4P1CH

Crystal structure of the toluene 4-monooxygenase hydroxylase-ferredoxin c7s, c84a, c85a variant electron-transfer complex
Total Genus 25

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
111
structure length
111
Chain Sequence
SFEKISSLDDIWVGEMETFETSDGTEVLIVNSEEHGVKAYQAMCPHQEILLSEGSYEGGVITCRAHLWTFNDGTGHGINPDDAALAEYPVEVKGDDIYVSTKGILPNKAHS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI3 (22-25)S3 (27-33)TI1 (8-11)TI2 (9-12)TII1 (13-16)S2 (16-21)3H1 (52-54)S9 (70-72)S4 (37-42)TI4 (33-36)S11 (88-89)S6 (50-51)O1 (48-50)S5 (44-45)TIV1 (45-48)TIV3 (64-67)S8 (61-63)S7 (56-58)TIV2 (57-60)TIV4 (65-68)TI7 (73-76)TI6 (72-75)TIV5 (78-81)TIV6 (79-82)S13 (97-100)S12 (91-94)TIV8 (93-96)TII2 (102-105)S1 (4-8)S10 (78-80)TIV7 (81-84)Updating...
connected with : NaN
molecule tags Oxidoreductase
source organism Pseudomonas mendocina
publication title Structural basis for biomolecular recognition in overlapping binding sites in a diiron enzyme system.
pubmed doi rcsb
molecule keywords Toluene-4-monooxygenase system protein A
total genus 25
structure length 111
sequence length 111
chains with identical sequence I
ec nomenclature
pdb deposition date 2014-02-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
H PF00355 Rieske Rieske [2Fe-2S] domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domain 4p1cH00
1EZVE 2CKFA 1VM9A 2XRXA 4NBCD 3TGUE 3CWBE 1VCKA 2D2CD 2NVEA 1Q90C 1UUWA 4AAYB 3GB4A 5AEWA 4QUQA 3L71E 1EG9A 1BE3E 1L0LE 1G8KB 2HMNA 2DE7D 4HM6A 3FOUA 1O7PA 1SQXE 3GL0A 3H1KE 4HM5A 2NWFA 3BCCE 4EMJB 4OGQD 2NVGA 4HKVA 2HMOA 3VMHD 4HM1A 2BMRA 3GZYA 1P84E 2ZT9D 2E76D 1O7GA 4NB9D 2BMOA 2FYNC 5CXMA 2YIUC 3C0DA 3EQQA 1O7WA 4QCKA 1SQVE 1KB9E 4QDCA 2NUMA 4QURA 1G8JB 1NTKE 2QJYC 4QDFB 1PP9E 2GBXA 2HMJA 1KYOE 3CX5E 2YFIA 1VF5D 3DQYA 4NB8D 2E4QA 1NU1E 5KKZC 2A06E 4PV1D 3GCEA 5HL4A 1JM1A 4H44D 2QPZA 2DE6D 2HMLA 2XR8A 2YFJA 2B1XA 3H1HE 3AZCA 4U3FE 4NBED 3VCAA 2Q3WA 2QJPC 1NTZE 2YFLA 1ULJA 2BCCE 3GZXA 4HM7A 5KLVE 2QJKC 1O7HA 3GKEA 3L74E 2HMMA 3L73E 3H1LE 4NBDD 3D89A 4QDFA 5AEUA 2XSOA 