2G6GA

Crystal structure of mlta from neisseria gonorrhoeae
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
410
structure length
405
Chain Sequence
PDTSVINGPDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
pubmed doi rcsb
molecule tags Hydrolase
source organism Neisseria gonorrhoeae fa 1090
molecule keywords GNA33
total genus 95
structure length 405
sequence length 410
ec nomenclature ec 3.2.1.-:
pdb deposition date 2006-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 2g6gA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 2g6gA02
1HD5A 2BH0A 3CZBA 2AE0X 2GAEA 3X2PA 3SUMA 3X2OA 2PI8A 5GLXA 3D30A 4ENGA 3M3GA 1BW4A 2PICA 2ENGA 5GM9A 4JP7A 4JJOA 3X2LA 3X2JA 4L48A 3ENGA 4JP6A 3SUJA 1OA7A 4FG2A 3X2MA 3X2KA 4FFTA 4FG4A 1N10A 5GLYA 3X2NA 4AVRA 1WC2A 3X2GA 1BW3A 1OA9A 3X2HA 5H4UA 3X2IA 2KQAA 2G5DA 2PJJA 2G6GA 1L8FA 3SULA 2HCZX 2PNWA 3SUKA 4JCWA 4FERA 4ZM7A 4JS7A
chains in the Genus database with same CATH superfamily
1VHYA 3DMRA 2GAEA 3GTPA 2A6HD 3HU3A 4CRZA 2PJHB 2IV2X 1VHKA 2JIQA 4JYZA 3DLLS 2PI8A 2RD2A 1QDNA 5T5ID 4ENGA 2C45A 3TM7B 1Y1WA 2JA7A 1IW7D 2R7ZA 1BW4A 3W2VB 3X2LA 1R9TA 5DYGA 4JJOA 1CZ5A 1EUQA 1UHDA 1B75A 3ENGA 5FTKA 4WFNS 1OA7A 2NVYA 1ZC1A 2JIRA 3TIWA 2NYAA 2B63A 5B6CA 4U67S 1SIWA 3X2NA 1WC2A 1UHEA 2E2HA 4H3SA 1H5NA 4GA5A 3GTQA 4AAYA 3X2IA 2KQAA 1FDIA 1V6ZA 5GAEW 3SULA 1SMYD 3W2WB 3PLXB 1KQFA 1H0HA 1TWAA 4IOAS 3CZBA 2AE0X 1GTRA 3GTMA 5FTLA 1DMSA 3SUMA 1PQEA 1AW8B 2YU9A 2ZJQS 2V45A 1WLFA 5GLXA 4H4KA 4J3CA 3M3GA 2JA5A 2EGWA 5C1BA 2JIMA 1EUYA 2NAPA 1ZJWA 1QTQA 2VPYA 4GA6A 4CS0A 1PYUB 4L48A 4NOHA 3J7ZV 3GTKA 2R93A 1KQGA 4FG2A 3CQZA 3PIOS 3X2MA 3HU1A 1E18A 2JIPA 4FFTA 3X2KA 4WFAS 3HU2A 1G8JA 1PQHA 1TWCA 5FTJA 1DFUP 4AVRA 1EXDA 2WAQA 1BW3A 5FTNA 1PYQA 1FDOA 1OA9A 2VPWA 4RV0A 5H4UA 1I3QA 4P2BA 3QWZA 2JIOA 2WB1A 2G6GA 1NYLA 4V194 3FKIA 4QIWA 1E60A 2VPZA 1Y5IA 5JVGS 1K83A 4FERA 1WCMA 4AYBA 4WFBS 1O0CA 3GTLA 3CF2A 3X2PA 1PT1A 2YUJA 5GAHW 2RE8A 1FEUA 1O0BA 5DM6S 4E8BA 1OGYA 1NXZA 3D30A 1E61A 1PQFA 1EU1A 