3CZBA

Crystal structure of putative transglycosylase from caulobacter crescentus
Total Genus 85
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
85
sequence length
338
structure length
325
Chain Sequence
MPAALSFAGLAGWAEEDHLAALNAFRAGCGVSKDPAAARVCGLAKATKDLDVSGAKAFIEANFRVEAVDGGGDGLLTAYFAPQYEARMSRNAEFSAPLRGLPADLVVLDLGPFEPALVGKKITGHVEGSTFVPYPDRAEIEATPSDKPLAWMRPEELFFLQIQGSGVLVLPDGRRVRAVFAGTNGKPFVGIAIAMRDKGLLADAIRTWLAEHRGPEADAIMRLNPRYVFFRTVPDDGKEPAGAAGVALPPGRAIAVDPGYHAYGGFYWLDAAFPVYRRAVTALDTGGAIKGEVRADLYMGSGAVAGVEAGRVRHTLRLYRLTPNP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
source organism Caulobacter crescentus
publication title Crystal structure of putative transglycosylase from Caulobacter crescentus.
rcsb
molecule keywords Putative transglycosylase
total genus 85
structure length 325
sequence length 338
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03562 MltA MltA specific insert domain
A PF06725 3D 3D domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3czbA01
2.40.240.50 Mainly Beta Beta Barrel Ribosomal Protein L25; Chain P Barwin-like endoglucanases 3czbA02
2AE0X 3CZBA 1OA9A 3X2MA 4AVRA 5GM9A 3SULA 2ENGA 3X2JA 5H4UA 2PNWA 4ZM7A 3X2KA 1BW4A 4ENGA 1L8FA 2GAEA 2KQAA 4JJOA 3X2IA 1HD5A 4FG2A 3D30A 3SUMA 2PI8A 2BH0A 4L48A 4JS7A 3X2OA 3X2HA 2G6GA 4FFTA 1OA7A 4FERA 3X2LA 2PJJA 4JP6A 3ENGA 1BW3A 2HCZX 4JCWA 5GLYA 4FG4A 3X2NA 3X2GA 3SUKA 4JP7A 5GLXA 1WC2A 2PICA 3M3GA 3SUJA 1N10A 3X2PA 2G5DA
chains in the Genus database with same CATH superfamily
1O0CA 1PQEA 2V45A 3IR7A 2ENGA 4C2MA 1KQGA 2E2IA 2R7ZA 1PYQA 2O5JD 1Y4ZA 3GTJA 3TIWA 1R9TA 1SMYD 2BE5D 5DM6S 3X1LB 3W2VB 2JIRA 1Y5IA 4GA5A 4AAYA 2KQAA 2CX8A 3PIOS 4JXXA 1HD5A 3HU3A 3TM7B 3D30A 1ZYRD 3GTLA 4E8BA 1D6KA 1B75A 4KLNA 4UY88 4L48A 5C1BA 4JS7A 1TWCA 2VPZA 2Y0SA 1VHYA 5T5MD 2RE8A 3HU1A 3CF2A 2G6GA 3J7ZV 1UHDA 5GLFA 1YNJD 2IV2X 1V6ZA 3H0GA 2PJJA 3ENGA 2EEOB 5JVGS 2R93A 1H0HA 5GADW 2NYAA 4FG4A 1R7RA 2VUMA 3X2GA 3SUKA 1CZ4A 2JIPA 5GLXA 3KW2A 1S3SA 5GAHW 1TWGA 4KODA 2PICA 3SUJA 2NAPA 1N10A 1Z85A 3PIPS 2KI8A 4WCES 1AW8B 4RV0A 3CZBA 1TWAA 5EPPA 3X2MA 4AVRA 1PT1A 