1WQLA 2I7FA 3L72E 1ZRTE 2NUKA 2YVJB 2JZAA 4PD4E 5BOKA 4HJLA 3GL2A 4P1CH 2JO6A 1O7NA 4NBAD 1NDOA 3GTEA 4HM2A 2GBWA 3VMGD 2XSHA 2NVFA 2E4PA 4HM4A 1SQQE 4HM0A 2E74D 1SQPE 1RFSA 4HM3A 1PPJE 4H13D 3VMID 4HM8A 3VCPA 2FYUE 1RIEA 5KLIC 2E75D 2HMKA 3L75E 4NBHD 3CXHE 1L0NE 4P1BH 1ULIA 4QDDA 1NYKA 3H1IE 1SQBE 4H0LD 2BMQA 4NBGD 1NTME 2ZYLA 3N0QA 4AIVA 4NBFD 2DE5D 3EN1A 1BCCE 2B24A 2IBZE 1SJGA 3GOBA 3H1JE 1FQTA 1O7MA 4QUPA 1UUVA 3GTSA 3L70E 4NBBD
chains in the Genus database with same CATH superfamily
1EZVE 2CKFA 1VM9A 2XRXA 4NBCD 3TGUE 3CWBE 1VCKA 2D2CD 2NVEA 1Q90C 1UUWA 4AAYB 3GB4A 5AEWA 4QUQA 3L71E 1EG9A 1BE3E 1L0LE 1G8KB 2HMNA 2DE7D 4HM6A 3FOUA 1O7PA 1SQXE 3GL0A 3H1KE 4HM5A 2NWFA 3BCCE 4EMJB 4OGQD 2NVGA 4HKVA 2HMOA 3VMHD 4HM1A 2BMRA 3GZYA 1P84E 2ZT9D 2E76D 1O7GA 4NB9D 2BMOA 2FYNC 5CXMA 2YIUC 3C0DA 3EQQA 1O7WA 4QCKA 1SQVE 1KB9E 4QDCA 2NUMA 4QURA 1G8JB 1NTKE 2QJYC 4QDFB 1PP9E 2GBXA 2HMJA 1KYOE 3CX5E 2YFIA 1VF5D 3DQYA 4NB8D 2E4QA 1NU1E 5KKZC 2A06E 4PV1D 3GCEA 5HL4A 1JM1A 4H44D 2QPZA 2DE6D 2HMLA 2XR8A 2YFJA 2B1XA 3H1HE 3AZCA 4U3FE 4NBED 3VCAA 2Q3WA 2QJPC 1NTZE 2YFLA 1ULJA 2BCCE 3GZXA 4HM7A 5KLVE 2QJKC 1O7HA 3GKEA 3L74E 2HMMA 3L73E 3H1LE 4NBDD 3D89A 4QDFA 5AEUA 2XSOA 1WQLA 2I7FA 3L72E 1ZRTE 2NUKA 2YVJB 2JZAA 4PD4E 5BOKA 4HJLA 3GL2A 4P1CH 2JO6A 1O7NA 4NBAD 1NDOA 3GTEA 4HM2A 2GBWA 3VMGD 2XSHA 2NVFA 2E4PA 4HM4A 1SQQE 4HM0A 2E74D 1SQPE 1RFSA 4HM3A 1PPJE 4H13D 3VMID 4HM8A 3VCPA 2FYUE 1RIEA 5KLIC 2E75D 2HMKA 3L75E 4NBHD 3CXHE 1L0NE 4P1BH 1ULIA 4QDDA 1NYKA 3H1IE 1SQBE 4H0LD 2BMQA 4NBGD 1NTME 2ZYLA 3N0QA 4AIVA 4NBFD 2DE5D 3EN1A 1BCCE 2B24A 2IBZE 1SJGA 3GOBA 3H1JE 1FQTA 1O7MA 4QUPA 1UUVA 3GTSA 3L70E 4NBBD
chains in the Genus database with same CATH topology
1EZVE 2CKFA 1VM9A 2XRXA 4NBCD 3TGUE 3CWBE 1VCKA 2D2CD 2NVEA 1Q90C 1UUWA 4AAYB 3GB4A 5AEWA 4QUQA 3L71E 1EG9A 1BE3E 1L0LE 1G8KB 2HMNA 2DE7D 4HM6A 3FOUA 1O7PA 1SQXE 3GL0A 3H1KE 4HM5A 2NWFA 3BCCE 4EMJB 4OGQD 2NVGA 4HKVA 2HMOA 3VMHD 4HM1A 2BMRA 3GZYA 1P84E 2ZT9D 2E76D 1O7GA 4NB9D 2BMOA 2FYNC 5CXMA 2YIUC 3C0DA 3EQQA 1O7WA 4QCKA 1SQVE 1KB9E 4QDCA 