4Q7FA

1.98 angstrom crystal structure of putative 5'-nucleotidase from staphylococcus aureus in complex with adenosine.
Total Genus 162
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
162
sequence length
510
structure length
510
Chain Sequence
SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Metal binding protein
source organism Staphylococcus aureus subsp. aureus
publication title 1.98 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with Adenosine.
rcsb
molecule keywords 5' nucleotidase family protein
total genus 162
structure length 510
sequence length 510
ec nomenclature
pdb deposition date 2014-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4q7fA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 4q7fA02
2BCDA 5JPFA 1QHWA 3QG5C 1IT6A 2Q8UA 4IYPC 3ZU0A 2GJUA 2Z72A 4O24A 3H66A 4H1YP 2JOGA 3AUZA 4Q7FA 1TCOA 4DT2A 4O43A 4LU9A 3THOB 4UT3A 4F0ZA 1UF3A 3QFNA 3ICFA 4FCXA 1M63A 1MF8A 3IVEA 5INBA 2BDXA 5JPEA 4JA9A 2Z1AA 1SU1A 4HD0A 3QFOA 5EQVA 2HYPA 4I5NC 4G9JA 4WWLA 3PSOA 1HP1A 3LL8A 4XPNA 3ZTVA 3E7AA 1T71A 4J6OA 2CV9A 1KBPA 1S8EA 3IB8A 4H2BA 3P71C 5C1VA 1AUIA 2QFPA 1V73A 4FBQA 4V0VA 3H62B 3EGHA 1II7A 1FJMA 4ZVZA 3IB7A 5B8IA 3C9FA 4UT2A 1S3MA 4UWQA 1QFCA 3RL4A 4LACC 5J28A 4B2OA 3H69A 4M0VA 4V0WA 4H2FA 4TUGA 5F3WA 3H60A 4H2IA 3KBPA 3RL5A 5GTUA 4ORBA 4MOYA 4YKEA 1USHA 2BQ8X 2DFJA 4UT3B 2Z06A 4OR9A 5JJTA 2P6BA 1S70A 4ORCA 2WDEA 1G5BA 3RQZA 4DHLA 1T70A 2IAEC 3RL3A 1HPUA 2R17A 4IL1A 1OI8A 4JA7A 2AHDA 1XM7A 4ZX2A 2ZBMA 2O8GA 4MOVA 5HPEA 3H64A 3V4YA 2QFRA 4MP0A 1W24A 4FBWA 1S3LA 4O5GA 3N5UA 2WDDA 4O4KA 4LTYA 3C5WC 2QJCA 2NYMC 3DW8C 4KBPA 1S95A 2NYLC 2USHA 2NPPC 1XZWA 3PSNA 1OIEA 4H1SA 3QFMA 3T1IA 3EGGA 3H67A 5DNYA 3THNA 3AV0A 4KKZA 4NZVA 2KKNA 2A22A 1NNWA 1U32A 2HYOA 3DSDA 3TGHA 1HO5A 1WAO1 3K7WC 4TUIA 1UTEA 2IE4C 3H68A 1WARA 1OIDA 1JK7A 3JYFA 1Z2XA 1Z2WA 3GVEA 5IOHA 2O8AA 3H63A 2WDFA 2NXFA 3QFKA 4FBKA 4DSYA 1S3NA 3FGAC 3H61A 3CK2A 4I5LC 3HVQA 2YVTA 3DSCA 4H2GA 3K7VC 4V0XA 2XMOA 3E7BA 3IVDA 4ORAA 2IE3C 2HY1A 2WDCA
chains in the Genus database with same CATH superfamily
