4NBHD

Carbazole-bound oxygenase with gln282 replaced by tyr and ferredoxin complex of carbazole 1,9a-dioxygenase
Total Genus 18

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
104
structure length
104
Chain Sequence
IWLKVCAASDMQPGTIRRVNRVGAAPLAVYRVGDQFYATEDTCTHGIASLSEGTLDGDVIECPFHGGAFNVCTGMPASSPCTVPLGVFEVEVKEGEVYVAGEKK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (5-10)S9 (91-96)S3 (30-35)TI1 (10-13)TII1 (15-18)TI2 (11-14)EMPTYS2 (18-22)S10 (99-106)S4 (38-43)TII2 (24-27)TIV1 (34-37)TVIa1 (81-84)3H1 (53-55)TIV2 (58-61)S5 (57-59)S7 (71-73)TIV4 (66-69)TI4 (74-77)TIV3 (65-68)TIV5 (73-76)TIV6 (82-85)TIV7 (95-98)TI3 (46-49)S6 (62-64)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Janthinobacterium
publication title Structural Basis of the Divergent Oxygenation Reactions Catalyzed by the Rieske Non-heme Iron Oxygenase, Carbazole 1,9a-Dioxygenase
pubmed doi rcsb
molecule keywords Terminal oxygenase component of carbazole
total genus 18
structure length 104
sequence length 104
chains with identical sequence E, F
ec nomenclature ec 1.14.12.22: Carbazole 1,9a-dioxygenase.
pdb deposition date 2013-10-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00355 Rieske Rieske [2Fe-2S] domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domain 4nbhD00
2XRXA 5HL4A 2HMNA 2B1XA 4NBBD 2E76D 1NTME 1VM9A 4AIVA 3D89A 1Q90C 4HM2A 3FOUA 2ZT9D 4NBCD 1BCCE 1RIEA 3CWBE 1EG9A 2HMMA 1NDOA 3GL0A 2HMKA 1O7GA 4HKVA 2HMOA 1O7WA 4QUPA 3L71E 3GZXA 2IBZE 1NYKA 4H44D 2E75D 2HMLA 3N0QA 2BMQA 1EZVE 2NVEA 2HMJA 3GKEA 1KYOE 2XSHA 3EN1A 3GL2A 3CXHE 2QPZA 2I7FA 3H1KE 1O7PA 3VMID 2FYUE 1SQQE 4HM7A 1UUWA 4HM5A 5KKZC 2DE6D 4QDDA 4NB9D 5BOKA 1BE3E 3AZCA 5KLIC 3H1IE 5KLVE 3VCPA 3L74E 2JO6A 2YFIA 2QJPC 4OGQD 5CXMA 1FQTA 4P1CH 1NTKE 3GB4A 4HM0A 3L73E 3H1LE 4HJLA 1WQLA 2JZAA 4H13D 4NB8D 3L70E 2CKFA 5AEUA 1SQBE 1PPJE 1O7MA 2E4QA 1SQVE 4PD4E 4EMJB 3GCEA 1ULIA 4NBDD 1O7HA 4HM4A 4NBAD 2QJYC 3GOBA 4AAYB 3L72E 4HM6A 4HM8A 2DE5D 4QURA 1P84E 3CX5E 1ULJA 1VCKA 2NUKA 4QDFB 4NBGD 2XSOA 3L75E 2A06E 