4Q7FA

1.98 angstrom crystal structure of putative 5'-nucleotidase from staphylococcus aureus in complex with adenosine.
Total Genus 162
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
162
sequence length
510
structure length
510
Chain Sequence
b'SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title 1.98 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with Adenosine.
rcsb
molecule keywords 5' nucleotidase family protein
source organism Staphylococcus aureus subsp. aureus
molecule tags Metal binding protein
total genus 162
structure length 510
sequence length 510
ec nomenclature
pdb deposition date 2014-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4q7fA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 4q7fA02
3H68A 3N5UA 5F3WA 2HYPA 4MOYA 4WWLA 1AUIA 3RQZA 3PSOA 1V73A 2WDCA 1SU1A 2NXFA 3H63A 3IVEA 4ZVZA 4O24A 5EQVA 4H1YP 3QG5C 1JK7A 2Z1AA 1W24A 4UT3B 3E7BA 3QFMA 2YVTA 1S3LA 4IL1A 1FJMA 4G9JA 2Q8UA 4OR9A 5HPEA 2USHA 4O43A 4J6OA 2NYMC 2XMOA 3H61A 2AHDA 3C9FA 1OIEA 2IE3C 1HP1A 1NNWA 4HD0A 1S3MA 3FGAC 1HO5A 3K7WC 5JPEA 4FBKA 3LL8A 5IOHA 1S70A 3T1IA 5JPFA 3QFOA 4Q7FA 3GVEA 3H67A 4IYPC 3EGHA 4B2OA 3TGHA 4H1SA 3AV0A 1T70A 3AUZA 4XPNA 2QFRA 4F0ZA 1S3NA 5INBA 4DSYA 4MP0A 3DW8C 1G5BA 4FBWA 3H69A 4KBPA 3H66A 1UF3A 4O5GA 4ZX2A 3IB7A 2R17A 5GTUA 2HYOA 3CK2A 4H2IA 2NYLC 3HVQA 3K7VC 1MF8A 2BQ8X 2O8GA 1OI8A 4FCXA 4DHLA 3H62B 1UTEA 4FBQA 1S95A 2HY1A 4JA9A 4ORCA 3IVDA 1QHWA 2WDEA 3ZU0A 4DT2A 4UT3A 1M63A 1WAO1 3H60A 2A22A 3THOB 5JJTA 3ICFA 4MOVA 1XM7A 4ORAA 3RL4A 2QJCA 1HPUA 3JYFA 1U32A 3H64A 1IT6A 4H2FA 2CV9A 4M0VA 5B8IA 4LU9A 2BDXA 1T71A 4JA7A 1Z2WA 3PSNA 5DNYA 2IE4C 3DSCA 2P6BA 2QFPA 4UWQA 1OIDA 3C5WC 4V0XA 2Z72A 4H2BA 2ZBMA 3KBPA 4KKZA 2KKNA 3QFKA 4LTYA 3RL5A 4UT2A 2JOGA 2Z06A 3RL3A 1XZWA 4H2GA 3THNA 4NZVA 4TUGA 4LACC 4V0VA 3IB8A 2WDFA 3P71C 5J28A 3DSDA 4V0WA 3ZTVA 5C1VA 3EGGA 1S8EA 1WARA 4I5NC 4ORBA 2O8AA 1II7A 1Z2XA 3E7AA 4TUIA 2GJUA 1QFCA 4O4KA 3QFNA 4YKEA 1TCOA 3V4YA 2IAEC 1USHA 2BCDA 2DFJA 4I5LC 1KBPA 2NPPC 2WDDA
chains in the Genus database with same CATH superfamily
