4Q7FA

1.98 angstrom crystal structure of putative 5'-nucleotidase from staphylococcus aureus in complex with adenosine.
Total Genus 162
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
162
sequence length
510
structure length
510
Chain Sequence
SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal binding protein
molecule keywords 5' nucleotidase family protein
publication title 1.98 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with Adenosine.
rcsb
source organism Staphylococcus aureus subsp. aureus
total genus 162
structure length 510
sequence length 510
ec nomenclature
pdb deposition date 2014-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4q7fA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 4q7fA02
3PSNA 4F0ZA 2ZBMA 2A22A 1M63A 4MOVA 5JJTA 3H64A 1II7A 3DW8C 3THNA 2NPPC 3QFNA 2HYOA 2HY1A 2IE3C 4DSYA 1UF3A 1NNWA 1S8EA 3GVEA 1W24A 3IVEA 1UTEA 3PSOA 1HPUA 1AUIA 2O8GA 4ORCA 1Z2XA 5INBA 1Z2WA 2AHDA 3H60A 3JYFA 2P6BA 2WDEA 2Z1AA 1S3NA 2HYPA 4XPNA 2WDDA 4O5GA 4V0VA 2XMOA 3AV0A 4ZX2A 1WARA 4FBQA 4UT2A 1U32A 4IL1A 4O43A 3AUZA 3P71C 4NZVA 3LL8A 2WDCA 4B2OA 1SU1A 1XM7A 3H69A 4I5NC 4DHLA 5DNYA 3DSCA 1TCOA 4YKEA 1S95A 3C9FA 3H61A 4H2FA 4WWLA 3H66A 3T1IA 1G5BA 4J6OA 3QFMA 1IT6A 5C1VA 2QFPA 5HPEA 4UT3B 2NXFA 2YVTA 3H62B 3EGGA 3N5UA 4V0XA 4M0VA 2BDXA 3FGAC 5F3WA 2WDFA 3QFOA 1JK7A 1S3MA 3E7AA 2IE4C 2JOGA 3H63A 5GTUA 1QFCA 3KBPA 5IOHA 3IB7A 2QFRA 5JPEA 4ORAA 3DSDA 4G9JA 1OI8A 2CV9A 4FBWA 4O24A 2USHA 4JA9A 4TUIA 4H2BA 4FBKA 4MP0A 4JA7A 4UWQA 4ZVZA 1T71A 3TGHA 3E7BA 3IVDA 3ZU0A 5JPFA 1T70A 2Q8UA 2Z72A 1WAO1 2NYLC 2R17A 3V4YA 4DT2A 3ICFA 3RL4A 3RL3A 2BQ8X 2Z06A 1S70A 3H67A 4KBPA 1V73A 4O4KA 1FJMA 2IAEC 4FCXA 4HD0A 5EQVA 2NYMC 3C5WC 3RQZA 4ORBA 4V0WA 3QFKA 4MOYA 3THOB 1S3LA 2KKNA 3K7VC 1HO5A 1MF8A 4I5LC 1USHA 3EGHA 4H2IA 4Q7FA 3RL5A 1QHWA 4H2GA 1XZWA 2O8AA 4H1YP 1HP1A 3IB8A 4LU9A 1KBPA 3H68A 3QG5C 4LACC 4UT3A 4H1SA 4OR9A 4TUGA 4KKZA 3ZTVA 2GJUA 2DFJA 4IYPC 1OIDA 2QJCA 3K7WC 4LTYA 1OIEA 5B8IA 2BCDA 3CK2A 3HVQA 5J28A
chains in the Genus database with same CATH superfamily
