4C9EA

Mouse znrf3 ectodomain in complex with xenopus rspo2 fu1-fu2 (seleno met) crystal form ii
Total Genus 37
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
153
structure length
153
Chain Sequence
KETAFVEVVLFESSPSGDYTTHTTGLTGRFSRAGAMLSAEGEIVQMHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Structural and Molecular Basis of Znrf3/Rnf43 Transmembrane Ubiquitin Ligase Inhibition by the Wnt Agonist R-Spondin.
pubmed doi rcsb
molecule tags Ligase/signaling protein
source organism Mus musculus
molecule keywords E3 UBIQUITIN-PROTEIN LIGASE ZNRF3
total genus 37
structure length 153
sequence length 153
chains with identical sequence C, E, G
ec nomenclature ec 2.3.2.27: RING-type E3 ubiquitin transferase.
pdb deposition date 2013-10-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF18212 ZNRF_3_ecto ZNRF-3 Ectodomain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.50.30.30 Alpha Beta 3-Layer(bba) Sandwich Glucose Oxidase; domain 1 Glucose Oxidase; domain 1 4c9eA00
2CIJA 3I6SA 3D7GA 3FECA 4X3RA 2EK9A 3FF3A 4LQGA 3BI0A 2PVWA 2C6GA 4C8FA 4C8PA 4P4IA 4TWEA 4OC0A 2XEGA 4NGRA 4NGTA 2XEJA 3ICUA 2JBJA 1CX8A 3FEEA 4P4JA 3RBUA 4C86A 4C9EA 4NGPA 3SJFA 4C8TA 4C8CA 4P4BA 4CDKA 4OC2A 4C84A 4C99A 4CDJA 4TJVA 4JZ0A 1XF1A 3SJEA 3IWWA 4P45A 3KASA 2C6PA 4OMEA 4MCSA 4OC5A 4OC1A 4NGQA 4C9VA 2EK8A 3S9MA 1V6CA 4YN3A 4P4DA 4MCRA 3VTAA 4P4FA 2XEFA 5D29A 3SJGA 4C9RA 5IB9A 3I74A 4C8AA 4MCQA 4KNGE 4W9YA 4C85A 3IIBA 4P44A 4TJXA 4OC3A 1Z8LA 2XEIA 1Y9ZA 5ELYA 4C9UA 3SJXA 1DE4C 1WVMA 4JYWA 4NGSA 3EIFA 4OC4A 4MCPA 2PVVA 2JBKA 2C6CA 3S9NA 4P4EA 2OOTA 3BXMA 3D7DA 3BI1A 2OR4A 4NGMA 4C8UA 3D7FA 4NGNA 3S9LA 5F09A 3FEDA 3D7HA 3BHXA 4C9AA
chains in the Genus database with same CATH superfamily
