2G6GA

Crystal structure of mlta from neisseria gonorrhoeae
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
410
structure length
405
Chain Sequence
PDTSVINGPDRPAGIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCAQAFQTPIHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDGRRTERARFPIYGIPDDFISVPLPAGLRGGKNLVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIKGRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIRIGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFFRELDGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQDTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of the Lytic Transglycosylase MltA from N.gonorrhoeae and E.coli: Insights into Interdomain Movements and Substrate Binding.
pubmed doi rcsb
molecule tags Hydrolase
source organism Neisseria gonorrhoeae fa 1090
molecule keywords GNA33
total genus 95
structure length 405
sequence length 410
ec nomenclature ec 3.2.1.-:
pdb deposition date 2006-02-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 2g6gA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 2g6gA02
3X2OA 4L48A 4FFTA 2PICA 2G5DA 4JS7A 2HCZX 2PI8A 4JP7A 1L8FA 1OA9A 3X2PA 4JP6A 4JJOA 3SUKA 3X2KA 1OA7A 4ZM7A 1BW4A 1HD5A 1BW3A 2PNWA 2BH0A 3X2HA 3X2NA 2KQAA 3ENGA 3X2IA 4JCWA 3CZBA 3X2LA 5GLYA 2ENGA 1WC2A 5GM9A 3SUJA 2AE0X 5GLXA 3X2MA 4AVRA 5H4UA 3X2JA 4FERA 4FG2A 3SUMA 2GAEA 3X2GA 1N10A 4FG4A 4ENGA 3M3GA 3SULA 2G6GA 2PJJA 3D30A
chains in the Genus database with same CATH superfamily
2NAPA 2WB1A 1SIWA 1ZJWA 1QDNA 5GAEW 2Y0SA 4UY88 1FDIA 1VC3B 2C45A 2A6HD 2DMRA 3X1LB 1R7RA 2JIMA 3DMRA 3QQ7A 2HCZX 3DLLS 4JP6A 1E18A 2CW0D 4RV0A 1OA7A 1QCSA 3SUKA 3X2KA 4ZM7A 1NXZA 2VPXA 2A68D 3PIPS 2KQAA 3ENGA 4JXXA 2KI8A 2Z0YA 1G8JA 4U67S 4V194 3QC8A 5FTJA 5GLYA 3X2LA 1H0HA 2JA5A 2ENGA 1WC2A 4GA6A 2V3VA 3SUJA 3HU3A 1AW8B 3ML1A 3TIWA 1UHEA 4AVRA 1Q16A 3GTLA 3QWZA 2CX8A 3TM7B 5FTLA 2BE5D 4QIWA 4CS0A 2NVXA 4P2BA 3SUMA 4E8BA 4GA5A 2GAEA 3CF5S 3X2GA 3PLXB 2A6ED 4FG4A 1VHYA 2G6GA 2PJJA 2YU9A 3GTJA 4WFAS 1Y1VA 2ZJQS 4KDIA 2RD2A 1E32A 5C18A 4FFTA 4KLNA 1TMOA 2PICA 1PQEA 3GTPA 1EUQA 1ZYRD 1PQHA 