3CZBA

Crystal structure of putative transglycosylase from caulobacter crescentus
Total Genus 85
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
85
sequence length
338
structure length
325
Chain Sequence
MPAALSFAGLAGWAEEDHLAALNAFRAGCGVSKDPAAARVCGLAKATKDLDVSGAKAFIEANFRVEAVDGGGDGLLTAYFAPQYEARMSRNAEFSAPLRGLPADLVVLDLGPFEPALVGKKITGHVEGSTFVPYPDRAEIEATPSDKPLAWMRPEELFFLQIQGSGVLVLPDGRRVRAVFAGTNGKPFVGIAIAMRDKGLLADAIRTWLAEHRGPEADAIMRLNPRYVFFRTVPDDGKEPAGAAGVALPPGRAIAVDPGYHAYGGFYWLDAAFPVYRRAVTALDTGGAIKGEVRADLYMGSGAVAGVEAGRVRHTLRLYRLTPNP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of putative transglycosylase from Caulobacter crescentus.
rcsb
molecule tags Structural genomics, unknown function
source organism Caulobacter crescentus
molecule keywords Putative transglycosylase
total genus 85
structure length 325
sequence length 338
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3czbA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 3czbA02
3SUKA 1L8FA 2KQAA 4JS7A 2PNWA 1HD5A 4JCWA 5GM9A 2PI8A 4L48A 2GAEA 3X2OA 3CZBA 3X2PA 4JJOA 4JP6A 3X2MA 4ENGA 1N10A 3ENGA 4FERA 3SULA 5GLXA 1OA9A 1OA7A 2BH0A 4ZM7A 2AE0X 3X2GA 1BW3A 2G5DA 5H4UA 1BW4A 4FG2A 3SUMA 3D30A 3X2HA 5GLYA 2PICA 2PJJA 3X2NA 4FG4A 3X2JA 3SUJA 4AVRA 2ENGA 3M3GA 3X2LA 3X2KA 4FFTA 2HCZX 3X2IA 1WC2A 2G6GA 4JP7A
chains in the Genus database with same CATH superfamily
1Q16A 1R7RA 5DYIA 5FTNA 1S3SA 4DMRA 1I50A 1EXDA 1ZYRD 4AZDA 1QCSA 1WCMA 2A68D 2NAPA 1Y5IA 2VPYA 5GM9A 3HKZA 1SFOA 2NVXA 3OUGA 3CF2A 4KLNA 1FDIA 2V3VA 2NWAA 4AYBA 2Y0SA 4ENGA 1N10A 1D6KA 4V194 3SULA 2HZ7A 1SIWA 1E18A 3PLXB 2IV2X 4L69A 2AE0X 4AAYA 5T5ID 1NYLA 1BW3A 3W2WB 4WFBS 4JXZA 4J3CA 5FTLA 3GTMA 3SUMA 1TWHA 5FTJA 2R7ZA 5GAGW 2JA7A 2CW0D 5GLYA 1CZ5A 1QRUA 2BE5D 4AVRA 3QC8A 3HU3A 3X2LA 5JVHS 2VPXA 1R9TA 5DM6S 2R92A 2WB1A 2G6GA 1FDOA 2YUJA 4AOKB 4IOCS 4JS7A 1O0BA 4NOHA 1G8KA 4H3SA 1V6ZA 2JIRA 3GTKA 2E7ZA 3ML1A 4JCWA 4D7ZB 1AA6A 2EGVA 4GA6A 4CRYG 1ZC1A 3PIPS 1E32A 2A6ED 3IR5A 3QQ7A 1G8JA 2C45A 4QIWA 3CQZA 3HU1A 5B6CA 3AIIA 1QRSA 2NVYA 1FEUA 3ENGA 4FERA 1AW8B 5GLXA 5GAEW 3DLLS 