4AAYB

Crystal structure of the arsenite oxidase protein complex from rhizobium species strain nt-26
Total Genus 26

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
132
structure length
132
Chain Sequence
AAGVEYPANRLANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFSTICPHKGFPLSYSADNKTFNCPGHFSVFDPEKGGQQVWGQATQNLPQYVLRVADNGDIFAEGVDELIYGRLSNVL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI5 (129-132)S2 (66-69)TVIb1 (69-72)S7 (127-129)3H1 (57-59)TIV2 (103-106)S1 (52-56)S3 (76-81)TI1 (72-75)S4 (96-100)TI2 (91-94)TIV4 (121-124)S6 (118-120)S5 (111-113)TI3 (113-116)TI4 (114-117)TII2 (86-89)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Arsenite-oxidising bacterium nt-26
publication title The Respiratory Arsenite Oxidase: Structure and the Role of Residues Surrounding the Rieske Cluster.
pubmed doi rcsb
molecule keywords AROA
total genus 26
structure length 132
sequence length 132
chains with identical sequence D, F, H
ec nomenclature
pdb deposition date 2011-12-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00355 Rieske Rieske [2Fe-2S] domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domain 4aayB00
1L0LE 1O7WA 2I7FA 1PP9E 4OGQD 3DQYA 2HMLA 2NVGA 3GOBA 1O7NA 3BCCE 1KB9E 1SQQE 4HM5A 1KYOE 2YFLA 4HM3A 4HM7A 4H0LD 4NBED 4H44D 2E74D 2BMRA 1NTKE 5KLVE 1JM1A 2HMNA 3CX5E 4QDDA 1FQTA 1BCCE 1ULIA 2HMJA 3GTEA 3TGUE 1O7HA 3GL2A 2QJKC 3D89A 3L70E 4QUQA 2E76D 4HM1A 3H1HE 4AIVA 1NTZE 1ZRTE 1NU1E 3FOUA 2HMMA 2CKFA 5CXMA 1SQVE 3VCAA 3AZCA 2QJYC 1SQBE 5AEWA 5KLIC 1BE3E 4NBHD 1UUWA 1SQXE 4H13D 2XR8A 2YFJA 2YIUC 3H1LE 2NWFA 3C0DA 3GB4A 4NB9D 3GZYA 2NVEA 1P84E 2ZT9D 2DE6D 4NBGD 4HM6A 1SQPE 1UUVA 3VCPA 2B24A 2Q3WA 1SJGA 4HM2A 5BOKA 4NB8D 2JO6A 1ULJA 2DE5D 2NUKA 4NBFD 4EMJB 3EQQA 2GBWA 1G8KB 2JZAA 1O7GA 4P1BH 1EZVE 2FYUE 1VM9A 2XSOA 3CWBE 1NYKA 1O7PA 3L74E 2ZYLA 4NBBD 2NUMA 3GCEA 4QDFA 1VF5D 1RIEA 3VMGD 3GTSA 1WQLA 2B1XA 4HJLA 4P1CH 4HKVA 2YFIA 3N0QA 1RFSA 3EN1A 4QUPA 1EG9A 2NVFA 3VMID 5AEUA 1NTME 2XSHA 2QJPC 4HM4A 4QDFB 4U3FE 2GBXA 5KKZC 2A06E 2E75D 4HM0A 4NBAD 2HMKA 4PV1D 4QDCA 1O7MA 2D2CD 3H1KE 4QCKA 1VCKA 2IBZE 2DE7D 2BCCE 1G8JB 1NDOA 5HL4A 1L0NE 2FYNC 4HM8A 3GZXA 2QPZA 3GKEA 2HMOA 3L71E 4QURA 4PD4E 3L73E 2E4PA 4AAYB 2XRXA 3H1JE 2BMOA 1Q90C 3L75E 3CXHE 2BMQA 4NBDD 3VMHD 2YVJB 3GL0A 2E4QA 3H1IE 1PPJE 3L72E 4NBCD
