3CMRA

E. coli alkaline phosphatase mutant r166s in complex with phosphate
Total Genus 164
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
164
Knots found
sequence length
445
structure length
445
Chain Sequence
MPVLENRAAQGDITAPGGARRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALVAHVTSSKCYGPSATSEKCPGNALEKGGKGSITEQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTDQTDLFYTMKAALGL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Arginine coordination in enzymatic phosphoryl transfer: evaluation of the effect of Arg166 mutations in Escherichia coli alkaline phosphatase
pubmed doi rcsb
molecule tags Hydrolase
source organism Escherichia coli
molecule keywords Alkaline phosphatase
total genus 164
structure length 445
sequence length 445
chains with identical sequence B
other databases KnotProt 2.0: S +31
ec nomenclature ec 3.1.3.1: Alkaline phosphatase.
pdb deposition date 2008-03-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00245 Alk_phosphatase Alkaline phosphatase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.720.10 Alpha Beta 3-Layer(aba) Sandwich Alkaline Phosphatase, subunit A Alkaline Phosphatase, subunit A 3cmrA00
1KH4A 4CXUA 4ZG6A 1AJDA 1K7HA 3WAXA 2W5VA 3B5QA 4UPLA 4ZG7A 5LQQA 1P49A 3MK2A 4UPIA 1KHLA 3NKMA 4FDJA 4TN0A 4YR1A 3SZZA 4LRCA 4LRFA 1O99A 2W5WA 2IFYA 1Y6VA 1ALKA 3E2DA 5GRRA 5AJ9A 3NKOA 3T02A 1ZEBA 3M7VA 1ED8A 4KAVA 4GTYA 4LR2A 4NWXA 3M8WA 5GOVA 2W5TA 3IDDA 4KJGA 2ZKTA 3T00A 4NWJA 5L0BA 1HQAA 1ELYA 2GSOA 3CMRA 1KH5A 1E1ZP 2RH6A 4UOPA 3NVLA 5IJSA 4UPHA 3TG0A 3BDHA 1KH9A 3BDGA 3IGYB 1AJBA 1EQJA 4N7TA 3TX0A 3OT9A 4UORA 1O98A 1AJAA 1HJKA 1SHNA 3BDFA 2D1GA 5L0KA 1E33P 1ANIA 3WAVA 1ELXA 2X98A 4GTXA 1HDHA 1FSUA 3BDGB 1Y7AA 3SZYA 3UN3A 5C66A 2GSUA 3LXQA 3UN2A 3M8ZA 4MHXA 1N2KA 1EW9A 1ZEFA 5DLTA 4GTZA 1ALHA 2XRGA 4GTWA 5INHA 5EGHA 4MIVA 5LRNA 5HRTA 5EGEA 5DLWA 3A52A 3UO0A 3WAYA 3UN5A 5LRMA 4ZG9A 1E2SP 2G9YA 1KHNA 3MK1A 1KHKA 4KAYA 1ALIA 4CYRA 1KHJA 3WBHA 2ANHA 2W5XA 4CYSA 2QZUA 3Q3QA 3TWZA 1AJCA 4CXSA 3NKRA 3T01A 2W5SA 2W5QA 3UNYA 4KM4A 4B56A 5IJQA 3ED4A 2W8DA 2GLQA 3DYCA 4LRAA 3WAWA 3MK0A 2W5RA 2W8SA 1EI6A 3DPCA 4UPKA 5KXAA 4CXKA 1B8JA 2GA3A 4FDIA 4ZGAA 1URBA 4LR8A 2XR9A 1ZEDA 3NKPA 4LREA 4LQYA 4LRDA 1KH7A 5TJ3A 1EJJA 3NKQA 4UOOA 2GSNA 4LR7A 1ANJA 1ELZA 1N2LA 2IUCA 1E3CP 1ED9A 4MY4A 3M8YA 5K4PA 3IGZB 1ALJA 1EW2A 4KJDA 4LR9A 4QAXA 5LIAA 1AUKA 1SHQA 2IUCB 3KD8A 1EW8A 4LRBA 5L0EA 2VQRA 3NKNA 1URAA 5DLVA