5GM9A 2PNWA 3HKZA 1G8JA 3X2KA 4ZM7A 3O5AA 3HU2A 4ENGA 1ZC1A 4IO9S 4FG2A 1DMSA 1YLEA 2WB1A 1GTRA 1KQFA 4V194 2ZJQS 3GTOA 4AONB 1Y1VA 3X2HA 4CRYG 5DM7S 1OA7A 4FERA 3CF5S 1QRSA 1PQFA 4JP6A 5C18A 1BW3A 3GTMA 2NVXA 1PQHA 4JCWA 5GLYA 3X2NA 4P2BA 5FTKA 2ZJRS 1WC2A 3CQZA 3FKIA 4CRZA 3QQ7A 4QIWA 2JA5A 4IOCS 4L69A 2HZ7A 4IOAS 1G8KA 1E61A 1OA9A 2A6ED 5IZNA 1EUYA 3OUGA 2JA6A 5JVHS 1EXDA 5FTMA 3ML1A 3IR5A 1TWFA 2VPYA 1BW4A 4CS0A 1CZ5A 1FEUA 1L8FA 4H4KA 2A6HD 4JXZA 3GTKA 1OGYA 2NVYA 5BNZA 3DLLS 4JJOA 4WFNS 1CR5A 1EU1A 1IW7D 1TWHA 1EUQA 2JIMA 2YU9A 2B63A 1VHKA 1DMRA 1Q16A 1NYLA 3AIIA 2BH0A 2R92A 1FDIA 5GAEW 1Y1WA 2C45A 4AYBA 3IR6A 2VPWA 1PPYA 2RD2A 2JIOA 3QC8A 3QQ8A 4H3SA 2ZJPS 4WFAS 4JYZA 1E5VA 2WAQA 3X2LA 1UHEA 2A69D 1QCSA 4KO8A 2JA7A 1ZJWA 1QRUA 4AOKB 5B6CA 2HCZX 2E7ZA 1YNND 4JP7A 5DYGA 2EGVA 4NOHA 1E18A 3DMRA 2AE0X 1E32A 5FTLA 5DYIA 4WFBS 3SULA 1UDXA 3X2JA 5H4UA 1K83A 1GTSA 2EGWA 2PMZA 5HL7S 2GAEA 3GTGA 1O0BA 4KDLA 4WF9S 3X2IA 1AA6A 2CW0D 3GTPA 4J3CA 1FDOA 3SUMA 2Z0YA 2PI8A 1PT0A 2A68D 1QDNA 1PYUB 1QTQA 1R27A 2VPXA 1DFUP 1QRTA 1H5NA 1WLFA 2YUJA 3X2OA 1TMOA 3GTQA 1SIWA 1WCMA 1I3QA 4FFTA 2PJHB 5FTNA 2V3VA 5T5ID 5GAGW 4U67S 1VC3B 1SFOA 3QWZA 2E2HA 2DMRA 2NWAA 4KDIA 1E60A 3W2WB 1I50A 4DMRA 4GA6A 3PLXB 3M3GA 5FTJA 3X2PA 1NXZA 2JIQA 4D7ZB 4AZDA 2G5DA
chains in the Genus database with same CATH topology
1PQEA 2V45A 3IR7A 2ENGA 4C2MA 1KQGA 2E2IA 2R7ZA 1PYQA 2O5JD 1Y4ZA 3GTJA 3TIWA 1R9TA 1SMYD 2BE5D 2JIRA 1Y5IA 4GA5A 4AAYA 2KQAA 1HD5A 3HU3A 3TM7B 3D30A 1ZYRD 3GTLA 4KLNA 4L48A 5C1BA 4JS7A 1TWCA 2VPZA 2Y0SA 5T5MD 3HU1A 3CF2A 2G6GA 1UHDA 5GLFA 1YNJD 2IV2X 3H0GA 2PJJA 3ENGA 2EEOB 2R93A 1H0HA 2NYAA 4FG4A 1R7RA 2VUMA 3X2GA 3SUKA 1CZ4A 5GLXA 2JIPA 1S3SA 1TWGA 4KODA 2PICA 3SUJA 2NAPA 1N10A 2KI8A 1AW8B 4RV0A 3CZBA 3X2MA 1TWAA 5EPPA 4AVRA 5GM9A 1PT1A 2PNWA 4ZM7A 1G8JA 3X2KA 3HKZA 4ENGA 3HU2A 3O5AA 1ZC1A 4FG2A 1DMSA 1YLEA 2WB1A 1KQFA 3GTOA 4AONB 1Y1VA 3X2HA 4CRYG 1OA7A 4FERA 4JP6A 1PQFA 1BW3A 5C18A 3GTMA 2NVXA 1PQHA 4JCWA 5GLYA 3X2NA 5FTKA 1WC2A 3CQZA 3FKIA 4CRZA 3QQ7A 4QIWA 2JA5A 1G8KA 1E61A 1OA9A 2A6ED 3OUGA 2JA6A 5FTMA 3ML1A 3IR5A 1TWFA 2VPYA 1BW4A 4CS0A 