4U9LA

Structure of a membrane protein
Total Genus 70
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
70
sequence length
179
structure length
179
Chain Sequence
LVYSEAGPVALWLARVRWLVILILTGMVTSSILQGFESVLEAVTALAFYVPVLLGTGGNTGNQSATLIIRALATRDLDLRDWRRVFLKEMGVGLLLGLTLSFLLVGKVYWDGHPLLLPVVGVSLVLIVFFANLVGAMLPFLLRRLGVDPALVSNPLVATLSDVTGLLIYLSVARLLLEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal transport
molecule keywords Magnesium transporter MgtE
publication title Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
pubmed doi rcsb
source organism Thermus thermophilus hb8
total genus 70
structure length 179
sequence length 179
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-08-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01769 MgtE Divalent cation transporter
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.357.20 Mainly Alpha Orthogonal Bundle Tetracycline Repressor; domain 2 SLC41 divalent cation transporters, integral membrane domain 4u9lA00
2ZY9A 2YVXA 4U9NA 4WIBA 4U9LA
chains in the Genus database with same CATH superfamily
3LJLA 2UXOA 3QBMA 2ZOYA 5F04A 2QIBA 3BNIA 5D18A 5FKNA 4D7NA 2YVXA 4MK6A 3Q0WA 4D7MA 3TP3A 2G0EA 5F0HA 2PBXA 3DPJA 2G7GA 2QOPA 5K7HA 3BJBA 3SFIA 5EFYA 2GENA 2UXUA 2R7RA 4GCTA 4D5FA 2NP5A 3G7RA 2RAEA 4I76A 3DU6A 2RHAA 3NXCA 3EUPA 4HKUA 3LWJA 3NI7A 5EZGA 2XGDA 3VW1A 5GPCA 2FD5A 1ZKGA 3VW2A 3S5RA 3MNLA 2PZ9A 4GCLA 2Y30A 3EGQA 2VKVA 3PPBA 3BT9A 3BRUA 3PASA 5FKKA 3ON2A 1Z77A 3QKXA 1JTXA 3BTCA 4W1UA 3P9TA 1QVTA 2GUHA 2FJ1A 4U9NA 2HXIA 2NP3A 3DU5A 3SDGA 3TP0A 3HIMA 5FKOA 3QQAA 4V2GA 3ZQIA 2JK3A 2ZCMA 1RPWA 1JT0A 5HBUA 2FBQA 2OF7A 4JKZA 3ANPA 2GFNA 3PM1A 2VKEA 3HGGA 2ZY9A 3G1MA 3V6GA 4OD5A 3VTIA 2ZCNA 4JL3A 2TCTA 4ACIA 3G56A 3B6AA 3VP5A 3E7QA 3T6NA 4D5CA 5GP9A 5D19A 2HYJA 2XRLA 3ZQHA 5FKMA 5HAWA 3F0CA 3G1LA 5FHPA 3BQZA 3BTJA 3BQYA 3IH2A 1RKWA 4L62A 3BR3A 3BR6A 3FHNA 2IAIA 3LHQA 2QWTA 3HTHA 3IH4A 4AC6A 3O8GA 4M3FA 3IUVA 2QKOA 1JT6A 5F1JA 2IEKA 3NS4A 2XPWA 5K7ZA 2XGCA 2PFVA 4M3EA 3V78A 3B6CA 4W97A 2R7XA 1VI0A 5C4YA 3C2BA 3Q0UA 2OPTA 3FIWA 5K7FA 2UXHA 3KKDA 2DG7A 3C07A 3VOXA 3ZQFA 2QCOA 5D1RA 3LSRA 3GEUA 4AUXA 4YZEA 5FGLA 2FJI1 2RASA 3BR0A 3DCFA 4M3GA 3FK6A 2Q24A 4MXMA 3KZ9A 3HTJA 4JYKA 2Y2ZA 4CGRA 3WHBA 2EH3A 2FX0A 3CDLA 3VVZA 2G7LA 3G1OA 5AQCA 3VIBA 2XGEA 3CRJA 4U9LA 2XB5A 4DW6A 2X6OA 2HKUA 5CXGA 2D6YA 4JNNA 3CJDA 3KNWA 1U9OA 3FRQA 5F08A 5F0FA 3LSPA 5F0CA 5IP6A 3IH3A 3AQSA 3O60A 5H9TA 4I6ZA 2I10A 2DG8A 2TRTA 3VVYA 1UI5A 5DAJA 5IOYA 5FMPA 