4TN0A

Crystal structure of the c-terminal periplasmic domain of phosphoethanolamine transferase eptc from campylobacter jejuni
Total Genus 121
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
121
Knots found
sequence length
311
structure length
307
Chain Sequence
MFKTIANDAYRHTKKLLVLVVGETARAANYSLGGYTKNDTNFYTKKDNVVFFDNFSSCGTAAVSLPCMFSISKRENYSSSEFQENAMDVLYKTGVDAAWFDNNSGGCKGVCDRLAYKQKLSSDLDENLLIPFKEKLNHLSDQNIIVLHLQGSHGPTYYKRYPSEFKKFTPTCDTNELSKCDSEALINTYDNTLLYTDYLLSEIIKLLKEQKSYESSLFYLSDHGESLGENGIYLHGMPYAIAPSYQTHIPAIFWSNDEKLMNLAKEHKGLKLSQDNLFSTLLGYFNVKTSVYEPEYDLLNPKLKANP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystallographic study of the phosphoethanolamine transferase EptC required for polymyxin resistance and motility in Campylobacter jejuni.
pubmed doi rcsb
source organism Campylobacter jejuni subsp. jejuni hb93-13
molecule tags Transferase
molecule keywords UPF0141 protein yjdB
total genus 121
structure length 307
sequence length 311
chains with identical sequence B, C
other databases KnotProt 2.0: S +31
ec nomenclature
pdb deposition date 2014-06-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 4tn0A00
1EW9A 4MIVA 2W5WA 4NWXA 5GRRA 1E33P 2GSNA 1AJBA 1KH5A 2W5VA 4LR8A 4UORA 1HJKA 1FSUA 4KJGA 1EI6A 2GSOA 1ALKA 2QZUA 3SZZA 3IDDA 4N7TA 1ANIA 1ALHA 4LR7A 1ZEFA 3TG0A 3CMRA 5AJ9A 3T00A 5HRTA 5DLTA 3WAYA 3MK0A 1ZEBA 1E1ZP 2IFYA 2W5XA 2ZKTA 4KAYA 4GTYA 1KH4A 3WBHA 4LR2A 4GTWA 3NKQA 3T02A 1URAA 4KJDA 3M8ZA 5DLVA 1AJDA 4LRBA 2XR9A 3M7VA 1ELZA 3ED4A 4B56A 4UPLA 3A52A 2D1GA 3BDFA 5IJQA 3M8WA 1KHKA 5GOVA 4YR1A 1Y6VA 1EW8A 3UN2A 1EJJA 1ED8A 1SHNA 1E2SP 4LRFA 3WAWA 1KHNA 1URBA 5INHA 2GLQA 4LRDA 5L0BA 4UOOA 3NKPA 3UO0A 3NKRA 2VQRA 4UPKA 5LRMA 2X98A 5L0EA 4UOPA 5IJSA 4KAVA 1HDHA 4QAXA 3NKNA 4ZG6A 3BDGB 4ZG7A 1O99A 1ZEDA 1ELYA 4LRAA 1KHLA 1AJAA 1EW2A 4UPIA 4LREA 4GTZA 3WAXA 4NWJA 3TX0A 4FDIA 1HQAA 1ELXA 2W8DA 4ZG9A 5LIAA 1N2KA 1KHJA 1KH9A 2W5QA 3KD8A 4MY4A 3LXQA 5DLWA 1KH7A 3SZYA 1P49A 4GTXA 2ANHA 5LQQA 2IUCA 5L0KA 3UNYA 1B8JA 1EQJA 2RH6A 3NKOA 4ZGAA 4CYRA 3NKMA 1ALIA 2G9YA 5KXAA 2W5SA 3T01A 3IGZB 3BDGA 1O98A 4MHXA 3WAVA 5EGEA 5LRNA 4CYSA 1AUKA 4TN0A 2W8SA 4KM4A 4UPHA 3E2DA 3MK2A 3BDHA 4LQYA 1ALJA 2W5RA 2W5TA 5TJ3A 1AJCA 3MK1A 2GA3A 1Y7AA 3OT9A 1K7HA 3IGYB 4FDJA 1ANJA 5K4PA 4CXSA 3TWZA 5EGHA 1N2LA 1SHQA 2GSUA 3UN5A 4CXUA 4LR9A 5C66A 4LRCA 3Q3QA 3B5QA 3NVLA 3M8YA 4CXKA 2XRGA 3DPCA 3DYCA 2IUCB 1E3CP 3UN3A 1ED9A
