4Q7FA

1.98 angstrom crystal structure of putative 5'-nucleotidase from staphylococcus aureus in complex with adenosine.
Total Genus 162
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
162
sequence length
510
structure length
510
Chain Sequence
SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords 5' nucleotidase family protein
publication title 1.98 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with Adenosine.
rcsb
source organism Staphylococcus aureus subsp. aureus
molecule tags Metal binding protein
total genus 162
structure length 510
sequence length 510
ec nomenclature
pdb deposition date 2014-04-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4q7fA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 4q7fA02
1XZWA 2NPPC 2P6BA 3H69A 2IE3C 4ORBA 3C5WC 2YVTA 2BDXA 4ZX2A 4O4KA 3THOB 3RL4A 3ZTVA 2CV9A 4IL1A 3C9FA 3IB8A 4DSYA 4FBWA 1S95A 2AHDA 1T71A 2BQ8X 4NZVA 4H2GA 1WAO1 1S8EA 3QFNA 1TCOA 3DW8C 4H2FA 1HP1A 4I5LC 3THNA 3HVQA 3CK2A 4KBPA 4MOYA 4H2BA 2DFJA 2IE4C 1S3MA 1HPUA 1KBPA 2Q8UA 2BCDA 4FCXA 4LACC 4KKZA 2ZBMA 1QHWA 3KBPA 4DT2A 4Q7FA 3QG5C 4V0XA 3V4YA 3DSDA 2A22A 1OIEA 2Z72A 1UTEA 5JJTA 4DHLA 1XM7A 1M63A 1IT6A 5J28A 2QFRA 4G9JA 2JOGA 4B2OA 3E7AA 2NYMC 5HPEA 4UT3A 4ZVZA 3PSOA 4H1YP 2KKNA 4WWLA 3H66A 3P71C 3ICFA 3N5UA 3LL8A 4MOVA 3RL5A 4YKEA 1W24A 3H67A 3IB7A 3PSNA 3RQZA 1NNWA 1QFCA 4I5NC 4JA9A 2IAEC 1OIDA 2USHA 2O8AA 3H61A 1WARA 4O43A 3H68A 3K7VC 2NYLC 4UT2A 2HYPA 1USHA 1G5BA 4HD0A 3IVEA 1JK7A 4IYPC 3AV0A 1AUIA 3H60A 3H64A 2HYOA 1T70A 5B8IA 3QFOA 2Z06A 2Z1AA 2GJUA 1U32A 1Z2XA 2NXFA 2WDCA 3E7BA 4O5GA 1S70A 5IOHA 4J6OA 4UWQA 5F3WA 5DNYA 3JYFA 5GTUA 3EGHA 3ZU0A 5JPEA 2HY1A 1V73A 4FBQA 4ORAA 5C1VA 1FJMA 4FBKA 5INBA 4XPNA 1HO5A 3IVDA 3EGGA 2QFPA 4O24A 4JA7A 1SU1A 3DSCA 2XMOA 1Z2WA 3QFMA 4V0VA 2QJCA 2O8GA 3QFKA 4F0ZA 2WDEA 3FGAC 4MP0A 4UT3B 4H1SA 4V0WA 1OI8A 4LTYA 3RL3A 1S3NA 2R17A 3H63A 3T1IA 1MF8A 2WDFA 5EQVA 4M0VA 5JPFA 1S3LA 3H62B 3AUZA 3K7WC 4TUGA 4TUIA 4LU9A 1UF3A 2WDDA 4H2IA 4OR9A 3GVEA 4ORCA 1II7A 3TGHA
chains in the Genus database with same CATH superfamily