3PSNA 4F0ZA 2ZBMA 2A22A 1M63A 4MOVA 5JJTA 3H64A 1II7A 3DW8C 3THNA 2NPPC 2DXLA 3QFNA 2HYOA 2HY1A 2IE3C 4DSYA 1UF3A 1NNWA 1S8EA 3GVEA 1W24A 3IVEA 1UTEA 3PSOA 1HPUA 1AUIA 2O8GA 4ORCA 1Z2XA 5INBA 1Z2WA 2AHDA 3H60A 3JYFA 2P6BA 2WDEA 2Z1AA 1S3NA 2HYPA 4XPNA 2WDDA 4O5GA 4V0VA 2XMOA 3AV0A 4ZX2A 1WARA 4FBQA 4UT2A 1U32A 4IL1A 4O43A 3AUZA 3P71C 4NZVA 3LL8A 2WDCA 4B2OA 2ZOAA 1SU1A 1XM7A 3H69A 4I5NC 4DHLA 5DNYA 3DSCA 1TCOA 4YKEA 1S95A 3C9FA 3H61A 4H2FA 4WWLA 3H66A 3T1IA 3D03A 1G5BA 4J6OA 3QFMA 1IT6A 5C1VA 2QFPA 5HPEA 4UT3B 2NXFA 2YVTA 3H62B 3EGGA 3N5UA 4V0XA 2DXNA 4M0VA 2BDXA 3FGAC 5F3WA 2WDFA 2ZO9B 1JK7A 1S3MA 3QFOA 3E7AA 2IE4C 2JOGA 3H63A 5GTUA 1QFCA 3KBPA 5IOHA 3IB7A 2QFRA 5JPEA 4ORAA 3DSDA 4G9JA 1OI8A 2CV9A 4FBWA 4O24A 2USHA 4JA9A 4TUIA 4H2BA 4FBKA 4MP0A 4JA7A 4UWQA 2YEQA 4ZVZA 1T71A 3TGHA 3E7BA 3IVDA 3ZU0A 5JPFA 1T70A 2Q8UA 2Z72A 1WAO1 2NYLC 2R17A 3V4YA 4DT2A 3ICFA 3RL4A 3RL3A 2BQ8X 1S70A 2Z06A 3H67A 4KBPA 1V73A 4O4KA 1FJMA 2IAEC 4FCXA 3FLOA 4HD0A 5EQVA 2NYMC 3C5WC 3RQZA 4ORBA 4V0WA 3QFKA 4MOYA 3THOB 1S3LA 2KKNA 3K7VC 1HO5A 1MF8A 4I5LC 1USHA 3EGHA 4H2IA 4Q7FA 3RL5A 1QHWA 4H2GA 1XZWA 2O8AA 4H1YP 1HP1A 3IB8A 4LU9A 1KBPA 3H68A 3QG5C 4LACC 4UT3A 4H1SA 4OR9A 4TUGA 4KKZA 3ZTVA 2GJUA 2DFJA 4IYPC 1OIDA 2QJCA 3K7WC 4LTYA 3E0JA 1OIEA 5B8IA 2BCDA 3CK2A 3HVQA 5J28A
chains in the Genus database with same CATH topology
3PSNA 4F0ZA 2ZBMA 2A22A 1M63A 4MOVA 5JJTA 3H64A 1II7A 3DW8C 3THNA 2NPPC 2DXLA 3QFNA 2HYOA 2HY1A 2IE3C 4DSYA 1UF3A 1NNWA 1S8EA 3GVEA 1W24A 3IVEA 1UTEA 3PSOA 1HPUA 1AUIA 2O8GA 4ORCA 1Z2XA 5INBA 1Z2WA 2AHDA 3H60A 3JYFA 2P6BA 2WDEA 2Z1AA 1S3NA 2HYPA 4XPNA 2WDDA 4O5GA 4V0VA 2XMOA 3AV0A 4ZX2A 1WARA 4FBQA 4UT2A 1U32A 4IL1A 4O43A 3AUZA 3P71C 4NZVA 3LL8A 2WDCA 4B2OA 2ZOAA 1SU1A 1XM7A 3H69A 4I5NC 4DHLA 5DNYA 3DSCA 1TCOA 4YKEA 1S95A 3C9FA 3H61A 4H2FA 4WWLA 3H66A 3T1IA 3D03A 1G5BA 4J6OA 3QFMA 1IT6A 5C1VA 2QFPA 5HPEA 4UT3B 2NXFA 2YVTA 3H62B 3EGGA 3N5UA 4V0XA 2DXNA 4M0VA 2BDXA 3FGAC 5F3WA 2WDFA 2ZO9B 1JK7A 1S3MA 3QFOA 3E7AA 2IE4C 2JOGA 3H63A 5GTUA 1QFCA 3KBPA 5IOHA 3IB7A 2QFRA 5JPEA 4ORAA 3DSDA 4G9JA 1OI8A 2CV9A 4FBWA 4O24A 2USHA 4JA9A 4TUIA 4H2BA 4FBKA 4MP0A 4JA7A 4UWQA 2YEQA 4ZVZA 1T71A 3TGHA 3E7BA 3IVDA 3ZU0A 5JPFA 1T70A 2Q8UA 2Z72A 1WAO1 2NYLC 2R17A 3V4YA 4DT2A 