3IR5A 2IV2X 4JS7A 3GTKA 5C1BA 3HU1A 1OA9A 5GLFA 1OGYA 1YLEA 4JJOA 4L69A 3CQZA 1BW3A 5JVGS 4KO8A 1K83A 4AOKB 2VPZA 1R27A 5HL7S 2BH0A 3W2WB 1S3SA 4WFBS 1CR5A 2VPYA 2PJHB 1Y1WA 1PQFA 1Z85A 5IZNA 3SULA 4AZDA 3HKZA 4D7ZB 1YNJD 4DMRA 2R92A 1EUYA 1I3QA 1E61A 2E2IA 4JXZA 1QTQA 5H4UA 4JYZA 3H0GA 2VPWA 4IOCS 2JIQA 2JA6A 1SFOA 2EGWA 1IW7D 1KQFA 1D6KA 4CRYG 4AYBA 2EGVA 4H4KA 1N10A 1TWAA 4ENGA 1VHKA 4FERA 3AIIA 3D30A 1O0CA 1QRUA 3X2OA 4L48A 1I50A 1PT0A 4KODA 2NWAA 1ZC1A 5B6CA 2NVYA 3IR6A 1SMYD 4NOHA 2HZ7A 4AONB 2YUJA 2G5DA 1PYUB 1FDOA 1TWGA 2R7ZA 1L8FA 1Y5IA 2PMZA 3X2PA 1CZ5A 4C2MA 5GAHW 2V45A 3HU2A 1AA6A 3GTGA 3GTQA 4KDLA 2JIRA 5DYIA 3X2NA 2RE8A 5FTNA 4JCWA 3CZBA 3CF2A 4AAYA 4WFNS 5T5ID 4WCES 1QRSA 3QQ8A 3X2MA 2AE0X 2JA7A 1GTSA 1TWCA 5T5MD 3OUGA 3O5AA 5GADW 1TWHA 5FTKA 1G8KA 2R93A 1E5VA 2EEOB 2ZJRS 2A69D 5FTMA 1B75A 3M3GA 1HD5A 3KW2A 2ZJPS 1E60A 1UHDA 1TWFA 1PPYA 1PT1A 1WCMA 1Y4ZA 1UDXA 1WLFA 2JIPA 2PI8A 2B63A 1NYLA 4JP7A 2NYAA 4IOAS 3FKIA 3GTMA 1BW4A 4CRZA 3GTOA 3IR7A 1R9TA 5BNZA 1O0BA 2PNWA 5JVHS 1YNND 3X2HA 1GTRA 1FEUA 4WF9S 3X2IA 1QRTA 4IO9S 2VUMA 2JIOA 2O5JD 4H3SA 5DM6S 1EU1A 5EPPA 5DM7S 1EXDA 5GM9A 5GLXA 3W2VB 2WAQA 1DFUP 1V6ZA 1H5NA 3X2JA 5GAGW 1CZ4A 1KQGA 4FG2A 1DMRA 4J3CA 1DMSA 1PYQA 2E7ZA 2E2HA 3J7ZV 3PIOS 5DYGA
chains in the Genus database with same CATH topology
2NAPA 2WB1A 1SIWA 1QDNA 2Y0SA 1FDIA 1VC3B 2C45A 2A6HD 2DMRA 1R7RA 2JIMA 3DMRA 3QQ7A 2HCZX 4JP6A 1E18A 3SUKA 3X2KA 1OA7A 4ZM7A 1QCSA 2CW0D 4RV0A 2VPXA 2A68D 2KQAA 3ENGA 2KI8A 1G8JA 3X2LA 3QC8A 5GLYA 5FTJA 1H0HA 2JA5A 2ENGA 1WC2A 3SUJA 2V3VA 4GA6A 4AVRA 1AW8B 3HU3A 3ML1A 1UHEA 3TIWA 1Q16A 3GTLA 3QWZA 3TM7B 5FTLA 2BE5D 4QIWA 4CS0A 2NVXA 3SUMA 4GA5A 2GAEA 3X2GA 3PLXB 2A6ED 4FG4A 2G6GA 2PJJA 2YU9A 3GTJA 1Y1VA 4KDIA 1E32A 5C18A 4FFTA 4KLNA 1TMOA 2PICA 1PQEA 3GTPA 1ZYRD 1PQHA 3IR5A 2IV2X 4JS7A 3GTKA 5C1BA 3HU1A 1OA9A 5GLFA 1OGYA 1YLEA 4JJOA 3CQZA 1BW3A 4KO8A 1K83A 4AOKB 2VPZA 1R27A 2BH0A 1S3SA 1CR5A 2VPYA 2PJHB 1Y1WA 1PQFA 4AZDA 3HKZA 4D7ZB 1YNJD 4DMRA 2R92A 1I3QA 1E61A 2E2IA 5H4UA 3H0GA 2VPWA 2JIQA 2JA6A 1SFOA 1IW7D 1KQFA 4CRYG 4AYBA 1N10A 4ENGA 1TWAA 4FERA 3D30A 