chains in the Genus database with same CATH superfamily
1L0LE 1O7WA 2I7FA 1PP9E 4OGQD 3DQYA 2HMLA 2NVGA 3GOBA 1O7NA 3BCCE 1KB9E 1SQQE 4HM5A 1KYOE 2YFLA 4HM3A 4HM7A 4H0LD 4NBED 4H44D 2E74D 2BMRA 1NTKE 5KLVE 1JM1A 2HMNA 3CX5E 4QDDA 1FQTA 1BCCE 1ULIA 2HMJA 3GTEA 3TGUE 1O7HA 3GL2A 2QJKC 3D89A 3L70E 4QUQA 2E76D 4HM1A 3H1HE 4AIVA 1NTZE 1ZRTE 1NU1E 3FOUA 2HMMA 2CKFA 5CXMA 1SQVE 3VCAA 3AZCA 2QJYC 1SQBE 5AEWA 5KLIC 1BE3E 4NBHD 1UUWA 1SQXE 4H13D 2XR8A 2YFJA 2YIUC 3H1LE 2NWFA 3C0DA 3GB4A 4NB9D 3GZYA 2NVEA 1P84E 2ZT9D 2DE6D 4NBGD 4HM6A 1SQPE 1UUVA 3VCPA 2B24A 2Q3WA 1SJGA 4HM2A 5BOKA 4NB8D 2JO6A 1ULJA 2DE5D 2NUKA 4NBFD 4EMJB 3EQQA 2GBWA 1G8KB 2JZAA 1O7GA 4P1BH 1EZVE 2FYUE 1VM9A 2XSOA 3CWBE 1NYKA 1O7PA 3L74E 2ZYLA 4NBBD 2NUMA 3GCEA 4QDFA 1VF5D 1RIEA 3VMGD 3GTSA 1WQLA 2B1XA 4HJLA 4P1CH 4HKVA 2YFIA 3N0QA 1RFSA 3EN1A 4QUPA 1EG9A 2NVFA 3VMID 5AEUA 1NTME 2XSHA 2QJPC 4HM4A 4QDFB 4U3FE 2GBXA 5KKZC 2A06E 2E75D 4HM0A 4NBAD 2HMKA 4PV1D 4QDCA 1O7MA 2D2CD 3H1KE 4QCKA 1VCKA 2IBZE 2DE7D 2BCCE 1G8JB 1NDOA 5HL4A 1L0NE 2FYNC 4HM8A 3GZXA 2QPZA 3GKEA 2HMOA 3L71E 4QURA 4PD4E 3L73E 2E4PA 4AAYB 2XRXA 3H1JE 2BMOA 1Q90C 3L75E 3CXHE 2BMQA 4NBDD 3VMHD 2YVJB 3GL0A 2E4QA 3H1IE 1PPJE 3L72E 4NBCD
chains in the Genus database with same CATH topology
1L0LE 1O7WA 2I7FA 1PP9E 4OGQD 3DQYA 2HMLA 2NVGA 3GOBA 1O7NA 3BCCE 1KB9E 1SQQE 4HM5A 1KYOE 2YFLA 4HM3A 4HM7A 4H0LD 4NBED 4H44D 2E74D 2BMRA 1NTKE 5KLVE 1JM1A 2HMNA 3CX5E 4QDDA 1FQTA 1BCCE 1ULIA 2HMJA 3GTEA 3TGUE 1O7HA 3GL2A 2QJKC 3D89A 3L70E 4QUQA 2E76D 4HM1A 3H1HE 4AIVA 1NTZE 1ZRTE 1NU1E 3FOUA 2HMMA 2CKFA 5CXMA 1SQVE 3VCAA 3AZCA 2QJYC 1SQBE 5AEWA 5KLIC 1BE3E 4NBHD 1UUWA 1SQXE 4H13D 2XR8A 2YFJA 2YIUC 3H1LE 2NWFA 3C0DA 3GB4A 4NB9D 3GZYA 2NVEA 1P84E 