1SJGA

Solution structure of t4moc, the rieske ferredoxin component of the toluene 4-monooxygenase complex
Total Genus 18
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
112
structure length
112
Chain Sequence
b'MSFEKICSLDDIWVGEMETFETSDGTEVLIVNSEEHGVKAYQAMCPHQEILLSEGSYEGGVITCRAHLWTFNDGTGHGINPDDCCLAEYPVEVKGDDIYVSTKGILPNKAHS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Toluene-4-monooxygenase system protein C
publication title Solution structure of T4moC, the Rieske ferredoxin component of the toluene 4-monooxygenase complex
pubmed doi rcsb
source organism Pseudomonas mendocina
molecule tags Electron transport
total genus 18
structure length 112
sequence length 112
ec nomenclature
pdb deposition date 2004-03-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00355 Rieske Rieske [2Fe-2S] domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domain 1sjgA00
1NTZE 3L71E 4QURA 5KLVE 1FQTA 2DE7D 2B1XA 1G8JB 4NB8D 2IBZE 2ZT9D 4NBGD 3GZYA 1KB9E 1KYOE 3L73E 4HJLA 2YFIA 2CKFA 2JO6A 3CXHE 2FYUE 2QJYC 4HM0A 2JZAA 1EG9A 4H0LD 3H1KE 3H1LE 3GL0A 2YVJB 1PP9E 3GTEA 2I7FA 1VM9A 2B24A 2E4QA 1P84E 2Q3WA 4PD4E 2NUKA 1SJGA 3D89A 3N0QA 3GKEA 2HMOA 2HMJA 4U3FE 1O7WA 1L0NE 2E4PA 2YFLA 3EN1A 1ULJA 5AEWA 2NWFA 4HM2A 5CXMA 3VMGD 1BCCE 3VMID 1UUVA 1PPJE 5BOKA 3H1HE 2BCCE 4NBDD 4NBED 1NYKA 1NTKE 2NVGA 3H1JE 4HKVA 3GZXA 1UUWA 1NDOA 1SQXE 3DQYA 1ZRTE 3GTSA 1RFSA 4HM6A 3GCEA 4NBFD 4H13D 2NVFA 1NTME 4HM4A 3CX5E 3TGUE 2YIUC 1WQLA 5KKZC 1O7PA 1G8KB 4NBCD 4QDFA 4P1BH 4QDFB 2XSHA 4NBBD 2QJKC 1EZVE 4NB9D 2XSOA 3L75E 2XRXA 2QJPC 1VCKA 2BMOA 2DE6D 3EQQA 1SQBE 4QUQA 1SQQE 3BCCE 5KLIC 4QCKA 2D2CD 3L72E 2NVEA 4QDDA 1NU1E 4EMJB 3VCAA 2QPZA 4QUPA 2HMLA 1O7GA 4NBAD 3GB4A 4P1CH 3L74E 1JM1A 2BMQA 2HMKA 4AAYB 4QDCA 2YFJA 4HM3A 2E74D 2BMRA 4HM5A 4PV1D 1Q90C 4HM7A 3VCPA 1VF5D 2E75D 3L70E 5AEUA 2E76D 4OGQD 4AIVA 2ZYLA 2DE5D 4HM8A 1O7HA 3AZCA 3C0DA 1SQPE 3H1IE 1SQVE 4HM1A 2GBWA 1BE3E 1RIEA 1O7MA 2HMMA 3FOUA 2NUMA 2XR8A 1ULIA 5HL4A 3CWBE 2GBXA 3GOBA 1O7NA 4H44D 4NBHD 2HMNA 2A06E 1L0LE 2FYNC 3GL2A 3VMHD
