4J0NA

Crystal structure of a manganese dependent isatin hydrolase
Total Genus 80
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
80
sequence length
261
structure length
261
Chain Sequence
SAQSALSGLGAKLLSGEVEVVDCTGVLGPNTPILQLPPDFAKNTPKVEIHKISEYDSDGPFFAWNWMVLGEHSGTHFDAPHHWITGKDYSDGFTDTLDVQRLIAPVNVIDCSKESAADPDFLLTADLIKAWEAEHGEIGAGEWVVMRTDWDKRAGDEAAFLNADETGPHSPGPTPDAIEYLLSKKIVGWGSQCIGTDAGQAGGMEPPFPAHNLLHRDNCFGLASLANLDKLPAKGAILIAAPLKIERGTGSPIRALALVPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Labrenzia aggregata iam 12614
publication title A proton wire and water channel revealed in the crystal structure of isatin hydrolase.
pubmed doi rcsb
molecule keywords Isatin hydrolase B
total genus 80
structure length 261
sequence length 261
chains with identical sequence B
ec nomenclature ec 3.5.2.20: Isatin hydrolase.
pdb deposition date 2013-01-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04199 Cyclase Putative cyclase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.30.50 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Putative cyclase 4j0nA00
3KRVA 1R61A 4CZ1A 4J0NA 2B0AA 4M8DA 4COBA 4CO9A 4COGA
chains in the Genus database with same CATH superfamily
2EK9A 3ICUA 4P4JA 2DIKA 4W9YA 2JBJA 4OC1A 3FEDA 4P4DA 4OC4A 4JVOA 3SJFA 3T07A 4LQGA 2JBKA 1VBHA 3U1BA 3TLYA 2GP4A 4NGPA 3TYXA 3T05A 3FEEA 2EZAA 4C85A 4OC2A 1J3LA 3C8OA 3EZEA 2OLSA 3EZBA 4P4FA 1Z8LA 1KBLA 3NOJA 4KNGE 2YJTA 1ZYMA 3EIFA 1ZRSA 3D7FA 3TLZA 2EZBA 3SR3A 5D29A 4OC0A 5F1YA 3SJXA 3S9NA 2MP0A 1BXRB 4OC5A 3S9LA 4INJA 4MCSA 3TLBA 1NXJA 2EK8A 1Q5XA 2FM4A 4MJXA 2OOTA 2XEIA 3SJEA 3VTAA 3TLEA 4NGTA 4C99A 4J0NA 1C3OB 1NBWA 3BXMA 3SJGA 4E94A 4C86A 4C9AA 5F9MA 3TLGB 4E5SA 1EZBA 4TJXA 1KC7A 3TLGA 2PVVA 4C9VA 4COGA 1CE8B 2XEGA 3D7DA 3K9TA 2X0SA 4NGSA 5F5XA 2C5QA 2OR4A 4P44A 3T0TA 4NGQA 2D0PA 3KRVA 3FECA 1JDEA 2PVWA 2HI6A 1VI4A 2EZCA 2HROA 1C30B 4CDKA 3I74A 4CZ1A 4EYSA 4CDJA 2D0OA 2HWGA 1JDBC 2C6GA 4OMEA 1A9XB 1M6VB 4IIXA 2PCNA 3RBUA 3T5MA 3S9MA 1ZL0A 3K4IA 4P45A 4C8TA 1XF1A 2C6PA 3TLCA 3D7GA 4NGRA 3KASA 4C8AA 2B0AA 4MI1A 1DIKA 1WVMA 4C8PA 5JVLA 4C9UA 4C8CA 1R61A 2AUNA 4JYWA 4C8FA 3I6SA 4C9EA 3G23A 3BI1A 4NGNA 4YN3A 4MCRA 2XEJA 4P4IA 4TJVA 5K99A 5JYBA 3GJZA 3FF3A 4P4EA 2YJVA 3IWWA 2R82A 1CS0B 1V6CA 4COBA 2AUMA 4JZ0A 4CO9A 5FD8A 1CX8A 4P4BA 4H1HA 1VBGA 1KEEB 1Y9ZA 5IB9A 3EZAA 1T36B 4X3RA 4TWEA 5ELYA 2C6CA 3IIBA 2CIJA 1EZAA 4MCPA 4C8UA 3TLAA 2XEFA 3BHXA 4NGMA 3D7HA 4IIYA 1DE4C 3BI0A 4C9RA 1GGOA 5IR2A 5F09A 4C84A 4M8DA 4MCQA 2E28A 4OC3A