3X2OA 4L48A 1I50A 1PT0A 4KODA 1ZC1A 2E7ZA 5B6CA 2NVYA 3IR6A 1SMYD 4NOHA 4AONB 2YUJA 2G5DA 1PYUB 1FDOA 1TWGA 2R7ZA 1L8FA 1Y5IA 2PMZA 3X2PA 1CZ5A 4C2MA 2V45A 3HU2A 1AA6A 3GTGA 3GTQA 4KDLA 2JIRA 5DYIA 3X2NA 5FTNA 4JCWA 3CZBA 3CF2A 4AAYA 5T5ID 3X2MA 3QQ8A 2AE0X 2JA7A 1TWCA 5T5MD 3OUGA 3O5AA 1TWHA 5FTKA 1G8KA 2R93A 1E5VA 2EEOB 2A69D 5FTMA 3M3GA 1HD5A 1E60A 1UHDA 1TWFA 1PPYA 1PT1A 1WCMA 1Y4ZA 1WLFA 2JIPA 2PI8A 2B63A 4JP7A 2NYAA 3FKIA 1BW4A 3GTMA 4CRZA 3GTOA 3IR7A 1R9TA 2PNWA 3X2HA 1YNND 3X2IA 2VUMA 2JIOA 2O5JD 1EU1A 5EPPA 5GM9A 5GLXA 2WAQA 1H5NA 3X2JA 1CZ4A 1KQGA 4FG2A 1DMRA 1DMSA 1PYQA 3SULA 2E2HA 5DYGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3X2O A;  4L48 A;  4FFT A;  2PIC A;  2G5D A;  4JS7 A;  2HCZ X;  2PI8 A;  4JP7 A;  1L8F A;  1OA9 A;  3X2P A;  4JP6 A;  4JJO A;  3SUK A;  3X2K A;  1OA7 A;  4ZM7 A;  1BW4 A;  1HD5 A;  1BW3 A;  2PNW A;  2BH0 A;  3X2H A;  3X2N A;  2KQA A;  3ENG A;  3X2I A;  4JCW A;  3CZB A;  3X2L A;  5GLY A;  2ENG A;  1WC2 A;  5GM9 A;  3SUJ A;  2AE0 X;  5GLX A;  3X2M A;  4AVR A;  5H4U A;  3X2J A;  4FER A;  4FG2 A;  3SUM A;  2GAE A;  3X2G A;  1N10 A;  4FG4 A;  4ENG A;  3M3G A;  3SUL A;  2G6G A;  2PJJ A;  3D30 A; 
#chains in the Genus database with same CATH topology
 2NAP A;  2WB1 A;  1SIW A;  1ZJW A;  1QDN A;  5GAE W;  2Y0S A;  4UY8 8;  1FDI A;  1VC3 B;  2C45 A;  2A6H D;  2DMR A;  3X1L B;  1R7R A;  2JIM A;  3DMR A;  3QQ7 A;  2HCZ X;  3DLL S;  4JP6 A;  1E18 A;  2CW0 D;  4RV0 A;  1OA7 A;  1QCS A;  3SUK A;  3X2K A;  4ZM7 A;  1NXZ A;  2VPX A;  2A68 D;  3PIP S;  2KQA A;  3ENG A;  4JXX A;  2KI8 A;  2Z0Y A;  1G8J A;  4U67 S;  4V19 4;  3QC8 A;  5FTJ A;  5GLY A;  3X2L A;  1H0H A;  2JA5 A;  2ENG A;  1WC2 A;  4GA6 A;  2V3V A;  3SUJ A;  3HU3 A;  1AW8 B;  3ML1 A;  3TIW A;  1UHE A;  4AVR A;  1Q16 A;  3GTL A;  3QWZ A;  2CX8 A;  3TM7 B;  5FTL A;  2BE5 D;  4QIW A;  4CS0 A;  2NVX A;  4P2B A;  3SUM A;  4E8B A;  4GA5 A;  2GAE A;  3CF5 S;  3X2G A;  3PLX B;  2A6E D;  4FG4 A;  1VHY A;  2G6G A;  2PJJ A;  2YU9 A;  3GTJ A;  4WFA S;  1Y1V A;  2ZJQ S;  4KDI A;  2RD2 A;  1E32 A;  5C18 A;  4FFT A;  4KLN A;  1TMO A;  2PIC A;  