2DXNA 3H68A 3N5UA 5F3WA 2HYPA 4MOYA 4WWLA 1AUIA 3RQZA 3PSOA 1V73A 2WDCA 1SU1A 2NXFA 3H63A 3IVEA 4ZVZA 4O24A 5EQVA 4H1YP 3QG5C 1JK7A 3D03A 2Z1AA 1W24A 4UT3B 3E7BA 3QFMA 2YVTA 1S3LA 4IL1A 1FJMA 4G9JA 2Q8UA 4OR9A 5HPEA 2USHA 4O43A 4J6OA 2NYMC 2XMOA 3H61A 2AHDA 3C9FA 1OIEA 2IE3C 1HP1A 1NNWA 4HD0A 1S3MA 3FGAC 1HO5A 3K7WC 5JPEA 4FBKA 3LL8A 5IOHA 1S70A 3T1IA 2ZOAA 5JPFA 3QFOA 4Q7FA 3GVEA 3H67A 3E0JA 4IYPC 3EGHA 4B2OA 3TGHA 4H1SA 3AV0A 1T70A 3AUZA 4XPNA 2QFRA 4F0ZA 1S3NA 5INBA 4DSYA 4MP0A 3DW8C 1G5BA 4FBWA 3H69A 4KBPA 3H66A 1UF3A 2ZO9B 4O5GA 4ZX2A 3IB7A 2R17A 5GTUA 2HYOA 3CK2A 4H2IA 2NYLC 3HVQA 3K7VC 1MF8A 2BQ8X 2O8GA 1OI8A 4FCXA 4DHLA 3H62B 1UTEA 4FBQA 1S95A 2HY1A 4JA9A 4ORCA 3IVDA 1QHWA 2WDEA 3ZU0A 4DT2A 4UT3A 1M63A 1WAO1 3H60A 2A22A 3THOB 5JJTA 3ICFA 2YEQA 4MOVA 1XM7A 4ORAA 3RL4A 2QJCA 1HPUA 3JYFA 1U32A 3H64A 1IT6A 4H2FA 2CV9A 4M0VA 5B8IA 4LU9A 2BDXA 1T71A 4JA7A 3FLOA 1Z2WA 3PSNA 5DNYA 2IE4C 3DSCA 2P6BA 2QFPA 4UWQA 1OIDA 3C5WC 4V0XA 2Z72A 2DXLA 2ZBMA 3KBPA 4H2BA 4KKZA 2KKNA 3QFKA 4LTYA 3RL5A 4UT2A 2JOGA 2Z06A 3RL3A 1XZWA 4H2GA 3THNA 4NZVA 4TUGA 4LACC 4V0VA 3IB8A 2WDFA 3P71C 5J28A 3DSDA 4V0WA 3ZTVA 5C1VA 3EGGA 1S8EA 1WARA 4I5NC 4ORBA 2O8AA 1II7A 1Z2XA 3E7AA 4TUIA 2GJUA 1QFCA 4O4KA 3QFNA 4YKEA 1TCOA 3V4YA 2IAEC 1USHA 2BCDA 2DFJA 4I5LC 1KBPA 2NPPC 2WDDA
chains in the Genus database with same CATH topology
2DXNA 3H68A 3N5UA 5F3WA 2HYPA 4MOYA 4WWLA 1AUIA 3RQZA 3PSOA 1V73A 2WDCA 1SU1A 2NXFA 3H63A 3IVEA 4ZVZA 4O24A 5EQVA 4H1YP 3QG5C 1JK7A 3D03A 2Z1AA 1W24A 4UT3B 3E7BA 3QFMA 2YVTA 1S3LA 4IL1A 1FJMA 4G9JA 2Q8UA 4OR9A 5HPEA 2USHA 4O43A 4J6OA 2NYMC 2XMOA 3H61A 2AHDA 3C9FA 1OIEA 2IE3C 1HP1A 1NNWA 4HD0A 1S3MA 3FGAC 1HO5A 3K7WC 5JPEA 4FBKA 3LL8A 5IOHA 1S70A 3T1IA 2ZOAA 5JPFA 3QFOA 4Q7FA 3GVEA 3H67A 3E0JA 4IYPC 3EGHA 4B2OA 3TGHA 4H1SA 3AV0A 1T70A 3AUZA 4XPNA 2QFRA 4F0ZA 1S3NA 5INBA 4DSYA 4MP0A 3DW8C 1G5BA 4FBWA 3H69A 4KBPA 3H66A 1UF3A 2ZO9B 4O5GA 4ZX2A 3IB7A 2R17A 5GTUA 2HYOA 3CK2A 4H2IA 2NYLC 3HVQA 3K7VC 1MF8A 2BQ8X 2O8GA 1OI8A 4FCXA 4DHLA 3H62B 1UTEA 4FBQA 1S95A 2HY1A 4JA9A 4ORCA 3IVDA 1QHWA 2WDEA 3ZU0A 4DT2A 4UT3A 1M63A 1WAO1 3H60A 2A22A 3THOB 5JJTA 3ICFA 2YEQA 4MOVA 1XM7A 4ORAA 3RL4A 2QJCA 1HPUA 3JYFA 1U32A 3H64A 1IT6A 4H2FA 2CV9A 4M0VA 5B8IA 4LU9A 2BDXA 