2ZT9D 2DE6D 4NBGD 4HM6A 1SQPE 1UUVA 3VCPA 2B24A 2Q3WA 1SJGA 4HM2A 5BOKA 4NB8D 2JO6A 1ULJA 2DE5D 2NUKA 4NBFD 4EMJB 3EQQA 2GBWA 1G8KB 2JZAA 1O7GA 4P1BH 1EZVE 2FYUE 1VM9A 2XSOA 3CWBE 1NYKA 1O7PA 3L74E 2ZYLA 4NBBD 2NUMA 3GCEA 4QDFA 1VF5D 1RIEA 3VMGD 3GTSA 1WQLA 2B1XA 4HJLA 4P1CH 4HKVA 2YFIA 3N0QA 1RFSA 3EN1A 4QUPA 1EG9A 2NVFA 3VMID 5AEUA 1NTME 2XSHA 2QJPC 4HM4A 4QDFB 4U3FE 2GBXA 5KKZC 2A06E 2E75D 4HM0A 4NBAD 2HMKA 4PV1D 4QDCA 1O7MA 2D2CD 3H1KE 4QCKA 1VCKA 2IBZE 2DE7D 2BCCE 1G8JB 1NDOA 5HL4A 1L0NE 2FYNC 4HM8A 3GZXA 2QPZA 3GKEA 2HMOA 3L71E 4QURA 4PD4E 3L73E 2E4PA 4AAYB 2XRXA 3H1JE 2BMOA 1Q90C 3L75E 3CXHE 2BMQA 4NBDD 3VMHD 2YVJB 3GL0A 2E4QA 3H1IE 1PPJE 3L72E 4NBCD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1L0L E;  1O7W A;  2I7F A;  1PP9 E;  4OGQ D;  3DQY A;  2HML A;  2NVG A;  3GOB A;  1O7N A;  3BCC E;  1KB9 E;  1SQQ E;  4HM5 A;  1KYO E;  2YFL A;  4HM3 A;  4HM7 A;  4H0L D;  4NBE D;  4H44 D;  2E74 D;  2BMR A;  1NTK E;  5KLV E;  1JM1 A;  2HMN A;  3CX5 E;  4QDD A;  1FQT A;  1BCC E;  1ULI A;  2HMJ A;  3GTE A;  3TGU E;  1O7H A;  3GL2 A;  2QJK C;  3D89 A;  3L70 E;  4QUQ A;  2E76 D;  4HM1 A;  3H1H E;  4AIV A;  1NTZ E;  1ZRT E;  1NU1 E;  3FOU A;  2HMM A;  2CKF A;  5CXM A;  1SQV E;  3VCA A;  3AZC A;  2QJY C;  1SQB E;  5AEW A;  5KLI C;  1BE3 E;  4NBH D;  1UUW A;  1SQX E;  4H13 D;  2XR8 A;  2YFJ A;  2YIU C;  3H1L E;  2NWF A;  3C0D A;  3GB4 A;  4NB9 D;  3GZY A;  2NVE A;  1P84 E;  2ZT9 D;  2DE6 D;  4NBG D;  4HM6 A;  1SQP E;  1UUV A;  3VCP A;  2B24 A;  2Q3W A;  1SJG A;  4HM2 A;  5BOK A;  4NB8 D;  2JO6 A;  1ULJ A;  2DE5 D;  2NUK A;  4NBF D;  4EMJ B;  3EQQ A;  2GBW A;  1G8K B;  2JZA A;  1O7G A;  4P1B H;  1EZV E;  2FYU E;  1VM9 A;  2XSO A;  3CWB E;  1NYK A;  1O7P A;  3L74 E;  2ZYL A;  4NBB D;  2NUM A;  3GCE A;  4QDF A;  1VF5 D;  1RIE A;  3VMG D;  3GTS A;  1WQL A;  2B1X A;  4HJL A;  4P1C H;  4HKV A;  2YFI A;  3N0Q A;  1RFS A;  3EN1 A;  4QUP A;  1EG9 A;  2NVF A;  3VMI D;  5AEU A;  1NTM E;  2XSH A;  2QJP C;  4HM4 A;  4QDF B;  4U3F E;  2GBX A;  5KKZ C;  2A06 E;  2E75 D;  4HM0 A;  4NBA D;  2HMK A;  4PV1 D;  4QDC A;  1O7M A;  2D2C D;  3H1K E;  4QCK A;  1VCK A;  2IBZ E;  2DE7 D;  2BCC E;  1G8J B;  1NDO A;  5HL4 A;  1L0N E;  2FYN C;  4HM8 A;  3GZX A;  2QPZ A;  3GKE A;  2HMO A;  3L71 E;  4QUR A;  4PD4 E;  3L73 E;  2E4P A;  4AAY B;  2XRX A;  3H1J E;  2BMO A;  1Q90 C;  3L75 E;  3CXH E;  2BMQ A;  4NBD D;  3VMH D;  2YVJ B;  3GL0 A;  2E4Q A;  3H1I E;  1PPJ E;  3L72 E;  4NBC D; 
#chains in the Genus database with same CATH topology
 1L0L E;  1O7W A;  2I7F A;  1PP9 E;  4OGQ D;  3DQY A;  2HML A;  2NVG A;  3GOB A;  1O7N A;  3BCC E;  1KB9 E;  1SQQ E;  4HM5 A;  1KYO E;  2YFL A;  4HM3 A;  4HM7 A;  4H0L D;  4NBE D;  4H44 D;  2E74 D;  2BMR A;  1NTK E;  5KLV E;  1JM1 A;  2HMN A;  3CX5 E;  4QDD A;  1FQT A;  1BCC E;  1ULI A;  2HMJ A;  3GTE A;  3TGU E;  1O7H A;  3GL2 A;  2QJK C;  3D89 A;  3L70 E;  4QUQ A;  2E76 D;  4HM1 A;  3H1H E;  4AIV A;  1NTZ E;  1ZRT E;  1NU1 E;  3FOU A;  2HMM A;  2CKF A;  5CXM A;  1SQV E;  3VCA A;  3AZC A;  2QJY C;  1SQB E;  5AEW A;  5KLI C;  1BE3 E;  4NBH D;  1UUW A;  1SQX E;  4H13 D;  2XR8 A;  2YFJ A;  2YIU C;  3H1L E;  2NWF A;  3C0D A;  3GB4 A;  4NB9 D;  3GZY A;  2NVE A;  1P84 E;  2ZT9 D;  2DE6 D;  4NBG D;  4HM6 A;  1SQP E;  1UUV A;  3VCP A;  2B24 A;  2Q3W A;  1SJG A;  4HM2 A;  5BOK A;  4NB8 D;  2JO6 A;  1ULJ A;  2DE5 D;  2NUK A;  4NBF D;  4EMJ B;  3EQQ A;  2GBW A;  1G8K B;  2JZA A;  1O7G A;  4P1B H;  1EZV E;  2FYU E;  1VM9 A;  2XSO A;  3CWB E;  1NYK A;  1O7P A;  3L74 E;  2ZYL A;  4NBB D;  2NUM A;  3GCE A;  4QDF A;  1VF5 D;  1RIE A;  3VMG D;  3GTS A;  1WQL A;  2B1X A;  4HJL A;  4P1C H;  4HKV A;  2YFI A;  3N0Q A;  1RFS A;  3EN1 A;  4QUP A;  1EG9 A;  2NVF A;  3VMI D;  5AEU A;  1NTM E;  2XSH A;  2QJP C;  4HM4 A;  4QDF B;  4U3F E;  2GBX A;  5KKZ C;  2A06 E;  2E75 D;  4HM0 A;  4NBA D;  2HMK A;  4PV1 D;  4QDC A;  1O7M A;  2D2C D;  3H1K E;  4QCK A;  1VCK A;  2IBZ E;  2DE7 D;  2BCC E;  1G8J B;  1NDO A;  5HL4 A;  1L0N E;  2FYN C;  4HM8 A;  3GZX A;  2QPZ A;  3GKE A;  2HMO A;  3L71 E;  4QUR A;  4PD4 E;  3L73 E;  2E4P A;  4AAY B;  2XRX A;  3H1J E;  2BMO A;  1Q90 C;  3L75 E;  3CXH E;  2BMQ A;  4NBD D;  3VMH D;  2YVJ B;  3GL0 A;  2E4Q A;  3H1I E;  1PPJ E;  3L72 E;  4NBC D; 
