4C8AA

Mouse znrf3 ectodomain crystal form ii
Total Genus 33
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
33
sequence length
153
structure length
146
Chain Sequence
KETAFVEVVLFESSPSGDYTTHTTGLTGRFSRAGAMLSAEGEIVQMHPLGLCLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Ligase
source organism Mus musculus
publication title Structural and Molecular Basis of Znrf3/Rnf43 Transmembrane Ubiquitin Ligase Inhibition by the Wnt Agonist R-Spondin.
pubmed doi rcsb
molecule keywords E3 UBIQUITIN-PROTEIN LIGASE ZNRF3
total genus 33
structure length 146
sequence length 153
chains with identical sequence B, C
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2013-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF18212 ZNRF_3_ecto ZNRF-3 Ectodomain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.30.30 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Glucose Oxidase; domain 1 4c8aA00
2C6GA 4C86A 1CX8A 3IWWA 4MCSA 2JBJA 4C9VA 4CDKA 4NGMA 3BHXA 4OMEA 4P4JA 4NGQA 2PVWA 5ELYA 4TJVA 4NGTA 3D7HA 2EK9A 4C84A 2CIJA 3ICUA 5IB9A 3FEDA 3RBUA 1Z8LA 2XEJA 4P4BA 4NGPA 2OR4A 1WVMA 4TJXA 4TWEA 4OC4A 2XEGA 2C6CA 4MCPA 3BI0A 4C8AA 3SJEA 3D7DA 3BI1A 4C9UA 4P4DA 3VTAA 1V6CA 2PVVA 4C8UA 4OC0A 1DE4C 4YN3A 3I6SA 4OC1A 3S9MA 3FEEA 1XF1A 2EK8A 2C6PA 4MCQA 4C9AA 4NGSA 4C8TA 4X3RA 4P4EA 3D7FA 2OOTA 4C9RA 4OC3A 4P4FA 4MCRA 4W9YA 4C8CA 3FF3A 4C85A 4P45A 4OC5A 3S9LA 3SJFA 3IIBA 3D7GA 4LQGA 4KNGE 4P4IA 2XEFA 3FECA 4JZ0A 5D29A 4C99A 4OC2A 4P44A 2JBKA 4NGRA 3SJXA 3KASA 3EIFA 5F09A 3SJGA 4C9EA 4C8PA 4C8FA 4NGNA 3BXMA 4JYWA 2XEIA 4CDJA 3I74A 3S9NA 1Y9ZA
chains in the Genus database with same CATH superfamily
2C6GA 4C86A 1JDBC 1CX8A 2HI6A 4E5SA 3IWWA 4MCSA 5F5XA 3TLGA 2JBJA 1CE8B 4MJXA 4C9VA 4CDKA 4E94A 4NGMA 3BHXA 1T36B 2FM4A 4OMEA 4P4JA 4NGQA 2PVWA 5ELYA 1R61A 4INJA 4TJVA 4NGTA 3D7HA 2EK9A 3EZBA 4C84A 3GJZA 5F1YA 2MP0A 2CIJA 3T5MA 2OLSA 1NXJA 3ICUA 5IB9A 2AUNA 2YJTA 2D0OA 3FEDA 1CS0B 3TLBA 4JVOA 3RBUA 1Z8LA 2GP4A 1ZYMA 1VBGA 2XEJA 4MI1A 4P4BA 5F9MA 4CZ1A 4NGPA 2OR4A 1WVMA 4TJXA 4TWEA 4OC4A 3TYXA 2XEGA 3G23A 2EZBA 2C6CA 2DIKA 4MCPA 3BI0A 2EZCA 1VI4A 3TLAA 4C8AA 3TLEA 3SJEA 3K4IA 3D7DA 3T0TA 3BI1A 4M8DA 4C9UA 1ZRSA 2AUMA 4P4DA 2D0PA 5FD8A 2E28A 1V6CA 2PVVA 3VTAA 4OC0A 4C8UA 1DE4C 4YN3A 3I6SA 4OC1A 3S9MA 2B0AA 3FEEA 1XF1A 2EK8A 2C6PA 4MCQA 4C9AA 4NGSA 3T05A 4C8TA 4X3RA 3T07A 4P4EA 3D7FA 2HROA 4EYSA 4COGA 2OOTA 3SR3A 4H1HA 4C9RA 1GGOA 4OC3A 3NOJA 4P4FA 4MCRA 4W9YA 1NBWA 4C8CA 3TLGB 3FF3A 4C85A 4P45A 4OC5A 1DIKA 3K9TA 3SJFA 1JDEA 5JVLA 3S9LA 3U1BA 3C8OA 1EZAA 3IIBA 3D7GA 3KRVA 4LQGA 1Q5XA 4KNGE 4P4IA 1VBHA 2XEFA 2PCNA 1EZBA 3FECA 4JZ0A 4CO9A 1BXRB 5D29A 2EZAA 3TLZA 4C99A 4OC2A 4P44A 3TLYA 4COBA 2JBKA 3EZEA 1M6VB 1C3OB 5IR2A 5JYBA 4NGRA 3SJXA 3KASA 2R82A 3EZAA 2YJVA 4IIYA 2C5QA 4IIXA 3EIFA 4J0NA 5F09A 3SJGA 5K99A 4C9EA 2HWGA 4C8PA 2X0SA 4C8FA 4NGNA 3TLCA 1KBLA 3BXMA 4JYWA 1A9XB 1J3LA 1ZL0A 2XEIA 1KEEB 4CDJA 3I74A 1KC7A 1C30B 3S9NA 1Y9ZA