chains in the Genus database with same CATH superfamily
1EW9A 4MIVA 2W5WA 4NWXA 5GRRA 1E33P 2GSNA 1AJBA 1KH5A 2W5VA 4LR8A 4UORA 1HJKA 1FSUA 4KJGA 1EI6A 2GSOA 1ALKA 2QZUA 3SZZA 3IDDA 4N7TA 1ANIA 1ALHA 4LR7A 1ZEFA 3TG0A 3CMRA 5AJ9A 3T00A 5HRTA 5DLTA 3WAYA 3MK0A 1ZEBA 1E1ZP 2IFYA 2W5XA 2ZKTA 4KAYA 4GTYA 1KH4A 3WBHA 4LR2A 4GTWA 3NKQA 3T02A 1URAA 4KJDA 3M8ZA 5DLVA 1AJDA 4LRBA 2XR9A 3M7VA 1ELZA 3ED4A 4B56A 4UPLA 3A52A 2D1GA 3BDFA 5IJQA 3M8WA 1KHKA 5GOVA 4YR1A 1Y6VA 1EW8A 3UN2A 1EJJA 1ED8A 1SHNA 1E2SP 4LRFA 3WAWA 1KHNA 1URBA 5INHA 2GLQA 4LRDA 5L0BA 4UOOA 3NKPA 3UO0A 3NKRA 2VQRA 4UPKA 5LRMA 2X98A 5L0EA 4UOPA 5IJSA 4KAVA 1HDHA 4QAXA 3NKNA 4ZG6A 3BDGB 4ZG7A 1O99A 1ZEDA 1ELYA 4LRAA 1KHLA 1AJAA 1EW2A 4UPIA 4LREA 4GTZA 3WAXA 4NWJA 3TX0A 4FDIA 1HQAA 1ELXA 2W8DA 4ZG9A 5LIAA 1N2KA 1KHJA 1KH9A 2W5QA 3KD8A 4MY4A 3LXQA 5DLWA 1KH7A 3SZYA 1P49A 4GTXA 2ANHA 5LQQA 2IUCA 5L0KA 3UNYA 1B8JA 1EQJA 2RH6A 3NKOA 4ZGAA 4CYRA 3NKMA 1ALIA 2G9YA 5KXAA 2W5SA 3T01A 3IGZB 3BDGA 1O98A 4MHXA 3WAVA 5EGEA 5LRNA 4CYSA 1AUKA 4TN0A 2W8SA 4KM4A 4UPHA 3E2DA 3MK2A 3BDHA 4LQYA 1ALJA 2W5RA 2W5TA 5TJ3A 1AJCA 3MK1A 2GA3A 1Y7AA 3OT9A 1K7HA 3IGYB 4FDJA 1ANJA 5K4PA 4CXSA 3TWZA 5EGHA 1N2LA 1SHQA 2GSUA 3UN5A 4CXUA 4LR9A 5C66A 4LRCA 3Q3QA 3B5QA 3NVLA 3M8YA 4CXKA 2XRGA 3DPCA 3DYCA 2IUCB 1E3CP 3UN3A 1ED9A
chains in the Genus database with same CATH topology
1EW9A 4MIVA 2W5WA 4NWXA 5GRRA 1E33P 2GSNA 1AJBA 1KH5A 2W5VA 4LR8A 4UORA 1HJKA 1FSUA 4KJGA 1EI6A 2GSOA 1ALKA 2QZUA 3SZZA 3IDDA 4N7TA 1ANIA 1ALHA 4LR7A 1ZEFA 3TG0A 3CMRA 5AJ9A 3T00A 5HRTA 5DLTA 3WAYA 3MK0A 1ZEBA 1E1ZP 2IFYA 2W5XA 2ZKTA 4KAYA 4GTYA 1KH4A 3WBHA 4LR2A 4GTWA 3NKQA 3T02A 1URAA 4KJDA 3M8ZA 5DLVA 1AJDA 4LRBA 2XR9A 3M7VA 1ELZA 3ED4A 4B56A 4UPLA 3A52A 2D1GA 3BDFA 5IJQA 3M8WA 1KHKA 5GOVA 4YR1A 1Y6VA 1EW8A 3UN2A 1EJJA 1ED8A 1SHNA 1E2SP 4LRFA 3WAWA 1KHNA 1URBA 5INHA 2GLQA 4LRDA 5L0BA 4UOOA 3NKPA 3UO0A 3NKRA 2VQRA 4UPKA 5LRMA 2X98A 5L0EA 4UOPA 5IJSA 4KAVA 