chains in the Genus database with same CATH superfamily
1KH4A 4CXUA 4ZG6A 1AJDA 1K7HA 3WAXA 2W5VA 3B5QA 4UPLA 4ZG7A 5LQQA 1P49A 3MK2A 4UPIA 1KHLA 3NKMA 4FDJA 4TN0A 4YR1A 3SZZA 4LRCA 4LRFA 1O99A 2W5WA 2IFYA 1Y6VA 1ALKA 3E2DA 5GRRA 5AJ9A 3NKOA 3T02A 1ZEBA 3M7VA 1ED8A 4KAVA 4GTYA 4LR2A 4NWXA 3M8WA 5GOVA 2W5TA 3IDDA 4KJGA 2ZKTA 3T00A 4NWJA 5L0BA 1HQAA 1ELYA 2GSOA 3CMRA 1KH5A 1E1ZP 2RH6A 4UOPA 3NVLA 5IJSA 4UPHA 3TG0A 3BDHA 1KH9A 3BDGA 3IGYB 1AJBA 1EQJA 4N7TA 3TX0A 3OT9A 4UORA 1O98A 1AJAA 1HJKA 1SHNA 3BDFA 2D1GA 5L0KA 1E33P 1ANIA 3WAVA 1ELXA 2X98A 4GTXA 1HDHA 1FSUA 3BDGB 1Y7AA 3SZYA 3UN3A 5C66A 2GSUA 3LXQA 3UN2A 3M8ZA 4MHXA 1N2KA 1EW9A 1ZEFA 5DLTA 4GTZA 1ALHA 2XRGA 4GTWA 5INHA 5EGHA 4MIVA 5LRNA 5HRTA 5EGEA 5DLWA 3A52A 3UO0A 3WAYA 3UN5A 5LRMA 4ZG9A 1E2SP 2G9YA 1KHNA 3MK1A 1KHKA 4KAYA 1ALIA 4CYRA 1KHJA 3WBHA 2ANHA 2W5XA 4CYSA 2QZUA 3Q3QA 3TWZA 1AJCA 4CXSA 3NKRA 3T01A 2W5SA 2W5QA 3UNYA 4KM4A 4B56A 5IJQA 3ED4A 2W8DA 2GLQA 3DYCA 4LRAA 3WAWA 3MK0A 2W5RA 2W8SA 1EI6A 3DPCA 4UPKA 5KXAA 4CXKA 1B8JA 2GA3A 4FDIA 4ZGAA 1URBA 4LR8A 2XR9A 1ZEDA 3NKPA 4LREA 4LQYA 4LRDA 1KH7A 5TJ3A 1EJJA 3NKQA 4UOOA 2GSNA 4LR7A 1ANJA 1ELZA 1N2LA 2IUCA 1E3CP 1ED9A 4MY4A 3M8YA 5K4PA 3IGZB 1ALJA 1EW2A 4KJDA 4LR9A 4QAXA 5LIAA 1AUKA 1SHQA 2IUCB 3KD8A 1EW8A 4LRBA 5L0EA 2VQRA 3NKNA 1URAA 5DLVA
chains in the Genus database with same CATH topology
1KH4A 4CXUA 4ZG6A 1AJDA 1K7HA 3WAXA 2W5VA 3B5QA 4UPLA 4ZG7A 5LQQA 1P49A 3MK2A 4UPIA 1KHLA 3NKMA 4FDJA 4TN0A 4YR1A 3SZZA 4LRCA 4LRFA 1O99A 2W5WA 2IFYA 1Y6VA 1ALKA 3E2DA 5GRRA 5AJ9A 3NKOA 3T02A 1ZEBA 3M7VA 1ED8A 4KAVA 4GTYA 4LR2A 4NWXA 3M8WA 5GOVA 2W5TA 3IDDA 4KJGA 2ZKTA 3T00A 4NWJA 5L0BA 1HQAA 1ELYA 2GSOA 3CMRA 1KH5A 1E1ZP 2RH6A 4UOPA 3NVLA 5IJSA 4UPHA 3TG0A 3BDHA 1KH9A 3BDGA 3IGYB 1AJBA 1EQJA 4N7TA 3TX0A 3OT9A 4UORA 1O98A 1AJAA 1HJKA 1SHNA 3BDFA 2D1GA 5L0KA 1E33P 1ANIA 3WAVA 1ELXA 2X98A 4GTXA 1HDHA 1FSUA 3BDGB 1Y7AA 3SZYA 3UN3A 5C66A 2GSUA 3LXQA 