5FTMA 2A6HD 3CF5S 5IZNA 3X1LB 2RD2A 5FTKA 1YNJD 1PQHA 1PQEA 1BW4A 2EEOB 1K83A 1E61A 1VC3B 3X2HA 2PJJA 3X2NA 2EGWA 4IOAS 1E60A 2ENGA 2WAQA 2HCZX 3QWZA 5GLFA 2VUMA 4JP7A 3H0GA 3SUKA 1L8FA 1PPYA 4KDLA 1PYUB 2JIPA 2PNWA 1QRTA 3O5AA 3GTLA 1CZ4A 1PT0A 1KQFA 1TMOA 2Z0YA 2PI8A 2JA5A 4JYZA 2VPWA 4L48A 4RV0A 3X2OA 3GTGA 2E2HA 4WFAS 4KODA 2E2IA 3GTPA 1DFUP 1TWCA 1DMRA 1TWFA 3CZBA 2V45A 4JP6A 2R93A 2CX8A 1GTSA 1VHYA 1OA9A 1OA7A 2DMRA 3FKIA 1UHEA 2BH0A 3QQ8A 1PYQA 2ZJQS 4ZM7A 1SMYD 2JIOA 1O0CA 1B75A 5DYGA 1PQFA 1OGYA 4WCES 1QTQA 2VPZA 4FG2A 5C18A 3D30A 1UDXA 4WF9S 2KI8A 3GTOA 2JA6A 1CR5A 3M3GA 3KW2A 4JXXA 4UY88 4WFNS 3X2KA 4FFTA 3X2IA 3IR7A 3TIWA 1YLEA 2RE8A 1WC2A 3X2JA 2KQAA 1TWGA 4CRZA 2PJHB 1I3QA 4H4KA 1UHDA 1HD5A 3HU2A 3IR6A 1H5NA 1E5VA 2GAEA 5JVGS 4KO8A 4CS0A 3PIOS 2ZJPS 2PMZA 5GAHW 3X2PA 1EU1A 4GA5A 4JJOA 3X2MA 2JIMA 4E8BA 2B63A 5GADW 2NYAA 5C1BA 3GTJA 3J7ZV 5DM7S 3GTQA 1Z85A 1Y4ZA 2JIQA 2ZJRS 1DMSA 1Y1VA 1TWAA 5EPPA 5T5MD 3TM7B 1R27A 4AONB 1KQGA 4KDIA 3X2GA 4IO9S 2G5DA 5H4UA 1EUQA 1PT1A 1QDNA 2O5JD 1VHKA 1EUYA 3W2VB 1Y1WA 2PICA 1YNND 1IW7D 4FG4A 4U67S 3SUJA 1WLFA 5BNZA 1NXZA 3DMRA 1GTRA 1H0HA 2YU9A 2A69D 4P2BA 4C2MA 5HL7S 1ZJWA
chains in the Genus database with same CATH topology
1Q16A 1R7RA 5DYIA 5FTNA 1S3SA 4DMRA 1I50A 1ZYRD 4AZDA 1QCSA 1WCMA 5GM9A 2A68D 1Y5IA 2NAPA 2VPYA 3HKZA 1SFOA 2NVXA 3OUGA 3CF2A 4KLNA 1FDIA 2V3VA 4AYBA 2Y0SA 4ENGA 1N10A 3SULA 1SIWA 1E18A 3PLXB 2IV2X 2AE0X 4AAYA 5T5ID 1BW3A 5FTLA 3GTMA 3SUMA 1TWHA 5FTJA 2R7ZA 2JA7A 5GLYA 2CW0D 1CZ5A 2BE5D 4AVRA 3QC8A 3X2LA 3HU3A 2VPXA 1R9TA 2R92A 2WB1A 2G6GA 1FDOA 2YUJA 4AOKB 4JS7A 4NOHA 1G8KA 2JIRA 3GTKA 2E7ZA 4JCWA 3ML1A 4D7ZB 1AA6A 4GA6A 4CRYG 1ZC1A 1E32A 2A6ED 3IR5A 3QQ7A 1G8JA 2C45A 4QIWA 3CQZA 3HU1A 5B6CA 2NVYA 3ENGA 4FERA 1AW8B 5GLXA 5FTMA 2A6HD 5FTKA 1YNJD 1PQHA 1PQEA 1BW4A 2EEOB 1K83A 1E61A 3X2HA 1VC3B 2PJJA 3X2NA 2ENGA 1E60A 2WAQA 2HCZX 3QWZA 5GLFA 2VUMA 4JP7A 3SUKA 3H0GA 1L8FA 1PPYA 4KDLA 1PYUB 2PNWA 2JIPA 3O5AA 3GTLA 1CZ4A 1PT0A 1KQFA 1TMOA 2PI8A 2JA5A 2VPWA 4L48A 4RV0A 3X2OA 3GTGA 2E2HA 4KODA 2E2IA 3GTPA 1TWCA 3CZBA 1DMRA 1TWFA 