1CZ5A 1L8FA 2A6HD 3GTKA 1OGYA 2NVYA 4JJOA 1CR5A 1EU1A 1IW7D 1TWHA 2JIMA 2YU9A 2B63A 1DMRA 1Q16A 2BH0A 2R92A 1FDIA 1Y1WA 2C45A 4AYBA 3IR6A 2VPWA 1PPYA 2JIOA 3QC8A 3QQ8A 1E5VA 3X2LA 2WAQA 1UHEA 2A69D 1QCSA 4KO8A 2JA7A 4AOKB 5B6CA 2HCZX 2E7ZA 1YNND 4JP7A 5DYGA 4NOHA 1E18A 3DMRA 2AE0X 1E32A 5FTLA 5DYIA 3SULA 3X2JA 5H4UA 1K83A 2PMZA 2GAEA 3GTGA 4KDLA 3X2IA 1AA6A 2CW0D 3GTPA 1FDOA 3SUMA 2PI8A 1PT0A 2A68D 1QDNA 1PYUB 1R27A 2VPXA 1H5NA 1WLFA 3X2OA 2YUJA 1TMOA 3GTQA 1SIWA 1WCMA 1I3QA 4FFTA 2PJHB 5FTNA 2V3VA 5T5ID 1VC3B 1SFOA 3QWZA 2E2HA 2DMRA 4KDIA 1E60A 1I50A 4DMRA 4GA6A 3PLXB 3M3GA 5FTJA 3X2PA 2JIQA 4D7ZB 4AZDA 2G5DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AE0 X;  3CZB A;  1OA9 A;  3X2M A;  4AVR A;  5GM9 A;  3SUL A;  2ENG A;  3X2J A;  5H4U A;  2PNW A;  4ZM7 A;  3X2K A;  1BW4 A;  4ENG A;  1L8F A;  2GAE A;  2KQA A;  4JJO A;  3X2I A;  1HD5 A;  4FG2 A;  3D30 A;  3SUM A;  2PI8 A;  2BH0 A;  4L48 A;  4JS7 A;  3X2O A;  3X2H A;  2G6G A;  4FFT A;  1OA7 A;  4FER A;  3X2L A;  2PJJ A;  4JP6 A;  3ENG A;  1BW3 A;  2HCZ X;  4JCW A;  5GLY A;  4FG4 A;  3X2N A;  3X2G A;  3SUK A;  4JP7 A;  5GLX A;  1WC2 A;  2PIC A;  3M3G A;  3SUJ A;  1N10 A;  3X2P A;  2G5D A; 
#chains in the Genus database with same CATH topology
 1O0C A;  1PQE A;  2V45 A;  3IR7 A;  2ENG A;  4C2M A;  1KQG A;  2E2I A;  2R7Z A;  1PYQ A;  2O5J D;  1Y4Z A;  3GTJ A;  3TIW A;  1R9T A;  1SMY D;  2BE5 D;  5DM6 S;  3X1L B;  3W2V B;  2JIR A;  1Y5I A;  4GA5 A;  4AAY A;  2KQA A;  2CX8 A;  3PIO S;  4JXX A;  1HD5 A;  3HU3 A;  3TM7 B;  3D30 A;  1ZYR D;  3GTL A;  4E8B A;  1D6K A;  1B75 A;  4KLN A;  4UY8 8;  4L48 A;  5C1B A;  4JS7 A;  1TWC A;  2VPZ A;  2Y0S A;  1VHY A;  5T5M D;  2RE8 A;  3HU1 A;  3CF2 A;  2G6G A;  3J7Z V;  1UHD A;  5GLF A;  1YNJ D;  2IV2 X;  1V6Z A;  3H0G A;  2PJJ A;  3ENG A;  2EEO B;  5JVG S;  2R93 A;  1H0H A;  5GAD W;  2NYA A;  4FG4 A;  1R7R A;  2VUM A;  3X2G A;  3SUK A;  1CZ4 A;  2JIP A;  5GLX A;  3KW2 A;  1S3S A;  5GAH W;  1TWG A;  4KOD A;  2PIC A;  3SUJ A;  2NAP A;  1N10 A;  1Z85 A;  3PIP S;  2KI8 A;  4WCE S;  1AW8 B;  4RV0 A;  3CZB A;  1TWA A;  5EPP A;  3X2M A;  