3UN2A 3M8ZA 4MHXA 1N2KA 1EW9A 1ZEFA 5DLTA 4GTZA 1ALHA 2XRGA 4GTWA 5INHA 5EGHA 4MIVA 5LRNA 5HRTA 5EGEA 5DLWA 3A52A 3UO0A 3WAYA 3UN5A 5LRMA 4ZG9A 1E2SP 2G9YA 1KHNA 3MK1A 1KHKA 4KAYA 1ALIA 4CYRA 1KHJA 3WBHA 2ANHA 2W5XA 4CYSA 2QZUA 3Q3QA 3TWZA 1AJCA 4CXSA 3NKRA 3T01A 2W5SA 2W5QA 3UNYA 4KM4A 4B56A 5IJQA 3ED4A 2W8DA 2GLQA 3DYCA 4LRAA 3WAWA 3MK0A 2W5RA 2W8SA 1EI6A 3DPCA 4UPKA 5KXAA 4CXKA 1B8JA 2GA3A 4FDIA 4ZGAA 1URBA 4LR8A 2XR9A 1ZEDA 3NKPA 4LREA 4LQYA 4LRDA 1KH7A 5TJ3A 1EJJA 3NKQA 4UOOA 2GSNA 4LR7A 1ANJA 1ELZA 1N2LA 2IUCA 1E3CP 1ED9A 4MY4A 3M8YA 5K4PA 3IGZB 1ALJA 1EW2A 4KJDA 4LR9A 4QAXA 5LIAA 1AUKA 1SHQA 2IUCB 3KD8A 1EW8A 4LRBA 5L0EA 2VQRA 3NKNA 1URAA 5DLVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KH4 A;  4CXU A;  4ZG6 A;  1AJD A;  1K7H A;  3WAX A;  2W5V A;  3B5Q A;  4UPL A;  4ZG7 A;  5LQQ A;  1P49 A;  3MK2 A;  4UPI A;  1KHL A;  3NKM A;  4FDJ A;  4TN0 A;  4YR1 A;  3SZZ A;  4LRC A;  4LRF A;  1O99 A;  2W5W A;  2IFY A;  1Y6V A;  1ALK A;  3E2D A;  5GRR A;  5AJ9 A;  3NKO A;  3T02 A;  1ZEB A;  3M7V A;  1ED8 A;  4KAV A;  4GTY A;  4LR2 A;  4NWX A;  3M8W A;  5GOV A;  2W5T A;  3IDD A;  4KJG A;  2ZKT A;  3T00 A;  4NWJ A;  5L0B A;  1HQA A;  1ELY A;  2GSO A;  3CMR A;  1KH5 A;  1E1Z P;  2RH6 A;  4UOP A;  3NVL A;  5IJS A;  4UPH A;  3TG0 A;  3BDH A;  1KH9 A;  3BDG A;  3IGY B;  1AJB A;  1EQJ A;  4N7T A;  3TX0 A;  3OT9 A;  4UOR A;  1O98 A;  1AJA A;  1HJK A;  1SHN A;  3BDF A;  2D1G A;  5L0K A;  1E33 P;  1ANI A;  3WAV A;  1ELX A;  2X98 A;  4GTX A;  1HDH A;  1FSU A;  3BDG B;  1Y7A A;  3SZY A;  3UN3 A;  5C66 A;  2GSU A;  3LXQ A;  3UN2 A;  3M8Z A;  4MHX A;  1N2K A;  1EW9 A;  1ZEF A;  5DLT A;  4GTZ A;  1ALH A;  2XRG A;  4GTW A;  5INH A;  5EGH A;  4MIV A;  5LRN A;  5HRT A;  5EGE A;  5DLW A;  3A52 A;  3UO0 A;  3WAY A;  3UN5 A;  5LRM A;  4ZG9 A;  1E2S P;  2G9Y A;  1KHN A;  3MK1 A;  1KHK A;  4KAY A;  1ALI A;  4CYR A;  1KHJ A;  3WBH A;  2ANH A;  2W5X A;  4CYS A;  2QZU A;  3Q3Q A;  3TWZ A;  1AJC A;  4CXS A;  3NKR A;  3T01 A;  2W5S A;  2W5Q A;  3UNY A;  4KM4 A;  4B56 A;  5IJQ A;  3ED4 A;  2W8D A;  2GLQ A;  3DYC A;  4LRA A;  3WAW A;  3MK0 A;  2W5R A;  2W8S A;  1EI6 A;  3DPC A;  4UPK A;  5KXA A;  4CXK A;  1B8J A;  