1XZWA 2NPPC 2P6BA 3H69A 2IE3C 4ORBA 3C5WC 2YVTA 2BDXA 4ZX2A 4O4KA 3THOB 3RL4A 3ZTVA 2CV9A 4IL1A 3C9FA 3IB8A 4DSYA 4FBWA 1S95A 2AHDA 1T71A 2BQ8X 4NZVA 4H2GA 1WAO1 1S8EA 3QFNA 1TCOA 3DW8C 4H2FA 1HP1A 4I5LC 3THNA 3HVQA 3CK2A 4KBPA 4MOYA 4H2BA 2DFJA 2IE4C 1S3MA 1HPUA 1KBPA 2Q8UA 2BCDA 4FCXA 4LACC 4KKZA 2ZBMA 1QHWA 3KBPA 4DT2A 4Q7FA 3QG5C 4V0XA 3V4YA 3DSDA 2A22A 1OIEA 3E0JA 2Z72A 3FLOA 1UTEA 5JJTA 4DHLA 1XM7A 1M63A 1IT6A 5J28A 2QFRA 4G9JA 2JOGA 4B2OA 3E7AA 2NYMC 5HPEA 4UT3A 4ZVZA 3PSOA 4H1YP 2KKNA 2YEQA 4WWLA 2DXLA 3H66A 3P71C 3ICFA 3N5UA 3LL8A 4MOVA 3RL5A 4YKEA 1W24A 3H67A 3IB7A 3PSNA 3RQZA 1NNWA 1QFCA 3D03A 4I5NC 4JA9A 2ZOAA 2IAEC 1OIDA 2USHA 2O8AA 3H61A 1WARA 4O43A 3H68A 3K7VC 2NYLC 4UT2A 2HYPA 1USHA 1G5BA 4HD0A 3IVEA 1JK7A 4IYPC 3AV0A 1AUIA 3H60A 3H64A 2HYOA 1T70A 2ZO9B 3QFOA 5B8IA 2Z06A 2Z1AA 2GJUA 1U32A 1Z2XA 2NXFA 2WDCA 3E7BA 4O5GA 1S70A 5IOHA 4J6OA 4UWQA 5F3WA 5DNYA 3JYFA 5GTUA 3EGHA 3ZU0A 5JPEA 2HY1A 1V73A 4FBQA 4ORAA 5C1VA 1FJMA 4FBKA 5INBA 4XPNA 1HO5A 3IVDA 3EGGA 2QFPA 4O24A 4JA7A 1SU1A 3DSCA 2XMOA 1Z2WA 3QFMA 4V0VA 2QJCA 2O8GA 3QFKA 4F0ZA 2WDEA 3FGAC 4MP0A 4UT3B 4H1SA 4V0WA 1OI8A 4LTYA 3RL3A 1S3NA 2R17A 3H63A 3T1IA 1MF8A 2WDFA 5EQVA 4M0VA 2DXNA 5JPFA 1S3LA 3H62B 3AUZA 3K7WC 4TUGA 4TUIA 4LU9A 1UF3A 2WDDA 4H2IA 4OR9A 3GVEA 4ORCA 1II7A 3TGHA
chains in the Genus database with same CATH topology
1XZWA 2NPPC 2P6BA 3H69A 2IE3C 4ORBA 3C5WC 2YVTA 2BDXA 4ZX2A 4O4KA 3THOB 3RL4A 3ZTVA 2CV9A 4IL1A 3C9FA 3IB8A 4DSYA 4FBWA 1S95A 2AHDA 1T71A 2BQ8X 4NZVA 4H2GA 1WAO1 1S8EA 3QFNA 1TCOA 3DW8C 4H2FA 1HP1A 4I5LC 3THNA 3HVQA 3CK2A 4KBPA 4MOYA 4H2BA 2DFJA 2IE4C 1S3MA 1HPUA 1KBPA 2Q8UA 2BCDA 4FCXA 4LACC 4KKZA 2ZBMA 1QHWA 3KBPA 4DT2A 4Q7FA 3QG5C 4V0XA 3V4YA 3DSDA 2A22A 1OIEA 3E0JA 2Z72A 3FLOA 1UTEA 5JJTA 4DHLA 1XM7A 1M63A 1IT6A 5J28A 2QFRA 4G9JA 2JOGA 4B2OA 3E7AA 2NYMC 5HPEA 4UT3A 4ZVZA 3PSOA 4H1YP 2KKNA 2YEQA 4WWLA 2DXLA 3H66A 3P71C 3ICFA 3N5UA 3LL8A 4MOVA 3RL5A 4YKEA 1W24A 3H67A 3IB7A 3PSNA 3RQZA 1NNWA 1QFCA 3D03A 4I5NC 4JA9A 2ZOAA 2IAEC 1OIDA 2USHA 2O8AA 3H61A 1WARA 4O43A 3H68A 3K7VC 2NYLC 4UT2A 2HYPA 1USHA 1G5BA 4HD0A 3IVEA 1JK7A 4IYPC 3AV0A 1AUIA 3H60A 3H64A 2HYOA 1T70A 2ZO9B 3QFOA 5B8IA 2Z06A 2Z1AA 2GJUA 1U32A 1Z2XA 2NXFA 2WDCA 3E7BA 4O5GA 1S70A 5IOHA 