2IFYA

Structure of bacillus anthracis cofactor-independent phosphoglucerate mutase
Total Genus 156
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
156
Knots found
sequence length
508
structure length
508
Chain Sequence
RKPTALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHTTLTACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKETGVGQFATISGRYYSMDRDKRWDRVEKCYRAMVNGEGPTYKSAEECVEDSYANGIYDEFVLPSVIVNEDNTPVATINDDDAVIFYNFRPDRAIQIARVFTNGDFREFDRGEKVPHIPEFVCMTHFSETVDGYVAFKPMNLDNTLGEVVAQAGLKQLRIAETEKYPHVTFFFSGGREAEFPGEERILINSPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADEELTSEGEPMTAHTTNPVPFIVTKNDVELREDGILGDIAPTMLTLLGVEQPKEMTGKTIIK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
publication title Structure and Molecular Mechanism of Bacillus anthracis Cofactor-Independent Phosphoglycerate Mutase: A Crucial Enzyme for Spores and Growing Cells of Bacillus Species.
pubmed doi rcsb
source organism Bacillus anthracis
molecule tags Isomerase
total genus 156
structure length 508
sequence length 508
other databases KnotProt 2.0: S +31
ec nomenclature ec 5.4.2.12: Phosphoglycerate mutase (2,3-diphosphoglycerate-independent).
pdb deposition date 2006-09-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01676 Metalloenzyme Metalloenzyme superfamily
A PF06415 iPGM_N BPG-independent PGAM N-terminus (iPGM_N)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 2ifyA01
3.40.1450.10 Alpha Beta 3-Layer(aba) Sandwich 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain BPG-independent phosphoglycerate mutase, domain B 2ifyA02
1ELXA 2W5TA 4CXSA 1ANJA 2ZKTA 3UN2A 4MHXA 3UNYA 3T01A 4B56A 5GRRA 4LR9A 3LXQA 4UOOA 2W8SA 4GTWA 1N2LA 3NKNA 4N7TA 5IJQA 3T00A 4UPHA 1AJDA 1K7HA 4LR8A 3WAWA 3TWZA 1ELYA 1KHKA 1KHLA 2W5XA 4ZGAA 5LRMA 5TJ3A 4YR1A 1Y6VA 5EGEA 1E1ZP 1N2KA 2GSUA 1E3CP 3MK0A 4FDJA 4GTYA 4TN0A 3M8YA 2GA3A 4LR7A 5DLWA 3IGYB 1ALIA 1AJAA 3NKPA 4LQYA 4LRBA 3WBHA 1URAA 4NWXA 4NWJA 3E2DA 1AUKA 1E33P 3BDHA 4UPLA 1EW8A 5LRNA 3B5QA 5KXAA 5EGHA 2XR9A 4LRDA 4QAXA 2IUCA 1ALKA 4LREA 3TG0A 1ELZA 4GTXA 1O98A 5LIAA 2GLQA 5LQQA 3BDFA 1ALHA 5L0EA 4LRCA 1ZEFA 1KH5A 1EJJA 2W5SA 4FDIA 3BDGB 5DLVA 2W5QA 1KH4A 2GSOA 1EI6A 3Q3QA 2VQRA 5HRTA 1HJKA 3KD8A 5INHA 3SZZA 3NKRA 5L0KA 1ANIA 