2BCDA 5JPFA 1QHWA 3QG5C 1IT6A 2Q8UA 4IYPC 3ZU0A 2GJUA 2Z72A 4O24A 3H66A 4H1YP 2JOGA 3AUZA 4Q7FA 1TCOA 4DT2A 4O43A 4LU9A 3THOB 4UT3A 4F0ZA 1UF3A 3QFNA 3ICFA 4FCXA 1M63A 1MF8A 3IVEA 5INBA 2BDXA 5JPEA 4JA9A 2Z1AA 1SU1A 4HD0A 3QFOA 5EQVA 2HYPA 4I5NC 3D03A 4G9JA 4WWLA 3PSOA 1HP1A 3LL8A 4XPNA 3ZTVA 3E7AA 1T71A 4J6OA 2CV9A 1KBPA 1S8EA 3IB8A 4H2BA 3P71C 5C1VA 1AUIA 2QFPA 1V73A 2ZOAA 4FBQA 4V0VA 3H62B 3EGHA 1II7A 1FJMA 4ZVZA 3IB7A 5B8IA 3C9FA 4UT2A 1S3MA 3E0JA 4UWQA 1QFCA 3RL4A 4LACC 5J28A 4B2OA 3H69A 4M0VA 4V0WA 4H2FA 4TUGA 5F3WA 3H60A 4H2IA 3KBPA 3RL5A 5GTUA 4ORBA 4MOYA 4YKEA 1USHA 2BQ8X 2DFJA 4UT3B 2Z06A 4OR9A 5JJTA 2P6BA 1S70A 4ORCA 2WDEA 1G5BA 3RQZA 4DHLA 1T70A 2IAEC 3RL3A 1HPUA 2R17A 4IL1A 1OI8A 4JA7A 2AHDA 1XM7A 4ZX2A 2ZBMA 2O8GA 2DXNA 4MOVA 5HPEA 3FLOA 3H64A 3V4YA 2QFRA 4MP0A 1W24A 4FBWA 1S3LA 4O5GA 3N5UA 2WDDA 4O4KA 4LTYA 3C5WC 2QJCA 2NYMC 3DW8C 4KBPA 1S95A 2NYLC 2USHA 2NPPC 1XZWA 3PSNA 1OIEA 4H1SA 3QFMA 3T1IA 3EGGA 3H67A 5DNYA 3THNA 3AV0A 4KKZA 4NZVA 2KKNA 2A22A 1NNWA 1U32A 2HYOA 3DSDA 3TGHA 1HO5A 1WAO1 3K7WC 4TUIA 1UTEA 2IE4C 3H68A 1WARA 1OIDA 1JK7A 3JYFA 1Z2XA 1Z2WA 3GVEA 5IOHA 2O8AA 3H63A 2WDFA 2NXFA 2YEQA 3QFKA 4FBKA 4DSYA 1S3NA 3FGAC 2DXLA 2ZO9B 3H61A 3CK2A 4I5LC 3HVQA 2YVTA 3DSCA 4H2GA 3K7VC 4V0XA 2XMOA 3E7BA 3IVDA 4ORAA 2IE3C 2HY1A 2WDCA
chains in the Genus database with same CATH topology
2BCDA 5JPFA 1QHWA 3QG5C 1IT6A 2Q8UA 4IYPC 3ZU0A 2GJUA 2Z72A 4O24A 3H66A 4H1YP 2JOGA 3AUZA 4Q7FA 1TCOA 4DT2A 4O43A 4LU9A 3THOB 4UT3A 4F0ZA 1UF3A 3QFNA 3ICFA 4FCXA 1M63A 1MF8A 3IVEA 5INBA 2BDXA 5JPEA 4JA9A 2Z1AA 1SU1A 4HD0A 3QFOA 5EQVA 2HYPA 4I5NC 3D03A 4G9JA 4WWLA 3PSOA 1HP1A 3LL8A 4XPNA 3ZTVA 3E7AA 1T71A 4J6OA 2CV9A 1KBPA 1S8EA 3IB8A 4H2BA 3P71C 5C1VA 1AUIA 2QFPA 1V73A 2ZOAA 4FBQA 4V0VA 3H62B 3EGHA 1II7A 1FJMA 4ZVZA 3IB7A 5B8IA 3C9FA 4UT2A 1S3MA 3E0JA 4UWQA 1QFCA 3RL4A 4LACC 5J28A 4B2OA 3H69A 4M0VA 4V0WA 4H2FA 4TUGA 5F3WA 3H60A 4H2IA 3KBPA 3RL5A 5GTUA 4ORBA 4MOYA 4YKEA 1USHA 2BQ8X 2DFJA 4UT3B 2Z06A 4OR9A 5JJTA 2P6BA 1S70A 4ORCA 2WDEA 1G5BA 3RQZA 4DHLA 1T70A 2IAEC 3RL3A 1HPUA 2R17A 4IL1A 1OI8A 4JA7A 2AHDA 1XM7A 4ZX2A 2ZBMA 2O8GA 2DXNA 4MOVA 5HPEA 3FLOA 3H64A 3V4YA 2QFRA 4MP0A 1W24A 4FBWA 1S3LA 4O5GA 3N5UA 2WDDA 4O4KA 4LTYA 3C5WC 2QJCA 2NYMC 3DW8C 