2V45A 4JP6A 2R93A 1OA9A 1OA7A 2DMRA 3FKIA 1UHEA 2BH0A 3QQ8A 1PYQA 4ZM7A 1SMYD 2JIOA 5DYGA 1PQFA 1OGYA 4FG2A 2VPZA 5C18A 3D30A 2KI8A 3GTOA 2JA6A 1CR5A 3M3GA 3X2KA 4FFTA 3X2IA 3IR7A 3TIWA 1YLEA 1WC2A 3X2JA 2KQAA 1TWGA 4CRZA 2PJHB 1I3QA 1UHDA 1HD5A 3HU2A 3IR6A 1H5NA 1E5VA 2GAEA 4KO8A 4CS0A 2PMZA 3X2PA 1EU1A 4JJOA 3X2MA 4GA5A 2JIMA 2B63A 2NYAA 5C1BA 3GTJA 3GTQA 1Y4ZA 2JIQA 1DMSA 1Y1VA 1TWAA 5EPPA 5T5MD 3TM7B 1R27A 4AONB 1KQGA 3X2GA 4KDIA 2G5DA 5H4UA 1PT1A 1QDNA 2O5JD 1Y1WA 2PICA 1YNND 1IW7D 4FG4A 3SUJA 1WLFA 3DMRA 1H0HA 2YU9A 2A69D 4C2MA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SUK A;  1L8F A;  2KQA A;  4JS7 A;  2PNW A;  1HD5 A;  4JCW A;  5GM9 A;  2PI8 A;  4L48 A;  2GAE A;  3X2O A;  3CZB A;  3X2P A;  4JJO A;  4JP6 A;  3X2M A;  4ENG A;  1N10 A;  3ENG A;  4FER A;  3SUL A;  5GLX A;  1OA9 A;  1OA7 A;  2BH0 A;  4ZM7 A;  2AE0 X;  3X2G A;  1BW3 A;  2G5D A;  5H4U A;  1BW4 A;  4FG2 A;  3SUM A;  3D30 A;  3X2H A;  5GLY A;  2PIC A;  2PJJ A;  3X2N A;  4FG4 A;  3X2J A;  3SUJ A;  4AVR A;  2ENG A;  3M3G A;  3X2L A;  3X2K A;  4FFT A;  2HCZ X;  3X2I A;  1WC2 A;  2G6G A;  4JP7 A; 
#chains in the Genus database with same CATH topology
 1Q16 A;  1R7R A;  5DYI A;  5FTN A;  1S3S A;  4DMR A;  1I50 A;  1EXD A;  1ZYR D;  4AZD A;  1QCS A;  1WCM A;  2A68 D;  2NAP A;  1Y5I A;  2VPY A;  5GM9 A;  3HKZ A;  1SFO A;  2NVX A;  3OUG A;  3CF2 A;  4KLN A;  1FDI A;  2V3V A;  2NWA A;  4AYB A;  2Y0S A;  4ENG A;  1N10 A;  1D6K A;  4V19 4;  3SUL A;  2HZ7 A;  1SIW A;  1E18 A;  3PLX B;  2IV2 X;  4L69 A;  2AE0 X;  4AAY A;  5T5I D;  1NYL A;  1BW3 A;  3W2W B;  4WFB S;  4JXZ A;  4J3C A;  5FTL A;  3GTM A;  3SUM A;  1TWH A;  5FTJ A;  2R7Z A;  5GAG W;  2JA7 A;  2CW0 D;  5GLY A;  1CZ5 A;  1QRU A;  2BE5 D;  4AVR A;  3QC8 A;  3HU3 A;  3X2L A;  5JVH S;  2VPX A;  1R9T A;  5DM6 S;  2R92 A;  2WB1 A;  2G6G A;  1FDO A;  2YUJ A;  4AOK B;  4IOC S;  4JS7 A;  1O0B A;  4NOH A;  1G8K A;  4H3S A;  1V6Z A;  2JIR A;  3GTK A;  2E7Z A;  3ML1 A;  4JCW A;  4D7Z B;  1AA6 A;  2EGV A;  4GA6 A;  4CRY G;  1ZC1 A;  3PIP S;  1E32 A;  2A6E D;  3IR5 A;  3QQ7 A;  1G8J A;  