4J6OA 4UWQA 5F3WA 5DNYA 3JYFA 5GTUA 3EGHA 3ZU0A 5JPEA 2HY1A 1V73A 4FBQA 4ORAA 5C1VA 1FJMA 4FBKA 5INBA 4XPNA 1HO5A 3IVDA 3EGGA 2QFPA 4O24A 4JA7A 1SU1A 3DSCA 2XMOA 1Z2WA 3QFMA 4V0VA 2QJCA 2O8GA 3QFKA 4F0ZA 2WDEA 3FGAC 4MP0A 4UT3B 4H1SA 4V0WA 1OI8A 4LTYA 3RL3A 1S3NA 2R17A 3H63A 3T1IA 1MF8A 2WDFA 5EQVA 4M0VA 2DXNA 5JPFA 1S3LA 3H62B 3AUZA 3K7WC 4TUGA 4TUIA 4LU9A 1UF3A 2WDDA 4H2IA 4OR9A 3GVEA 4ORCA 1II7A 3TGHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1XZW A;  2NPP C;  2P6B A;  3H69 A;  2IE3 C;  4ORB A;  3C5W C;  2YVT A;  2BDX A;  4ZX2 A;  4O4K A;  3THO B;  3RL4 A;  3ZTV A;  2CV9 A;  4IL1 A;  3C9F A;  3IB8 A;  4DSY A;  4FBW A;  1S95 A;  2AHD A;  1T71 A;  2BQ8 X;  4NZV A;  4H2G A;  1WAO 1;  1S8E A;  3QFN A;  1TCO A;  3DW8 C;  4H2F A;  1HP1 A;  4I5L C;  3THN A;  3HVQ A;  3CK2 A;  4KBP A;  4MOY A;  4H2B A;  2DFJ A;  2IE4 C;  1S3M A;  1HPU A;  1KBP A;  2Q8U A;  2BCD A;  4FCX A;  4LAC C;  4KKZ A;  2ZBM A;  1QHW A;  3KBP A;  4DT2 A;  4Q7F A;  3QG5 C;  4V0X A;  3V4Y A;  3DSD A;  2A22 A;  1OIE A;  2Z72 A;  1UTE A;  5JJT A;  4DHL A;  1XM7 A;  1M63 A;  1IT6 A;  5J28 A;  2QFR A;  4G9J A;  2JOG A;  4B2O A;  3E7A A;  2NYM C;  5HPE A;  4UT3 A;  4ZVZ A;  3PSO A;  4H1Y P;  2KKN A;  4WWL A;  3H66 A;  3P71 C;  3ICF A;  3N5U A;  3LL8 A;  4MOV A;  3RL5 A;  4YKE A;  1W24 A;  3H67 A;  3IB7 A;  3PSN A;  3RQZ A;  1NNW A;  1QFC A;  4I5N C;  4JA9 A;  2IAE C;  1OID A;  2USH A;  2O8A A;  3H61 A;  1WAR A;  4O43 A;  3H68 A;  3K7V C;  2NYL C;  4UT2 A;  2HYP A;  1USH A;  1G5B A;  4HD0 A;  3IVE A;  1JK7 A;  4IYP C;  3AV0 A;  1AUI A;  3H60 A;  3H64 A;  2HYO A;  1T70 A;  5B8I A;  3QFO A;  2Z06 A;  2Z1A A;  2GJU A;  1U32 A;  1Z2X A;  2NXF A;  2WDC A;  3E7B A;  4O5G A;  1S70 A;  5IOH A;  4J6O A;  4UWQ A;  5F3W A;  5DNY A;  3JYF A;  5GTU A;  3EGH A;  3ZU0 A;  5JPE A;  2HY1 A;  1V73 A;  4FBQ A;  4ORA A;  5C1V A;  1FJM A;  4FBK A;  5INB A;  4XPN A;  1HO5 A;  3IVD A;  3EGG A;  2QFP A;  4O24 A;  4JA7 A;  1SU1 A;  3DSC A;  2XMO A;  1Z2W A;  3QFM A;  4V0V A;  2QJC A;  2O8G A;  3QFK A;  4F0Z A;  2WDE A;  3FGA C;  4MP0 A;  4UT3 B;  4H1S A;  4V0W A;  1OI8 A;  4LTY A;  3RL3 A;  1S3N A;  2R17 A;  3H63 A;  3T1I A;  1MF8 A;  2WDF A;  5EQV A;  4M0V A;  5JPF A;  1S3L A;  3H62 B;  3AUZ A;  3K7W C;  4TUG A;  4TUI A;  4LU9 A;  1UF3 A;  2WDD A;  4H2I A;  4OR9 A;  3GVE A;  4ORC A;  1II7 A;  3TGH A; 