3ICFA 3RL4A 3RL3A 2BQ8X 1S70A 2Z06A 3H67A 4KBPA 1V73A 4O4KA 1FJMA 2IAEC 4FCXA 3FLOA 4HD0A 5EQVA 2NYMC 3C5WC 3RQZA 4ORBA 4V0WA 3QFKA 4MOYA 3THOB 1S3LA 2KKNA 3K7VC 1HO5A 1MF8A 4I5LC 1USHA 3EGHA 4H2IA 4Q7FA 3RL5A 1QHWA 4H2GA 1XZWA 2O8AA 4H1YP 1HP1A 3IB8A 4LU9A 1KBPA 3H68A 3QG5C 4LACC 4UT3A 4H1SA 4OR9A 4TUGA 4KKZA 3ZTVA 2GJUA 2DFJA 4IYPC 1OIDA 2QJCA 3K7WC 4LTYA 3E0JA 1OIEA 5B8IA 2BCDA 3CK2A 3HVQA 5J28A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PSN A;  4F0Z A;  2ZBM A;  2A22 A;  1M63 A;  4MOV A;  5JJT A;  3H64 A;  1II7 A;  3DW8 C;  3THN A;  2NPP C;  3QFN A;  2HYO A;  2HY1 A;  2IE3 C;  4DSY A;  1UF3 A;  1NNW A;  1S8E A;  3GVE A;  1W24 A;  3IVE A;  1UTE A;  3PSO A;  1HPU A;  1AUI A;  2O8G A;  4ORC A;  1Z2X A;  5INB A;  1Z2W A;  2AHD A;  3H60 A;  3JYF A;  2P6B A;  2WDE A;  2Z1A A;  1S3N A;  2HYP A;  4XPN A;  2WDD A;  4O5G A;  4V0V A;  2XMO A;  3AV0 A;  4ZX2 A;  1WAR A;  4FBQ A;  4UT2 A;  1U32 A;  4IL1 A;  4O43 A;  3AUZ A;  3P71 C;  4NZV A;  3LL8 A;  2WDC A;  4B2O A;  1SU1 A;  1XM7 A;  3H69 A;  4I5N C;  4DHL A;  5DNY A;  3DSC A;  1TCO A;  4YKE A;  1S95 A;  3C9F A;  3H61 A;  4H2F A;  4WWL A;  3H66 A;  3T1I A;  1G5B A;  4J6O A;  3QFM A;  1IT6 A;  5C1V A;  2QFP A;  5HPE A;  4UT3 B;  2NXF A;  2YVT A;  3H62 B;  3EGG A;  3N5U A;  4V0X A;  4M0V A;  2BDX A;  3FGA C;  5F3W A;  2WDF A;  3QFO A;  1JK7 A;  1S3M A;  3E7A A;  2IE4 C;  2JOG A;  3H63 A;  5GTU A;  1QFC A;  3KBP A;  5IOH A;  3IB7 A;  2QFR A;  5JPE A;  4ORA A;  3DSD A;  4G9J A;  1OI8 A;  2CV9 A;  4FBW A;  4O24 A;  2USH A;  4JA9 A;  4TUI A;  4H2B A;  4FBK A;  4MP0 A;  4JA7 A;  4UWQ A;  4ZVZ A;  1T71 A;  3TGH A;  3E7B A;  3IVD A;  3ZU0 A;  5JPF A;  1T70 A;  2Q8U A;  2Z72 A;  1WAO 1;  2NYL C;  2R17 A;  3V4Y A;  4DT2 A;  3ICF A;  3RL4 A;  3RL3 A;  2BQ8 X;  2Z06 A;  1S70 A;  3H67 A;  4KBP A;  1V73 A;  4O4K A;  1FJM A;  2IAE C;  4FCX A;  4HD0 A;  5EQV A;  2NYM C;  3C5W C;  3RQZ A;  4ORB A;  4V0W A;  3QFK A;  4MOY A;  3THO B;  1S3L A;  2KKN A;  3K7V C;  1HO5 A;  1MF8 A;  4I5L C;  1USH A;  3EGH A;  4H2I A;  4Q7F A;  3RL5 A;  1QHW A;  4H2G A;  1XZW A;  2O8A A;  4H1Y P;  1HP1 A;  3IB8 A;  4LU9 A;  1KBP A;  3H68 A;  3QG5 C;  4LAC C;  4UT3 A;  4H1S A;  4OR9 A;  4TUG A;  4KKZ A;  3ZTV A;  2GJU A;  2DFJ A;  4IYP C;  1OID A;  2QJC A;  3K7W C;  4LTY A;  1OIE A;  5B8I A;  2BCD A;  3CK2 A;  3HVQ A;  5J28 A; 