2NUMA 4QURA 1G8JB 1NTKE 2QJYC 4QDFB 1PP9E 2GBXA 2HMJA 1KYOE 3CX5E 2YFIA 1VF5D 3DQYA 4NB8D 2E4QA 1NU1E 5KKZC 2A06E 4PV1D 3GCEA 5HL4A 1JM1A 4H44D 2QPZA 2DE6D 2HMLA 2XR8A 2YFJA 2B1XA 3H1HE 3AZCA 4U3FE 4NBED 3VCAA 2Q3WA 2QJPC 1NTZE 2YFLA 1ULJA 2BCCE 3GZXA 4HM7A 5KLVE 2QJKC 1O7HA 3GKEA 3L74E 2HMMA 3L73E 3H1LE 4NBDD 3D89A 4QDFA 5AEUA 2XSOA 1WQLA 2I7FA 3L72E 1ZRTE 2NUKA 2YVJB 2JZAA 4PD4E 5BOKA 4HJLA 3GL2A 4P1CH 2JO6A 1O7NA 4NBAD 1NDOA 3GTEA 4HM2A 2GBWA 3VMGD 2XSHA 2NVFA 2E4PA 4HM4A 1SQQE 4HM0A 2E74D 1SQPE 1RFSA 4HM3A 1PPJE 4H13D 3VMID 4HM8A 3VCPA 2FYUE 1RIEA 5KLIC 2E75D 2HMKA 3L75E 4NBHD 3CXHE 1L0NE 4P1BH 1ULIA 4QDDA 1NYKA 3H1IE 1SQBE 4H0LD 2BMQA 4NBGD 1NTME 2ZYLA 3N0QA 4AIVA 4NBFD 2DE5D 3EN1A 1BCCE 2B24A 2IBZE 1SJGA 3GOBA 3H1JE 1FQTA 1O7MA 4QUPA 1UUVA 3GTSA 3L70E 4NBBD
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1EZV E;  2CKF A;  1VM9 A;  2XRX A;  4NBC D;  3TGU E;  3CWB E;  1VCK A;  2D2C D;  2NVE A;  1Q90 C;  1UUW A;  4AAY B;  3GB4 A;  5AEW A;  4QUQ A;  3L71 E;  1EG9 A;  1BE3 E;  1L0L E;  1G8K B;  2HMN A;  2DE7 D;  4HM6 A;  3FOU A;  1O7P A;  1SQX E;  3GL0 A;  3H1K E;  4HM5 A;  2NWF A;  3BCC E;  4EMJ B;  4OGQ D;  2NVG A;  4HKV A;  2HMO A;  3VMH D;  4HM1 A;  2BMR A;  3GZY A;  1P84 E;  2ZT9 D;  2E76 D;  1O7G A;  4NB9 D;  2BMO A;  2FYN C;  5CXM A;  2YIU C;  3C0D A;  3EQQ A;  1O7W A;  4QCK A;  1SQV E;  1KB9 E;  4QDC A;  2NUM A;  4QUR A;  1G8J B;  1NTK E;  2QJY C;  4QDF B;  1PP9 E;  2GBX A;  2HMJ A;  1KYO E;  3CX5 E;  2YFI A;  1VF5 D;  3DQY A;  4NB8 D;  2E4Q A;  1NU1 E;  5KKZ C;  2A06 E;  4PV1 D;  3GCE A;  5HL4 A;  1JM1 A;  4H44 D;  2QPZ A;  2DE6 D;  2HML A;  2XR8 A;  2YFJ A;  2B1X A;  3H1H E;  3AZC A;  4U3F E;  4NBE D;  3VCA A;  2Q3W A;  2QJP C;  1NTZ E;  2YFL A;  1ULJ A;  2BCC E;  3GZX A;  4HM7 A;  5KLV E;  2QJK C;  1O7H A;  3GKE A;  3L74 E;  2HMM A;  3L73 E;  3H1L E;  4NBD D;  3D89 A;  4QDF A;  5AEU A;  2XSO A;  1WQL A;  2I7F A;  3L72 E;  1ZRT E;  2NUK A;  2YVJ B;  2JZA A;  4PD4 E;  5BOK A;  4HJL A;  3GL2 A;  4P1C H;  2JO6 A;  1O7N A;  4NBA D;  1NDO A;  3GTE A;  4HM2 