2GA3 A;  4FDI A;  4ZGA A;  1URB A;  4LR8 A;  2XR9 A;  1ZED A;  3NKP A;  4LRE A;  4LQY A;  4LRD A;  1KH7 A;  5TJ3 A;  1EJJ A;  3NKQ A;  4UOO A;  2GSN A;  4LR7 A;  1ANJ A;  1ELZ A;  1N2L A;  2IUC A;  1E3C P;  1ED9 A;  4MY4 A;  3M8Y A;  5K4P A;  3IGZ B;  1ALJ A;  1EW2 A;  4KJD A;  4LR9 A;  4QAX A;  5LIA A;  1AUK A;  1SHQ A;  2IUC B;  3KD8 A;  1EW8 A;  4LRB A;  5L0E A;  2VQR A;  3NKN A;  1URA A;  5DLV A; 
#chains in the Genus database with same CATH topology
 1KH4 A;  4CXU A;  4ZG6 A;  1AJD A;  1K7H A;  3WAX A;  2W5V A;  3B5Q A;  4UPL A;  4ZG7 A;  5LQQ A;  1P49 A;  3MK2 A;  4UPI A;  1KHL A;  3NKM A;  4FDJ A;  4TN0 A;  4YR1 A;  3SZZ A;  4LRC A;  4LRF A;  1O99 A;  2W5W A;  2IFY A;  1Y6V A;  1ALK A;  3E2D A;  5GRR A;  5AJ9 A;  3NKO A;  3T02 A;  1ZEB A;  3M7V A;  1ED8 A;  4KAV A;  4GTY A;  4LR2 A;  4NWX A;  3M8W A;  5GOV A;  2W5T A;  3IDD A;  4KJG A;  2ZKT A;  3T00 A;  4NWJ A;  5L0B A;  1HQA A;  1ELY A;  2GSO A;  3CMR A;  1KH5 A;  1E1Z P;  2RH6 A;  4UOP A;  3NVL A;  5IJS A;  4UPH A;  3TG0 A;  3BDH A;  1KH9 A;  3BDG A;  3IGY B;  1AJB A;  1EQJ A;  4N7T A;  3TX0 A;  3OT9 A;  4UOR A;  1O98 A;  1AJA A;  1HJK A;  1SHN A;  3BDF A;  2D1G A;  5L0K A;  1E33 P;  1ANI A;  3WAV A;  1ELX A;  2X98 A;  4GTX A;  1HDH A;  1FSU A;  3BDG B;  1Y7A A;  3SZY A;  3UN3 A;  5C66 A;  2GSU A;  3LXQ A;  3UN2 A;  3M8Z A;  4MHX A;  1N2K A;  1EW9 A;  1ZEF A;  5DLT A;  4GTZ A;  1ALH A;  2XRG A;  4GTW A;  5INH A;  5EGH A;  4MIV A;  5LRN A;  5HRT A;  5EGE A;  5DLW A;  3A52 A;  3UO0 A;  3WAY A;  3UN5 A;  5LRM A;  4ZG9 A;  1E2S P;  2G9Y A;  1KHN A;  3MK1 A;  1KHK A;  4KAY A;  1ALI A;  4CYR A;  1KHJ A;  3WBH A;  2ANH A;  2W5X A;  4CYS A;  2QZU A;  3Q3Q A;  3TWZ A;  1AJC A;  4CXS A;  3NKR A;  3T01 A;  2W5S A;  2W5Q A;  3UNY A;  4KM4 A;  4B56 A;  5IJQ A;  3ED4 A;  2W8D A;  2GLQ A;  3DYC A;  4LRA A;  3WAW A;  3MK0 A;  2W5R A;  2W8S A;  1EI6 A;  3DPC A;  4UPK A;  5KXA A;  4CXK A;  1B8J A;  2GA3 A;  4FDI A;  4ZGA A;  1URB A;  4LR8 A;  2XR9 A;  1ZED A;  3NKP A;  4LRE A;  4LQY A;  4LRD A;  1KH7 A;  5TJ3 A;  1EJJ A;  3NKQ A;  4UOO A;  2GSN A;  4LR7 A;  1ANJ A;  1ELZ A;  1N2L A;  2IUC A;  1E3C P;  1ED9 A;  4MY4 A;  3M8Y A;  5K4P A;  3IGZ B;  1ALJ A;  1EW2 A;  4KJD A;  4LR9 A;  4QAX A;  5LIA A;  1AUK A;  1SHQ A;  2IUC B;  3KD8 A;  1EW8 A;  4LRB A;  5L0E A;  2VQR A;  3NKN A;  1URA A;  5DLV A; 