4AVR A;  1PT1 A;  5GM9 A;  2PNW A;  3HKZ A;  1G8J A;  3X2K A;  4ZM7 A;  3O5A A;  3HU2 A;  4ENG A;  1ZC1 A;  4IO9 S;  4FG2 A;  1DMS A;  1YLE A;  2WB1 A;  1GTR A;  1KQF A;  4V19 4;  2ZJQ S;  3GTO A;  4AON B;  1Y1V A;  3X2H A;  4CRY G;  5DM7 S;  1OA7 A;  4FER A;  3CF5 S;  1QRS A;  1PQF A;  4JP6 A;  5C18 A;  1BW3 A;  3GTM A;  2NVX A;  1PQH A;  4JCW A;  5GLY A;  3X2N A;  4P2B A;  5FTK A;  2ZJR S;  1WC2 A;  3CQZ A;  3FKI A;  4CRZ A;  3QQ7 A;  4QIW A;  2JA5 A;  4IOC S;  4L69 A;  2HZ7 A;  4IOA S;  1G8K A;  1E61 A;  1OA9 A;  2A6E D;  5IZN A;  1EUY A;  3OUG A;  2JA6 A;  5JVH S;  1EXD A;  5FTM A;  3ML1 A;  3IR5 A;  1TWF A;  2VPY A;  1BW4 A;  4CS0 A;  1CZ5 A;  1FEU A;  1L8F A;  4H4K A;  2A6H D;  4JXZ A;  3GTK A;  1OGY A;  2NVY A;  5BNZ A;  3DLL S;  4JJO A;  4WFN S;  1CR5 A;  1EU1 A;  1IW7 D;  1TWH A;  1EUQ A;  2JIM A;  2YU9 A;  2B63 A;  1VHK A;  1DMR A;  1Q16 A;  1NYL A;  3AII A;  2BH0 A;  2R92 A;  1FDI A;  5GAE W;  1Y1W A;  2C45 A;  4AYB A;  3IR6 A;  2VPW A;  1PPY A;  2RD2 A;  2JIO A;  3QC8 A;  3QQ8 A;  4H3S A;  2ZJP S;  4WFA S;  4JYZ A;  1E5V A;  2WAQ A;  3X2L A;  1UHE A;  2A69 D;  1QCS A;  4KO8 A;  2JA7 A;  1ZJW A;  1QRU A;  4AOK B;  5B6C A;  2HCZ X;  2E7Z A;  1YNN D;  4JP7 A;  5DYG A;  2EGV A;  4NOH A;  1E18 A;  3DMR A;  2AE0 X;  1E32 A;  5FTL A;  5DYI A;  4WFB S;  3SUL A;  1UDX A;  3X2J A;  5H4U A;  1K83 A;  1GTS A;  2EGW A;  2PMZ A;  5HL7 S;  2GAE A;  3GTG A;  1O0B A;  4KDL A;  4WF9 S;  3X2I A;  1AA6 A;  2CW0 D;  3GTP A;  4J3C A;  1FDO A;  3SUM A;  2Z0Y A;  2PI8 A;  1PT0 A;  2A68 D;  1QDN A;  1PYU B;  1QTQ A;  1R27 A;  2VPX A;  1DFU P;  1QRT A;  1H5N A;  1WLF A;  2YUJ A;  3X2O A;  1TMO A;  3GTQ A;  1SIW A;  1WCM A;  1I3Q A;  4FFT A;  2PJH B;  5FTN A;  2V3V A;  5T5I D;  5GAG W;  4U67 S;  1VC3 B;  1SFO A;  3QWZ A;  2E2H A;  2DMR A;  2NWA A;  4KDI A;  1E60 A;  3W2W B;  1I50 A;  4DMR A;  4GA6 A;  3PLX B;  3M3G A;  5FTJ A;  3X2P A;  1NXZ A;  2JIQ A;  4D7Z B;  4AZD A;  2G5D A; 
#chains in the Genus database with same CATH homology