2CIJA 3I6SA 1ZRSA 3TLGA 3D7GA 3FECA 2DIKA 2EK9A 4X3RA 5F9MA 3TLGB 2YJTA 2PCNA 3FF3A 4INJA 3U1BA 4LQGA 3BI0A 5FD8A 2EZCA 2PVWA 1NXJA 2C6GA 4IIXA 4C8FA 4C8PA 1EZBA 4P4IA 4TWEA 4OC0A 2XEGA 3NOJA 3T0TA 5F5XA 1T36B 4NGRA 4NGTA 3SR3A 2XEJA 4E5SA 3ICUA 2JBJA 1CX8A 4MI1A 3FEEA 4P4JA 3RBUA 4C86A 4C9EA 4NGPA 3SJFA 4C8TA 4C8CA 1VI4A 4COGA 4P4BA 5JYBA 4CDKA 1C3OB 2D0PA 3K9TA 4OC2A 4C84A 5IR2A 4C99A 4CDJA 4TJVA 3GJZA 4JZ0A 1XF1A 1VBHA 2MP0A 4JVOA 3SJEA 3TLZA 1KC7A 3IWWA 4COBA 3C8OA 1GGOA 2C5QA 1Q5XA 4P45A 3KASA 1ZL0A 2C6PA 2AUMA 4IIYA 2HWGA 3EZEA 4MCSA 4OMEA 2R82A 4OC5A 4OC1A 4NGQA 4C9VA 2EK8A 1BXRB 3S9MA 3TLYA 1JDBC 1V6CA 1CS0B 4YN3A 3EZAA 4P4DA 4MCRA 3VTAA 4P4FA 4CO9A 2XEFA 5D29A 4MJXA 1ZYMA 3SJGA 1DIKA 4C9RA 5IB9A 3K4IA 3I74A 3G23A 4C8AA 4MCQA 2EZBA 1M6VB 1VBGA 4KNGE 4W9YA 4C85A 2OLSA 3IIBA 4P44A 2B0AA 5JVLA 1R61A 4TJXA 4OC3A 1A9XB 4M8DA 1Z8LA 4EYSA 3EZBA 2XEIA 1KEEB 1Y9ZA 2YJVA 1KBLA 5ELYA 4C9UA 4E94A 3SJXA 1DE4C 1WVMA 3T07A 4J0NA 4JYWA 2HROA 4NGSA 3TYXA 3EIFA 4H1HA 1C30B 2HI6A 3TLAA 2EZAA 3KRVA 3TLCA 4OC4A 1CE8B 1NBWA 4MCPA 2PVVA 2JBKA 2X0SA 5F1YA 2C6CA 5K99A 3S9NA 2AUNA 2FM4A 4P4EA 2E28A 2OOTA 2GP4A 3BXMA 3D7DA 3TLBA 3BI1A 1JDEA 2D0OA 2OR4A 3T05A 4NGMA 4C8UA 3D7FA 1J3LA 4NGNA 3T5MA 5F09A 3S9LA 3FEDA 4CZ1A 3TLEA 1EZAA 3D7HA 3BHXA 4C9AA
chains in the Genus database with same CATH topology
2CIJA 3I6SA 3D7GA 3FECA 4X3RA 2EK9A 3FF3A 4LQGA 3BI0A 2PVWA 2C6GA 4C8FA 4C8PA 4P4IA 4TWEA 4OC0A 2XEGA 4NGRA 4NGTA 2XEJA 3ICUA 2JBJA 1CX8A 3FEEA 4P4JA 3RBUA 4C86A 4C9EA 4NGPA 3SJFA 4C8TA 4C8CA 4P4BA 4CDKA 3K9TA 4OC2A 4C84A 5IR2A 4C99A 4CDJA 4TJVA 4JZ0A 1XF1A 3SJEA 3IWWA 2C5QA 4P45A 3KASA 2C6PA 4OMEA 4MCSA 4OC5A 4OC1A 4NGQA 4C9VA 2EK8A 3S9MA 1V6CA 4YN3A 4P4DA 4MCRA 3VTAA 4P4FA 2XEFA 5D29A 3SJGA 4C9RA 5IB9A 3I74A 4C8AA 4MCQA 4KNGE 4W9YA 4C85A 3IIBA 4P44A 4TJXA 4OC3A 1Z8LA 2XEIA 1Y9ZA 5ELYA 4C9UA 3SJXA 1DE4C 1WVMA 4JYWA 4NGSA 3EIFA 4OC4A 4MCPA 2PVVA 2JBKA 2C6CA 3S9NA 4P4EA 2OOTA 2GP4A 3BXMA 3D7DA 3BI1A 2OR4A 4NGMA 4C8UA 3D7FA 4NGNA 3S9LA 5F09A 3FEDA 3D7HA 3BHXA 4C9AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CIJ A;  3I6S A;  3D7G A;  3FEC A;  4X3R A;  2EK9 A;  3FF3 A;  4LQG A;  3BI0 A;  2PVW A;  2C6G A;  4C8F A;  4C8P A;  4P4I A;  4TWE A;  4OC0 A;  2XEG