A;  2GBW A;  3VMG D;  2XSH A;  2NVF A;  2E4P A;  4HM4 A;  1SQQ E;  4HM0 A;  2E74 D;  1SQP E;  1RFS A;  4HM3 A;  1PPJ E;  4H13 D;  3VMI D;  4HM8 A;  3VCP A;  2FYU E;  1RIE A;  5KLI C;  2E75 D;  2HMK A;  3L75 E;  4NBH D;  3CXH E;  1L0N E;  4P1B H;  1ULI A;  4QDD A;  1NYK A;  3H1I E;  1SQB E;  4H0L D;  2BMQ A;  4NBG D;  1NTM E;  2ZYL A;  3N0Q A;  4AIV A;  4NBF D;  2DE5 D;  3EN1 A;  1BCC E;  2B24 A;  2IBZ E;  1SJG A;  3GOB A;  3H1J E;  1FQT A;  1O7M A;  4QUP A;  1UUV A;  3GTS A;  3L70 E;  4NBB D; 
#chains in the Genus database with same CATH topology
 1EZV E;  2CKF A;  1VM9 A;  2XRX A;  4NBC D;  3TGU E;  3CWB E;  1VCK A;  2D2C D;  2NVE A;  1Q90 C;  1UUW A;  4AAY B;  3GB4 A;  5AEW A;  4QUQ A;  3L71 E;  1EG9 A;  1BE3 E;  1L0L E;  1G8K B;  2HMN A;  2DE7 D;  4HM6 A;  3FOU A;  1O7P A;  1SQX E;  3GL0 A;  3H1K E;  4HM5 A;  2NWF A;  3BCC E;  4EMJ B;  4OGQ D;  2NVG A;  4HKV A;  2HMO A;  3VMH D;  4HM1 A;  2BMR A;  3GZY A;  1P84 E;  2ZT9 D;  2E76 D;  1O7G A;  4NB9 D;  2BMO A;  2FYN C;  5CXM A;  2YIU C;  3C0D A;  3EQQ A;  1O7W A;  4QCK A;  1SQV E;  1KB9 E;  4QDC A;  2NUM A;  4QUR A;  1G8J B;  1NTK E;  2QJY C;  4QDF B;  1PP9 E;  2GBX A;  2HMJ A;  1KYO E;  3CX5 E;  2YFI A;  1VF5 D;  3DQY A;  4NB8 D;  2E4Q A;  1NU1 E;  5KKZ C;  2A06 E;  4PV1 D;  3GCE A;  5HL4 A;  1JM1 A;  4H44 D;  2QPZ A;  2DE6 D;  2HML A;  2XR8 A;  2YFJ A;  2B1X A;  3H1H E;  3AZC A;  4U3F E;  4NBE D;  3VCA A;  2Q3W A;  2QJP C;  1NTZ E;  2YFL A;  1ULJ A;  2BCC E;  3GZX A;  4HM7 A;  5KLV E;  2QJK C;  1O7H A;  3GKE A;  3L74 E;  2HMM A;  3L73 E;  3H1L E;  4NBD D;  3D89 A;  4QDF A;  5AEU A;  2XSO A;  1WQL A;  2I7F A;  3L72 E;  1ZRT E;  2NUK A;  2YVJ B;  2JZA A;  4PD4 E;  5BOK A;  4HJL A;  3GL2 A;  4P1C H;  2JO6 A;  1O7N A;  4NBA D;  1NDO A;  3GTE A;  4HM2 A;  2GBW A;  3VMG D;  2XSH A;  2NVF A;  2E4P A;  4HM4 A;  1SQQ E;  4HM0 A;  2E74 D;  1SQP E;  1RFS A;  4HM3 A;  1PPJ E;  4H13 D;  3VMI D;  4HM8 A;  3VCP A;  2FYU E;  1RIE A;  5KLI C;  2E75 D;  2HMK A;  3L75 E;  4NBH D;  3CXH E;  1L0N E;  4P1B H;  1ULI A;  4QDD A;  1NYK A;  3H1I E;  1SQB E;  4H0L D;  2BMQ A;  4NBG D;  1NTM E;  2ZYL A;  3N0Q A;  4AIV A;  4NBF D;  2DE5 D;  3EN1 A;  1BCC E;  2B24 A;  2IBZ E;  1SJG A;  3GOB A;  3H1J E;  1FQT A;  1O7M A;  4QUP A;  1UUV A;  3GTS A;  3L70 E;  4NBB D; 