chains in the Genus database with same CATH superfamily
1NTZE 3L71E 4QURA 5KLVE 1FQTA 2DE7D 2B1XA 1G8JB 4NB8D 2IBZE 2ZT9D 4NBGD 3GZYA 1KB9E 1KYOE 3L73E 4HJLA 2YFIA 2CKFA 2JO6A 3CXHE 2FYUE 2QJYC 4HM0A 2JZAA 1EG9A 4H0LD 3H1KE 3H1LE 3GL0A 2YVJB 1PP9E 3GTEA 2I7FA 1VM9A 2B24A 2E4QA 1P84E 2Q3WA 4PD4E 2NUKA 1SJGA 3D89A 3N0QA 3GKEA 2HMOA 2HMJA 4U3FE 1O7WA 1L0NE 2E4PA 2YFLA 3EN1A 1ULJA 5AEWA 2NWFA 4HM2A 5CXMA 3VMGD 1BCCE 3VMID 1UUVA 1PPJE 5BOKA 3H1HE 2BCCE 4NBDD 4NBED 1NYKA 1NTKE 2NVGA 3H1JE 4HKVA 3GZXA 1UUWA 1NDOA 1SQXE 3DQYA 1ZRTE 3GTSA 1RFSA 4HM6A 3GCEA 4NBFD 4H13D 2NVFA 1NTME 4HM4A 3CX5E 3TGUE 2YIUC 1WQLA 5KKZC 1O7PA 1G8KB 4NBCD 4QDFA 4P1BH 4QDFB 2XSHA 4NBBD 2QJKC 1EZVE 4NB9D 2XSOA 3L75E 2XRXA 2QJPC 1VCKA 2BMOA 2DE6D 3EQQA 1SQBE 4QUQA 1SQQE 3BCCE 5KLIC 4QCKA 2D2CD 3L72E 2NVEA 4QDDA 1NU1E 4EMJB 3VCAA 2QPZA 4QUPA 2HMLA 1O7GA 4NBAD 3GB4A 4P1CH 3L74E 1JM1A 2BMQA 2HMKA 4AAYB 4QDCA 2YFJA 4HM3A 2E74D 2BMRA 4HM5A 4PV1D 1Q90C 4HM7A 3VCPA 1VF5D 2E75D 3L70E 5AEUA 2E76D 4OGQD 4AIVA 2ZYLA 2DE5D 4HM8A 1O7HA 3AZCA 3C0DA 1SQPE 3H1IE 1SQVE 4HM1A 2GBWA 1BE3E 1RIEA 1O7MA 2HMMA 3FOUA 2NUMA 2XR8A 1ULIA 5HL4A 3CWBE 2GBXA 3GOBA 1O7NA 4H44D 4NBHD 2HMNA 2A06E 1L0LE 2FYNC 3GL2A 3VMHD
chains in the Genus database with same CATH topology
1NTZE 3L71E 4QURA 5KLVE 1FQTA 2DE7D 2B1XA 1G8JB 4NB8D 2IBZE 2ZT9D 4NBGD 3GZYA 1KB9E 1KYOE 3L73E 4HJLA 2YFIA 2CKFA 2JO6A 3CXHE 2FYUE 2QJYC 4HM0A 2JZAA 1EG9A 4H0LD 3H1KE 3H1LE 3GL0A 2YVJB 1PP9E 3GTEA 2I7FA 1VM9A 2B24A 2E4QA 1P84E 2Q3WA 4PD4E 2NUKA 1SJGA 3D89A 3N0QA 3GKEA 2HMOA 2HMJA 4U3FE 1O7WA 1L0NE 2E4PA 2YFLA 3EN1A 1ULJA 5AEWA 2NWFA 4HM2A 5CXMA 3VMGD 1BCCE 3VMID 1UUVA 1PPJE 5BOKA 3H1HE 2BCCE 4NBDD 4NBED 1NYKA 1NTKE 2NVGA 3H1JE 4HKVA 3GZXA 1UUWA 1NDOA 1SQXE 3DQYA 1ZRTE 3GTSA 1RFSA 4HM6A 3GCEA 4NBFD 4H13D 2NVFA 1NTME 4HM4A 3CX5E 3TGUE 2YIUC 1WQLA 5KKZC 1O7PA 1G8KB 4NBCD 4QDFA 4P1BH 4QDFB 2XSHA 4NBBD 2QJKC 1EZVE 4NB9D 2XSOA 