#chains in the Genus database with same CATH homology
 1L0L E;  1O7W A;  2I7F A;  1PP9 E;  4OGQ D;  3DQY A;  2HML A;  2NVG A;  3GOB A;  1O7N A;  3BCC E;  1KB9 E;  1SQQ E;  4HM5 A;  1KYO E;  2YFL A;  4HM3 A;  4HM7 A;  4H0L D;  4NBE D;  4H44 D;  2E74 D;  2BMR A;  1NTK E;  5KLV E;  1JM1 A;  2HMN A;  3CX5 E;  4QDD A;  1FQT A;  1BCC E;  1ULI A;  2HMJ A;  3GTE A;  3TGU E;  1O7H A;  3GL2 A;  2QJK C;  3D89 A;  3L70 E;  4QUQ A;  2E76 D;  4HM1 A;  3H1H E;  4AIV A;  1NTZ E;  1ZRT E;  1NU1 E;  3FOU A;  2HMM A;  2CKF A;  5CXM A;  1SQV E;  3VCA A;  3AZC A;  2QJY C;  1SQB E;  5AEW A;  5KLI C;  1BE3 E;  4NBH D;  1UUW A;  1SQX E;  4H13 D;  2XR8 A;  2YFJ A;  2YIU C;  3H1L E;  2NWF A;  3C0D A;  3GB4 A;  4NB9 D;  3GZY A;  2NVE A;  1P84 E;  2ZT9 D;  2DE6 D;  4NBG D;  4HM6 A;  1SQP E;  1UUV A;  3VCP A;  2B24 A;  2Q3W A;  1SJG A;  4HM2 A;  5BOK A;  4NB8 D;  2JO6 A;  1ULJ A;  2DE5 D;  2NUK A;  4NBF D;  4EMJ B;  3EQQ A;  2GBW A;  1G8K B;  2JZA A;  1O7G A;  4P1B H;  1EZV E;  2FYU E;  1VM9 A;  2XSO A;  3CWB E;  1NYK A;  1O7P A;  3L74 E;  2ZYL A;  4NBB D;  2NUM A;  3GCE A;  4QDF A;  1VF5 D;  1RIE A;  3VMG D;  3GTS A;  1WQL A;  2B1X A;  4HJL A;  4P1C H;  4HKV A;  2YFI A;  3N0Q A;  1RFS A;  3EN1 A;  4QUP A;  1EG9 A;  2NVF A;  3VMI D;  5AEU A;  1NTM E;  2XSH A;  2QJP C;  4HM4 A;  4QDF B;  4U3F E;  2GBX A;  5KKZ C;  2A06 E;  2E75 D;  4HM0 A;  4NBA D;  2HMK A;  4PV1 D;  4QDC A;  1O7M A;  2D2C D;  3H1K E;  4QCK A;  1VCK A;  2IBZ E;  2DE7 D;  2BCC E;  1G8J B;  1NDO A;  5HL4 A;  1L0N E;  2FYN C;  4HM8 A;  3GZX A;  2QPZ A;  3GKE A;  2HMO A;  3L71 E;  4QUR A;  4PD4 E;  3L73 E;  2E4P A;  4AAY B;  2XRX A;  3H1J E;  2BMO A;  1Q90 C;  3L75 E;  3CXH E;  2BMQ A;  4NBD D;  3VMH D;  2YVJ B;  3GL0 A;  2E4Q A;  3H1I E;  1PPJ E;  3L72 E;  4NBC D; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.