3EQQA 1L0LE 1SQPE 2D2CD 4H0LD 1JM1A 2NWFA 4PV1D 2QJKC 1SJGA 3GZYA 3VCAA 3GTSA 2YFLA 4QCKA 1G8KB 2Q3WA 4HM3A 2YFJA 3TGUE 3H1HE 3BCCE 3VMHD 3C0DA 1ZRTE 2GBXA 1L0NE 1NTZE 1G8JB 2XR8A 3H1JE 2E4PA 4P1BH 2BMRA 2FYNC 3DQYA 4NBFD 2NVGA 2DE7D 1NU1E 1PP9E 2BMOA 4QDFA 3GTEA 4QDCA 2GBWA 1RFSA 4U3FE 2NUMA 5AEWA 4NBHD 2BCCE 2ZYLA 4HM1A 4NBED 4QUQA 1VF5D 1O7NA 2YIUC 2YVJB 1SQXE 1UUVA 1KB9E 2B24A 2NVFA 3VMGD 2E74D
chains in the Genus database with same CATH superfamily
2XRXA 5HL4A 2HMNA 2B1XA 4NBBD 2E76D 1NTME 1VM9A 4AIVA 3D89A 1Q90C 4HM2A 3FOUA 2ZT9D 4NBCD 1BCCE 1RIEA 3CWBE 1EG9A 2HMMA 1NDOA 3GL0A 2HMKA 1O7GA 4HKVA 2HMOA 1O7WA 4QUPA 3L71E 3GZXA 2IBZE 1NYKA 4H44D 2E75D 2HMLA 3N0QA 2BMQA 1EZVE 2NVEA 2HMJA 3GKEA 1KYOE 2XSHA 3EN1A 3GL2A 3CXHE 2QPZA 2I7FA 3H1KE 1O7PA 3VMID 2FYUE 1SQQE 4HM7A 1UUWA 4HM5A 5KKZC 2DE6D 4QDDA 4NB9D 5BOKA 1BE3E 3AZCA 5KLIC 3H1IE 5KLVE 3VCPA 3L74E 2JO6A 2YFIA 2QJPC 4OGQD 5CXMA 1FQTA 4P1CH 1NTKE 3GB4A 4HM0A 3L73E 3H1LE 4HJLA 1WQLA 2JZAA 4H13D 4NB8D 3L70E 2CKFA 5AEUA 1SQBE 1PPJE 1O7MA 2E4QA 1SQVE 4PD4E 4EMJB 3GCEA 1ULIA 4NBDD 1O7HA 4HM4A 4NBAD 2QJYC 3GOBA 4AAYB 3L72E 4HM6A 4HM8A 2DE5D 4QURA 1P84E 3CX5E 1ULJA 1VCKA 2NUKA 4QDFB 4NBGD 2XSOA 3L75E 2A06E 3EQQA 1L0LE 1SQPE 2D2CD 4H0LD 1JM1A 2NWFA 4PV1D 2QJKC 1SJGA 3GZYA 3VCAA 3GTSA 2YFLA 4QCKA 1G8KB 2Q3WA 4HM3A 2YFJA 3TGUE 3H1HE 3BCCE 3VMHD 3C0DA 1ZRTE 2GBXA 1L0NE 1NTZE 1G8JB 2XR8A 3H1JE 2E4PA 4P1BH 2BMRA 2FYNC 3DQYA 4NBFD 2NVGA 2DE7D 1NU1E 1PP9E 2BMOA 4QDFA 3GTEA 4QDCA 2GBWA 1RFSA 4U3FE 2NUMA 5AEWA 4NBHD 2BCCE 2ZYLA 4HM1A 4NBED 4QUQA 1VF5D 1O7NA 2YIUC 2YVJB 1SQXE 1UUVA 1KB9E 2B24A 2NVFA 3VMGD 2E74D
chains in the Genus database with same CATH topology
2XRXA 5HL4A 2HMNA 2B1XA 4NBBD 2E76D 1NTME 1VM9A 4AIVA 3D89A 1Q90C 4HM2A 3FOUA 2ZT9D 4NBCD 1BCCE 1RIEA 3CWBE 1EG9A 2HMMA 1NDOA 3GL0A 2HMKA 1O7GA 4HKVA 2HMOA 1O7WA 4QUPA 3L71E 3GZXA 2IBZE 1NYKA 4H44D 2E75D 2HMLA 3N0QA 2BMQA 1EZVE 2NVEA 2HMJA 3GKEA 1KYOE 2XSHA 3EN1A 3GL2A 3CXHE 2QPZA 2I7FA 3H1KE 1O7PA 3VMID 2FYUE 1SQQE 4HM7A 1UUWA 4HM5A 5KKZC 2DE6D 4QDDA 4NB9D 5BOKA 