1HO5A

5'-nucleotidase (e. coli) in complex with adenosine and phosphate
Total Genus 168
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
168
sequence length
525
structure length
525
Chain Sequence
YEQDKTYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEFRKPADEAKLVIQELQQTEKPDIIIAATHMGHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQDPVCMAAENKKQVDYVPGTPCKPDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAAQMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAVAQMKPDSGAYPQFANVSFVAKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Escherichia coli
publication title Mechanism of hydrolysis of phosphate esters by the dimetal center of 5'-nucleotidase based on crystal structures.
pubmed doi rcsb
molecule keywords 5'-NUCLEOTIDASE
total genus 168
structure length 525
sequence length 525
chains with identical sequence B
ec nomenclature ec 3.1.3.5: 5'-nucleotidase.
pdb deposition date 2000-12-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 1ho5A01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 1ho5A02
2USHA 3LL8A 3QFOA 2Z06A 3QFNA 2DFJA 5B8IA 4M0VA 4ORAA 3V4YA 3H61A 1HO5A 4FBKA 3ZU0A 4TUGA 2NPPC 4FBWA 2R17A 3RL5A 5EQVA 2NYMC 3H60A 2BDXA 4ORCA 1Z2WA 4DT2A 2IE3C 4O4KA 1U32A 2QFRA 4TUIA 3C5WC 4B2OA 2QFPA 2BCDA 3DSCA 1HP1A 1TCOA 2HYOA 2JOGA 2O8GA 3T1IA 4UT2A 3H62B 4KKZA 5JPFA 3CK2A 2QJCA 2IE4C 1S3NA 4KBPA 4UT3B 4YKEA 4O24A 4H1SA 4WWLA 4UT3A 3FGAC 1JK7A 1S70A 2Z72A 5C1VA 3DW8C 3RQZA 3JYFA 4H2GA 3RL4A 3TGHA 4MP0A 4XPNA 1S3MA 4DHLA 4ZX2A 3KBPA 2KKNA 3N5UA 4MOVA 3HVQA 3ZTVA 1QHWA 3IVEA 2HYPA 1MF8A 1S95A 4J6OA 2CV9A 5DNYA 1AUIA 3E7AA 3AUZA 3K7WC 1S3LA 4F0ZA 2WDEA 4V0XA 1S8EA 2Q8UA 3RL3A 5HPEA 1USHA 1OI8A 4LACC 3QFMA 3EGHA 3H68A 1IT6A 3E7BA 4IL1A 3K7VC 4LU9A 1HPUA 1WARA 4JA9A 2HY1A 3THNA 4ORBA 2GJUA 5GTUA 2YVTA 1SU1A 5F3WA 2A22A 3H67A 1QFCA 1M63A 3IVDA 1T70A 4IYPC 2NXFA 1KBPA 4Q7FA 5IOHA 2WDDA 4OR9A 3H66A 5J28A 2NYLC 3P71C 3PSNA 4LTYA 1T71A 4H2IA 4H2BA 1XZWA 4JA7A 4I5LC 1W24A 5JPEA 3H63A 2AHDA 1OIDA 3PSOA 3QFKA 4V0WA 1Z2XA 3AV0A 4HD0A 5INBA 1XM7A 3EGGA 2WDCA 3QG5C 4FCXA 4H1YP 2O8AA 4NZVA 4UWQA 1II7A 2XMOA 3IB8A 4FBQA 2IAEC 4V0VA 1NNWA 1V73A 4H2FA 3GVEA 2P6BA 2ZBMA 3DSDA 1G5BA 1UF3A 2WDFA 4G9JA 4DSYA 3THOB 1OIEA 4MOYA 3ICFA 2Z1AA 4O5GA 5JJTA 1WAO1 2BQ8X 1UTEA 4ZVZA 3C9FA 4I5NC 1FJMA 3H69A 3H64A 4O43A 3IB7A