4KDLA 2JA6A 5GAGW 1CZ4A 2DMRA 1TWGA 2ENGA 2PICA 2A68D 1VC3B 4JP7A 1I50A 4JP6A 4AOKB 2O5JD 2HZ7A 1E32A 4D7ZB 1Z85A 5GADW 2A69D 3GTOA 5JVHS 2VPXA 1N10A 4UY88 5BNZA 2V3VA 2NWAA 1AA6A 4CRYG 3AIIA 3CF5S 4C2MA 3GTJA 3IR6A 3IR7A 5T5MD 3X2GA 1QRTA 2PMZA 3O5AA 1CR5A 5DM7S 1YNND 3X2HA 2EGVA 2KI8A 4AONB 1TWHA 4L69A 4IO9S 1YLEA 2Z0YA 5HL7S 1L8FA 1PT0A 1Y4ZA 2HCZX 2BE5D 4KDIA 5GLFA 3SUKA 4JXZA 2A6ED 1TWFA 4JCWA 2VUMA 3ML1A 1G8KA 2CX8A 4JS7A 1QRUA 4WF9S 1HD5A 3HKZA 2BH0A 2CW0D 3KW2A 3X2OA 5FTMA 2ZJPS 4DMRA 4KO8A 5EPPA 2E2IA 1E5VA 2Y0SA 1UDXA 1PPYA 4AZDA 2R92A 1SFOA 5GM9A 3X2JA 3QQ8A 3OUGA 3SUJA 1DMRA 3QC8A 3GTGA 1S3SA 4KLNA 3H0GA 4FG4A 1GTSA 2E7ZA 5GLYA 1QRSA 1Q16A 2EEOB 4IOCS 2ZJRS 4KODA 5DYIA 2NVXA 1YNJD 5C18A 4JXXA 4WCES 1D6KA 3QQ7A 3IR5A 1TMOA 2G5DA 2PJJA 1R27A 2PNWA 1Y1VA 3PIPS 1R7RA 1QCSA 3X1LB 1ZYRD 4ZM7A 5IZNA
chains in the Genus database with same CATH topology
3DMRA 2GAEA 3GTPA 2A6HD 3HU3A 4CRZA 2PJHB 2IV2X 2JIQA 2PI8A 1QDNA 4ENGA 5T5ID 2C45A 1BW4A 3TM7B 1Y1WA 1IW7D 2R7ZA 2JA7A 3X2LA 1R9TA 5DYGA 4JJOA 1CZ5A 1UHDA 3ENGA 5FTKA 1OA7A 2NVYA 1ZC1A 2JIRA 3TIWA 2NYAA 2B63A 5B6CA 1SIWA 3X2NA 1WC2A 1UHEA 1R7RA 2E2HA 1H5NA 4GA5A 3GTQA 4AAYA 3X2IA 2KQAA 1FDIA 3SULA 1SMYD 3PLXB 1KQFA 1H0HA 1TWAA 3CZBA 2AE0X 3GTMA 5FTLA 1DMSA 3SUMA 1PQEA 1AW8B 2YU9A 2V45A 1WLFA 5GLXA 3M3GA 2JA5A 5C1BA 2JIMA 2NAPA 2VPYA 4GA6A 4CS0A 1PYUB 4L48A 4NOHA 3GTKA 2R93A 1KQGA 4FG2A 3CQZA 3X2MA 3X2KA 1E18A 4FFTA 2JIPA 3HU1A 3HU2A 1G8JA 1PQHA 1TWCA 5FTJA 4AVRA 2WAQA 1BW3A 5FTNA 1PYQA 1OA9A 1FDOA 2VPWA 4RV0A 5H4UA 1I3QA 3QWZA 2JIOA 2WB1A 2G6GA 3FKIA 4QIWA 1E60A 2VPZA 1Y5IA 1K83A 4FERA 1WCMA 4AYBA 3GTLA 3CF2A 3X2PA 1PT1A 2YUJA 1OGYA 3D30A 1E61A 2JA6A 1EU1A 4KDLA 2PICA 2ENGA 1CZ4A 4JP7A 1TWGA 2A68D 1VC3B 2DMRA 1I50A 4JP6A 4AOKB 2O5JD 1E32A 4D7ZB 2A69D 3GTOA 2VPXA 1N10A 2V3VA 1AA6A 4CRYG 4C2MA 3GTJA 3IR6A 3X2GA 3IR7A 5T5MD 2PMZA 3O5AA 1CR5A 3X2HA 1YNND 2KI8A 4AONB 1TWHA 1YLEA 1L8FA 1PT0A 2HCZX 3SUKA 2BE5D 1Y4ZA 4KDIA 5GLFA 4JCWA 1TWFA 2A6ED 2VUMA 3ML1A 1G8KA 4JS7A 