1T71A 4JA7A 3FLOA 1Z2WA 3PSNA 5DNYA 2IE4C 3DSCA 2P6BA 2QFPA 4UWQA 1OIDA 3C5WC 4V0XA 2Z72A 2DXLA 2ZBMA 3KBPA 4H2BA 4KKZA 2KKNA 3QFKA 4LTYA 3RL5A 4UT2A 2JOGA 2Z06A 3RL3A 1XZWA 4H2GA 3THNA 4NZVA 4TUGA 4LACC 4V0VA 3IB8A 2WDFA 3P71C 5J28A 3DSDA 4V0WA 3ZTVA 5C1VA 3EGGA 1S8EA 1WARA 4I5NC 4ORBA 2O8AA 1II7A 1Z2XA 3E7AA 4TUIA 2GJUA 1QFCA 4O4KA 3QFNA 4YKEA 1TCOA 3V4YA 2IAEC 1USHA 2BCDA 2DFJA 4I5LC 1KBPA 2NPPC 2WDDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3H68 A;  3N5U A;  5F3W A;  2HYP A;  4MOY A;  4WWL A;  1AUI A;  3RQZ A;  3PSO A;  1V73 A;  2WDC A;  1SU1 A;  2NXF A;  3H63 A;  3IVE A;  4ZVZ A;  4O24 A;  5EQV A;  4H1Y P;  3QG5 C;  1JK7 A;  2Z1A A;  1W24 A;  4UT3 B;  3E7B A;  3QFM A;  2YVT A;  1S3L A;  4IL1 A;  1FJM A;  4G9J A;  2Q8U A;  4OR9 A;  5HPE A;  2USH A;  4O43 A;  4J6O A;  2NYM C;  2XMO A;  3H61 A;  2AHD A;  3C9F A;  1OIE A;  2IE3 C;  1HP1 A;  1NNW A;  4HD0 A;  1S3M A;  3FGA C;  1HO5 A;  3K7W C;  5JPE A;  4FBK A;  3LL8 A;  5IOH A;  1S70 A;  3T1I A;  5JPF A;  3QFO A;  4Q7F A;  3GVE A;  3H67 A;  4IYP C;  3EGH A;  4B2O A;  3TGH A;  4H1S A;  3AV0 A;  1T70 A;  3AUZ A;  4XPN A;  2QFR A;  4F0Z A;  1S3N A;  5INB A;  4DSY A;  4MP0 A;  3DW8 C;  1G5B A;  4FBW A;  3H69 A;  4KBP A;  3H66 A;  1UF3 A;  4O5G A;  4ZX2 A;  3IB7 A;  2R17 A;  5GTU A;  2HYO A;  3CK2 A;  4H2I A;  2NYL C;  3HVQ A;  3K7V C;  1MF8 A;  2BQ8 X;  2O8G A;  1OI8 A;  4FCX A;  4DHL A;  3H62 B;  1UTE A;  4FBQ A;  1S95 A;  2HY1 A;  4JA9 A;  4ORC A;  3IVD A;  1QHW A;  2WDE A;  3ZU0 A;  4DT2 A;  4UT3 A;  1M63 A;  1WAO 1;  3H60 A;  2A22 A;  3THO B;  5JJT A;  3ICF A;  4MOV A;  1XM7 A;  4ORA A;  3RL4 A;  2QJC A;  1HPU A;  3JYF A;  1U32 A;  3H64 A;  1IT6 A;  4H2F A;  2CV9 A;  4M0V A;  5B8I A;  4LU9 A;  2BDX A;  1T71 A;  4JA7 A;  1Z2W A;  3PSN A;  5DNY A;  2IE4 C;  3DSC A;  2P6B A;  2QFP A;  4UWQ A;  1OID A;  3C5W C;  4V0X A;  2Z72 A;  4H2B A;  2ZBM A;  3KBP A;  4KKZ A;  2KKN A;  3QFK A;  4LTY A;  3RL5 A;  4UT2 A;  2JOG A;  2Z06 A;  3RL3 A;  1XZW A;  4H2G A;  3THN A;  4NZV A;  4TUG A;  4LAC C;  4V0V A;  3IB8 A;  2WDF A;  3P71 C;  5J28 A;  3DSD A;  4V0W A;  3ZTV A;  5C1V A;  3EGG A;  1S8E A;  1WAR A;  4I5N C;  4ORB A;  2O8A A;  1II7 A;  1Z2X A;  3E7A A;  4TUI A;  2GJU A;  1QFC A;  4O4K A;  3QFN A;  4YKE A;  1TCO A;  3V4Y A;  2IAE C;  1USH A;  2BCD A;  2DFJ A;  4I5L C;  1KBP A;  2NPP C;  2WDD A; 