chains in the Genus database with same CATH superfamily
2USHA 3LL8A 3QFOA 2Z06A 3QFNA 2DFJA 5B8IA 4M0VA 4ORAA 3V4YA 3H61A 1HO5A 4FBKA 3ZU0A 4TUGA 2NPPC 4FBWA 2R17A 3RL5A 5EQVA 2NYMC 3H60A 2BDXA 4ORCA 1Z2WA 4DT2A 2DXNA 2IE3C 4O4KA 1U32A 2QFRA 2ZOAA 3C5WC 4TUIA 4B2OA 2QFPA 2BCDA 3DSCA 1HP1A 1TCOA 2HYOA 2JOGA 2O8GA 3T1IA 4UT2A 3H62B 4KKZA 5JPFA 3CK2A 2QJCA 2IE4C 1S3NA 4KBPA 4UT3B 4YKEA 4O24A 4H1SA 4WWLA 4UT3A 3FGAC 1JK7A 1S70A 2Z72A 5C1VA 2ZO9B 3DW8C 3RQZA 3JYFA 4H2GA 3RL4A 3TGHA 4MP0A 4XPNA 1S3MA 4DHLA 4ZX2A 3KBPA 2KKNA 3N5UA 4MOVA 3E0JA 3HVQA 1QHWA 3IVEA 3ZTVA 2HYPA 1MF8A 1S95A 4J6OA 2CV9A 5DNYA 1AUIA 3E7AA 3AUZA 3K7WC 1S3LA 4F0ZA 2WDEA 4V0XA 1S8EA 2Q8UA 3RL3A 5HPEA 1USHA 3D03A 1OI8A 4LACC 3QFMA 3EGHA 3H68A 1IT6A 3E7BA 4IL1A 3K7VC 4LU9A 1HPUA 1WARA 4JA9A 2HY1A 3THNA 4ORBA 2GJUA 5GTUA 2YVTA 1SU1A 5F3WA 2A22A 3H67A 1QFCA 1M63A 3IVDA 1T70A 4IYPC 2NXFA 1KBPA 4Q7FA 5IOHA 2WDDA 4OR9A 3H66A 5J28A 2NYLC 3P71C 3PSNA 4LTYA 1T71A 4H2IA 4H2BA 1XZWA 4JA7A 4I5LC 1W24A 5JPEA 3H63A 2AHDA 1OIDA 2DXLA 3PSOA 3QFKA 4V0WA 1Z2XA 3AV0A 4HD0A 5INBA 1XM7A 3EGGA 2WDCA 3QG5C 4FCXA 4H1YP 2O8AA 4NZVA 4UWQA 1II7A 2XMOA 3IB8A 4FBQA 2IAEC 4V0VA 1NNWA 1V73A 4H2FA 3GVEA 2P6BA 2ZBMA 3DSDA 1G5BA 1UF3A 2WDFA 4G9JA 4DSYA 3THOB 1OIEA 4MOYA 3ICFA 2Z1AA 2YEQA 4O5GA 5JJTA 1WAO1 3FLOA 2BQ8X 1UTEA 4ZVZA 3C9FA 4I5NC 1FJMA 3H69A 3H64A 4O43A 3IB7A
chains in the Genus database with same CATH topology
2USHA 3LL8A 3QFOA 2Z06A 3QFNA 2DFJA 5B8IA 4M0VA 4ORAA 3V4YA 3H61A 1HO5A 4FBKA 3ZU0A 4TUGA 2NPPC 4FBWA 2R17A 3RL5A 5EQVA 2NYMC 3H60A 2BDXA 4ORCA 1Z2WA 4DT2A 2DXNA 2IE3C 4O4KA 1U32A 2QFRA 2ZOAA 3C5WC 4TUIA 4B2OA 2QFPA 2BCDA 3DSCA 1HP1A 1TCOA 2HYOA 2JOGA 2O8GA 3T1IA 4UT2A 3H62B 4KKZA 5JPFA 3CK2A 2QJCA 2IE4C 1S3NA 4KBPA 4UT3B 4YKEA 4O24A 4H1SA 4WWLA 4UT3A 3FGAC 1JK7A 1S70A 2Z72A 5C1VA 2ZO9B 3DW8C 3RQZA 3JYFA 4H2GA 3RL4A 3TGHA 4MP0A 4XPNA 1S3MA 4DHLA 4ZX2A 3KBPA 2KKNA 3N5UA 4MOVA 3E0JA 3HVQA 1QHWA 3IVEA 3ZTVA 2HYPA 1MF8A 1S95A 4J6OA 2CV9A 5DNYA 1AUIA 3E7AA 3AUZA 3K7WC 1S3LA 4F0ZA 2WDEA 4V0XA 1S8EA 2Q8UA 3RL3A 5HPEA 1USHA 3D03A 1OI8A 4LACC 3QFMA 3EGHA 3H68A 1IT6A 3E7BA 4IL1A 