2C45 A;  4QIW A;  3CQZ A;  3HU1 A;  5B6C A;  3AII A;  1QRS A;  2NVY A;  1FEU A;  3ENG A;  4FER A;  1AW8 B;  5GLX A;  5GAE W;  3DLL S;  5FTM A;  2A6H D;  3CF5 S;  5IZN A;  3X1L B;  2RD2 A;  5FTK A;  1YNJ D;  1PQH A;  1PQE A;  1BW4 A;  2EEO B;  1K83 A;  1E61 A;  1VC3 B;  3X2H A;  2PJJ A;  3X2N A;  2EGW A;  4IOA S;  1E60 A;  2ENG A;  2WAQ A;  2HCZ X;  3QWZ A;  5GLF A;  2VUM A;  4JP7 A;  3H0G A;  3SUK A;  1L8F A;  1PPY A;  4KDL A;  1PYU B;  2JIP A;  2PNW A;  1QRT A;  3O5A A;  3GTL A;  1CZ4 A;  1PT0 A;  1KQF A;  1TMO A;  2Z0Y A;  2PI8 A;  2JA5 A;  4JYZ A;  2VPW A;  4L48 A;  4RV0 A;  3X2O A;  3GTG A;  2E2H A;  4WFA S;  4KOD A;  2E2I A;  3GTP A;  1DFU P;  1TWC A;  1DMR A;  1TWF A;  3CZB A;  2V45 A;  4JP6 A;  2R93 A;  2CX8 A;  1GTS A;  1VHY A;  1OA9 A;  1OA7 A;  2DMR A;  3FKI A;  1UHE A;  2BH0 A;  3QQ8 A;  1PYQ A;  2ZJQ S;  4ZM7 A;  1SMY D;  2JIO A;  1O0C A;  1B75 A;  5DYG A;  1PQF A;  1OGY A;  4WCE S;  1QTQ A;  2VPZ A;  4FG2 A;  5C18 A;  3D30 A;  1UDX A;  4WF9 S;  2KI8 A;  3GTO A;  2JA6 A;  1CR5 A;  3M3G A;  3KW2 A;  4JXX A;  4UY8 8;  4WFN S;  3X2K A;  4FFT A;  3X2I A;  3IR7 A;  3TIW A;  1YLE A;  2RE8 A;  1WC2 A;  3X2J A;  2KQA A;  1TWG A;  4CRZ A;  2PJH B;  1I3Q A;  4H4K A;  1UHD A;  1HD5 A;  3HU2 A;  3IR6 A;  1H5N A;  1E5V A;  2GAE A;  5JVG S;  4KO8 A;  4CS0 A;  3PIO S;  2ZJP S;  2PMZ A;  5GAH W;  3X2P A;  1EU1 A;  4GA5 A;  4JJO A;  3X2M A;  2JIM A;  4E8B A;  2B63 A;  5GAD W;  2NYA A;  5C1B A;  3GTJ A;  3J7Z V;  5DM7 S;  3GTQ A;  1Z85 A;  1Y4Z A;  2JIQ A;  2ZJR S;  1DMS A;  1Y1V A;  1TWA A;  5EPP A;  5T5M D;  3TM7 B;  1R27 A;  4AON B;  1KQG A;  4KDI A;  3X2G A;  4IO9 S;  2G5D A;  5H4U A;  1EUQ A;  1PT1 A;  1QDN A;  2O5J D;  1VHK A;  1EUY A;  3W2V B;  1Y1W A;  2PIC A;  1YNN D;  1IW7 D;  4FG4 A;  4U67 S;  3SUJ A;  1WLF A;  5BNZ A;  1NXZ A;  3DMR A;  1GTR A;  1H0H A;  2YU9 A;  2A69 D;  4P2B A;  4C2M A;  5HL7 S;  1ZJW A; 
#chains in the Genus database with same CATH homology