chains in the Genus database with same CATH topology
2C6GA 4C86A 1CX8A 3IWWA 4MCSA 2JBJA 4C9VA 4CDKA 4NGMA 3BHXA 4OMEA 4P4JA 4NGQA 2PVWA 5ELYA 4TJVA 4NGTA 3D7HA 2EK9A 4C84A 2CIJA 3ICUA 5IB9A 3FEDA 3RBUA 1Z8LA 2GP4A 2XEJA 4P4BA 4NGPA 2OR4A 1WVMA 4TJXA 4TWEA 4OC4A 2XEGA 2C6CA 4MCPA 3BI0A 4C8AA 3SJEA 3D7DA 3BI1A 4C9UA 4P4DA 3VTAA 1V6CA 2PVVA 4C8UA 4OC0A 1DE4C 4YN3A 3I6SA 4OC1A 3S9MA 3FEEA 1XF1A 2EK8A 2C6PA 4MCQA 4C9AA 4NGSA 4C8TA 4X3RA 4P4EA 3D7FA 2OOTA 4C9RA 4OC3A 4P4FA 4MCRA 4W9YA 4C8CA 3FF3A 4C85A 4P45A 4OC5A 3K9TA 3SJFA 3S9LA 3IIBA 3D7GA 4LQGA 4KNGE 4P4IA 2XEFA 3FECA 4JZ0A 5D29A 4C99A 4OC2A 4P44A 2JBKA 5IR2A 4NGRA 3SJXA 3KASA 2C5QA 3EIFA 5F09A 3SJGA 4C9EA 4C8PA 4C8FA 4NGNA 3BXMA 4JYWA 2XEIA 4CDJA 3I74A 3S9NA 1Y9ZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2C6G A;  4C86 A;  1CX8 A;  3IWW A;  4MCS A;  2JBJ A;  4C9V A;  4CDK A;  4NGM A;  3BHX A;  4OME A;  4P4J A;  4NGQ A;  2PVW A;  5ELY A;  4TJV A;  4NGT A;  3D7H A;  2EK9 A;  4C84 A;  2CIJ A;  3ICU A;  5IB9 A;  3FED A;  3RBU A;  1Z8L A;  2XEJ A;  4P4B A;  4NGP A;  2OR4 A;  1WVM A;  4TJX A;  4TWE A;  4OC4 A;  2XEG A;  2C6C A;  4MCP A;  3BI0 A;  4C8A A;  3SJE A;  3D7D A;  3BI1 A;  4C9U A;  4P4D A;  3VTA A;  1V6C A;  2PVV A;  4C8U A;  4OC0 A;  1DE4 C;  4YN3 A;  3I6S A;  4OC1 A;  3S9M A;  3FEE A;  1XF1 A;  2EK8 A;  2C6P A;  4MCQ A;  4C9A A;  4NGS A;  4C8T A;  4X3R A;  4P4E A;  3D7F A;  2OOT A;  4C9R A;  4OC3 A;  4P4F A;  4MCR A;  4W9Y A;  4C8C A;  3FF3 A;  4C85 A;  4P45 A;  4OC5 A;  3S9L A;  3SJF A;  3IIB A;  3D7G A;  4LQG A;  4KNG E;  4P4I A;  2XEF A;  3FEC A;  4JZ0 A;  5D29 A;  4C99 A;  4OC2 A;  4P44 A;  2JBK A;  4NGR A;  3SJX A;  3KAS A;  3EIF A;  5F09 A;  3SJG A;  4C9E A;  4C8P A;  4C8F A;  4NGN A;  3BXM A;  4JYW A;  2XEI A;  4CDJ A;  3I74 A;  3S9N A;  1Y9Z A; 
#chains in the Genus database with same CATH topology
 2C6G A;  4C86 A;  1JDB C;  1CX8 A;  2HI6 A;  4E5S A;  3IWW A;  4MCS A;  5F5X A;  3TLG A;  2JBJ A;  1CE8 B;  4MJX A;  4C9V A;  4CDK A;  4E94 A;  4NGM A;  3BHX A;  1T36 B;  2FM4 A;  4OME A;  4P4J A;  4NGQ A;  2PVW A;  5ELY A;  1R61 A;  4INJ A;  4TJV A;  4NGT A;  3D7H A;  2EK9 A;  3EZB A;  4C84 A;  3GJZ A;  5F1Y A;  2MP0 A;  2CIJ A;  3T5M A;  2OLS A;  1NXJ A;  3ICU A;  5IB9 A;  2AUN A;  2YJT A;  2D0O A;  3FED A;  1CS0 B;  3TLB A;  4JVO A;  3RBU A;  1Z8L A;  2GP4 A;  1ZYM