3K7VC 4LU9A 1HPUA 1WARA 4JA9A 2HY1A 3THNA 4ORBA 2GJUA 5GTUA 2YVTA 1SU1A 5F3WA 2A22A 3H67A 1QFCA 1M63A 3IVDA 1T70A 4IYPC 2NXFA 1KBPA 4Q7FA 5IOHA 2WDDA 4OR9A 3H66A 5J28A 2NYLC 3P71C 3PSNA 4LTYA 1T71A 4H2IA 4H2BA 1XZWA 4JA7A 4I5LC 1W24A 5JPEA 3H63A 2AHDA 1OIDA 2DXLA 3PSOA 3QFKA 4V0WA 1Z2XA 3AV0A 4HD0A 5INBA 1XM7A 3EGGA 2WDCA 3QG5C 4FCXA 4H1YP 2O8AA 4NZVA 4UWQA 1II7A 2XMOA 3IB8A 4FBQA 2IAEC 4V0VA 1NNWA 1V73A 4H2FA 3GVEA 2P6BA 2ZBMA 3DSDA 1G5BA 1UF3A 2WDFA 4G9JA 4DSYA 3THOB 1OIEA 4MOYA 3ICFA 2Z1AA 2YEQA 4O5GA 5JJTA 1WAO1 3FLOA 2BQ8X 1UTEA 4ZVZA 3C9FA 4I5NC 1FJMA 3H69A 3H64A 4O43A 3IB7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2USH A;  3LL8 A;  3QFO A;  2Z06 A;  3QFN A;  2DFJ A;  5B8I A;  4M0V A;  4ORA A;  3V4Y A;  3H61 A;  1HO5 A;  4FBK A;  3ZU0 A;  4TUG A;  2NPP C;  4FBW A;  2R17 A;  3RL5 A;  5EQV A;  2NYM C;  3H60 A;  2BDX A;  4ORC A;  1Z2W A;  4DT2 A;  2IE3 C;  4O4K A;  1U32 A;  2QFR A;  4TUI A;  3C5W C;  4B2O A;  2QFP A;  2BCD A;  3DSC A;  1HP1 A;  1TCO A;  2HYO A;  2JOG A;  2O8G A;  3T1I A;  4UT2 A;  3H62 B;  4KKZ A;  5JPF A;  3CK2 A;  2QJC A;  2IE4 C;  1S3N A;  4KBP A;  4UT3 B;  4YKE A;  4O24 A;  4H1S A;  4WWL A;  4UT3 A;  3FGA C;  1JK7 A;  1S70 A;  2Z72 A;  5C1V A;  3DW8 C;  3RQZ A;  3JYF A;  4H2G A;  3RL4 A;  3TGH A;  4MP0 A;  4XPN A;  1S3M A;  4DHL A;  4ZX2 A;  3KBP A;  2KKN A;  3N5U A;  4MOV A;  3HVQ A;  3ZTV A;  1QHW A;  3IVE A;  2HYP A;  1MF8 A;  1S95 A;  4J6O A;  2CV9 A;  5DNY A;  1AUI A;  3E7A A;  3AUZ A;  3K7W C;  1S3L A;  4F0Z A;  2WDE A;  4V0X A;  1S8E A;  2Q8U A;  3RL3 A;  5HPE A;  1USH A;  1OI8 A;  4LAC C;  3QFM A;  3EGH A;  3H68 A;  1IT6 A;  3E7B A;  4IL1 A;  3K7V C;  4LU9 A;  1HPU A;  1WAR A;  4JA9 A;  2HY1 A;  3THN A;  4ORB A;  2GJU A;  5GTU A;  2YVT A;  1SU1 A;  5F3W A;  2A22 A;  3H67 A;  1QFC A;  1M63 A;  3IVD A;  1T70 A;  4IYP C;  2NXF A;  1KBP A;  4Q7F A;  5IOH A;  2WDD A;  4OR9 A;  3H66 A;  5J28 A;  2NYL C;  3P71 C;  3PSN A;  4LTY A;  1T71 A;  4H2I A;  4H2B A;  1XZW A;  4JA7 A;  4I5L C;  1W24 A;  5JPE A;  3H63 A;  2AHD A;  1OID A;  3PSO A;  3QFK A;  4V0W A;  1Z2X A;  3AV0 A;  4HD0 A;  5INB A;  1XM7 A;  3EGG A;  2WDC A;  3QG5 C;  4FCX A;  4H1Y P;  2O8A A;  4NZV A;  4UWQ A;  1II7 A;  2XMO A;  3IB8 A;  4FBQ A;  2IAE C;  4V0V A;  1NNW A;  1V73 A;  4H2F A;  3GVE A;  2P6B A;  2ZBM A;  3DSD A;  1G5B A;  1UF3 A;  2WDF A;  4G9J A;  4DSY A;  3THO B;  1OIE A;  4MOY A;  3ICF A;  2Z1A A;  4O5G A;  5JJT A;  1WAO 1;  2BQ8 X;  1UTE A;  4ZVZ A;  3C9F A;  4I5N C;  1FJM A;  3H69 A;  3H64 A;  4O43 A;  3IB7 A; 