A;  4NGR A;  4NGT A;  2XEJ A;  3ICU A;  2JBJ A;  1CX8 A;  3FEE A;  4P4J A;  3RBU A;  4C86 A;  4C9E A;  4NGP A;  3SJF A;  4C8T A;  4C8C A;  4P4B A;  4CDK A;  4OC2 A;  4C84 A;  4C99 A;  4CDJ A;  4TJV A;  4JZ0 A;  1XF1 A;  3SJE A;  3IWW A;  4P45 A;  3KAS A;  2C6P A;  4OME A;  4MCS A;  4OC5 A;  4OC1 A;  4NGQ A;  4C9V A;  2EK8 A;  3S9M A;  1V6C A;  4YN3 A;  4P4D A;  4MCR A;  3VTA A;  4P4F A;  2XEF A;  5D29 A;  3SJG A;  4C9R A;  5IB9 A;  3I74 A;  4C8A A;  4MCQ A;  4KNG E;  4W9Y A;  4C85 A;  3IIB A;  4P44 A;  4TJX A;  4OC3 A;  1Z8L A;  2XEI A;  1Y9Z A;  5ELY A;  4C9U A;  3SJX A;  1DE4 C;  1WVM A;  4JYW A;  4NGS A;  3EIF A;  4OC4 A;  4MCP A;  2PVV A;  2JBK A;  2C6C A;  3S9N A;  4P4E A;  2OOT A;  3BXM A;  3D7D A;  3BI1 A;  2OR4 A;  4NGM A;  4C8U A;  3D7F A;  4NGN A;  3S9L A;  5F09 A;  3FED A;  3D7H A;  3BHX A;  4C9A A; 
#chains in the Genus database with same CATH topology
 2CIJ A;  3I6S A;  1ZRS A;  3TLG A;  3D7G A;  3FEC A;  2DIK A;  2EK9 A;  4X3R A;  5F9M A;  3TLG B;  2YJT A;  2PCN A;  3FF3 A;  4INJ A;  3U1B A;  4LQG A;  3BI0 A;  5FD8 A;  2EZC A;  2PVW A;  1NXJ A;  2C6G A;  4IIX A;  4C8F A;  4C8P A;  1EZB A;  4P4I A;  4TWE A;  4OC0 A;  2XEG A;  3NOJ A;  3T0T A;  5F5X A;  1T36 B;  4NGR A;  4NGT A;  3SR3 A;  2XEJ A;  4E5S A;  3ICU A;  2JBJ A;  1CX8 A;  4MI1 A;  3FEE A;  4P4J A;  3RBU A;  4C86 A;  4C9E A;  4NGP A;  3SJF A;  4C8T A;  4C8C A;  1VI4 A;  4COG A;  4P4B A;  5JYB A;  4CDK A;  1C3O B;  2D0P A;  3K9T A;  4OC2 A;  4C84 A;  5IR2 A;  4C99 A;  4CDJ A;  4TJV A;  3GJZ A;  4JZ0 A;  1XF1 A;  1VBH A;  2MP0 A;  4JVO A;  3SJE A;  3TLZ A;  1KC7 A;  3IWW A;  4COB A;  3C8O A;  1GGO A;  2C5Q A;  1Q5X A;  4P45 A;  3KAS A;  1ZL0 A;  2C6P A;  2AUM A;  4IIY A;  2HWG A;  3EZE A;  4MCS A;  4OME A;  2R82 A;  4OC5 A;  4OC1 A;  4NGQ A;  4C9V A;  2EK8 A;  1BXR B;  3S9M A;  3TLY A;  1JDB C;  1V6C A;  1CS0 B;  4YN3 A;  3EZA A;  4P4D A;  4MCR A;  3VTA A;  4P4F A;  4CO9 A;  2XEF A;  5D29 A;  4MJX A;  1ZYM A;  3SJG A;  1DIK A;  