A;  1VBG A;  2XEJ A;  4MI1 A;  4P4B A;  5F9M A;  4CZ1 A;  4NGP A;  2OR4 A;  1WVM A;  4TJX A;  4TWE A;  4OC4 A;  3TYX A;  2XEG A;  3G23 A;  2EZB A;  2C6C A;  2DIK A;  4MCP A;  3BI0 A;  2EZC A;  1VI4 A;  3TLA A;  4C8A A;  3TLE A;  3SJE A;  3K4I A;  3D7D A;  3T0T A;  3BI1 A;  4M8D A;  4C9U A;  1ZRS A;  2AUM A;  4P4D A;  2D0P A;  5FD8 A;  2E28 A;  1V6C A;  2PVV A;  3VTA A;  4OC0 A;  4C8U A;  1DE4 C;  4YN3 A;  3I6S A;  4OC1 A;  3S9M A;  2B0A A;  3FEE A;  1XF1 A;  2EK8 A;  2C6P A;  4MCQ A;  4C9A A;  4NGS A;  3T05 A;  4C8T A;  4X3R A;  3T07 A;  4P4E A;  3D7F A;  2HRO A;  4EYS A;  4COG A;  2OOT A;  3SR3 A;  4H1H A;  4C9R A;  1GGO A;  4OC3 A;  3NOJ A;  4P4F A;  4MCR A;  4W9Y A;  1NBW A;  4C8C A;  3TLG B;  3FF3 A;  4C85 A;  4P45 A;  4OC5 A;  1DIK A;  3K9T A;  3SJF A;  1JDE A;  5JVL A;  3S9L A;  3U1B A;  3C8O A;  1EZA A;  3IIB A;  3D7G A;  3KRV A;  4LQG A;  1Q5X A;  4KNG E;  4P4I A;  1VBH A;  2XEF A;  2PCN A;  1EZB A;  3FEC A;  4JZ0 A;  4CO9 A;  1BXR B;  5D29 A;  2EZA A;  3TLZ A;  4C99 A;  4OC2 A;  4P44 A;  3TLY A;  4COB A;  2JBK A;  3EZE A;  1M6V B;  1C3O B;  5IR2 A;  5JYB A;  4NGR A;  3SJX A;  3KAS A;  2R82 A;  3EZA A;  2YJV A;  4IIY A;  2C5Q A;  4IIX A;  3EIF A;  4J0N A;  5F09 A;  3SJG A;  5K99 A;  4C9E A;  2HWG A;  4C8P A;  2X0S A;  4C8F A;  4NGN A;  3TLC A;  1KBL A;  3BXM A;  4JYW A;  1A9X B;  1J3L A;  1ZL0 A;  2XEI A;  1KEE B;  4CDJ A;  3I74 A;  1KC7 A;  1C30 B;  3S9N A;  1Y9Z A; 
#chains in the Genus database with same CATH homology
 2C6G A;  4C86 A;  1CX8 A;  3IWW A;  4MCS A;  2JBJ A;  4C9V A;  4CDK A;  4NGM A;  3BHX A;  4OME A;  4P4J A;  4NGQ A;  2PVW A;  5ELY A;  4TJV A;  4NGT A;  3D7H A;  2EK9 A;  4C84 A;  2CIJ A;  3ICU A;  5IB9 A;  3FED A;  3RBU A;  1Z8L A;  2GP4 A;  2XEJ A;  4P4B A;  4NGP A;  2OR4 A;  1WVM A;  4TJX A;  4TWE A;  4OC4 A;  2XEG A;  2C6C A;  4MCP A;  3BI0 A;  4C8A A;  3SJE A;  3D7D A;  3BI1 A;  4C9U A;  4P4D A;  3VTA A;  1V6C A;  2PVV A;  4C8U A;  4OC0 A;  1DE4 C;  4YN3 A;  3I6S A;  4OC1 A;  3S9M A;  3FEE A;  1XF1 A;  2EK8 A;  2C6P A;  4MCQ A;  4C9A A;  4NGS A;  4C8T A;  4X3R A;  4P4E A;  3D7F A;  2OOT A;  4C9R A;  4OC3 A;  4P4F A;  4MCR A;  4W9Y A;  4C8C A;  3FF3 A;  4C85 A;  4P45 A;  4OC5 A;  3K9T A;  3SJF A;  3S9L A;  3IIB A;  3D7G A;  4LQG A;  4KNG E;  4P4I A;  2XEF A;  3FEC A;  4JZ0 A;  5D29 A;  4C99 A;  4OC2 A;  4P44 A;  2JBK A;  5IR2 A;  4NGR A;  3SJX A;  3KAS A;  2C5Q A;  3EIF A;  5F09 A;  3SJG A;  4C9E A;  4C8P A;  4C8F A;  4NGN A;  3BXM A;  4JYW A;  2XEI A;  4CDJ A;  3I74 A;  3S9N A;  1Y9Z A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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