4J0NA

Crystal structure of a manganese dependent isatin hydrolase
Total Genus 80
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
80
sequence length
261
structure length
261
Chain Sequence
SAQSALSGLGAKLLSGEVEVVDCTGVLGPNTPILQLPPDFAKNTPKVEIHKISEYDSDGPFFAWNWMVLGEHSGTHFDAPHHWITGKDYSDGFTDTLDVQRLIAPVNVIDCSKESAADPDFLLTADLIKAWEAEHGEIGAGEWVVMRTDWDKRAGDEAAFLNADETGPHSPGPTPDAIEYLLSKKIVGWGSQCIGTDAGQAGGMEPPFPAHNLLHRDNCFGLASLANLDKLPAKGAILIAAPLKIERGTGSPIRALALVPK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Isatin hydrolase B
publication title A proton wire and water channel revealed in the crystal structure of isatin hydrolase.
pubmed doi rcsb
source organism Labrenzia aggregata iam 12614
molecule tags Hydrolase
total genus 80
structure length 261
sequence length 261
chains with identical sequence B
ec nomenclature ec 3.5.2.20: Isatin hydrolase.
pdb deposition date 2013-01-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04199 Cyclase Putative cyclase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.30.50 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Putative cyclase 4j0nA00
4CO9A 4J0NA 4COBA 3KRVA 4COGA 1R61A 4CZ1A 2B0AA 4M8DA
chains in the Genus database with same CATH superfamily
3ICUA 4JYWA 2PVVA 4P45A 5FD8A 2C5QA 3D7DA 1C30B 1NBWA 4INJA 4OC1A 1JDBC 3KRVA 4NGPA 2YJTA 5D29A 4NGSA 1CE8B 3SJGA 2C6CA 2GP4A 2DIKA 3BI1A 3SJXA 2AUNA 5IR2A 4MI1A 3K9TA 3TYXA 3TLCA 2XEJA 3TLAA 3D7GA 3T0TA 2X0SA 3EIFA 2XEFA 4C8UA 1Y9ZA 4KNGE 2C6PA 5F9MA 4TJVA 3I74A 2AUMA 4MCRA 4E94A 4NGRA 4C8CA 3D7FA 4CDKA 3BI0A 1VBGA 3FEDA 3BXMA 1R61A 4CZ1A 3SJFA 4C85A 2D0PA 4C9AA 3FEEA 1ZYMA 4CDJA 4OMEA 4P4FA 1KEEB 1XF1A 4C84A 3T07A 1GGOA 2HWGA 4MCSA 3BHXA 4P4JA 1ZL0A 4M8DA 1J3LA 4COBA 3EZEA 4OC2A 2CIJA 1DE4C 4IIYA 1DIKA 4MJXA 3RBUA 3FF3A 2OR4A 4TJXA 4X3RA 3U1BA 3GJZA 4C8FA 4P4EA 3KASA 3TLGA 4P4IA 4NGMA 4P4DA 4C9EA 1NXJA 4C86A 5F5XA 5JYBA 4C99A 1ZRSA 2EZCA 3TLBA 4OC4A 3FECA 3S9NA 3EZBA 4NGNA 2OLSA 1M6VB 2E28A 4JVOA 3VTAA 3T5MA 3TLEA 4EYSA 2R82A 2XEGA 3SR3A 2OOTA 4C9UA 4J0NA 4MCQA 3S9MA 1VBHA 3NOJA 4H1HA 1V6CA 1A9XB 3D7HA 4NGQA 1EZAA 2HI6A 4CO9A 3S9LA 1VI4A 4NGTA 2YJVA 4OC5A 4C9RA 2D0OA 3I6SA 4OC3A 1Q5XA 2C6GA 2JBKA 1KC7A 2MP0A 3IIBA 4P44A 2EK9A 3TLZA 1KBLA 2FM4A 5IB9A 2XEIA 4TWEA 1Z8LA 3SJEA 1CS0B 3T05A 3K4IA 1BXRB 1WVMA 2EZAA 2HROA 1C3OB 3TLGB 4OC0A 1EZBA 2PVWA 4MCPA 4W9YA 2EZBA 5F09A 3C8OA 4C8AA 4E5SA 1T36B 1JDEA 4JZ0A 5ELYA 4C8TA 5K99A 2JBJA 4COGA 4LQGA 4C9VA 5JVLA 5F1YA 2PCNA 2B0AA 3G23A 3EZAA 3TLYA 4P4BA 1CX8A 4IIXA 2EK8A 3IWWA 4C8PA 4YN3A