1HDHA 4QAXA 3NKNA 4ZG6A 3BDGB 4ZG7A 1O99A 1ZEDA 1ELYA 4LRAA 1KHLA 1AJAA 1EW2A 4UPIA 4LREA 4GTZA 3WAXA 4NWJA 3TX0A 4FDIA 1HQAA 1ELXA 2W8DA 4ZG9A 5LIAA 1N2KA 1KHJA 1KH9A 2W5QA 3KD8A 4MY4A 3LXQA 5DLWA 1KH7A 3SZYA 1P49A 4GTXA 2ANHA 5LQQA 2IUCA 5L0KA 3UNYA 1B8JA 1EQJA 2RH6A 3NKOA 4ZGAA 4CYRA 3NKMA 1ALIA 2G9YA 5KXAA 2W5SA 3T01A 3IGZB 3BDGA 1O98A 4MHXA 3WAVA 5EGEA 5LRNA 4CYSA 1AUKA 4TN0A 2W8SA 4KM4A 4UPHA 3E2DA 3MK2A 3BDHA 4LQYA 1ALJA 2W5RA 2W5TA 5TJ3A 1AJCA 3MK1A 2GA3A 1Y7AA 3OT9A 1K7HA 3IGYB 4FDJA 1ANJA 5K4PA 4CXSA 3TWZA 5EGHA 1N2LA 1SHQA 2GSUA 3UN5A 4CXUA 4LR9A 5C66A 4LRCA 3Q3QA 3B5QA 3NVLA 3M8YA 4CXKA 2XRGA 3DPCA 3DYCA 2IUCB 1E3CP 3UN3A 1ED9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1EW9 A;  4MIV A;  2W5W A;  4NWX A;  5GRR A;  1E33 P;  2GSN A;  1AJB A;  1KH5 A;  2W5V A;  4LR8 A;  4UOR A;  1HJK A;  1FSU A;  4KJG A;  1EI6 A;  2GSO A;  1ALK A;  2QZU A;  3SZZ A;  3IDD A;  4N7T A;  1ANI A;  1ALH A;  4LR7 A;  1ZEF A;  3TG0 A;  3CMR A;  5AJ9 A;  3T00 A;  5HRT A;  5DLT A;  3WAY A;  3MK0 A;  1ZEB A;  1E1Z P;  2IFY A;  2W5X A;  2ZKT A;  4KAY A;  4GTY A;  1KH4 A;  3WBH A;  4LR2 A;  4GTW A;  3NKQ A;  3T02 A;  1URA A;  4KJD A;  3M8Z A;  5DLV A;  1AJD A;  4LRB A;  2XR9 A;  3M7V A;  1ELZ A;  3ED4 A;  4B56 A;  4UPL A;  3A52 A;  2D1G A;  3BDF A;  5IJQ A;  3M8W A;  1KHK A;  5GOV A;  4YR1 A;  1Y6V A;  1EW8 A;  3UN2 A;  1EJJ A;  1ED8 A;  1SHN A;  1E2S P;  4LRF A;  3WAW A;  1KHN A;  1URB A;  5INH A;  2GLQ A;  4LRD A;  5L0B A;  4UOO A;  3NKP A;  3UO0 A;  3NKR A;  2VQR A;  4UPK A;  5LRM A;  2X98 A;  5L0E A;  4UOP A;  5IJS A;  4KAV A;  1HDH A;  4QAX A;  3NKN A;  4ZG6 A;  3BDG B;  4ZG7 A;  1O99 A;  1ZED A;  1ELY A;  4LRA A;  1KHL A;  1AJA A;  1EW2 A;  4UPI A;  4LRE A;  4GTZ A;  3WAX A;  4NWJ A;  3TX0 A;  4FDI A;  1HQA A;  1ELX A;  2W8D A;  4ZG9 A;  5LIA A;  1N2K A;  1KHJ A;  1KH9 A;  2W5Q A;  3KD8 A;  4MY4 A;  3LXQ A;  5DLW A;  1KH7 A;  3SZY A;  1P49 A;  4GTX A;  2ANH A;  5LQQ A;  2IUC A;  5L0K A;  3UNY A;  1B8J A;  1EQJ A;  2RH6 A;  3NKO A;  4ZGA A;  4CYR A;  3NKM A;  1ALI A;  2G9Y A;  5KXA A;  2W5S A;  3T01 A;  3IGZ B;  3BDG A;  1O98 A;  4MHX A;  3WAV A;  5EGE A;  5LRN A;  4CYS A;  1AUK A;  4TN0 A;  