#chains in the Genus database with same CATH topology
 2USH A;  3LL8 A;  3QFO A;  2Z06 A;  3QFN A;  2DFJ A;  5B8I A;  4M0V A;  4ORA A;  3V4Y A;  3H61 A;  1HO5 A;  4FBK A;  3ZU0 A;  4TUG A;  2NPP C;  4FBW A;  2R17 A;  3RL5 A;  5EQV A;  2NYM C;  3H60 A;  2BDX A;  4ORC A;  1Z2W A;  4DT2 A;  2DXN A;  2IE3 C;  4O4K A;  1U32 A;  2QFR A;  2ZOA A;  3C5W C;  4TUI A;  4B2O A;  2QFP A;  2BCD A;  3DSC A;  1HP1 A;  1TCO A;  2HYO A;  2JOG A;  2O8G A;  3T1I A;  4UT2 A;  3H62 B;  4KKZ A;  5JPF A;  3CK2 A;  2QJC A;  2IE4 C;  1S3N A;  4KBP A;  4UT3 B;  4YKE A;  4O24 A;  4H1S A;  4WWL A;  4UT3 A;  3FGA C;  1JK7 A;  1S70 A;  2Z72 A;  5C1V A;  2ZO9 B;  3DW8 C;  3RQZ A;  3JYF A;  4H2G A;  3RL4 A;  3TGH A;  4MP0 A;  4XPN A;  1S3M A;  4DHL A;  4ZX2 A;  3KBP A;  2KKN A;  3N5U A;  4MOV A;  3E0J A;  3HVQ A;  1QHW A;  3IVE A;  3ZTV A;  2HYP A;  1MF8 A;  1S95 A;  4J6O A;  2CV9 A;  5DNY A;  1AUI A;  3E7A A;  3AUZ A;  3K7W C;  1S3L A;  4F0Z A;  2WDE A;  4V0X A;  1S8E A;  2Q8U A;  3RL3 A;  5HPE A;  1USH A;  3D03 A;  1OI8 A;  4LAC C;  3QFM A;  3EGH A;  3H68 A;  1IT6 A;  3E7B A;  4IL1 A;  3K7V C;  4LU9 A;  1HPU A;  1WAR A;  4JA9 A;  2HY1 A;  3THN A;  4ORB A;  2GJU A;  5GTU A;  2YVT A;  1SU1 A;  5F3W A;  2A22 A;  3H67 A;  1QFC A;  1M63 A;  3IVD A;  1T70 A;  4IYP C;  2NXF A;  1KBP A;  4Q7F A;  5IOH A;  2WDD A;  4OR9 A;  3H66 A;  5J28 A;  2NYL C;  3P71 C;  3PSN A;  4LTY A;  1T71 A;  4H2I A;  4H2B A;  1XZW A;  4JA7 A;  4I5L C;  1W24 A;  5JPE A;  3H63 A;  2AHD A;  1OID A;  2DXL A;  3PSO A;  3QFK A;  4V0W A;  1Z2X A;  3AV0 A;  4HD0 A;  5INB A;  1XM7 A;  3EGG A;  2WDC A;  3QG5 C;  4FCX A;  4H1Y P;  2O8A A;  4NZV A;  4UWQ A;  1II7 A;  2XMO A;  3IB8 A;  4FBQ A;  2IAE C;  4V0V A;  1NNW A;  1V73 A;  4H2F A;  3GVE A;  2P6B A;  2ZBM A;  3DSD A;  1G5B A;  1UF3 A;  2WDF A;  4G9J A;  4DSY A;  3THO B;  1OIE A;  4MOY A;  3ICF A;  2Z1A A;  2YEQ A;  4O5G A;  5JJT A;  1WAO 1;  3FLO A;  2BQ8 X;  1UTE A;  4ZVZ A;  3C9F A;  4I5N C;  1FJM A;  3H69 A;  3H64 A;  4O43 A;  3IB7 A; 