3L75E 2XRXA 2QJPC 1VCKA 2BMOA 2DE6D 3EQQA 1SQBE 4QUQA 1SQQE 3BCCE 5KLIC 4QCKA 2D2CD 3L72E 2NVEA 4QDDA 1NU1E 4EMJB 3VCAA 2QPZA 4QUPA 2HMLA 1O7GA 4NBAD 3GB4A 4P1CH 3L74E 1JM1A 2BMQA 2HMKA 4AAYB 4QDCA 2YFJA 4HM3A 2E74D 2BMRA 4HM5A 4PV1D 1Q90C 4HM7A 3VCPA 1VF5D 2E75D 3L70E 5AEUA 2E76D 4OGQD 4AIVA 2ZYLA 2DE5D 4HM8A 1O7HA 3AZCA 3C0DA 1SQPE 3H1IE 1SQVE 4HM1A 2GBWA 1BE3E 1RIEA 1O7MA 2HMMA 3FOUA 2NUMA 2XR8A 1ULIA 5HL4A 3CWBE 2GBXA 3GOBA 1O7NA 4H44D 4NBHD 2HMNA 2A06E 1L0LE 2FYNC 3GL2A 3VMHD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NTZ E;  3L71 E;  4QUR A;  5KLV E;  1FQT A;  2DE7 D;  2B1X A;  1G8J B;  4NB8 D;  2IBZ E;  2ZT9 D;  4NBG D;  3GZY A;  1KB9 E;  1KYO E;  3L73 E;  4HJL A;  2YFI A;  2CKF A;  2JO6 A;  3CXH E;  2FYU E;  2QJY C;  4HM0 A;  2JZA A;  1EG9 A;  4H0L D;  3H1K E;  3H1L E;  3GL0 A;  2YVJ B;  1PP9 E;  3GTE A;  2I7F A;  1VM9 A;  2B24 A;  2E4Q A;  1P84 E;  2Q3W A;  4PD4 E;  2NUK A;  1SJG A;  3D89 A;  3N0Q A;  3GKE A;  2HMO A;  2HMJ A;  4U3F E;  1O7W A;  1L0N E;  2E4P A;  2YFL A;  3EN1 A;  1ULJ A;  5AEW A;  2NWF A;  4HM2 A;  5CXM A;  3VMG D;  1BCC E;  3VMI D;  1UUV A;  1PPJ E;  5BOK A;  3H1H E;  2BCC E;  4NBD D;  4NBE D;  1NYK A;  1NTK E;  2NVG A;  3H1J E;  4HKV A;  3GZX A;  1UUW A;  1NDO A;  1SQX E;  3DQY A;  1ZRT E;  3GTS A;  1RFS A;  4HM6 A;  3GCE A;  4NBF D;  4H13 D;  2NVF A;  1NTM E;  4HM4 A;  3CX5 E;  3TGU E;  2YIU C;  1WQL A;  5KKZ C;  1O7P A;  1G8K B;  4NBC D;  4QDF A;  4P1B H;  4QDF B;  2XSH A;  4NBB D;  2QJK C;  1EZV E;  4NB9 D;  2XSO A;  3L75 E;  2XRX A;  2QJP C;  1VCK A;  2BMO A;  2DE6 D;  3EQQ A;  1SQB E;  4QUQ A;  1SQQ E;  3BCC E;  5KLI C;  4QCK A;  2D2C D;  3L72 E;  2NVE A;  4QDD A;  1NU1 E;  4EMJ B;  3VCA A;  2QPZ A;  4QUP A;  2HML A;  1O7G A;  4NBA D;  3GB4 A;  4P1C H;  3L74 E;  1JM1 A;  2BMQ A;  2HMK A;  4AAY B;  4QDC A;  2YFJ A;  4HM3 A;  2E74 D;  2BMR A;  4HM5 A;  4PV1 D;  1Q90 C;  4HM7 A;  3VCP A;  1VF5 D;  2E75 D;  3L70 E;  5AEU A;  2E76 D;  4OGQ D;  4AIV A;  2ZYL A;  2DE5 D;  4HM8 A;  1O7H A;  3AZC A;  3C0D A;  1SQP E;  3H1I E;  1SQV E;  4HM1 A;  2GBW A;  1BE3 E;  1RIE A;  1O7M A;  2HMM A;  3FOU A;  2NUM A;  2XR8 A;  1ULI A;  5HL4 A;  3CWB E;  2GBX A;  3GOB A;  1O7N A;  4H44 D;  4NBH D;  2HMN A;  2A06 E;  1L0L E;  2FYN C;  3GL2 A;  3VMH D; 