1PQE A;  3GTP A;  1EUQ A;  1ZYR D;  1PQH A;  3IR5 A;  2IV2 X;  4JS7 A;  3GTK A;  5C1B A;  3HU1 A;  1OA9 A;  5GLF A;  1OGY A;  1YLE A;  4JJO A;  4L69 A;  3CQZ A;  1BW3 A;  5JVG S;  4KO8 A;  1K83 A;  4AOK B;  2VPZ A;  1R27 A;  5HL7 S;  2BH0 A;  3W2W B;  1S3S A;  4WFB S;  1CR5 A;  2VPY A;  2PJH B;  1Y1W A;  1PQF A;  1Z85 A;  5IZN A;  3SUL A;  4AZD A;  3HKZ A;  4D7Z B;  1YNJ D;  4DMR A;  2R92 A;  1EUY A;  1I3Q A;  1E61 A;  2E2I A;  4JXZ A;  1QTQ A;  5H4U A;  4JYZ A;  3H0G A;  2VPW A;  4IOC S;  2JIQ A;  2JA6 A;  1SFO A;  2EGW A;  1IW7 D;  1KQF A;  1D6K A;  4CRY G;  4AYB A;  2EGV A;  4H4K A;  1N10 A;  1TWA A;  4ENG A;  1VHK A;  4FER A;  3AII A;  3D30 A;  1O0C A;  1QRU A;  3X2O A;  4L48 A;  1I50 A;  1PT0 A;  4KOD A;  2NWA A;  1ZC1 A;  5B6C A;  2NVY A;  3IR6 A;  1SMY D;  4NOH A;  2HZ7 A;  4AON B;  2YUJ A;  2G5D A;  1PYU B;  1FDO A;  1TWG A;  2R7Z A;  1L8F A;  1Y5I A;  2PMZ A;  3X2P A;  1CZ5 A;  4C2M A;  5GAH W;  2V45 A;  3HU2 A;  1AA6 A;  3GTG A;  3GTQ A;  4KDL A;  2JIR A;  5DYI A;  3X2N A;  2RE8 A;  5FTN A;  4JCW A;  3CZB A;  3CF2 A;  4AAY A;  4WFN S;  5T5I D;  4WCE S;  1QRS A;  3QQ8 A;  3X2M A;  2AE0 X;  2JA7 A;  1GTS A;  1TWC A;  5T5M D;  3OUG A;  3O5A A;  5GAD W;  1TWH A;  5FTK A;  1G8K A;  2R93 A;  1E5V A;  2EEO B;  2ZJR S;  2A69 D;  5FTM A;  1B75 A;  3M3G A;  1HD5 A;  3KW2 A;  2ZJP S;  1E60 A;  1UHD A;  1TWF A;  1PPY A;  1PT1 A;  1WCM A;  1Y4Z A;  1UDX A;  1WLF A;  2JIP A;  2PI8 A;  2B63 A;  1NYL A;  4JP7 A;  2NYA A;  4IOA S;  3FKI A;  3GTM A;  1BW4 A;  4CRZ A;  3GTO A;  3IR7 A;  1R9T A;  5BNZ A;  1O0B A;  2PNW A;  5JVH S;  1YNN D;  3X2H A;  1GTR A;  1FEU A;  4WF9 S;  3X2I A;  1QRT A;  4IO9 S;  2VUM A;  2JIO A;  2O5J D;  4H3S A;  5DM6 S;  1EU1 A;  5EPP A;  5DM7 S;  1EXD A;  5GM9 A;  5GLX A;  3W2V B;  2WAQ A;  1DFU P;  1V6Z A;  1H5N A;  3X2J A;  5GAG W;  1CZ4 A;  1KQG A;  4FG2 A;  1DMR A;  4J3C A;  1DMS A;  1PYQ A;  2E7Z A;  2E2H A;  3J7Z V;  3PIO S;  5DYG A; 
#chains in the Genus database with same CATH homology