2W8S A;  4KM4 A;  4UPH A;  3E2D A;  3MK2 A;  3BDH A;  4LQY A;  1ALJ A;  2W5R A;  2W5T A;  5TJ3 A;  1AJC A;  3MK1 A;  2GA3 A;  1Y7A A;  3OT9 A;  1K7H A;  3IGY B;  4FDJ A;  1ANJ A;  5K4P A;  4CXS A;  3TWZ A;  5EGH A;  1N2L A;  1SHQ A;  2GSU A;  3UN5 A;  4CXU A;  4LR9 A;  5C66 A;  4LRC A;  3Q3Q A;  3B5Q A;  3NVL A;  3M8Y A;  4CXK A;  2XRG A;  3DPC A;  3DYC A;  2IUC B;  1E3C P;  3UN3 A;  1ED9 A; 
#chains in the Genus database with same CATH topology
 1EW9 A;  4MIV A;  2W5W A;  4NWX A;  5GRR A;  1E33 P;  2GSN A;  1AJB A;  1KH5 A;  2W5V A;  4LR8 A;  4UOR A;  1HJK A;  1FSU A;  4KJG A;  1EI6 A;  2GSO A;  1ALK A;  2QZU A;  3SZZ A;  3IDD A;  4N7T A;  1ANI A;  1ALH A;  4LR7 A;  1ZEF A;  3TG0 A;  3CMR A;  5AJ9 A;  3T00 A;  5HRT A;  5DLT A;  3WAY A;  3MK0 A;  1ZEB A;  1E1Z P;  2IFY A;  2W5X A;  2ZKT A;  4KAY A;  4GTY A;  1KH4 A;  3WBH A;  4LR2 A;  4GTW A;  3NKQ A;  3T02 A;  1URA A;  4KJD A;  3M8Z A;  5DLV A;  1AJD A;  4LRB A;  2XR9 A;  3M7V A;  1ELZ A;  3ED4 A;  4B56 A;  4UPL A;  3A52 A;  2D1G A;  3BDF A;  5IJQ A;  3M8W A;  1KHK A;  5GOV A;  4YR1 A;  1Y6V A;  1EW8 A;  3UN2 A;  1EJJ A;  1ED8 A;  1SHN A;  1E2S P;  4LRF A;  3WAW A;  1KHN A;  1URB A;  5INH A;  2GLQ A;  4LRD A;  5L0B A;  4UOO A;  3NKP A;  3UO0 A;  3NKR A;  2VQR A;  4UPK A;  5LRM A;  2X98 A;  5L0E A;  4UOP A;  5IJS A;  4KAV A;  1HDH A;  4QAX A;  3NKN A;  4ZG6 A;  3BDG B;  4ZG7 A;  1O99 A;  1ZED A;  1ELY A;  4LRA A;  1KHL A;  1AJA A;  1EW2 A;  4UPI A;  4LRE A;  4GTZ A;  3WAX A;  4NWJ A;  3TX0 A;  4FDI A;  1HQA A;  1ELX A;  2W8D A;  4ZG9 A;  5LIA A;  1N2K A;  1KHJ A;  1KH9 A;  2W5Q A;  3KD8 A;  4MY4 A;  3LXQ A;  5DLW A;  1KH7 A;  3SZY A;  1P49 A;  4GTX A;  2ANH A;  5LQQ A;  2IUC A;  5L0K A;  3UNY A;  1B8J A;  1EQJ A;  2RH6 A;  3NKO A;  4ZGA A;  4CYR A;  3NKM A;  1ALI A;  2G9Y A;  5KXA A;  2W5S A;  3T01 A;  3IGZ B;  3BDG A;  1O98 A;  4MHX A;  3WAV A;  5EGE A;  5LRN A;  4CYS A;  1AUK A;  4TN0 A;  2W8S A;  4KM4 A;  4UPH A;  3E2D A;  3MK2 A;  3BDH A;  4LQY A;  1ALJ A;  2W5R A;  2W5T A;  5TJ3 A;  1AJC A;  3MK1 A;  2GA3 A;  1Y7A A;  3OT9 A;  1K7H A;  3IGY B;  4FDJ A;  1ANJ A;  5K4P A;  4CXS A;  3TWZ A;  5EGH A;  1N2L A;  1SHQ A;  2GSU A;  3UN5 A;  4CXU A;  4LR9 A;  5C66 A;  4LRC A;  3Q3Q A;  3B5Q A;  3NVL A;  3M8Y A;  4CXK A;  2XRG A;  3DPC A;  3DYC A;  2IUC B;  1E3C P;  3UN3 A;  1ED9 A; 