4KBPA 1S95A 2NYLC 2USHA 2NPPC 1XZWA 3PSNA 1OIEA 4H1SA 3QFMA 3T1IA 3EGGA 3H67A 5DNYA 3THNA 3AV0A 4KKZA 4NZVA 2KKNA 2A22A 1NNWA 1U32A 2HYOA 3DSDA 3TGHA 1HO5A 1WAO1 3K7WC 4TUIA 1UTEA 2IE4C 3H68A 1WARA 1OIDA 1JK7A 3JYFA 1Z2XA 1Z2WA 3GVEA 5IOHA 2O8AA 3H63A 2WDFA 2NXFA 2YEQA 3QFKA 4FBKA 4DSYA 1S3NA 3FGAC 2DXLA 2ZO9B 3H61A 3CK2A 4I5LC 3HVQA 2YVTA 3DSCA 4H2GA 3K7VC 4V0XA 2XMOA 3E7BA 3IVDA 4ORAA 2IE3C 2HY1A 2WDCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BCD A;  5JPF A;  1QHW A;  3QG5 C;  1IT6 A;  2Q8U A;  4IYP C;  3ZU0 A;  2GJU A;  2Z72 A;  4O24 A;  3H66 A;  4H1Y P;  2JOG A;  3AUZ A;  4Q7F A;  1TCO A;  4DT2 A;  4O43 A;  4LU9 A;  3THO B;  4UT3 A;  4F0Z A;  1UF3 A;  3QFN A;  3ICF A;  4FCX A;  1M63 A;  1MF8 A;  3IVE A;  5INB A;  2BDX A;  5JPE A;  4JA9 A;  2Z1A A;  1SU1 A;  4HD0 A;  3QFO A;  5EQV A;  2HYP A;  4I5N C;  4G9J A;  4WWL A;  3PSO A;  1HP1 A;  3LL8 A;  4XPN A;  3ZTV A;  3E7A A;  1T71 A;  4J6O A;  2CV9 A;  1KBP A;  1S8E A;  3IB8 A;  4H2B A;  3P71 C;  5C1V A;  1AUI A;  2QFP A;  1V73 A;  4FBQ A;  4V0V A;  3H62 B;  3EGH A;  1II7 A;  1FJM A;  4ZVZ A;  3IB7 A;  5B8I A;  3C9F A;  4UT2 A;  1S3M A;  4UWQ A;  1QFC A;  3RL4 A;  4LAC C;  5J28 A;  4B2O A;  3H69 A;  4M0V A;  4V0W A;  4H2F A;  4TUG A;  5F3W A;  3H60 A;  4H2I A;  3KBP A;  3RL5 A;  5GTU A;  4ORB A;  4MOY A;  4YKE A;  1USH A;  2BQ8 X;  2DFJ A;  4UT3 B;  2Z06 A;  4OR9 A;  5JJT A;  2P6B A;  1S70 A;  4ORC A;  2WDE A;  1G5B A;  3RQZ A;  4DHL A;  1T70 A;  2IAE C;  3RL3 A;  1HPU A;  2R17 A;  4IL1 A;  1OI8 A;  4JA7 A;  2AHD A;  1XM7 A;  4ZX2 A;  2ZBM A;  2O8G A;  4MOV A;  5HPE A;  3H64 A;  3V4Y A;  2QFR A;  4MP0 A;  1W24 A;  4FBW A;  1S3L A;  4O5G A;  3N5U A;  2WDD A;  4O4K A;  4LTY A;  3C5W C;  2QJC A;  2NYM C;  3DW8 C;  4KBP A;  1S95 A;  2NYL C;  2USH A;  2NPP C;  1XZW A;  3PSN A;  1OIE A;  4H1S A;  3QFM A;  3T1I A;  3EGG A;  3H67 A;  5DNY A;  3THN A;  3AV0 A;  4KKZ A;  4NZV A;  2KKN A;  2A22 A;  1NNW A;  1U32 A;  2HYO A;  3DSD A;  3TGH A;  1HO5 A;  1WAO 1;  3K7W C;  4TUI A;  1UTE A;  2IE4 C;  3H68 A;  1WAR A;  1OID A;  1JK7 A;  3JYF A;  1Z2X A;  1Z2W A;  3GVE A;  5IOH A;  2O8A A;  3H63 A;  2WDF A;  2NXF A;  3QFK A;  4FBK A;  4DSY A;  1S3N A;  3FGA C;  3H61 A;  3CK2 A;  4I5L C;  3HVQ A;  2YVT A;  3DSC A;  4H2G A;  3K7V C;  4V0X A;  2XMO A;  3E7B A;  3IVD A;  4ORA A;  2IE3 C;  2HY1 A;  2WDC A; 