#chains in the Genus database with same CATH topology
 1XZW A;  2NPP C;  2P6B A;  3H69 A;  2IE3 C;  4ORB A;  3C5W C;  2YVT A;  2BDX A;  4ZX2 A;  4O4K A;  3THO B;  3RL4 A;  3ZTV A;  2CV9 A;  4IL1 A;  3C9F A;  3IB8 A;  4DSY A;  4FBW A;  1S95 A;  2AHD A;  1T71 A;  2BQ8 X;  4NZV A;  4H2G A;  1WAO 1;  1S8E A;  3QFN A;  1TCO A;  3DW8 C;  4H2F A;  1HP1 A;  4I5L C;  3THN A;  3HVQ A;  3CK2 A;  4KBP A;  4MOY A;  4H2B A;  2DFJ A;  2IE4 C;  1S3M A;  1HPU A;  1KBP A;  2Q8U A;  2BCD A;  4FCX A;  4LAC C;  4KKZ A;  2ZBM A;  1QHW A;  3KBP A;  4DT2 A;  4Q7F A;  3QG5 C;  4V0X A;  3V4Y A;  3DSD A;  2A22 A;  1OIE A;  3E0J A;  2Z72 A;  3FLO A;  1UTE A;  5JJT A;  4DHL A;  1XM7 A;  1M63 A;  1IT6 A;  5J28 A;  2QFR A;  4G9J A;  2JOG A;  4B2O A;  3E7A A;  2NYM C;  5HPE A;  4UT3 A;  4ZVZ A;  3PSO A;  4H1Y P;  2KKN A;  2YEQ A;  4WWL A;  2DXL A;  3H66 A;  3P71 C;  3ICF A;  3N5U A;  3LL8 A;  4MOV A;  3RL5 A;  4YKE A;  1W24 A;  3H67 A;  3IB7 A;  3PSN A;  3RQZ A;  1NNW A;  1QFC A;  3D03 A;  4I5N C;  4JA9 A;  2ZOA A;  2IAE C;  1OID A;  2USH A;  2O8A A;  3H61 A;  1WAR A;  4O43 A;  3H68 A;  3K7V C;  2NYL C;  4UT2 A;  2HYP A;  1USH A;  1G5B A;  4HD0 A;  3IVE A;  1JK7 A;  4IYP C;  3AV0 A;  1AUI A;  3H60 A;  3H64 A;  2HYO A;  1T70 A;  2ZO9 B;  3QFO A;  5B8I A;  2Z06 A;  2Z1A A;  2GJU A;  1U32 A;  1Z2X A;  2NXF A;  2WDC A;  3E7B A;  4O5G A;  1S70 A;  5IOH A;  4J6O A;  4UWQ A;  5F3W A;  5DNY A;  3JYF A;  5GTU A;  3EGH A;  3ZU0 A;  5JPE A;  2HY1 A;  1V73 A;  4FBQ A;  4ORA A;  5C1V A;  1FJM A;  4FBK A;  5INB A;  4XPN A;  1HO5 A;  3IVD A;  3EGG A;  2QFP A;  4O24 A;  4JA7 A;  1SU1 A;  3DSC A;  2XMO A;  1Z2W A;  3QFM A;  4V0V A;  2QJC A;  2O8G A;  3QFK A;  4F0Z A;  2WDE A;  3FGA C;  4MP0 A;  4UT3 B;  4H1S A;  4V0W A;  1OI8 A;  4LTY A;  3RL3 A;  1S3N A;  2R17 A;  3H63 A;  3T1I A;  1MF8 A;  2WDF A;  5EQV A;  4M0V A;  2DXN A;  5JPF A;  1S3L A;  3H62 B;  3AUZ A;  3K7W C;  4TUG A;  4TUI A;  4LU9 A;  1UF3 A;  2WDD A;  4H2I A;  4OR9 A;  3GVE A;  4ORC A;  1II7 A;  3TGH A; 