#chains in the Genus database with same CATH topology
 1NTZ E;  3L71 E;  4QUR A;  5KLV E;  1FQT A;  2DE7 D;  2B1X A;  1G8J B;  4NB8 D;  2IBZ E;  2ZT9 D;  4NBG D;  3GZY A;  1KB9 E;  1KYO E;  3L73 E;  4HJL A;  2YFI A;  2CKF A;  2JO6 A;  3CXH E;  2FYU E;  2QJY C;  4HM0 A;  2JZA A;  1EG9 A;  4H0L D;  3H1K E;  3H1L E;  3GL0 A;  2YVJ B;  1PP9 E;  3GTE A;  2I7F A;  1VM9 A;  2B24 A;  2E4Q A;  1P84 E;  2Q3W A;  4PD4 E;  2NUK A;  1SJG A;  3D89 A;  3N0Q A;  3GKE A;  2HMO A;  2HMJ A;  4U3F E;  1O7W A;  1L0N E;  2E4P A;  2YFL A;  3EN1 A;  1ULJ A;  5AEW A;  2NWF A;  4HM2 A;  5CXM A;  3VMG D;  1BCC E;  3VMI D;  1UUV A;  1PPJ E;  5BOK A;  3H1H E;  2BCC E;  4NBD D;  4NBE D;  1NYK A;  1NTK E;  2NVG A;  3H1J E;  4HKV A;  3GZX A;  1UUW A;  1NDO A;  1SQX E;  3DQY A;  1ZRT E;  3GTS A;  1RFS A;  4HM6 A;  3GCE A;  4NBF D;  4H13 D;  2NVF A;  1NTM E;  4HM4 A;  3CX5 E;  3TGU E;  2YIU C;  1WQL A;  5KKZ C;  1O7P A;  1G8K B;  4NBC D;  4QDF A;  4P1B H;  4QDF B;  2XSH A;  4NBB D;  2QJK C;  1EZV E;  4NB9 D;  2XSO A;  3L75 E;  2XRX A;  2QJP C;  1VCK A;  2BMO A;  2DE6 D;  3EQQ A;  1SQB E;  4QUQ A;  1SQQ E;  3BCC E;  5KLI C;  4QCK A;  2D2C D;  3L72 E;  2NVE A;  4QDD A;  1NU1 E;  4EMJ B;  3VCA A;  2QPZ A;  4QUP A;  2HML A;  1O7G A;  4NBA D;  3GB4 A;  4P1C H;  3L74 E;  1JM1 A;  2BMQ A;  2HMK A;  4AAY B;  4QDC A;  2YFJ A;  4HM3 A;  2E74 D;  2BMR A;  4HM5 A;  4PV1 D;  1Q90 C;  4HM7 A;  3VCP A;  1VF5 D;  2E75 D;  3L70 E;  5AEU A;  2E76 D;  4OGQ D;  4AIV A;  2ZYL A;  2DE5 D;  4HM8 A;  1O7H A;  3AZC A;  3C0D A;  1SQP E;  3H1I E;  1SQV E;  4HM1 A;  2GBW A;  1BE3 E;  1RIE A;  1O7M A;  2HMM A;  3FOU A;  2NUM A;  2XR8 A;  1ULI A;  5HL4 A;  3CWB E;  2GBX A;  3GOB A;  1O7N A;  4H44 D;  4NBH D;  2HMN A;  2A06 E;  1L0L E;  2FYN C;  3GL2 A;  3VMH D; 