#chains in the Genus database with same CATH topology
 2DXN A;  3H68 A;  3N5U A;  5F3W A;  2HYP A;  4MOY A;  4WWL A;  1AUI A;  3RQZ A;  3PSO A;  1V73 A;  2WDC A;  1SU1 A;  2NXF A;  3H63 A;  3IVE A;  4ZVZ A;  4O24 A;  5EQV A;  4H1Y P;  3QG5 C;  1JK7 A;  3D03 A;  2Z1A A;  1W24 A;  4UT3 B;  3E7B A;  3QFM A;  2YVT A;  1S3L A;  4IL1 A;  1FJM A;  4G9J A;  2Q8U A;  4OR9 A;  5HPE A;  2USH A;  4O43 A;  4J6O A;  2NYM C;  2XMO A;  3H61 A;  2AHD A;  3C9F A;  1OIE A;  2IE3 C;  1HP1 A;  1NNW A;  4HD0 A;  1S3M A;  3FGA C;  1HO5 A;  3K7W C;  5JPE A;  4FBK A;  3LL8 A;  5IOH A;  1S70 A;  3T1I A;  2ZOA A;  5JPF A;  3QFO A;  4Q7F A;  3GVE A;  3H67 A;  3E0J A;  4IYP C;  3EGH A;  4B2O A;  3TGH A;  4H1S A;  3AV0 A;  1T70 A;  3AUZ A;  4XPN A;  2QFR A;  4F0Z A;  1S3N A;  5INB A;  4DSY A;  4MP0 A;  3DW8 C;  1G5B A;  4FBW A;  3H69 A;  4KBP A;  3H66 A;  1UF3 A;  2ZO9 B;  4O5G A;  4ZX2 A;  3IB7 A;  2R17 A;  5GTU A;  2HYO A;  3CK2 A;  4H2I A;  2NYL C;  3HVQ A;  3K7V C;  1MF8 A;  2BQ8 X;  2O8G A;  1OI8 A;  4FCX A;  4DHL A;  3H62 B;  1UTE A;  4FBQ A;  1S95 A;  2HY1 A;  4JA9 A;  4ORC A;  3IVD A;  1QHW A;  2WDE A;  3ZU0 A;  4DT2 A;  4UT3 A;  1M63 A;  1WAO 1;  3H60 A;  2A22 A;  3THO B;  5JJT A;  3ICF A;  2YEQ A;  4MOV A;  1XM7 A;  4ORA A;  3RL4 A;  2QJC A;  1HPU A;  3JYF A;  1U32 A;  3H64 A;  1IT6 A;  4H2F A;  2CV9 A;  4M0V A;  5B8I A;  4LU9 A;  2BDX A;  1T71 A;  4JA7 A;  3FLO A;  1Z2W A;  3PSN A;  5DNY A;  2IE4 C;  3DSC A;  2P6B A;  2QFP A;  4UWQ A;  1OID A;  3C5W C;  4V0X A;  2Z72 A;  2DXL A;  2ZBM A;  3KBP A;  4H2B A;  4KKZ A;  2KKN A;  3QFK A;  4LTY A;  3RL5 A;  4UT2 A;  2JOG A;  2Z06 A;  3RL3 A;  1XZW A;  4H2G A;  3THN A;  4NZV A;  4TUG A;  4LAC C;  4V0V A;  3IB8 A;  2WDF A;  3P71 C;  5J28 A;  3DSD A;  4V0W A;  3ZTV A;  5C1V A;  3EGG A;  1S8E A;  1WAR A;  4I5N C;  4ORB A;  2O8A A;  1II7 A;  1Z2X A;  3E7A A;  4TUI A;  2GJU A;  1QFC A;  4O4K A;  3QFN A;  4YKE A;  1TCO A;  3V4Y A;  2IAE C;  1USH A;  2BCD A;  2DFJ A;  4I5L C;  1KBP A;  2NPP C;  2WDD A; 