#chains in the Genus database with same CATH topology
 3PSN A;  4F0Z A;  2ZBM A;  2A22 A;  1M63 A;  4MOV A;  5JJT A;  3H64 A;  1II7 A;  3DW8 C;  3THN A;  2NPP C;  2DXL A;  3QFN A;  2HYO A;  2HY1 A;  2IE3 C;  4DSY A;  1UF3 A;  1NNW A;  1S8E A;  3GVE A;  1W24 A;  3IVE A;  1UTE A;  3PSO A;  1HPU A;  1AUI A;  2O8G A;  4ORC A;  1Z2X A;  5INB A;  1Z2W A;  2AHD A;  3H60 A;  3JYF A;  2P6B A;  2WDE A;  2Z1A A;  1S3N A;  2HYP A;  4XPN A;  2WDD A;  4O5G A;  4V0V A;  2XMO A;  3AV0 A;  4ZX2 A;  1WAR A;  4FBQ A;  4UT2 A;  1U32 A;  4IL1 A;  4O43 A;  3AUZ A;  3P71 C;  4NZV A;  3LL8 A;  2WDC A;  4B2O A;  2ZOA A;  1SU1 A;  1XM7 A;  3H69 A;  4I5N C;  4DHL A;  5DNY A;  3DSC A;  1TCO A;  4YKE A;  1S95 A;  3C9F A;  3H61 A;  4H2F A;  4WWL A;  3H66 A;  3T1I A;  3D03 A;  1G5B A;  4J6O A;  3QFM A;  1IT6 A;  5C1V A;  2QFP A;  5HPE A;  4UT3 B;  2NXF A;  2YVT A;  3H62 B;  3EGG A;  3N5U A;  4V0X A;  2DXN A;  4M0V A;  2BDX A;  3FGA C;  5F3W A;  2WDF A;  2ZO9 B;  1JK7 A;  1S3M A;  3QFO A;  3E7A A;  2IE4 C;  2JOG A;  3H63 A;  5GTU A;  1QFC A;  3KBP A;  5IOH A;  3IB7 A;  2QFR A;  5JPE A;  4ORA A;  3DSD A;  4G9J A;  1OI8 A;  2CV9 A;  4FBW A;  4O24 A;  2USH A;  4JA9 A;  4TUI A;  4H2B A;  4FBK A;  4MP0 A;  4JA7 A;  4UWQ A;  2YEQ A;  4ZVZ A;  1T71 A;  3TGH A;  3E7B A;  3IVD A;  3ZU0 A;  5JPF A;  1T70 A;  2Q8U A;  2Z72 A;  1WAO 1;  2NYL C;  2R17 A;  3V4Y A;  4DT2 A;  3ICF A;  3RL4 A;  3RL3 A;  2BQ8 X;  1S70 A;  2Z06 A;  3H67 A;  4KBP A;  1V73 A;  4O4K A;  1FJM A;  2IAE C;  4FCX A;  3FLO A;  4HD0 A;  5EQV A;  2NYM C;  3C5W C;  3RQZ A;  4ORB A;  4V0W A;  3QFK A;  4MOY A;  3THO B;  1S3L A;  2KKN A;  3K7V C;  1HO5 A;  1MF8 A;  4I5L C;  1USH A;  3EGH A;  4H2I A;  4Q7F A;  3RL5 A;  1QHW A;  4H2G A;  1XZW A;  2O8A A;  4H1Y P;  1HP1 A;  3IB8 A;  4LU9 A;  1KBP A;  3H68 A;  3QG5 C;  4LAC C;  4UT3 A;  4H1S A;  4OR9 A;  4TUG A;  4KKZ A;  3ZTV A;  2GJU A;  2DFJ A;  4IYP C;  1OID A;  2QJC A;  3K7W C;  4LTY A;  3E0J A;  1OIE A;  5B8I A;  2BCD A;  3CK2 A;  3HVQ A;  5J28 A; 