3QPSA 2IU5A 5J1YA 2W53A 3VOKA 2UXIA 5FKLA 2ID3A 3B81A 3QPLA 5K58A 2GBYA 4G12A 3COLA 2XDNA 2XPUA 3CWRA 1RKTA 3BTIA 3F1BA 4KWAA 2QTQA 2NX4A 3LOCA 5F27A 3RD3A 3RH2A 4OD4A 3BR1A 3VW0A 3GZIA 5IPAA 5J3LA 3O8HA 2R7WA 2R7UA 2JJ7A 3WHCA 3KYLA 4AC0A 2R7TA 2G3BA 2R7VA 2UXPA 4GFLA 3NNRA 4ME9A 2V57A 3HE0A 1BJZA 5CXIA 3CCYA 3FK7A 3MVPA 3BCGA 2YVEA 1UI6A 5CQGA 5IOZA 4GFKA 2O7OA 2WUIA 3BR5A 1T33A 2ID6A 2F07A 2R7QA 1ORKA 4AF5A 2Y31A 5GPAA 2IBDA 5HSZA 3HTAA 2B1EA 3NRGA 3ANGA 3Q0VA 3BTLA 4M3DA 4WIBA 4NELA 1QPIA 3KKCA 4V2FA 5J1UA 2OERA 5EZHA 2ZCXA 2R7OA 3HTIA 3BR2A 4UDSA 4XK4A 3JSJA 2NS8A 2G7SA 4X1EA 3VPRA 4GCKA 1U9NA 3K8PC 3HGYA 4ICHA 4PXIA 3SWHA 2X9DA 2R7SA 2WGBA 2ZB9A 2REKA 2B3WA 3LSJA 2OI8A 5EYRA 1ZK8A 3VUQA 4IRVA 4C2MA 1JUSA 4MO7A 3ON4A 4ABZA 3ZQLA 3VVXA 2HYTA 3AQTA 2HQ5A 4NN1A 4M3BA 3BHQA 3Q3SA 1Z0XA 2NS7A 3DEWA 3NPIA 2FQ4A 4DVYP 2WV1A 3ZQGA 2VPRA 1JUPA 5CW8A 5J1RA 1QVUA 4B3AA 4B1RA 2YVHA 2ZOZA 1SGMA 2A2FX 1T56A 2XPVA 1JTYA 1A6IA 2HXOA 1JUMA 2O7TA 2DTZA
chains in the Genus database with same CATH topology
2ZY9A 2YVXA 4U9NA 4WIBA 4U9LA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ZY9 A;  2YVX A;  4U9N A;  4WIB A;  4U9L A; 
#chains in the Genus database with same CATH topology
 3LJL A;  2UXO A;  3QBM A;  2ZOY A;  5F04 A;  2QIB A;  3BNI A;  5D18 A;  5FKN A;  4D7N A;  2YVX A;  4MK6 A;  3Q0W A;  4D7M A;  3TP3 A;  2G0E A;  5F0H A;  2PBX A;  3DPJ A;  2G7G A;  2QOP A;  5K7H A;  3BJB A;  3SFI A;  5EFY A;  2GEN A;  2UXU A;  2R7R A;  4GCT A;  4D5F A;  2NP5 A;  3G7R A;  2RAE A;  4I76 A;  3DU6 A;  2RHA A;  3NXC A;  3EUP A;  4HKU A;  3LWJ A;  3NI7 A;  5EZG A;  2XGD A;  3VW1 A;  5GPC A;  2FD5 A;  1ZKG A;  3VW2 A;  3S5R A;  3MNL A;  2PZ9 A;  4GCL A;  2Y30 A;  3EGQ A;  2VKV A;  3PPB A;  3BT9 A;  3BRU A;  3PAS A;  5FKK A;  3ON2 A;  1Z77 A;  3QKX A;  1JTX A;  3BTC A;  4W1U A;  3P9T A;  1QVT A;  2GUH A;  2FJ1 A;  4U9N A;  2HXI A;  2NP3 A;  3DU5 A;  3SDG A;  3TP0 A;  3HIM A;  5FKO A;  3QQA A;  4V2G A;  3ZQI A;  2JK3 A;  2ZCM A;  1RPW A;  1JT0 A;  5HBU A;  2FBQ A;  2OF7 A;  4JKZ A;  3ANP A;  2GFN A;  3PM1 A;  2VKE A;  3HGG A;  2ZY9 A;  3G1M A;  3V6G A;  4OD5 A;  3VTI A;  2ZCN A;  4JL3 A;  2TCT A;  4ACI A;  3G56 A;  3B6A A;  3VP5 A;  3E7Q A;  3T6N A;  4D5C A;  5GP9 A;  5D19 A;  2HYJ A;  2XRL A;  3ZQH A;  5FKM A;  5HAW A;  3F0C A;  3G1L A;  5FHP A;  3BQZ A;  3BTJ A;  3BQY A;  3IH2 A;  1RKW A;  4L62 A;  3BR3 A;  3BR6 A;  3FHN A;  2IAI A;  3LHQ A;  2QWT A;  3HTH A;  3IH4 A;  4AC6 A;  3O8G A;  4M3F A;  3IUV A;  2QKO