3UO0A 4KAVA 5DLTA 1ED9A 1ALJA 5IJSA 1KHJA 2QZUA 3T02A 4UPKA 2W8DA 5AJ9A 5L0BA 4UORA 1HQAA 4UPIA 2W5RA 1SHQA 3NKQA 3NKMA 1B8JA 1FSUA 4ZG6A 1SHNA 2RH6A 2GSNA 1O99A 1HDHA 2D1GA 3UN3A 1AJBA 3IDDA 4KAYA 3M8WA 4CYRA 3BDGA 3OT9A 4KM4A 3NKOA 4CXKA 4MY4A 2X98A 4KJDA 1Y7AA 3MK2A 4LRAA 4GTZA 3MK1A 2ANHA 2IUCB 1E2SP 3DYCA 3A52A 4LRFA 4CXUA 5C66A 2XRGA 3WAXA 3DPCA 4CYSA 4KJGA 3NVLA 2IFYA 4LR2A 3M8ZA 4MIVA 1EW9A 1ZEDA 3ED4A 3CMRA 3WAYA 3IGZB 1KH7A 1KH9A 5GOVA 1P49A 1AJCA 1URBA 5K4PA 3WAVA 2W5VA 3UN5A 1ZEBA 4UOPA 3SZYA 2W5WA 3M7VA 4ZG9A 3TX0A 4ZG7A 1KHNA 1EW2A 1ED8A 1EQJA 2G9YA
chains in the Genus database with same CATH superfamily
1ELXA 2W5TA 4CXSA 1ANJA 2ZKTA 3UN2A 4MHXA 3UNYA 3T01A 4B56A 5GRRA 4LR9A 3LXQA 4UOOA 2W8SA 4GTWA 1N2LA 3NKNA 4N7TA 5IJQA 3T00A 4UPHA 1AJDA 1K7HA 4LR8A 3WAWA 3TWZA 1ELYA 1KHKA 1KHLA 2W5XA 4ZGAA 5LRMA 5TJ3A 4YR1A 1Y6VA 5EGEA 1E1ZP 1N2KA 2GSUA 1E3CP 3MK0A 4FDJA 4GTYA 4TN0A 3M8YA 2GA3A 4LR7A 5DLWA 3IGYB 1ALIA 1AJAA 3NKPA 4LQYA 4LRBA 3WBHA 1URAA 4NWXA 4NWJA 3E2DA 1AUKA 1E33P 3BDHA 4UPLA 1EW8A 5LRNA 3B5QA 5KXAA 5EGHA 2XR9A 4LRDA 4QAXA 2IUCA 1ALKA 4LREA 3TG0A 1ELZA 4GTXA 1O98A 5LIAA 2GLQA 5LQQA 3BDFA 1ALHA 5L0EA 4LRCA 1ZEFA 1KH5A 1EJJA 2W5SA 4FDIA 3BDGB 5DLVA 2W5QA 1KH4A 2GSOA 1EI6A 3Q3QA 2VQRA 5HRTA 1HJKA 3KD8A 5INHA 3SZZA 3NKRA 5L0KA 1ANIA 3UO0A 4KAVA 5DLTA 1ED9A 1ALJA 5IJSA 1KHJA 2QZUA 3T02A 4UPKA 2W8DA 5AJ9A 5L0BA 4UORA 1HQAA 4UPIA 2W5RA 1SHQA 3NKQA 3NKMA 1B8JA 1FSUA 4ZG6A 1SHNA 2RH6A 2GSNA 1O99A 1HDHA 2D1GA 3UN3A 1AJBA 3IDDA 4KAYA 3M8WA 4CYRA 3BDGA 3OT9A 4KM4A 3NKOA 4CXKA 4MY4A 2X98A 4KJDA 1Y7AA 3MK2A 4LRAA 4GTZA 3MK1A 2ANHA 2IUCB 1E2SP 3DYCA 3A52A 4LRFA 4CXUA 5C66A 2XRGA 3WAXA 3DPCA 4CYSA 4KJGA 3NVLA 2IFYA 4LR2A 3M8ZA 4MIVA 1EW9A 1ZEDA 3ED4A 3CMRA 3WAYA 3IGZB 1KH7A 1KH9A 5GOVA 1P49A 1AJCA 1URBA 5K4PA 3WAVA 2W5VA 3UN5A 1ZEBA 4UOPA 3SZYA 2W5WA 3M7VA 4ZG9A 3TX0A 4ZG7A 1KHNA 1EW2A 1ED8A 1EQJA 2G9YA
chains in the Genus database with same CATH topology