#chains in the Genus database with same CATH homology
 1NTZ E;  3L71 E;  4QUR A;  5KLV E;  1FQT A;  2DE7 D;  2B1X A;  1G8J B;  4NB8 D;  2IBZ E;  2ZT9 D;  4NBG D;  3GZY A;  1KB9 E;  1KYO E;  3L73 E;  4HJL A;  2YFI A;  2CKF A;  2JO6 A;  3CXH E;  2FYU E;  2QJY C;  4HM0 A;  2JZA A;  1EG9 A;  4H0L D;  3H1K E;  3H1L E;  3GL0 A;  2YVJ B;  1PP9 E;  3GTE A;  2I7F A;  1VM9 A;  2B24 A;  2E4Q A;  1P84 E;  2Q3W A;  4PD4 E;  2NUK A;  1SJG A;  3D89 A;  3N0Q A;  3GKE A;  2HMO A;  2HMJ A;  4U3F E;  1O7W A;  1L0N E;  2E4P A;  2YFL A;  3EN1 A;  1ULJ A;  5AEW A;  2NWF A;  4HM2 A;  5CXM A;  3VMG D;  1BCC E;  3VMI D;  1UUV A;  1PPJ E;  5BOK A;  3H1H E;  2BCC E;  4NBD D;  4NBE D;  1NYK A;  1NTK E;  2NVG A;  3H1J E;  4HKV A;  3GZX A;  1UUW A;  1NDO A;  1SQX E;  3DQY A;  1ZRT E;  3GTS A;  1RFS A;  4HM6 A;  3GCE A;  4NBF D;  4H13 D;  2NVF A;  1NTM E;  4HM4 A;  3CX5 E;  3TGU E;  2YIU C;  1WQL A;  5KKZ C;  1O7P A;  1G8K B;  4NBC D;  4QDF A;  4P1B H;  4QDF B;  2XSH A;  4NBB D;  2QJK C;  1EZV E;  4NB9 D;  2XSO A;  3L75 E;  2XRX A;  2QJP C;  1VCK A;  2BMO A;  2DE6 D;  3EQQ A;  1SQB E;  4QUQ A;  1SQQ E;  3BCC E;  5KLI C;  4QCK A;  2D2C D;  3L72 E;  2NVE A;  4QDD A;  1NU1 E;  4EMJ B;  3VCA A;  2QPZ A;  4QUP A;  2HML A;  1O7G A;  4NBA D;  3GB4 A;  4P1C H;  3L74 E;  1JM1 A;  2BMQ A;  2HMK A;  4AAY B;  4QDC A;  2YFJ A;  4HM3 A;  2E74 D;  2BMR A;  4HM5 A;  4PV1 D;  1Q90 C;  4HM7 A;  3VCP A;  1VF5 D;  2E75 D;  3L70 E;  5AEU A;  2E76 D;  4OGQ D;  4AIV A;  2ZYL A;  2DE5 D;  4HM8 A;  1O7H A;  3AZC A;  3C0D A;  1SQP E;  3H1I E;  1SQV E;  4HM1 A;  2GBW A;  1BE3 E;  1RIE A;  1O7M A;  2HMM A;  3FOU A;  2NUM A;  2XR8 A;  1ULI A;  5HL4 A;  3CWB E;  2GBX A;  3GOB A;  1O7N A;  4H44 D;  4NBH D;  2HMN A;  2A06 E;  1L0L E;  2FYN C;  3GL2 A;  3VMH D; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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