 1PQE A;  2V45 A;  3IR7 A;  2ENG A;  4C2M A;  1KQG A;  2E2I A;  2R7Z A;  1PYQ A;  2O5J D;  1Y4Z A;  3GTJ A;  3TIW A;  1R9T A;  1SMY D;  2BE5 D;  2JIR A;  1Y5I A;  4GA5 A;  4AAY A;  2KQA A;  1HD5 A;  3HU3 A;  3TM7 B;  3D30 A;  1ZYR D;  3GTL A;  4KLN A;  4L48 A;  5C1B A;  4JS7 A;  1TWC A;  2VPZ A;  2Y0S A;  5T5M D;  3HU1 A;  3CF2 A;  2G6G A;  1UHD A;  5GLF A;  1YNJ D;  2IV2 X;  3H0G A;  2PJJ A;  3ENG A;  2EEO B;  2R93 A;  1H0H A;  2NYA A;  4FG4 A;  1R7R A;  2VUM A;  3X2G A;  3SUK A;  1CZ4 A;  5GLX A;  2JIP A;  1S3S A;  1TWG A;  4KOD A;  2PIC A;  3SUJ A;  2NAP A;  1N10 A;  2KI8 A;  1AW8 B;  4RV0 A;  3CZB A;  3X2M A;  1TWA A;  5EPP A;  4AVR A;  5GM9 A;  1PT1 A;  2PNW A;  4ZM7 A;  1G8J A;  3X2K A;  3HKZ A;  4ENG A;  3HU2 A;  3O5A A;  1ZC1 A;  4FG2 A;  1DMS A;  1YLE A;  2WB1 A;  1KQF A;  3GTO A;  4AON B;  1Y1V A;  3X2H A;  4CRY G;  1OA7 A;  4FER A;  4JP6 A;  1PQF A;  1BW3 A;  5C18 A;  3GTM A;  2NVX A;  1PQH A;  4JCW A;  5GLY A;  3X2N A;  5FTK A;  1WC2 A;  3CQZ A;  3FKI A;  4CRZ A;  3QQ7 A;  4QIW A;  2JA5 A;  1G8K A;  1E61 A;  1OA9 A;  2A6E D;  3OUG A;  2JA6 A;  5FTM A;  3ML1 A;  3IR5 A;  1TWF A;  2VPY A;  1BW4 A;  4CS0 A;  1CZ5 A;  1L8F A;  2A6H D;  3GTK A;  1OGY A;  2NVY A;  4JJO A;  1CR5 A;  1EU1 A;  1IW7 D;  1TWH A;  2JIM A;  2YU9 A;  2B63 A;  1DMR A;  1Q16 A;  2BH0 A;  2R92 A;  1FDI A;  1Y1W A;  2C45 A;  4AYB A;  3IR6 A;  2VPW A;  1PPY A;  2JIO A;  3QC8 A;  3QQ8 A;  1E5V A;  3X2L A;  2WAQ A;  1UHE A;  2A69 D;  1QCS A;  4KO8 A;  2JA7 A;  4AOK B;  5B6C A;  2HCZ X;  2E7Z A;  1YNN D;  4JP7 A;  5DYG A;  4NOH A;  1E18 A;  3DMR A;  2AE0 X;  1E32 A;  5FTL A;  5DYI A;  3SUL A;  3X2J A;  5H4U A;  1K83 A;  2PMZ A;  2GAE A;  3GTG A;  4KDL A;  3X2I A;  1AA6 A;  2CW0 D;  3GTP A;  1FDO A;  3SUM A;  2PI8 A;  1PT0 A;  2A68 D;  1QDN A;  1PYU B;  1R27 A;  2VPX A;  1H5N A;  1WLF A;  3X2O A;  2YUJ A;  1TMO A;  3GTQ A;  1SIW A;  1WCM A;  1I3Q A;  4FFT A;  2PJH B;  5FTN A;  2V3V A;  5T5I D;  1VC3 B;  1SFO A;  3QWZ A;  2E2H A;  2DMR A;  4KDI A;  1E60 A;  1I50 A;  4DMR A;  4GA6 A;  3PLX B;  3M3G A;  5FTJ A;  3X2P A;  2JIQ A;  4D7Z B;  4AZD A;  2G5D A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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