1ELXA 2W5TA 4CXSA 1ANJA 2ZKTA 3UN2A 4MHXA 3UNYA 3T01A 4B56A 5GRRA 4LR9A 3LXQA 4UOOA 2W8SA 4GTWA 1N2LA 3NKNA 4N7TA 5IJQA 3T00A 4UPHA 1AJDA 1K7HA 4LR8A 3WAWA 3TWZA 1ELYA 1KHKA 1KHLA 2W5XA 4ZGAA 5LRMA 5TJ3A 4YR1A 1Y6VA 5EGEA 1E1ZP 1N2KA 2GSUA 1E3CP 3MK0A 4FDJA 4GTYA 4TN0A 3M8YA 2GA3A 4LR7A 5DLWA 3IGYB 1ALIA 1AJAA 3NKPA 4LQYA 4LRBA 3WBHA 1URAA 4NWXA 4NWJA 3E2DA 1AUKA 1E33P 3BDHA 4UPLA 1EW8A 5LRNA 3B5QA 5KXAA 5EGHA 2XR9A 4LRDA 4QAXA 2IUCA 1ALKA 4LREA 3TG0A 1ELZA 4GTXA 1O98A 5LIAA 2GLQA 5LQQA 3BDFA 1ALHA 5L0EA 4LRCA 1ZEFA 1KH5A 1EJJA 2W5SA 4FDIA 3BDGB 5DLVA 2W5QA 1KH4A 2GSOA 1EI6A 3Q3QA 2VQRA 5HRTA 1HJKA 3KD8A 5INHA 3SZZA 3NKRA 5L0KA 1ANIA 3UO0A 4KAVA 5DLTA 1ED9A 1ALJA 5IJSA 1KHJA 2QZUA 3T02A 4UPKA 2W8DA 5AJ9A 5L0BA 4UORA 1HQAA 4UPIA 2W5RA 1SHQA 3NKQA 3NKMA 1B8JA 1FSUA 4ZG6A 1SHNA 2RH6A 2GSNA 1O99A 1HDHA 2D1GA 3UN3A 1AJBA 3IDDA 4KAYA 3M8WA 4CYRA 3BDGA 3OT9A 4KM4A 3NKOA 4CXKA 4MY4A 2X98A 4KJDA 1Y7AA 3MK2A 4LRAA 4GTZA 3MK1A 2ANHA 2IUCB 1E2SP 3DYCA 3A52A 4LRFA 4CXUA 5C66A 2XRGA 3WAXA 3DPCA 4CYSA 4KJGA 3NVLA 2IFYA 4LR2A 3M8ZA 4MIVA 1EW9A 1ZEDA 3ED4A 3CMRA 3WAYA 3IGZB 1KH7A 1KH9A 5GOVA 1P49A 1AJCA 1URBA 5K4PA 3WAVA 2W5VA 3UN5A 1ZEBA 4UOPA 3SZYA 2W5WA 3M7VA 4ZG9A 3TX0A 4ZG7A 1KHNA 1EW2A 1ED8A 1EQJA 2G9YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ELX A;  2W5T A;  4CXS A;  1ANJ A;  2ZKT A;  3UN2 A;  4MHX A;  3UNY A;  3T01 A;  4B56 A;  5GRR A;  4LR9 A;  3LXQ A;  4UOO A;  2W8S A;  4GTW A;  1N2L A;  3NKN A;  4N7T A;  5IJQ A;  3T00 A;  4UPH A;  1AJD A;  1K7H A;  4LR8 A;  3WAW A;  3TWZ A;  1ELY A;  1KHK A;  1KHL A;  2W5X A;  4ZGA A;  5LRM A;  5TJ3 A;  4YR1 A;  1Y6V A;  5EGE A;  1E1Z P;  1N2K A;  2GSU A;  1E3C P;  3MK0 A;  4FDJ A;  4GTY A;  4TN0 A;  3M8Y A;  2GA3 A;  4LR7 A;  5DLW A;  3IGY B;  1ALI A;  1AJA A;  3NKP A;  4LQY A;  4LRB A;  3WBH A;  1URA A;  4NWX A;  4NWJ A;  3E2D A;  1AUK A;  1E33 P;  3BDH A;  4UPL A;  1EW8 A;  5LRN A;  3B5Q A;  5KXA A;  5EGH A;  2XR9 A;  4LRD A;  4QAX A;  2IUC A;  1ALK A;  4LRE A;  3TG0 A;  1ELZ A;  4GTX A;  1O98 A;  5LIA A;  2GLQ A;  5LQQ A;  3BDF A;  1ALH A;  5L0E A;  4LRC A;  1ZEF A;  1KH5 A;  1EJJ A;  2W5S A;  4FDI A;  3BDG B;  5DLV A;  2W5Q A;  1KH4 A;  2GSO A;  1EI6 A;  3Q3Q A;  2VQR A;  5HRT A;  1HJK A;  3KD8 A;  5INH A;  3SZZ A;  3NKR A;  5L0K A;  1ANI A;  3UO0 A;  4KAV A;  5DLT A;  1ED9 A;  1ALJ A;  5IJS A;  1KHJ A;  2QZU A;  3T02 A;  4UPK A;  2W8D A;  5AJ9 A;  5L0B A;  4UOR A;  1HQA A;  4UPI A;  2W5R A;  1SHQ A;  3NKQ A;  3NKM A;  1B8J A;  1FSU A;  4ZG6 A;  1SHN A;  2RH6 A;  2GSN A;  1O99 A;  1HDH A;  2D1G A;  3UN3 A;  1AJB A;  3IDD A;  4KAY