1HD5A 3HKZA 2BH0A 2CW0D 3X2OA 5FTMA 4DMRA 4KO8A 5EPPA 2E2IA 1E5VA 2Y0SA 1PPYA 4AZDA 2R92A 1SFOA 5GM9A 3X2JA 3QQ8A 3SUJA 3OUGA 1DMRA 3QC8A 3GTGA 1S3SA 4KLNA 4FG4A 3H0GA 5GLYA 2E7ZA 1Q16A 2EEOB 4KODA 5DYIA 2NVXA 1YNJD 5C18A 3QQ7A 3IR5A 2G5DA 1TMOA 2PJJA 1R27A 2PNWA 1Y1VA 1PQFA 1QCSA 1ZYRD 4ZM7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HD5 A;  2BH0 A;  3CZB A;  2AE0 X;  2GAE A;  3X2P A;  3SUM A;  3X2O A;  2PI8 A;  5GLX A;  3D30 A;  4ENG A;  3M3G A;  1BW4 A;  2PIC A;  2ENG A;  5GM9 A;  4JP7 A;  4JJO A;  3X2L A;  3X2J A;  4L48 A;  3ENG A;  4JP6 A;  3SUJ A;  1OA7 A;  4FG2 A;  3X2M A;  3X2K A;  4FFT A;  4FG4 A;  1N10 A;  5GLY A;  3X2N A;  4AVR A;  1WC2 A;  3X2G A;  1BW3 A;  1OA9 A;  3X2H A;  5H4U A;  3X2I A;  2KQA A;  2G5D A;  2PJJ A;  2G6G A;  1L8F A;  3SUL A;  2HCZ X;  2PNW A;  3SUK A;  4JCW A;  4FER A;  4ZM7 A;  4JS7 A; 
#chains in the Genus database with same CATH topology
 1VHY A;  3DMR A;  2GAE A;  3GTP A;  2A6H D;  3HU3 A;  4CRZ A;  2PJH B;  2IV2 X;  1VHK A;  2JIQ A;  4JYZ A;  3DLL S;  2PI8 A;  2RD2 A;  1QDN A;  5T5I D;  4ENG A;  2C45 A;  3TM7 B;  1Y1W A;  2JA7 A;  1IW7 D;  2R7Z A;  1BW4 A;  3W2V B;  3X2L A;  1R9T A;  5DYG A;  4JJO A;  1CZ5 A;  1EUQ A;  1UHD A;  1B75 A;  3ENG A;  5FTK A;  4WFN S;  1OA7 A;  2NVY A;  1ZC1 A;  2JIR A;  3TIW A;  2NYA A;  2B63 A;  5B6C A;  4U67 S;  1SIW A;  3X2N A;  1WC2 A;  1UHE A;  2E2H A;  4H3S A;  1H5N A;  4GA5 A;  3GTQ A;  4AAY A;  3X2I A;  2KQA A;  1FDI A;  1V6Z A;  5GAE W;  3SUL A;  1SMY D;  3W2W B;  3PLX B;  1KQF A;  1H0H A;  1TWA A;  4IOA S;  3CZB A;  2AE0 X;  1GTR A;  3GTM A;  5FTL A;  1DMS A;  3SUM A;  1PQE A;  1AW8 B;  2YU9 A;  2ZJQ S;  2V45 A;  1WLF A;  5GLX A;  4H4K A;  4J3C A;  3M3G A;  2JA5 A;  2EGW A;  5C1B A;  2JIM A;  1EUY A;  2NAP A;  1ZJW A;  1QTQ A;  2VPY A;  4GA6 A;  4CS0 A;  1PYU B;  4L48 A;  4NOH A;  3J7Z V;  3GTK A;  2R93 A;  1KQG A;  4FG2 A;  3CQZ A;  3PIO S;  3X2M A;  3HU1 A;  1E18 A;  2JIP A;  4FFT A;  3X2K A;  4WFA S;  3HU2 A;  1G8J A;  1PQH A;  