#chains in the Genus database with same CATH topology
 2BCD A;  5JPF A;  1QHW A;  3QG5 C;  1IT6 A;  2Q8U A;  4IYP C;  3ZU0 A;  2GJU A;  2Z72 A;  4O24 A;  3H66 A;  4H1Y P;  2JOG A;  3AUZ A;  4Q7F A;  1TCO A;  4DT2 A;  4O43 A;  4LU9 A;  3THO B;  4UT3 A;  4F0Z A;  1UF3 A;  3QFN A;  3ICF A;  4FCX A;  1M63 A;  1MF8 A;  3IVE A;  5INB A;  2BDX A;  5JPE A;  4JA9 A;  2Z1A A;  1SU1 A;  4HD0 A;  3QFO A;  5EQV A;  2HYP A;  4I5N C;  3D03 A;  4G9J A;  4WWL A;  3PSO A;  1HP1 A;  3LL8 A;  4XPN A;  3ZTV A;  3E7A A;  1T71 A;  4J6O A;  2CV9 A;  1KBP A;  1S8E A;  3IB8 A;  4H2B A;  3P71 C;  5C1V A;  1AUI A;  2QFP A;  1V73 A;  2ZOA A;  4FBQ A;  4V0V A;  3H62 B;  3EGH A;  1II7 A;  1FJM A;  4ZVZ A;  3IB7 A;  5B8I A;  3C9F A;  4UT2 A;  1S3M A;  3E0J A;  4UWQ A;  1QFC A;  3RL4 A;  4LAC C;  5J28 A;  4B2O A;  3H69 A;  4M0V A;  4V0W A;  4H2F A;  4TUG A;  5F3W A;  3H60 A;  4H2I A;  3KBP A;  3RL5 A;  5GTU A;  4ORB A;  4MOY A;  4YKE A;  1USH A;  2BQ8 X;  2DFJ A;  4UT3 B;  2Z06 A;  4OR9 A;  5JJT A;  2P6B A;  1S70 A;  4ORC A;  2WDE A;  1G5B A;  3RQZ A;  4DHL A;  1T70 A;  2IAE C;  3RL3 A;  1HPU A;  2R17 A;  4IL1 A;  1OI8 A;  4JA7 A;  2AHD A;  1XM7 A;  4ZX2 A;  2ZBM A;  2O8G A;  2DXN A;  4MOV A;  5HPE A;  3FLO A;  3H64 A;  3V4Y A;  2QFR A;  4MP0 A;  1W24 A;  4FBW A;  1S3L A;  4O5G A;  3N5U A;  2WDD A;  4O4K A;  4LTY A;  3C5W C;  2QJC A;  2NYM C;  3DW8 C;  4KBP A;  1S95 A;  2NYL C;  2USH A;  2NPP C;  1XZW A;  3PSN A;  1OIE A;  4H1S A;  3QFM A;  3T1I A;  3EGG A;  3H67 A;  5DNY A;  3THN A;  3AV0 A;  4KKZ A;  4NZV A;  2KKN A;  2A22 A;  1NNW A;  1U32 A;  2HYO A;  3DSD A;  3TGH A;  1HO5 A;  1WAO 1;  3K7W C;  4TUI A;  1UTE A;  2IE4 C;  3H68 A;  1WAR A;  1OID A;  1JK7 A;  3JYF A;  1Z2X A;  1Z2W A;  3GVE A;  5IOH A;  2O8A A;  3H63 A;  2WDF A;  2NXF A;  2YEQ A;  3QFK A;  4FBK A;  4DSY A;  1S3N A;  3FGA C;  2DXL A;  2ZO9 B;  3H61 A;  3CK2 A;  4I5L C;  3HVQ A;  2YVT A;  3DSC A;  4H2G A;  3K7V C;  4V0X A;  2XMO A;  3E7B A;  3IVD A;  4ORA A;  2IE3 C;  2HY1 A;  2WDC A; 