A;  3M8W A;  4CYR A;  3BDG A;  3OT9 A;  4KM4 A;  3NKO A;  4CXK A;  4MY4 A;  2X98 A;  4KJD A;  1Y7A A;  3MK2 A;  4LRA A;  4GTZ A;  3MK1 A;  2ANH A;  2IUC B;  1E2S P;  3DYC A;  3A52 A;  4LRF A;  4CXU A;  5C66 A;  2XRG A;  3WAX A;  3DPC A;  4CYS A;  4KJG A;  3NVL A;  2IFY A;  4LR2 A;  3M8Z A;  4MIV A;  1EW9 A;  1ZED A;  3ED4 A;  3CMR A;  3WAY A;  3IGZ B;  1KH7 A;  1KH9 A;  5GOV A;  1P49 A;  1AJC A;  1URB A;  5K4P A;  3WAV A;  2W5V A;  3UN5 A;  1ZEB A;  4UOP A;  3SZY A;  2W5W A;  3M7V A;  4ZG9 A;  3TX0 A;  4ZG7 A;  1KHN A;  1EW2 A;  1ED8 A;  1EQJ A;  2G9Y A; 
#chains in the Genus database with same CATH topology
 1ELX A;  2W5T A;  4CXS A;  1ANJ A;  2ZKT A;  3UN2 A;  4MHX A;  3UNY A;  3T01 A;  4B56 A;  5GRR A;  4LR9 A;  3LXQ A;  4UOO A;  2W8S A;  4GTW A;  1N2L A;  3NKN A;  4N7T A;  5IJQ A;  3T00 A;  4UPH A;  1AJD A;  1K7H A;  4LR8 A;  3WAW A;  3TWZ A;  1ELY A;  1KHK A;  1KHL A;  2W5X A;  4ZGA A;  5LRM A;  5TJ3 A;  4YR1 A;  1Y6V A;  5EGE A;  1E1Z P;  1N2K A;  2GSU A;  1E3C P;  3MK0 A;  4FDJ A;  4GTY A;  4TN0 A;  3M8Y A;  2GA3 A;  4LR7 A;  5DLW A;  3IGY B;  1ALI A;  1AJA A;  3NKP A;  4LQY A;  4LRB A;  3WBH A;  1URA A;  4NWX A;  4NWJ A;  3E2D A;  1AUK A;  1E33 P;  3BDH A;  4UPL A;  1EW8 A;  5LRN A;  3B5Q A;  5KXA A;  5EGH A;  2XR9 A;  4LRD A;  4QAX A;  2IUC A;  1ALK A;  4LRE A;  3TG0 A;  1ELZ A;  4GTX A;  1O98 A;  5LIA A;  2GLQ A;  5LQQ A;  3BDF A;  1ALH A;  5L0E A;  4LRC A;  1ZEF A;  1KH5 A;  1EJJ A;  2W5S A;  4FDI A;  3BDG B;  5DLV A;  2W5Q A;  1KH4 A;  2GSO A;  1EI6 A;  3Q3Q A;  2VQR A;  5HRT A;  1HJK A;  3KD8 A;  5INH A;  3SZZ A;  3NKR A;  5L0K A;  1ANI A;  3UO0 A;  4KAV A;  5DLT A;  1ED9 A;  1ALJ A;  5IJS A;  1KHJ A;  2QZU A;  3T02 A;  4UPK A;  2W8D A;  5AJ9 A;  5L0B A;  4UOR A;  1HQA A;  4UPI A;  2W5R A;  1SHQ A;  3NKQ A;  3NKM A;  1B8J A;  1FSU A;  4ZG6 A;  1SHN A;  2RH6 A;  2GSN A;  1O99 A;  1HDH A;  2D1G A;  3UN3 A;  1AJB A;  3IDD A;  4KAY A;  3M8W A;  4CYR A;  3BDG A;  3OT9 A;  4KM4 A;  3NKO A;  4CXK A;  4MY4 A;  2X98 A;  4KJD A;  1Y7A A;  3MK2 A;  4LRA A;  4GTZ A;  3MK1 A;  2ANH A;  2IUC B;  1E2S P;  3DYC A;  3A52 A;  4LRF A;  4CXU A;  5C66 A;  2XRG A;  3WAX A;  3DPC A;  4CYS A;  4KJG A;  3NVL A;  2IFY A;  4LR2 A;  3M8Z A;  4MIV A;  1EW9 A;  1ZED A;  3ED4 A;  3CMR A;  3WAY A;  3IGZ B;  1KH7 A;  1KH9 A;  5GOV A;  1P49 A;  1AJC A;  1URB A;  5K4P A;  3WAV A;  2W5V A;  3UN5 A;  1ZEB A;  4UOP A;  3SZY A;  2W5W A;  3M7V A;  4ZG9 A;  3TX0 A;  4ZG7 A;  1KHN A;  1EW2 A;  1ED8 A;  1EQJ A;  2G9Y A; 