1TWC A;  5FTJ A;  1DFU P;  4AVR A;  1EXD A;  2WAQ A;  1BW3 A;  5FTN A;  1PYQ A;  1FDO A;  1OA9 A;  2VPW A;  4RV0 A;  5H4U A;  1I3Q A;  4P2B A;  3QWZ A;  2JIO A;  2WB1 A;  2G6G A;  1NYL A;  4V19 4;  3FKI A;  4QIW A;  1E60 A;  2VPZ A;  1Y5I A;  5JVG S;  1K83 A;  4FER A;  1WCM A;  4AYB A;  4WFB S;  1O0C A;  3GTL A;  3CF2 A;  3X2P A;  1PT1 A;  2YUJ A;  5GAH W;  2RE8 A;  1FEU A;  1O0B A;  5DM6 S;  4E8B A;  1OGY A;  1NXZ A;  3D30 A;  1E61 A;  1PQF A;  1EU1 A;  4KDL A;  2JA6 A;  5GAG W;  1CZ4 A;  2DMR A;  1TWG A;  2ENG A;  2PIC A;  2A68 D;  1VC3 B;  4JP7 A;  1I50 A;  4JP6 A;  4AOK B;  2O5J D;  2HZ7 A;  1E32 A;  4D7Z B;  1Z85 A;  5GAD W;  2A69 D;  3GTO A;  5JVH S;  2VPX A;  1N10 A;  4UY8 8;  5BNZ A;  2V3V A;  2NWA A;  1AA6 A;  4CRY G;  3AII A;  3CF5 S;  4C2M A;  3GTJ A;  3IR6 A;  3IR7 A;  5T5M D;  3X2G A;  1QRT A;  2PMZ A;  3O5A A;  1CR5 A;  5DM7 S;  1YNN D;  3X2H A;  2EGV A;  2KI8 A;  4AON B;  1TWH A;  4L69 A;  4IO9 S;  1YLE A;  2Z0Y A;  5HL7 S;  1L8F A;  1PT0 A;  1Y4Z A;  2HCZ X;  2BE5 D;  4KDI A;  5GLF A;  3SUK A;  4JXZ A;  2A6E D;  1TWF A;  4JCW A;  2VUM A;  3ML1 A;  1G8K A;  2CX8 A;  4JS7 A;  1QRU A;  4WF9 S;  1HD5 A;  3HKZ A;  2BH0 A;  2CW0 D;  3KW2 A;  3X2O A;  5FTM A;  2ZJP S;  4DMR A;  4KO8 A;  5EPP A;  2E2I A;  1E5V A;  2Y0S A;  1UDX A;  1PPY A;  4AZD A;  2R92 A;  1SFO A;  5GM9 A;  3X2J A;  3QQ8 A;  3OUG A;  3SUJ A;  1DMR A;  3QC8 A;  3GTG A;  1S3S A;  4KLN A;  3H0G A;  4FG4 A;  1GTS A;  2E7Z A;  5GLY A;  1QRS A;  1Q16 A;  2EEO B;  4IOC S;  2ZJR S;  4KOD A;  5DYI A;  2NVX A;  1YNJ D;  5C18 A;  4JXX A;  4WCE S;  1D6K A;  3QQ7 A;  3IR5 A;  1TMO A;  2G5D A;  2PJJ A;  1R27 A;  2PNW A;  1Y1V A;  3PIP S;  1R7R A;  1QCS A;  3X1L B;  1ZYR D;  4ZM7 A;  5IZN A; 
#chains in the Genus database with same CATH homology
