;  1ANJ A;  3IGY B;  3WAW A;  1AJD A;  4GTW A;  4UOO A;  4UPL A;  3KD8 A;  4ZG7 A;  4LRA A;  4NWJ A;  3WAX A;  2W5Q A;  5INH A;  1ELZ A;  3DPC A;  1EW8 A;  4UPK A;  5IJQ A;  5KXA A;  4UOR A;  5EGE A;  4KM4 A;  3BDF A;  1ED9 A;  4N7T A;  1P49 A;  4QAX A;  3T00 A;  1ZEB A;  2W5W A;  3LXQ A;  1AJA A;  1AUK A;  3B5Q A;  1KH9 A;  5L0B A;  3NKM A;  1Y7A A;  5LQQ A;  1K7H A;  1KH5 A;  2ZKT A;  3CMR A;  4CYS A;  1Y6V A;  1ALI A;  3UN5 A;  3NKQ A;  3NKO A;  3SZY A;  3OT9 A;  4LQY A;  5DLW A;  3NKR A;  2XR9 A;  3SZZ A;  4LRF A;  1HJK A;  3UN3 A;  3M8Y A;  4LRB A;  4UPI A;  2XRG A;  4KJD A;  4LR9 A;  4GTX A;  5HRT A;  2W5R A;  1ED8 A; 
#chains in the Genus database with same CATH homology
 1ELY A;  3MK1 A;  4KAY A;  2G9Y A;  3BDG A;  3NVL A;  3UNY A;  2GSN A;  3Q3Q A;  4TN0 A;  3TWZ A;  1E33 P;  4ZG6 A;  2GSU A;  5EGH A;  4LR2 A;  3TX0 A;  1EW2 A;  4LRE A;  3NKN A;  1KHJ A;  5L0K A;  4KJG A;  2GLQ A;  3MK0 A;  5TJ3 A;  1KH4 A;  1ALH A;  2W5T A;  3IGZ B;  3TG0 A;  1KH7 A;  3ED4 A;  2IUC A;  5LRM A;  1EJJ A;  4MY4 A;  3M8Z A;  2W8S A;  4ZG9 A;  3BDG B;  5IJS A;  4FDI A;  4CXU A;  5K4P A;  4ZGA A;  1O99 A;  2D1G A;  4LR8 A;  3M7V A;  1SHN A;  1E2S P;  4CXS A;  3UO0 A;  4LRC A;  3WBH A;  4KAV A;  5L0E A;  3MK2 A;  4UOP A;  1EW9 A;  1EQJ A;  1HDH A;  4MIV A;  2GSO A;  3A52 A;  3WAY A;  5LIA A;  1N2K A;  3NKP A;  2GA3 A;  1E1Z P;  1KHL A;  4YR1 A;  5C66 A;  2IUC B;  2W8D A;  1URA A;  2QZU A;  1URB A;  1EI6 A;  1SHQ A;  4GTY A;  3T02 A;  3WAV A;  2VQR A;  4FDJ A;  3DYC A;  1AJB A;  4MHX A;  5GRR A;  1FSU A;  1KHN A;  3UN2 A;  1ZED A;  2ANH A;  3T01 A;  4CYR A;  1ELX A;  4UPH A;  5AJ9 A;  5GOV A;  1ALK A;  3IDD A;  1ZEF A;  5DLV A;  3BDH A;  4B56 A;  2IFY A;  5LRN A;  1ALJ A;  2X98 A;  2RH6 A;  2W5S A;  3E2D A;  1N2L A;  1AJC A;  2W5V A;  4CXK A;  1ANI A;  1HQA A;  4GTZ A;  2W5X A;  4LRD A;  5DLT A;  1KHK A;  4NWX A;  1E3C P;  1B8J A;  3M8W A;  4LR7 A;  1O98 A;  1ANJ A;  3IGY B;  3WAW A;  1AJD A;  4GTW A;  4UOO A;  4UPL A;  3KD8 A;  4ZG7 A;  4LRA A;  4NWJ A;  3WAX A;  2W5Q A;  5INH A;  1ELZ A;  3DPC A;  1EW8 A;  4UPK A;  5IJQ A;  5KXA A;  4UOR A;  5EGE A;  4KM4 A;  3BDF A;  1ED9 A;  4N7T A;  1P49 A;  4QAX A;  3T00 A;  1ZEB A;  2W5W A;  3LXQ A;  1AJA A;  1AUK A;  3B5Q A;  1KH9 A;  5L0B A;  3NKM A;  1Y7A A;  5LQQ A;  1K7H A;  1KH5 A;  2ZKT A;  3CMR A;  4CYS A;  1Y6V A;  1ALI A;  3UN5 A;  3NKQ A;  3NKO A;  3SZY A;  3OT9 A;  4LQY A;  5DLW A;  3NKR A;  2XR9 A;  3SZZ A;  4LRF A;  1HJK A;  3UN3 A;  3M8Y A;  4LRB A;  4UPI A;  2XRG A;  4KJD A;  4LR9 A;  4GTX A;  5HRT A;  2W5R A;  1ED8 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...