#chains in the Genus database with same CATH homology
 1ELX A;  2W5T A;  4CXS A;  1ANJ A;  2ZKT A;  3UN2 A;  4MHX A;  3UNY A;  3T01 A;  4B56 A;  5GRR A;  4LR9 A;  3LXQ A;  4UOO A;  2W8S A;  4GTW A;  1N2L A;  3NKN A;  4N7T A;  5IJQ A;  3T00 A;  4UPH A;  1AJD A;  1K7H A;  4LR8 A;  3WAW A;  3TWZ A;  1ELY A;  1KHK A;  1KHL A;  2W5X A;  4ZGA A;  5LRM A;  5TJ3 A;  4YR1 A;  1Y6V A;  5EGE A;  1E1Z P;  1N2K A;  2GSU A;  1E3C P;  3MK0 A;  4FDJ A;  4GTY A;  4TN0 A;  3M8Y A;  2GA3 A;  4LR7 A;  5DLW A;  3IGY B;  1ALI A;  1AJA A;  3NKP A;  4LQY A;  4LRB A;  3WBH A;  1URA A;  4NWX A;  4NWJ A;  3E2D A;  1AUK A;  1E33 P;  3BDH A;  4UPL A;  1EW8 A;  5LRN A;  3B5Q A;  5KXA A;  5EGH A;  2XR9 A;  4LRD A;  4QAX A;  2IUC A;  1ALK A;  4LRE A;  3TG0 A;  1ELZ A;  4GTX A;  1O98 A;  5LIA A;  2GLQ A;  5LQQ A;  3BDF A;  1ALH A;  5L0E A;  4LRC A;  1ZEF A;  1KH5 A;  1EJJ A;  2W5S A;  4FDI A;  3BDG B;  5DLV A;  2W5Q A;  1KH4 A;  2GSO A;  1EI6 A;  3Q3Q A;  2VQR A;  5HRT A;  1HJK A;  3KD8 A;  5INH A;  3SZZ A;  3NKR A;  5L0K A;  1ANI A;  3UO0 A;  4KAV A;  5DLT A;  1ED9 A;  1ALJ A;  5IJS A;  1KHJ A;  2QZU A;  3T02 A;  4UPK A;  2W8D A;  5AJ9 A;  5L0B A;  4UOR A;  1HQA A;  4UPI A;  2W5R A;  1SHQ A;  3NKQ A;  3NKM A;  1B8J A;  1FSU A;  4ZG6 A;  1SHN A;  2RH6 A;  2GSN A;  1O99 A;  1HDH A;  2D1G A;  3UN3 A;  1AJB A;  3IDD A;  4KAY A;  3M8W A;  4CYR A;  3BDG A;  3OT9 A;  4KM4 A;  3NKO A;  4CXK A;  4MY4 A;  2X98 A;  4KJD A;  1Y7A A;  3MK2 A;  4LRA A;  4GTZ A;  3MK1 A;  2ANH A;  2IUC B;  1E2S P;  3DYC A;  3A52 A;  4LRF A;  4CXU A;  5C66 A;  2XRG A;  3WAX A;  3DPC A;  4CYS A;  4KJG A;  3NVL A;  2IFY A;  4LR2 A;  3M8Z A;  4MIV A;  1EW9 A;  1ZED A;  3ED4 A;  3CMR A;  3WAY A;  3IGZ B;  1KH7 A;  1KH9 A;  5GOV A;  1P49 A;  1AJC A;  1URB A;  5K4P A;  3WAV A;  2W5V A;  3UN5 A;  1ZEB A;  4UOP A;  3SZY A;  2W5W A;  3M7V A;  4ZG9 A;  3TX0 A;  4ZG7 A;  1KHN A;  1EW2 A;  1ED8 A;  1EQJ A;  2G9Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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