chains in the Genus database with same CATH topology
4CO9A 4J0NA 4COBA 3KRVA 4COGA 1R61A 4CZ1A 2B0AA 4M8DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CO9 A;  4J0N A;  4COB A;  3KRV A;  4COG A;  1R61 A;  4CZ1 A;  2B0A A;  4M8D A; 
#chains in the Genus database with same CATH topology
 3ICU A;  4JYW A;  2PVV A;  4P45 A;  5FD8 A;  2C5Q A;  3D7D A;  1C30 B;  1NBW A;  4INJ A;  4OC1 A;  1JDB C;  3KRV A;  4NGP A;  2YJT A;  5D29 A;  4NGS A;  1CE8 B;  3SJG A;  2C6C A;  2GP4 A;  2DIK A;  3BI1 A;  3SJX A;  2AUN A;  5IR2 A;  4MI1 A;  3K9T A;  3TYX A;  3TLC A;  2XEJ A;  3TLA A;  3D7G A;  3T0T A;  2X0S A;  3EIF A;  2XEF A;  4C8U A;  1Y9Z A;  4KNG E;  2C6P A;  5F9M A;  4TJV A;  3I74 A;  2AUM A;  4MCR A;  4E94 A;  4NGR A;  4C8C A;  3D7F A;  4CDK A;  3BI0 A;  1VBG A;  3FED A;  3BXM A;  1R61 A;  4CZ1 A;  3SJF A;  4C85 A;  2D0P A;  4C9A A;  3FEE A;  1ZYM A;  4CDJ A;  4OME A;  4P4F A;  1KEE B;  1XF1 A;  4C84 A;  3T07 A;  1GGO A;  2HWG A;  4MCS A;  3BHX A;  4P4J A;  1ZL0 A;  4M8D A;  1J3L A;  4COB A;  3EZE A;  4OC2 A;  2CIJ A;  1DE4 C;  4IIY A;  1DIK A;  4MJX A;  3RBU A;  3FF3 A;  2OR4 A;  4TJX A;  4X3R A;  3U1B A;  3GJZ A;  4C8F A;  4P4E A;  3KAS A;  3TLG A;  4P4I A;  4NGM A;  4P4D A;  4C9E A;  1NXJ A;  4C86 A;  5F5X A;  5JYB A;  4C99 A;  1ZRS A;  2EZC A;  3TLB A;  4OC4 A;  3FEC A;  3S9N A;  3EZB A;  4NGN A;  2OLS A;  1M6V B;  2E28 A;  4JVO A;  3VTA A;  3T5M A;  3TLE A;  4EYS A;  2R82 A;  2XEG A;  3SR3 A;  2OOT A;  4C9U A;  4J0N A;  4MCQ A;  3S9M A;  1VBH A;  3NOJ A;  4H1H A;  1V6C A;  1A9X B;  3D7H A;  4NGQ A;  1EZA A;  2HI6 A;  4CO9 A;  3S9L A;  1VI4 A;  4NGT A;  2YJV A;  4OC5 A;  4C9R A;  2D0O A;  3I6S A;  4OC3 A;  1Q5X A;  2C6G A;  2JBK A;  1KC7 A;  2MP0 A;  3IIB A;  4P44 A;  2EK9 A;  3TLZ A;  1KBL A;  2FM4 A;  5IB9 A;  2XEI A;  4TWE A;  1Z8L A;  3SJE A;  1CS0 B;  3T05 A;  3K4I A;  1BXR B;  1WVM A;  2EZA A;  2HRO A;  1C3O B;  3TLG B;  4OC0 A;  1EZB A;  2PVW A;  4MCP A;  4W9Y A;  2EZB A;  5F09 A;  3C8O A;  4C8A A;  4E5S A;  1T36 B;  1JDE A;  4JZ0 A;  5ELY A;  4C8T A;  5K99 A;  2JBJ A;  4COG A;  4LQG A;  4C9V A;  5JVL A;  5F1Y A;  2PCN A;  2B0A A;  3G23 A;  3EZA A;  3TLY A;  4P4B A;  1CX8 A;  4IIX A;  2EK8 A;  3IWW A;  4C8P A;  4YN3 A; 
#chains in the Genus database with same CATH homology
 4CO9 A;  4J0N A;  4COB A;  3KRV A;  4COG A;  1R61 A;  4CZ1 A;  2B0A A;  4M8D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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