chains in the Genus database with same CATH topology
3KRVA 1R61A 4CZ1A 4J0NA 2B0AA 4M8DA 4COBA 4CO9A 4COGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KRV A;  1R61 A;  4CZ1 A;  4J0N A;  2B0A A;  4M8D A;  4COB A;  4CO9 A;  4COG A; 
#chains in the Genus database with same CATH topology
 2EK9 A;  3ICU A;  4P4J A;  2DIK A;  4W9Y A;  2JBJ A;  4OC1 A;  3FED A;  4P4D A;  4OC4 A;  4JVO A;  3SJF A;  3T07 A;  4LQG A;  2JBK A;  1VBH A;  3U1B A;  3TLY A;  2GP4 A;  4NGP A;  3TYX A;  3T05 A;  3FEE A;  2EZA A;  4C85 A;  4OC2 A;  1J3L A;  3C8O A;  3EZE A;  2OLS A;  3EZB A;  4P4F A;  1Z8L A;  1KBL A;  3NOJ A;  4KNG E;  2YJT A;  1ZYM A;  3EIF A;  1ZRS A;  3D7F A;  3TLZ A;  2EZB A;  3SR3 A;  5D29 A;  4OC0 A;  5F1Y A;  3SJX A;  3S9N A;  2MP0 A;  1BXR B;  4OC5 A;  3S9L A;  4INJ A;  4MCS A;  3TLB A;  1NXJ A;  2EK8 A;  1Q5X A;  2FM4 A;  4MJX A;  2OOT A;  2XEI A;  3SJE A;  3VTA A;  3TLE A;  4NGT A;  4C99 A;  4J0N A;  1C3O B;  1NBW A;  3BXM A;  3SJG A;  4E94 A;  4C86 A;  4C9A A;  5F9M A;  3TLG B;  4E5S A;  1EZB A;  4TJX A;  1KC7 A;  3TLG A;  2PVV A;  4C9V A;  4COG A;  1CE8 B;  2XEG A;  3D7D A;  3K9T A;  2X0S A;  4NGS A;  5F5X A;  2C5Q A;  2OR4 A;  4P44 A;  3T0T A;  4NGQ A;  2D0P A;  3KRV A;  3FEC A;  1JDE A;  2PVW A;  2HI6 A;  1VI4 A;  2EZC A;  2HRO A;  1C30 B;  4CDK A;  3I74 A;  4CZ1 A;  4EYS A;  4CDJ A;  2D0O A;  2HWG A;  1JDB C;  2C6G A;  4OME A;  1A9X B;  1M6V B;  4IIX A;  2PCN A;  3RBU A;  3T5M A;  3S9M A;  1ZL0 A;  3K4I A;  4P45 A;  4C8T A;  1XF1 A;  2C6P A;  3TLC A;  3D7G A;  4NGR A;  3KAS A;  4C8A A;  2B0A A;  4MI1 A;  1DIK A;  1WVM A;  4C8P A;  5JVL A;  4C9U A;  4C8C A;  1R61 A;  2AUN A;  4JYW A;  4C8F A;  3I6S A;  4C9E A;  3G23 A;  3BI1 A;  4NGN A;  4YN3 A;  4MCR A;  2XEJ A;  4P4I A;  4TJV A;  5K99 A;  5JYB A;  3GJZ A;  3FF3 A;  4P4E A;  2YJV A;  3IWW A;  2R82 A;  1CS0 B;  1V6C A;  4COB A;  2AUM A;  4JZ0 A;  4CO9 A;  5FD8 A;  1CX8 A;  4P4B A;  4H1H A;  1VBG A;  1KEE B;  1Y9Z A;  5IB9 A;  3EZA A;  1T36 B;  4X3R A;  4TWE A;  5ELY A;  2C6C A;  3IIB A;  2CIJ A;  1EZA A;  4MCP A;  4C8U A;  3TLA A;  2XEF A;  3BHX A;  4NGM A;  3D7H A;  4IIY A;  1DE4 C;  3BI0 A;  4C9R A;  1GGO A;  5IR2 A;  5F09 A;  4C84 A;  4M8D A;  4MCQ A;  2E28 A;  4OC3 A; 
#chains in the Genus database with same CATH homology
 3KRV A;  1R61 A;  4CZ1 A;  4J0N A;  2B0A A;  4M8D A;  4COB A;  4CO9 A;  4COG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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