 3DMR A;  2GAE A;  3GTP A;  2A6H D;  3HU3 A;  4CRZ A;  2PJH B;  2IV2 X;  2JIQ A;  2PI8 A;  1QDN A;  4ENG A;  5T5I D;  2C45 A;  1BW4 A;  3TM7 B;  1Y1W A;  1IW7 D;  2R7Z A;  2JA7 A;  3X2L A;  1R9T A;  5DYG A;  4JJO A;  1CZ5 A;  1UHD A;  3ENG A;  5FTK A;  1OA7 A;  2NVY A;  1ZC1 A;  2JIR A;  3TIW A;  2NYA A;  2B63 A;  5B6C A;  1SIW A;  3X2N A;  1WC2 A;  1UHE A;  1R7R A;  2E2H A;  1H5N A;  4GA5 A;  3GTQ A;  4AAY A;  3X2I A;  2KQA A;  1FDI A;  3SUL A;  1SMY D;  3PLX B;  1KQF A;  1H0H A;  1TWA A;  3CZB A;  2AE0 X;  3GTM A;  5FTL A;  1DMS A;  3SUM A;  1PQE A;  1AW8 B;  2YU9 A;  2V45 A;  1WLF A;  5GLX A;  3M3G A;  2JA5 A;  5C1B A;  2JIM A;  2NAP A;  2VPY A;  4GA6 A;  4CS0 A;  1PYU B;  4L48 A;  4NOH A;  3GTK A;  2R93 A;  1KQG A;  4FG2 A;  3CQZ A;  3X2M A;  3X2K A;  1E18 A;  4FFT A;  2JIP A;  3HU1 A;  3HU2 A;  1G8J A;  1PQH A;  1TWC A;  5FTJ A;  4AVR A;  2WAQ A;  1BW3 A;  5FTN A;  1PYQ A;  1OA9 A;  1FDO A;  2VPW A;  4RV0 A;  5H4U A;  1I3Q A;  3QWZ A;  2JIO A;  2WB1 A;  2G6G A;  3FKI A;  4QIW A;  1E60 A;  2VPZ A;  1Y5I A;  1K83 A;  4FER A;  1WCM A;  4AYB A;  3GTL A;  3CF2 A;  3X2P A;  1PT1 A;  2YUJ A;  1OGY A;  3D30 A;  1E61 A;  2JA6 A;  1EU1 A;  4KDL A;  2PIC A;  2ENG A;  1CZ4 A;  4JP7 A;  1TWG A;  2A68 D;  1VC3 B;  2DMR A;  1I50 A;  4JP6 A;  4AOK B;  2O5J D;  1E32 A;  4D7Z B;  2A69 D;  3GTO A;  2VPX A;  1N10 A;  2V3V A;  1AA6 A;  4CRY G;  4C2M A;  3GTJ A;  3IR6 A;  3X2G A;  3IR7 A;  5T5M D;  2PMZ A;  3O5A A;  1CR5 A;  3X2H A;  1YNN D;  2KI8 A;  4AON B;  1TWH A;  1YLE A;  1L8F A;  1PT0 A;  2HCZ X;  3SUK A;  2BE5 D;  1Y4Z A;  4KDI A;  5GLF A;  4JCW A;  1TWF A;  2A6E D;  2VUM A;  3ML1 A;  1G8K A;  4JS7 A;  1HD5 A;  3HKZ A;  2BH0 A;  2CW0 D;  3X2O A;  5FTM A;  4DMR A;  4KO8 A;  5EPP A;  2E2I A;  1E5V A;  2Y0S A;  1PPY A;  4AZD A;  2R92 A;  1SFO A;  5GM9 A;  3X2J A;  3QQ8 A;  3SUJ A;  3OUG A;  1DMR A;  3QC8 A;  3GTG A;  1S3S A;  4KLN A;  4FG4 A;  3H0G A;  5GLY A;  2E7Z A;  1Q16 A;  2EEO B;  4KOD A;  5DYI A;  2NVX A;  1YNJ D;  5C18 A;  3QQ7 A;  3IR5 A;  2G5D A;  1TMO A;  2PJJ A;  1R27 A;  2PNW A;  1Y1V A;  1PQF A;  1QCS A;  1ZYR D;  4ZM7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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