#chains in the Genus database with same CATH homology
 2DXN A;  3H68 A;  3N5U A;  5F3W A;  2HYP A;  4MOY A;  4WWL A;  1AUI A;  3RQZ A;  3PSO A;  1V73 A;  2WDC A;  1SU1 A;  2NXF A;  3H63 A;  3IVE A;  4ZVZ A;  4O24 A;  5EQV A;  4H1Y P;  3QG5 C;  1JK7 A;  3D03 A;  2Z1A A;  1W24 A;  4UT3 B;  3E7B A;  3QFM A;  2YVT A;  1S3L A;  4IL1 A;  1FJM A;  4G9J A;  2Q8U A;  4OR9 A;  5HPE A;  2USH A;  4O43 A;  4J6O A;  2NYM C;  2XMO A;  3H61 A;  2AHD A;  3C9F A;  1OIE A;  2IE3 C;  1HP1 A;  1NNW A;  4HD0 A;  1S3M A;  3FGA C;  1HO5 A;  3K7W C;  5JPE A;  4FBK A;  3LL8 A;  5IOH A;  1S70 A;  3T1I A;  2ZOA A;  5JPF A;  3QFO A;  4Q7F A;  3GVE A;  3H67 A;  3E0J A;  4IYP C;  3EGH A;  4B2O A;  3TGH A;  4H1S A;  3AV0 A;  1T70 A;  3AUZ A;  4XPN A;  2QFR A;  4F0Z A;  1S3N A;  5INB A;  4DSY A;  4MP0 A;  3DW8 C;  1G5B A;  4FBW A;  3H69 A;  4KBP A;  3H66 A;  1UF3 A;  2ZO9 B;  4O5G A;  4ZX2 A;  3IB7 A;  2R17 A;  5GTU A;  2HYO A;  3CK2 A;  4H2I A;  2NYL C;  3HVQ A;  3K7V C;  1MF8 A;  2BQ8 X;  2O8G A;  1OI8 A;  4FCX A;  4DHL A;  3H62 B;  1UTE A;  4FBQ A;  1S95 A;  2HY1 A;  4JA9 A;  4ORC A;  3IVD A;  1QHW A;  2WDE A;  3ZU0 A;  4DT2 A;  4UT3 A;  1M63 A;  1WAO 1;  3H60 A;  2A22 A;  3THO B;  5JJT A;  3ICF A;  2YEQ A;  4MOV A;  1XM7 A;  4ORA A;  3RL4 A;  2QJC A;  1HPU A;  3JYF A;  1U32 A;  3H64 A;  1IT6 A;  4H2F A;  2CV9 A;  4M0V A;  5B8I A;  4LU9 A;  2BDX A;  1T71 A;  4JA7 A;  3FLO A;  1Z2W A;  3PSN A;  5DNY A;  2IE4 C;  3DSC A;  2P6B A;  2QFP A;  4UWQ A;  1OID A;  3C5W C;  4V0X A;  2Z72 A;  2DXL A;  2ZBM A;  3KBP A;  4H2B A;  4KKZ A;  2KKN A;  3QFK A;  4LTY A;  3RL5 A;  4UT2 A;  2JOG A;  2Z06 A;  3RL3 A;  1XZW A;  4H2G A;  3THN A;  4NZV A;  4TUG A;  4LAC C;  4V0V A;  3IB8 A;  2WDF A;  3P71 C;  5J28 A;  3DSD A;  4V0W A;  3ZTV A;  5C1V A;  3EGG A;  1S8E A;  1WAR A;  4I5N C;  4ORB A;  2O8A A;  1II7 A;  1Z2X A;  3E7A A;  4TUI A;  2GJU A;  1QFC A;  4O4K A;  3QFN A;  4YKE A;  1TCO A;  3V4Y A;  2IAE C;  1USH A;  2BCD A;  2DFJ A;  4I5L C;  1KBP A;  2NPP C;  2WDD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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