#chains in the Genus database with same CATH homology
 1EW9 A;  4MIV A;  2W5W A;  4NWX A;  5GRR A;  1E33 P;  2GSN A;  1AJB A;  1KH5 A;  2W5V A;  4LR8 A;  4UOR A;  1HJK A;  1FSU A;  4KJG A;  1EI6 A;  2GSO A;  1ALK A;  2QZU A;  3SZZ A;  3IDD A;  4N7T A;  1ANI A;  1ALH A;  4LR7 A;  1ZEF A;  3TG0 A;  3CMR A;  5AJ9 A;  3T00 A;  5HRT A;  5DLT A;  3WAY A;  3MK0 A;  1ZEB A;  1E1Z P;  2IFY A;  2W5X A;  2ZKT A;  4KAY A;  4GTY A;  1KH4 A;  3WBH A;  4LR2 A;  4GTW A;  3NKQ A;  3T02 A;  1URA A;  4KJD A;  3M8Z A;  5DLV A;  1AJD A;  4LRB A;  2XR9 A;  3M7V A;  1ELZ A;  3ED4 A;  4B56 A;  4UPL A;  3A52 A;  2D1G A;  3BDF A;  5IJQ A;  3M8W A;  1KHK A;  5GOV A;  4YR1 A;  1Y6V A;  1EW8 A;  3UN2 A;  1EJJ A;  1ED8 A;  1SHN A;  1E2S P;  4LRF A;  3WAW A;  1KHN A;  1URB A;  5INH A;  2GLQ A;  4LRD A;  5L0B A;  4UOO A;  3NKP A;  3UO0 A;  3NKR A;  2VQR A;  4UPK A;  5LRM A;  2X98 A;  5L0E A;  4UOP A;  5IJS A;  4KAV A;  1HDH A;  4QAX A;  3NKN A;  4ZG6 A;  3BDG B;  4ZG7 A;  1O99 A;  1ZED A;  1ELY A;  4LRA A;  1KHL A;  1AJA A;  1EW2 A;  4UPI A;  4LRE A;  4GTZ A;  3WAX A;  4NWJ A;  3TX0 A;  4FDI A;  1HQA A;  1ELX A;  2W8D A;  4ZG9 A;  5LIA A;  1N2K A;  1KHJ A;  1KH9 A;  2W5Q A;  3KD8 A;  4MY4 A;  3LXQ A;  5DLW A;  1KH7 A;  3SZY A;  1P49 A;  4GTX A;  2ANH A;  5LQQ A;  2IUC A;  5L0K A;  3UNY A;  1B8J A;  1EQJ A;  2RH6 A;  3NKO A;  4ZGA A;  4CYR A;  3NKM A;  1ALI A;  2G9Y A;  5KXA A;  2W5S A;  3T01 A;  3IGZ B;  3BDG A;  1O98 A;  4MHX A;  3WAV A;  5EGE A;  5LRN A;  4CYS A;  1AUK A;  4TN0 A;  2W8S A;  4KM4 A;  4UPH A;  3E2D A;  3MK2 A;  3BDH A;  4LQY A;  1ALJ A;  2W5R A;  2W5T A;  5TJ3 A;  1AJC A;  3MK1 A;  2GA3 A;  1Y7A A;  3OT9 A;  1K7H A;  3IGY B;  4FDJ A;  1ANJ A;  5K4P A;  4CXS A;  3TWZ A;  5EGH A;  1N2L A;  1SHQ A;  2GSU A;  3UN5 A;  4CXU A;  4LR9 A;  5C66 A;  4LRC A;  3Q3Q A;  3B5Q A;  3NVL A;  3M8Y A;  4CXK A;  2XRG A;  3DPC A;  3DYC A;  2IUC B;  1E3C P;  3UN3 A;  1ED9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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