4C9R A;  5IB9 A;  3K4I A;  3I74 A;  3G23 A;  4C8A A;  4MCQ A;  2EZB A;  1M6V B;  1VBG A;  4KNG E;  4W9Y A;  4C85 A;  2OLS A;  3IIB A;  4P44 A;  2B0A A;  5JVL A;  1R61 A;  4TJX A;  4OC3 A;  1A9X B;  4M8D A;  1Z8L A;  4EYS A;  3EZB A;  2XEI A;  1KEE B;  1Y9Z A;  2YJV A;  1KBL A;  5ELY A;  4C9U A;  4E94 A;  3SJX A;  1DE4 C;  1WVM A;  3T07 A;  4J0N A;  4JYW A;  2HRO A;  4NGS A;  3TYX A;  3EIF A;  4H1H A;  1C30 B;  2HI6 A;  3TLA A;  2EZA A;  3KRV A;  3TLC A;  4OC4 A;  1CE8 B;  1NBW A;  4MCP A;  2PVV A;  2JBK A;  2X0S A;  5F1Y A;  2C6C A;  5K99 A;  3S9N A;  2AUN A;  2FM4 A;  4P4E A;  2E28 A;  2OOT A;  2GP4 A;  3BXM A;  3D7D A;  3TLB A;  3BI1 A;  1JDE A;  2D0O A;  2OR4 A;  3T05 A;  4NGM A;  4C8U A;  3D7F A;  1J3L A;  4NGN A;  3T5M A;  5F09 A;  3S9L A;  3FED A;  4CZ1 A;  3TLE A;  1EZA A;  3D7H A;  3BHX A;  4C9A A; 
#chains in the Genus database with same CATH homology
 2CIJ A;  3I6S A;  3D7G A;  3FEC A;  4X3R A;  2EK9 A;  3FF3 A;  4LQG A;  3BI0 A;  2PVW A;  2C6G A;  4C8F A;  4C8P A;  4P4I A;  4TWE A;  4OC0 A;  2XEG A;  4NGR A;  4NGT A;  2XEJ A;  3ICU A;  2JBJ A;  1CX8 A;  3FEE A;  4P4J A;  3RBU A;  4C86 A;  4C9E A;  4NGP A;  3SJF A;  4C8T A;  4C8C A;  4P4B A;  4CDK A;  3K9T A;  4OC2 A;  4C84 A;  5IR2 A;  4C99 A;  4CDJ A;  4TJV A;  4JZ0 A;  1XF1 A;  3SJE A;  3IWW A;  2C5Q A;  4P45 A;  3KAS A;  2C6P A;  4OME A;  4MCS A;  4OC5 A;  4OC1 A;  4NGQ A;  4C9V A;  2EK8 A;  3S9M A;  1V6C A;  4YN3 A;  4P4D A;  4MCR A;  3VTA A;  4P4F A;  2XEF A;  5D29 A;  3SJG A;  4C9R A;  5IB9 A;  3I74 A;  4C8A A;  4MCQ A;  4KNG E;  4W9Y A;  4C85 A;  3IIB A;  4P44 A;  4TJX A;  4OC3 A;  1Z8L A;  2XEI A;  1Y9Z A;  5ELY A;  4C9U A;  3SJX A;  1DE4 C;  1WVM A;  4JYW A;  4NGS A;  3EIF A;  4OC4 A;  4MCP A;  2PVV A;  2JBK A;  2C6C A;  3S9N A;  4P4E A;  2OOT A;  2GP4 A;  3BXM A;  3D7D A;  3BI1 A;  2OR4 A;  4NGM A;  4C8U A;  3D7F A;  4NGN A;  3S9L A;  5F09 A;  3FED A;  3D7H A;  3BHX A;  4C9A A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...