#chains in the Genus database with same CATH homology
 2USH A;  3LL8 A;  3QFO A;  2Z06 A;  3QFN A;  2DFJ A;  5B8I A;  4M0V A;  4ORA A;  3V4Y A;  3H61 A;  1HO5 A;  4FBK A;  3ZU0 A;  4TUG A;  2NPP C;  4FBW A;  2R17 A;  3RL5 A;  5EQV A;  2NYM C;  3H60 A;  2BDX A;  4ORC A;  1Z2W A;  4DT2 A;  2DXN A;  2IE3 C;  4O4K A;  1U32 A;  2QFR A;  2ZOA A;  3C5W C;  4TUI A;  4B2O A;  2QFP A;  2BCD A;  3DSC A;  1HP1 A;  1TCO A;  2HYO A;  2JOG A;  2O8G A;  3T1I A;  4UT2 A;  3H62 B;  4KKZ A;  5JPF A;  3CK2 A;  2QJC A;  2IE4 C;  1S3N A;  4KBP A;  4UT3 B;  4YKE A;  4O24 A;  4H1S A;  4WWL A;  4UT3 A;  3FGA C;  1JK7 A;  1S70 A;  2Z72 A;  5C1V A;  2ZO9 B;  3DW8 C;  3RQZ A;  3JYF A;  4H2G A;  3RL4 A;  3TGH A;  4MP0 A;  4XPN A;  1S3M A;  4DHL A;  4ZX2 A;  3KBP A;  2KKN A;  3N5U A;  4MOV A;  3E0J A;  3HVQ A;  1QHW A;  3IVE A;  3ZTV A;  2HYP A;  1MF8 A;  1S95 A;  4J6O A;  2CV9 A;  5DNY A;  1AUI A;  3E7A A;  3AUZ A;  3K7W C;  1S3L A;  4F0Z A;  2WDE A;  4V0X A;  1S8E A;  2Q8U A;  3RL3 A;  5HPE A;  1USH A;  3D03 A;  1OI8 A;  4LAC C;  3QFM A;  3EGH A;  3H68 A;  1IT6 A;  3E7B A;  4IL1 A;  3K7V C;  4LU9 A;  1HPU A;  1WAR A;  4JA9 A;  2HY1 A;  3THN A;  4ORB A;  2GJU A;  5GTU A;  2YVT A;  1SU1 A;  5F3W A;  2A22 A;  3H67 A;  1QFC A;  1M63 A;  3IVD A;  1T70 A;  4IYP C;  2NXF A;  1KBP A;  4Q7F A;  5IOH A;  2WDD A;  4OR9 A;  3H66 A;  5J28 A;  2NYL C;  3P71 C;  3PSN A;  4LTY A;  1T71 A;  4H2I A;  4H2B A;  1XZW A;  4JA7 A;  4I5L C;  1W24 A;  5JPE A;  3H63 A;  2AHD A;  1OID A;  2DXL A;  3PSO A;  3QFK A;  4V0W A;  1Z2X A;  3AV0 A;  4HD0 A;  5INB A;  1XM7 A;  3EGG A;  2WDC A;  3QG5 C;  4FCX A;  4H1Y P;  2O8A A;  4NZV A;  4UWQ A;  1II7 A;  2XMO A;  3IB8 A;  4FBQ A;  2IAE C;  4V0V A;  1NNW A;  1V73 A;  4H2F A;  3GVE A;  2P6B A;  2ZBM A;  3DSD A;  1G5B A;  1UF3 A;  2WDF A;  4G9J A;  4DSY A;  3THO B;  1OIE A;  4MOY A;  3ICF A;  2Z1A A;  2YEQ A;  4O5G A;  5JJT A;  1WAO 1;  3FLO A;  2BQ8 X;  1UTE A;  4ZVZ A;  3C9F A;  4I5N C;  1FJM A;  3H69 A;  3H64 A;  4O43 A;  3IB7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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