#chains in the Genus database with same CATH homology
 1XZW A;  2NPP C;  2P6B A;  3H69 A;  2IE3 C;  4ORB A;  3C5W C;  2YVT A;  2BDX A;  4ZX2 A;  4O4K A;  3THO B;  3RL4 A;  3ZTV A;  2CV9 A;  4IL1 A;  3C9F A;  3IB8 A;  4DSY A;  4FBW A;  1S95 A;  2AHD A;  1T71 A;  2BQ8 X;  4NZV A;  4H2G A;  1WAO 1;  1S8E A;  3QFN A;  1TCO A;  3DW8 C;  4H2F A;  1HP1 A;  4I5L C;  3THN A;  3HVQ A;  3CK2 A;  4KBP A;  4MOY A;  4H2B A;  2DFJ A;  2IE4 C;  1S3M A;  1HPU A;  1KBP A;  2Q8U A;  2BCD A;  4FCX A;  4LAC C;  4KKZ A;  2ZBM A;  1QHW A;  3KBP A;  4DT2 A;  4Q7F A;  3QG5 C;  4V0X A;  3V4Y A;  3DSD A;  2A22 A;  1OIE A;  3E0J A;  2Z72 A;  3FLO A;  1UTE A;  5JJT A;  4DHL A;  1XM7 A;  1M63 A;  1IT6 A;  5J28 A;  2QFR A;  4G9J A;  2JOG A;  4B2O A;  3E7A A;  2NYM C;  5HPE A;  4UT3 A;  4ZVZ A;  3PSO A;  4H1Y P;  2KKN A;  2YEQ A;  4WWL A;  2DXL A;  3H66 A;  3P71 C;  3ICF A;  3N5U A;  3LL8 A;  4MOV A;  3RL5 A;  4YKE A;  1W24 A;  3H67 A;  3IB7 A;  3PSN A;  3RQZ A;  1NNW A;  1QFC A;  3D03 A;  4I5N C;  4JA9 A;  2ZOA A;  2IAE C;  1OID A;  2USH A;  2O8A A;  3H61 A;  1WAR A;  4O43 A;  3H68 A;  3K7V C;  2NYL C;  4UT2 A;  2HYP A;  1USH A;  1G5B A;  4HD0 A;  3IVE A;  1JK7 A;  4IYP C;  3AV0 A;  1AUI A;  3H60 A;  3H64 A;  2HYO A;  1T70 A;  2ZO9 B;  3QFO A;  5B8I A;  2Z06 A;  2Z1A A;  2GJU A;  1U32 A;  1Z2X A;  2NXF A;  2WDC A;  3E7B A;  4O5G A;  1S70 A;  5IOH A;  4J6O A;  4UWQ A;  5F3W A;  5DNY A;  3JYF A;  5GTU A;  3EGH A;  3ZU0 A;  5JPE A;  2HY1 A;  1V73 A;  4FBQ A;  4ORA A;  5C1V A;  1FJM A;  4FBK A;  5INB A;  4XPN A;  1HO5 A;  3IVD A;  3EGG A;  2QFP A;  4O24 A;  4JA7 A;  1SU1 A;  3DSC A;  2XMO A;  1Z2W A;  3QFM A;  4V0V A;  2QJC A;  2O8G A;  3QFK A;  4F0Z A;  2WDE A;  3FGA C;  4MP0 A;  4UT3 B;  4H1S A;  4V0W A;  1OI8 A;  4LTY A;  3RL3 A;  1S3N A;  2R17 A;  3H63 A;  3T1I A;  1MF8 A;  2WDF A;  5EQV A;  4M0V A;  2DXN A;  5JPF A;  1S3L A;  3H62 B;  3AUZ A;  3K7W C;  4TUG A;  4TUI A;  4LU9 A;  1UF3 A;  2WDD A;  4H2I A;  4OR9 A;  3GVE A;  4ORC A;  1II7 A;  3TGH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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