A;  1JT6 A;  5F1J A;  2IEK A;  3NS4 A;  2XPW A;  5K7Z A;  2XGC A;  2PFV A;  4M3E A;  3V78 A;  3B6C A;  4W97 A;  2R7X A;  1VI0 A;  5C4Y A;  3C2B A;  3Q0U A;  2OPT A;  3FIW A;  5K7F A;  2UXH A;  3KKD A;  2DG7 A;  3C07 A;  3VOX A;  3ZQF A;  2QCO A;  5D1R A;  3LSR A;  3GEU A;  4AUX A;  4YZE A;  5FGL A;  2FJI 1;  2RAS A;  3BR0 A;  3DCF A;  4M3G A;  3FK6 A;  2Q24 A;  4MXM A;  3KZ9 A;  3HTJ A;  4JYK A;  2Y2Z A;  4CGR A;  3WHB A;  2EH3 A;  2FX0 A;  3CDL A;  3VVZ A;  2G7L A;  3G1O A;  5AQC A;  3VIB A;  2XGE A;  3CRJ A;  4U9L A;  2XB5 A;  4DW6 A;  2X6O A;  2HKU A;  5CXG A;  2D6Y A;  4JNN A;  3CJD A;  3KNW A;  1U9O A;  3FRQ A;  5F08 A;  5F0F A;  3LSP A;  5F0C A;  5IP6 A;  3IH3 A;  3AQS A;  3O60 A;  5H9T A;  4I6Z A;  2I10 A;  2DG8 A;  2TRT A;  3VVY A;  1UI5 A;  5DAJ A;  5IOY A;  5FMP A;  3QPS A;  2IU5 A;  5J1Y A;  2W53 A;  3VOK A;  2UXI A;  5FKL A;  2ID3 A;  3B81 A;  3QPL A;  5K58 A;  2GBY A;  4G12 A;  3COL A;  2XDN A;  2XPU A;  3CWR A;  1RKT A;  3BTI A;  3F1B A;  4KWA A;  2QTQ A;  2NX4 A;  3LOC A;  5F27 A;  3RD3 A;  3RH2 A;  4OD4 A;  3BR1 A;  3VW0 A;  3GZI A;  5IPA A;  5J3L A;  3O8H A;  2R7W A;  2R7U A;  2JJ7 A;  3WHC A;  3KYL A;  4AC0 A;  2R7T A;  2G3B A;  2R7V A;  2UXP A;  4GFL A;  3NNR A;  4ME9 A;  2V57 A;  3HE0 A;  1BJZ A;  5CXI A;  3CCY A;  3FK7 A;  3MVP A;  3BCG A;  2YVE A;  1UI6 A;  5CQG A;  5IOZ A;  4GFK A;  2O7O A;  2WUI A;  3BR5 A;  1T33 A;  2ID6 A;  2F07 A;  2R7Q A;  1ORK A;  4AF5 A;  2Y31 A;  5GPA A;  2IBD A;  5HSZ A;  3HTA A;  2B1E A;  3NRG A;  3ANG A;  3Q0V A;  3BTL A;  4M3D A;  4WIB A;  4NEL A;  1QPI A;  3KKC A;  4V2F A;  5J1U A;  2OER A;  5EZH A;  2ZCX A;  2R7O A;  3HTI A;  3BR2 A;  4UDS A;  4XK4 A;  3JSJ A;  2NS8 A;  2G7S A;  4X1E A;  3VPR A;  4GCK A;  1U9N A;  3K8P C;  3HGY A;  4ICH A;  4PXI A;  3SWH A;  2X9D A;  2R7S A;  2WGB A;  2ZB9 A;  2REK A;  2B3W A;  3LSJ A;  2OI8 A;  5EYR A;  1ZK8 A;  3VUQ A;  4IRV A;  4C2M A;  1JUS A;  4MO7 A;  3ON4 A;  4ABZ A;  3ZQL A;  3VVX A;  2HYT A;  3AQT A;  2HQ5 A;  4NN1 A;  4M3B A;  3BHQ A;  3Q3S A;  1Z0X A;  2NS7 A;  3DEW A;  3NPI A;  2FQ4 A;  4DVY P;  2WV1 A;  3ZQG A;  2VPR A;  1JUP A;  5CW8 A;  5J1R A;  1QVU A;  4B3A A;  4B1R A;  2YVH A;  2ZOZ A;  1SGM A;  2A2F X;  1T56 A;  2XPV A;  1JTY A;  1A6I A;  2HXO A;  1JUM A;  2O7T A;  2DTZ A; 
#chains in the Genus database with same CATH homology
 2ZY9 A;  2YVX A;  4U9N A;  4WIB A;  4U9L A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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