#chains in the Genus database with same CATH homology
 1EZV E;  2CKF A;  1VM9 A;  2XRX A;  4NBC D;  3TGU E;  3CWB E;  1VCK A;  2D2C D;  2NVE A;  1Q90 C;  1UUW A;  4AAY B;  3GB4 A;  5AEW A;  4QUQ A;  3L71 E;  1EG9 A;  1BE3 E;  1L0L E;  1G8K B;  2HMN A;  2DE7 D;  4HM6 A;  3FOU A;  1O7P A;  1SQX E;  3GL0 A;  3H1K E;  4HM5 A;  2NWF A;  3BCC E;  4EMJ B;  4OGQ D;  2NVG A;  4HKV A;  2HMO A;  3VMH D;  4HM1 A;  2BMR A;  3GZY A;  1P84 E;  2ZT9 D;  2E76 D;  1O7G A;  4NB9 D;  2BMO A;  2FYN C;  5CXM A;  2YIU C;  3C0D A;  3EQQ A;  1O7W A;  4QCK A;  1SQV E;  1KB9 E;  4QDC A;  2NUM A;  4QUR A;  1G8J B;  1NTK E;  2QJY C;  4QDF B;  1PP9 E;  2GBX A;  2HMJ A;  1KYO E;  3CX5 E;  2YFI A;  1VF5 D;  3DQY A;  4NB8 D;  2E4Q A;  1NU1 E;  5KKZ C;  2A06 E;  4PV1 D;  3GCE A;  5HL4 A;  1JM1 A;  4H44 D;  2QPZ A;  2DE6 D;  2HML A;  2XR8 A;  2YFJ A;  2B1X A;  3H1H E;  3AZC A;  4U3F E;  4NBE D;  3VCA A;  2Q3W A;  2QJP C;  1NTZ E;  2YFL A;  1ULJ A;  2BCC E;  3GZX A;  4HM7 A;  5KLV E;  2QJK C;  1O7H A;  3GKE A;  3L74 E;  2HMM A;  3L73 E;  3H1L E;  4NBD D;  3D89 A;  4QDF A;  5AEU A;  2XSO A;  1WQL A;  2I7F A;  3L72 E;  1ZRT E;  2NUK A;  2YVJ B;  2JZA A;  4PD4 E;  5BOK A;  4HJL A;  3GL2 A;  4P1C H;  2JO6 A;  1O7N A;  4NBA D;  1NDO A;  3GTE A;  4HM2 A;  2GBW A;  3VMG D;  2XSH A;  2NVF A;  2E4P A;  4HM4 A;  1SQQ E;  4HM0 A;  2E74 D;  1SQP E;  1RFS A;  4HM3 A;  1PPJ E;  4H13 D;  3VMI D;  4HM8 A;  3VCP A;  2FYU E;  1RIE A;  5KLI C;  2E75 D;  2HMK A;  3L75 E;  4NBH D;  3CXH E;  1L0N E;  4P1B H;  1ULI A;  4QDD A;  1NYK A;  3H1I E;  1SQB E;  4H0L D;  2BMQ A;  4NBG D;  1NTM E;  2ZYL A;  3N0Q A;  4AIV A;  4NBF D;  2DE5 D;  3EN1 A;  1BCC E;  2B24 A;  2IBZ E;  1SJG A;  3GOB A;  3H1J E;  1FQT A;  1O7M A;  4QUP A;  1UUV A;  3GTS A;  3L70 E;  4NBB D; 
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