 1Q16 A;  1R7R A;  5DYI A;  5FTN A;  1S3S A;  4DMR A;  1I50 A;  1ZYR D;  4AZD A;  1QCS A;  1WCM A;  5GM9 A;  2A68 D;  1Y5I A;  2NAP A;  2VPY A;  3HKZ A;  1SFO A;  2NVX A;  3OUG A;  3CF2 A;  4KLN A;  1FDI A;  2V3V A;  4AYB A;  2Y0S A;  4ENG A;  1N10 A;  3SUL A;  1SIW A;  1E18 A;  3PLX B;  2IV2 X;  2AE0 X;  4AAY A;  5T5I D;  1BW3 A;  5FTL A;  3GTM A;  3SUM A;  1TWH A;  5FTJ A;  2R7Z A;  2JA7 A;  5GLY A;  2CW0 D;  1CZ5 A;  2BE5 D;  4AVR A;  3QC8 A;  3X2L A;  3HU3 A;  2VPX A;  1R9T A;  2R92 A;  2WB1 A;  2G6G A;  1FDO A;  2YUJ A;  4AOK B;  4JS7 A;  4NOH A;  1G8K A;  2JIR A;  3GTK A;  2E7Z A;  4JCW A;  3ML1 A;  4D7Z B;  1AA6 A;  4GA6 A;  4CRY G;  1ZC1 A;  1E32 A;  2A6E D;  3IR5 A;  3QQ7 A;  1G8J A;  2C45 A;  4QIW A;  3CQZ A;  3HU1 A;  5B6C A;  2NVY A;  3ENG A;  4FER A;  1AW8 B;  5GLX A;  5FTM A;  2A6H D;  5FTK A;  1YNJ D;  1PQH A;  1PQE A;  1BW4 A;  2EEO B;  1K83 A;  1E61 A;  3X2H A;  1VC3 B;  2PJJ A;  3X2N A;  2ENG A;  1E60 A;  2WAQ A;  2HCZ X;  3QWZ A;  5GLF A;  2VUM A;  4JP7 A;  3SUK A;  3H0G A;  1L8F A;  1PPY A;  4KDL A;  1PYU B;  2PNW A;  2JIP A;  3O5A A;  3GTL A;  1CZ4 A;  1PT0 A;  1KQF A;  1TMO A;  2PI8 A;  2JA5 A;  2VPW A;  4L48 A;  4RV0 A;  3X2O A;  3GTG A;  2E2H A;  4KOD A;  2E2I A;  3GTP A;  1TWC A;  3CZB A;  1DMR A;  1TWF A;  2V45 A;  4JP6 A;  2R93 A;  1OA9 A;  1OA7 A;  2DMR A;  3FKI A;  1UHE A;  2BH0 A;  3QQ8 A;  1PYQ A;  4ZM7 A;  1SMY D;  2JIO A;  5DYG A;  1PQF A;  1OGY A;  4FG2 A;  2VPZ A;  5C18 A;  3D30 A;  2KI8 A;  3GTO A;  2JA6 A;  1CR5 A;  3M3G A;  3X2K A;  4FFT A;  3X2I A;  3IR7 A;  3TIW A;  1YLE A;  1WC2 A;  3X2J A;  2KQA A;  1TWG A;  4CRZ A;  2PJH B;  1I3Q A;  1UHD A;  1HD5 A;  3HU2 A;  3IR6 A;  1H5N A;  1E5V A;  2GAE A;  4KO8 A;  4CS0 A;  2PMZ A;  3X2P A;  1EU1 A;  4JJO A;  3X2M A;  4GA5 A;  2JIM A;  2B63 A;  2NYA A;  5C1B A;  3GTJ A;  3GTQ A;  1Y4Z A;  2JIQ A;  1DMS A;  1Y1V A;  1TWA A;  5EPP A;  5T5M D;  3TM7 B;  1R27 A;  4AON B;  1KQG A;  3X2G A;  4KDI A;  2G5D A;  5H4U A;  1PT1 A;  1QDN A;  2O5J D;  1Y1W A;  2PIC A;  1YNN D;  1IW7 D;  4FG4 A;  3SUJ A;  1WLF A;  3DMR A;  1H0H A;  2YU9 A;  2A69 D;  4C2M A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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