#chains in the Genus database with same CATH homology
 1KH4 A;  4CXU A;  4ZG6 A;  1AJD A;  1K7H A;  3WAX A;  2W5V A;  3B5Q A;  4UPL A;  4ZG7 A;  5LQQ A;  1P49 A;  3MK2 A;  4UPI A;  1KHL A;  3NKM A;  4FDJ A;  4TN0 A;  4YR1 A;  3SZZ A;  4LRC A;  4LRF A;  1O99 A;  2W5W A;  2IFY A;  1Y6V A;  1ALK A;  3E2D A;  5GRR A;  5AJ9 A;  3NKO A;  3T02 A;  1ZEB A;  3M7V A;  1ED8 A;  4KAV A;  4GTY A;  4LR2 A;  4NWX A;  3M8W A;  5GOV A;  2W5T A;  3IDD A;  4KJG A;  2ZKT A;  3T00 A;  4NWJ A;  5L0B A;  1HQA A;  1ELY A;  2GSO A;  3CMR A;  1KH5 A;  1E1Z P;  2RH6 A;  4UOP A;  3NVL A;  5IJS A;  4UPH A;  3TG0 A;  3BDH A;  1KH9 A;  3BDG A;  3IGY B;  1AJB A;  1EQJ A;  4N7T A;  3TX0 A;  3OT9 A;  4UOR A;  1O98 A;  1AJA A;  1HJK A;  1SHN A;  3BDF A;  2D1G A;  5L0K A;  1E33 P;  1ANI A;  3WAV A;  1ELX A;  2X98 A;  4GTX A;  1HDH A;  1FSU A;  3BDG B;  1Y7A A;  3SZY A;  3UN3 A;  5C66 A;  2GSU A;  3LXQ A;  3UN2 A;  3M8Z A;  4MHX A;  1N2K A;  1EW9 A;  1ZEF A;  5DLT A;  4GTZ A;  1ALH A;  2XRG A;  4GTW A;  5INH A;  5EGH A;  4MIV A;  5LRN A;  5HRT A;  5EGE A;  5DLW A;  3A52 A;  3UO0 A;  3WAY A;  3UN5 A;  5LRM A;  4ZG9 A;  1E2S P;  2G9Y A;  1KHN A;  3MK1 A;  1KHK A;  4KAY A;  1ALI A;  4CYR A;  1KHJ A;  3WBH A;  2ANH A;  2W5X A;  4CYS A;  2QZU A;  3Q3Q A;  3TWZ A;  1AJC A;  4CXS A;  3NKR A;  3T01 A;  2W5S A;  2W5Q A;  3UNY A;  4KM4 A;  4B56 A;  5IJQ A;  3ED4 A;  2W8D A;  2GLQ A;  3DYC A;  4LRA A;  3WAW A;  3MK0 A;  2W5R A;  2W8S A;  1EI6 A;  3DPC A;  4UPK A;  5KXA A;  4CXK A;  1B8J A;  2GA3 A;  4FDI A;  4ZGA A;  1URB A;  4LR8 A;  2XR9 A;  1ZED A;  3NKP A;  4LRE A;  4LQY A;  4LRD A;  1KH7 A;  5TJ3 A;  1EJJ A;  3NKQ A;  4UOO A;  2GSN A;  4LR7 A;  1ANJ A;  1ELZ A;  1N2L A;  2IUC A;  1E3C P;  1ED9 A;  4MY4 A;  3M8Y A;  5K4P A;  3IGZ B;  1ALJ A;  1EW2 A;  4KJD A;  4LR9 A;  4QAX A;  5LIA A;  1AUK A;  1SHQ A;  2IUC B;  3KD8 A;  1EW8 A;  4LRB A;  5L0E A;  2VQR A;  3NKN A;  1URA A;  5DLV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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