1BE3E 3AZCA 5KLIC 3H1IE 5KLVE 3VCPA 3L74E 2JO6A 2YFIA 2QJPC 4OGQD 5CXMA 1FQTA 4P1CH 1NTKE 3GB4A 4HM0A 3L73E 3H1LE 4HJLA 1WQLA 2JZAA 4H13D 4NB8D 3L70E 2CKFA 5AEUA 1SQBE 1PPJE 1O7MA 2E4QA 1SQVE 4PD4E 4EMJB 3GCEA 1ULIA 4NBDD 1O7HA 4HM4A 4NBAD 2QJYC 3GOBA 4AAYB 3L72E 4HM6A 4HM8A 2DE5D 4QURA 1P84E 3CX5E 1ULJA 1VCKA 2NUKA 4QDFB 4NBGD 2XSOA 3L75E 2A06E 3EQQA 1L0LE 1SQPE 2D2CD 4H0LD 1JM1A 2NWFA 4PV1D 2QJKC 1SJGA 3GZYA 3VCAA 3GTSA 2YFLA 4QCKA 1G8KB 2Q3WA 4HM3A 2YFJA 3TGUE 3H1HE 3BCCE 3VMHD 3C0DA 1ZRTE 2GBXA 1L0NE 1NTZE 1G8JB 2XR8A 3H1JE 2E4PA 4P1BH 2BMRA 2FYNC 3DQYA 4NBFD 2NVGA 2DE7D 1NU1E 1PP9E 2BMOA 4QDFA 3GTEA 4QDCA 2GBWA 1RFSA 4U3FE 2NUMA 5AEWA 4NBHD 2BCCE 2ZYLA 4HM1A 4NBED 4QUQA 1VF5D 1O7NA 2YIUC 2YVJB 1SQXE 1UUVA 1KB9E 2B24A 2NVFA 3VMGD 2E74D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XRX A;  5HL4 A;  2HMN A;  2B1X A;  4NBB D;  2E76 D;  1NTM E;  1VM9 A;  4AIV A;  3D89 A;  1Q90 C;  4HM2 A;  3FOU A;  2ZT9 D;  4NBC D;  1BCC E;  1RIE A;  3CWB E;  1EG9 A;  2HMM A;  1NDO A;  3GL0 A;  2HMK A;  1O7G A;  4HKV A;  2HMO A;  1O7W A;  4QUP A;  3L71 E;  3GZX A;  2IBZ E;  1NYK A;  4H44 D;  2E75 D;  2HML A;  3N0Q A;  2BMQ A;  1EZV E;  2NVE A;  2HMJ A;  3GKE A;  1KYO E;  2XSH A;  3EN1 A;  3GL2 A;  3CXH E;  2QPZ A;  2I7F A;  3H1K E;  1O7P A;  3VMI D;  2FYU E;  1SQQ E;  4HM7 A;  1UUW A;  4HM5 A;  5KKZ C;  2DE6 D;  4QDD A;  4NB9 D;  5BOK A;  1BE3 E;  3AZC A;  5KLI C;  3H1I E;  5KLV E;  3VCP A;  3L74 E;  2JO6 A;  2YFI A;  2QJP C;  4OGQ D;  5CXM A;  1FQT A;  4P1C H;  1NTK E;  3GB4 A;  4HM0 A;  3L73 E;  3H1L E;  4HJL A;  1WQL A;  2JZA A;  4H13 D;  4NB8 D;  3L70 E;  2CKF A;  5AEU A;  1SQB E;  1PPJ E;  1O7M A;  2E4Q A;  1SQV E;  4PD4 E;  4EMJ B;  3GCE A;  1ULI A;  4NBD D;  1O7H A;  4HM4 A;  4NBA D;  2QJY C;  3GOB A;  4AAY B;  3L72 E;  4HM6 A;  4HM8 A;  2DE5 D;  4QUR A;  1P84 E;  3CX5 E;  1ULJ A;  1VCK A;  2NUK A;  4QDF B;  4NBG D;  2XSO A;  3L75 E;  2A06 E;  3EQQ A;  1L0L E;  1SQP E;  2D2C D;  4H0L D;  1JM1 A;  2NWF A;  4PV1 D;  2QJK C;  1SJG A;  3GZY A;  3VCA A;  3GTS A;  2YFL A;  