#chains in the Genus database with same CATH homology
 3PSN A;  4F0Z A;  2ZBM A;  2A22 A;  1M63 A;  4MOV A;  5JJT A;  3H64 A;  1II7 A;  3DW8 C;  3THN A;  2NPP C;  2DXL A;  3QFN A;  2HYO A;  2HY1 A;  2IE3 C;  4DSY A;  1UF3 A;  1NNW A;  1S8E A;  3GVE A;  1W24 A;  3IVE A;  1UTE A;  3PSO A;  1HPU A;  1AUI A;  2O8G A;  4ORC A;  1Z2X A;  5INB A;  1Z2W A;  2AHD A;  3H60 A;  3JYF A;  2P6B A;  2WDE A;  2Z1A A;  1S3N A;  2HYP A;  4XPN A;  2WDD A;  4O5G A;  4V0V A;  2XMO A;  3AV0 A;  4ZX2 A;  1WAR A;  4FBQ A;  4UT2 A;  1U32 A;  4IL1 A;  4O43 A;  3AUZ A;  3P71 C;  4NZV A;  3LL8 A;  2WDC A;  4B2O A;  2ZOA A;  1SU1 A;  1XM7 A;  3H69 A;  4I5N C;  4DHL A;  5DNY A;  3DSC A;  1TCO A;  4YKE A;  1S95 A;  3C9F A;  3H61 A;  4H2F A;  4WWL A;  3H66 A;  3T1I A;  3D03 A;  1G5B A;  4J6O A;  3QFM A;  1IT6 A;  5C1V A;  2QFP A;  5HPE A;  4UT3 B;  2NXF A;  2YVT A;  3H62 B;  3EGG A;  3N5U A;  4V0X A;  2DXN A;  4M0V A;  2BDX A;  3FGA C;  5F3W A;  2WDF A;  2ZO9 B;  1JK7 A;  1S3M A;  3QFO A;  3E7A A;  2IE4 C;  2JOG A;  3H63 A;  5GTU A;  1QFC A;  3KBP A;  5IOH A;  3IB7 A;  2QFR A;  5JPE A;  4ORA A;  3DSD A;  4G9J A;  1OI8 A;  2CV9 A;  4FBW A;  4O24 A;  2USH A;  4JA9 A;  4TUI A;  4H2B A;  4FBK A;  4MP0 A;  4JA7 A;  4UWQ A;  2YEQ A;  4ZVZ A;  1T71 A;  3TGH A;  3E7B A;  3IVD A;  3ZU0 A;  5JPF A;  1T70 A;  2Q8U A;  2Z72 A;  1WAO 1;  2NYL C;  2R17 A;  3V4Y A;  4DT2 A;  3ICF A;  3RL4 A;  3RL3 A;  2BQ8 X;  1S70 A;  2Z06 A;  3H67 A;  4KBP A;  1V73 A;  4O4K A;  1FJM A;  2IAE C;  4FCX A;  3FLO A;  4HD0 A;  5EQV A;  2NYM C;  3C5W C;  3RQZ A;  4ORB A;  4V0W A;  3QFK A;  4MOY A;  3THO B;  1S3L A;  2KKN A;  3K7V C;  1HO5 A;  1MF8 A;  4I5L C;  1USH A;  3EGH A;  4H2I A;  4Q7F A;  3RL5 A;  1QHW A;  4H2G A;  1XZW A;  2O8A A;  4H1Y P;  1HP1 A;  3IB8 A;  4LU9 A;  1KBP A;  3H68 A;  3QG5 C;  4LAC C;  4UT3 A;  4H1S A;  4OR9 A;  4TUG A;  4KKZ A;  3ZTV A;  2GJU A;  2DFJ A;  4IYP C;  1OID A;  2QJC A;  3K7W C;  4LTY A;  3E0J A;  1OIE A;  5B8I A;  2BCD A;  3CK2 A;  3HVQ A;  5J28 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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