#chains in the Genus database with same CATH homology
 2BCD A;  5JPF A;  1QHW A;  3QG5 C;  1IT6 A;  2Q8U A;  4IYP C;  3ZU0 A;  2GJU A;  2Z72 A;  4O24 A;  3H66 A;  4H1Y P;  2JOG A;  3AUZ A;  4Q7F A;  1TCO A;  4DT2 A;  4O43 A;  4LU9 A;  3THO B;  4UT3 A;  4F0Z A;  1UF3 A;  3QFN A;  3ICF A;  4FCX A;  1M63 A;  1MF8 A;  3IVE A;  5INB A;  2BDX A;  5JPE A;  4JA9 A;  2Z1A A;  1SU1 A;  4HD0 A;  3QFO A;  5EQV A;  2HYP A;  4I5N C;  3D03 A;  4G9J A;  4WWL A;  3PSO A;  1HP1 A;  3LL8 A;  4XPN A;  3ZTV A;  3E7A A;  1T71 A;  4J6O A;  2CV9 A;  1KBP A;  1S8E A;  3IB8 A;  4H2B A;  3P71 C;  5C1V A;  1AUI A;  2QFP A;  1V73 A;  2ZOA A;  4FBQ A;  4V0V A;  3H62 B;  3EGH A;  1II7 A;  1FJM A;  4ZVZ A;  3IB7 A;  5B8I A;  3C9F A;  4UT2 A;  1S3M A;  3E0J A;  4UWQ A;  1QFC A;  3RL4 A;  4LAC C;  5J28 A;  4B2O A;  3H69 A;  4M0V A;  4V0W A;  4H2F A;  4TUG A;  5F3W A;  3H60 A;  4H2I A;  3KBP A;  3RL5 A;  5GTU A;  4ORB A;  4MOY A;  4YKE A;  1USH A;  2BQ8 X;  2DFJ A;  4UT3 B;  2Z06 A;  4OR9 A;  5JJT A;  2P6B A;  1S70 A;  4ORC A;  2WDE A;  1G5B A;  3RQZ A;  4DHL A;  1T70 A;  2IAE C;  3RL3 A;  1HPU A;  2R17 A;  4IL1 A;  1OI8 A;  4JA7 A;  2AHD A;  1XM7 A;  4ZX2 A;  2ZBM A;  2O8G A;  2DXN A;  4MOV A;  5HPE A;  3FLO A;  3H64 A;  3V4Y A;  2QFR A;  4MP0 A;  1W24 A;  4FBW A;  1S3L A;  4O5G A;  3N5U A;  2WDD A;  4O4K A;  4LTY A;  3C5W C;  2QJC A;  2NYM C;  3DW8 C;  4KBP A;  1S95 A;  2NYL C;  2USH A;  2NPP C;  1XZW A;  3PSN A;  1OIE A;  4H1S A;  3QFM A;  3T1I A;  3EGG A;  3H67 A;  5DNY A;  3THN A;  3AV0 A;  4KKZ A;  4NZV A;  2KKN A;  2A22 A;  1NNW A;  1U32 A;  2HYO A;  3DSD A;  3TGH A;  1HO5 A;  1WAO 1;  3K7W C;  4TUI A;  1UTE A;  2IE4 C;  3H68 A;  1WAR A;  1OID A;  1JK7 A;  3JYF A;  1Z2X A;  1Z2W A;  3GVE A;  5IOH A;  2O8A A;  3H63 A;  2WDF A;  2NXF A;  2YEQ A;  3QFK A;  4FBK A;  4DSY A;  1S3N A;  3FGA C;  2DXL A;  2ZO9 B;  3H61 A;  3CK2 A;  4I5L C;  3HVQ A;  2YVT A;  3DSC A;  4H2G A;  3K7V C;  4V0X A;  2XMO A;  3E7B A;  3IVD A;  4ORA A;  2IE3 C;  2HY1 A;  2WDC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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