4QCK A;  1G8K B;  2Q3W A;  4HM3 A;  2YFJ A;  3TGU E;  3H1H E;  3BCC E;  3VMH D;  3C0D A;  1ZRT E;  2GBX A;  1L0N E;  1NTZ E;  1G8J B;  2XR8 A;  3H1J E;  2E4P A;  4P1B H;  2BMR A;  2FYN C;  3DQY A;  4NBF D;  2NVG A;  2DE7 D;  1NU1 E;  1PP9 E;  2BMO A;  4QDF A;  3GTE A;  4QDC A;  2GBW A;  1RFS A;  4U3F E;  2NUM A;  5AEW A;  4NBH D;  2BCC E;  2ZYL A;  4HM1 A;  4NBE D;  4QUQ A;  1VF5 D;  1O7N A;  2YIU C;  2YVJ B;  1SQX E;  1UUV A;  1KB9 E;  2B24 A;  2NVF A;  3VMG D;  2E74 D; 
#chains in the Genus database with same CATH topology
 2XRX A;  5HL4 A;  2HMN A;  2B1X A;  4NBB D;  2E76 D;  1NTM E;  1VM9 A;  4AIV A;  3D89 A;  1Q90 C;  4HM2 A;  3FOU A;  2ZT9 D;  4NBC D;  1BCC E;  1RIE A;  3CWB E;  1EG9 A;  2HMM A;  1NDO A;  3GL0 A;  2HMK A;  1O7G A;  4HKV A;  2HMO A;  1O7W A;  4QUP A;  3L71 E;  3GZX A;  2IBZ E;  1NYK A;  4H44 D;  2E75 D;  2HML A;  3N0Q A;  2BMQ A;  1EZV E;  2NVE A;  2HMJ A;  3GKE A;  1KYO E;  2XSH A;  3EN1 A;  3GL2 A;  3CXH E;  2QPZ A;  2I7F A;  3H1K E;  1O7P A;  3VMI D;  2FYU E;  1SQQ E;  4HM7 A;  1UUW A;  4HM5 A;  5KKZ C;  2DE6 D;  4QDD A;  4NB9 D;  5BOK A;  1BE3 E;  3AZC A;  5KLI C;  3H1I E;  5KLV E;  3VCP A;  3L74 E;  2JO6 A;  2YFI A;  2QJP C;  4OGQ D;  5CXM A;  1FQT A;  4P1C H;  1NTK E;  3GB4 A;  4HM0 A;  3L73 E;  3H1L E;  4HJL A;  1WQL A;  2JZA A;  4H13 D;  4NB8 D;  3L70 E;  2CKF A;  5AEU A;  1SQB E;  1PPJ E;  1O7M A;  2E4Q A;  1SQV E;  4PD4 E;  4EMJ B;  3GCE A;  1ULI A;  4NBD D;  1O7H A;  4HM4 A;  4NBA D;  2QJY C;  3GOB A;  4AAY B;  3L72 E;  4HM6 A;  4HM8 A;  2DE5 D;  4QUR A;  1P84 E;  3CX5 E;  1ULJ A;  1VCK A;  2NUK A;  4QDF B;  4NBG D;  2XSO A;  3L75 E;  2A06 E;  3EQQ A;  1L0L E;  1SQP E;  2D2C D;  4H0L D;  1JM1 A;  2NWF A;  4PV1 D;  2QJK C;  1SJG A;  3GZY A;  3VCA A;  3GTS A;  2YFL A;  4QCK A;  1G8K B;  2Q3W A;  4HM3 A;  2YFJ A;  3TGU E;  3H1H E;  3BCC E;  3VMH D;  3C0D A;  1ZRT E;  2GBX A;  1L0N E;  1NTZ E;  1G8J B;  2XR8 A;  3H1J E;  2E4P A;  4P1B H;  2BMR A;  2FYN C;  3DQY A;  4NBF D;  2NVG A;  2DE7 D;  1NU1 E;  1PP9 E;  2BMO A;  4QDF A;  3GTE A;  4QDC A;  2GBW A;  1RFS A;  4U3F E;  2NUM A;  5AEW A;  4NBH D;  2BCC E;  2ZYL A;  4HM1 A;  4NBE D;  4QUQ A;  1VF5 D;  1O7N A;  2YIU C;  2YVJ B;  1SQX E;  1UUV A;  1KB9 E;  2B24 A;  2NVF A;  3VMG D;  2E74 D; 