 2NAP A;  2WB1 A;  1SIW A;  1QDN A;  2Y0S A;  1FDI A;  1VC3 B;  2C45 A;  2A6H D;  2DMR A;  1R7R A;  2JIM A;  3DMR A;  3QQ7 A;  2HCZ X;  4JP6 A;  1E18 A;  3SUK A;  3X2K A;  1OA7 A;  4ZM7 A;  1QCS A;  2CW0 D;  4RV0 A;  2VPX A;  2A68 D;  2KQA A;  3ENG A;  2KI8 A;  1G8J A;  3X2L A;  3QC8 A;  5GLY A;  5FTJ A;  1H0H A;  2JA5 A;  2ENG A;  1WC2 A;  3SUJ A;  2V3V A;  4GA6 A;  4AVR A;  1AW8 B;  3HU3 A;  3ML1 A;  1UHE A;  3TIW A;  1Q16 A;  3GTL A;  3QWZ A;  3TM7 B;  5FTL A;  2BE5 D;  4QIW A;  4CS0 A;  2NVX A;  3SUM A;  4GA5 A;  2GAE A;  3X2G A;  3PLX B;  2A6E D;  4FG4 A;  2G6G A;  2PJJ A;  2YU9 A;  3GTJ A;  1Y1V A;  4KDI A;  1E32 A;  5C18 A;  4FFT A;  4KLN A;  1TMO A;  2PIC A;  1PQE A;  3GTP A;  1ZYR D;  1PQH A;  3IR5 A;  2IV2 X;  4JS7 A;  3GTK A;  5C1B A;  3HU1 A;  1OA9 A;  5GLF A;  1OGY A;  1YLE A;  4JJO A;  3CQZ A;  1BW3 A;  4KO8 A;  1K83 A;  4AOK B;  2VPZ A;  1R27 A;  2BH0 A;  1S3S A;  1CR5 A;  2VPY A;  2PJH B;  1Y1W A;  1PQF A;  4AZD A;  3HKZ A;  4D7Z B;  1YNJ D;  4DMR A;  2R92 A;  1I3Q A;  1E61 A;  2E2I A;  5H4U A;  3H0G A;  2VPW A;  2JIQ A;  2JA6 A;  1SFO A;  1IW7 D;  1KQF A;  4CRY G;  4AYB A;  1N10 A;  4ENG A;  1TWA A;  4FER A;  3D30 A;  3X2O A;  4L48 A;  1I50 A;  1PT0 A;  4KOD A;  1ZC1 A;  2E7Z A;  5B6C A;  2NVY A;  3IR6 A;  1SMY D;  4NOH A;  4AON B;  2YUJ A;  2G5D A;  1PYU B;  1FDO A;  1TWG A;  2R7Z A;  1L8F A;  1Y5I A;  2PMZ A;  3X2P A;  1CZ5 A;  4C2M A;  2V45 A;  3HU2 A;  1AA6 A;  3GTG A;  3GTQ A;  4KDL A;  2JIR A;  5DYI A;  3X2N A;  5FTN A;  4JCW A;  3CZB A;  3CF2 A;  4AAY A;  5T5I D;  3X2M A;  3QQ8 A;  2AE0 X;  2JA7 A;  1TWC A;  5T5M D;  3OUG A;  3O5A A;  1TWH A;  5FTK A;  1G8K A;  2R93 A;  1E5V A;  2EEO B;  2A69 D;  5FTM A;  3M3G A;  1HD5 A;  1E60 A;  1UHD A;  1TWF A;  1PPY A;  1PT1 A;  1WCM A;  1Y4Z A;  1WLF A;  2JIP A;  2PI8 A;  2B63 A;  4JP7 A;  2NYA A;  3FKI A;  1BW4 A;  3GTM A;  4CRZ A;  3GTO A;  3IR7 A;  1R9T A;  2PNW A;  3X2H A;  1YNN D;  3X2I A;  2VUM A;  2JIO A;  2O5J D;  1EU1 A;  5EPP A;  5GM9 A;  5GLX A;  2WAQ A;  1H5N A;  3X2J A;  1CZ4 A;  1KQG A;  4FG2 A;  1DMR A;  1DMS A;  1PYQ A;  3SUL A;  2E2H A;  5DYG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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