#chains in the Genus database with same CATH homology
 2XRX A;  5HL4 A;  2HMN A;  2B1X A;  4NBB D;  2E76 D;  1NTM E;  1VM9 A;  4AIV A;  3D89 A;  1Q90 C;  4HM2 A;  3FOU A;  2ZT9 D;  4NBC D;  1BCC E;  1RIE A;  3CWB E;  1EG9 A;  2HMM A;  1NDO A;  3GL0 A;  2HMK A;  1O7G A;  4HKV A;  2HMO A;  1O7W A;  4QUP A;  3L71 E;  3GZX A;  2IBZ E;  1NYK A;  4H44 D;  2E75 D;  2HML A;  3N0Q A;  2BMQ A;  1EZV E;  2NVE A;  2HMJ A;  3GKE A;  1KYO E;  2XSH A;  3EN1 A;  3GL2 A;  3CXH E;  2QPZ A;  2I7F A;  3H1K E;  1O7P A;  3VMI D;  2FYU E;  1SQQ E;  4HM7 A;  1UUW A;  4HM5 A;  5KKZ C;  2DE6 D;  4QDD A;  4NB9 D;  5BOK A;  1BE3 E;  3AZC A;  5KLI C;  3H1I E;  5KLV E;  3VCP A;  3L74 E;  2JO6 A;  2YFI A;  2QJP C;  4OGQ D;  5CXM A;  1FQT A;  4P1C H;  1NTK E;  3GB4 A;  4HM0 A;  3L73 E;  3H1L E;  4HJL A;  1WQL A;  2JZA A;  4H13 D;  4NB8 D;  3L70 E;  2CKF A;  5AEU A;  1SQB E;  1PPJ E;  1O7M A;  2E4Q A;  1SQV E;  4PD4 E;  4EMJ B;  3GCE A;  1ULI A;  4NBD D;  1O7H A;  4HM4 A;  4NBA D;  2QJY C;  3GOB A;  4AAY B;  3L72 E;  4HM6 A;  4HM8 A;  2DE5 D;  4QUR A;  1P84 E;  3CX5 E;  1ULJ A;  1VCK A;  2NUK A;  4QDF B;  4NBG D;  2XSO A;  3L75 E;  2A06 E;  3EQQ A;  1L0L E;  1SQP E;  2D2C D;  4H0L D;  1JM1 A;  2NWF A;  4PV1 D;  2QJK C;  1SJG A;  3GZY A;  3VCA A;  3GTS A;  2YFL A;  4QCK A;  1G8K B;  2Q3W A;  4HM3 A;  2YFJ A;  3TGU E;  3H1H E;  3BCC E;  3VMH D;  3C0D A;  1ZRT E;  2GBX A;  1L0N E;  1NTZ E;  1G8J B;  2XR8 A;  3H1J E;  2E4P A;  4P1B H;  2BMR A;  2FYN C;  3DQY A;  4NBF D;  2NVG A;  2DE7 D;  1NU1 E;  1PP9 E;  2BMO A;  4QDF A;  3GTE A;  4QDC A;  2GBW A;  1RFS A;  4U3F E;  2NUM A;  5AEW A;  4NBH D;  2BCC E;  2ZYL A;  4HM1 A;  4NBE D;  4QUQ A;  1VF5 D;  1O7N A;  2YIU C;  2YVJ B;  1SQX E;  1UUV A;  1KB9 E;  2B24 A;  2NVF A;  3VMG D;  2E74 D; 
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