3FGAC

Structural basis of pp2a and sgo interaction
Total Genus 99
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
99
sequence length
308
structure length
303
Chain Sequence
b'DEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRTRRTPDYFL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure and function of the PP2A-shugoshin interaction
pubmed doi rcsb
molecule keywords Serine/threonine-protein phosphatase 2A 65 kDa regulatory su
source organism Mus musculus
molecule tags Hydrolase/hydrolase inhibitor
total genus 99
structure length 303
sequence length 308
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2008-12-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3fgaC00
3ZTVA 1Z2XA 3KBPA 4DSYA 3H63A 2QFPA 3H69A 3QFNA 4IYPC 1KBPA 3C9FA 3IB7A 1S3MA 3H61A 4LU9A 2BCDA 1WAO1 4YKEA 1M63A 1U32A 3IB8A 3IVDA 4I5LC 1QFCA 2IE4C 3TGHA 3E7BA 4UWQA 3QFKA 4O5GA 4DHLA 2USHA 5JJTA 4TUIA 5EQVA 5B8IA 2NYLC 1G5BA 3RL4A 4ORBA 3H67A 4G9JA 4H1YP 2Z1AA 1S3LA 1XZWA 3RQZA 1SU1A 4B2OA 4KKZA 2P6BA 1S3NA 2QFRA 3H64A 4H2IA 1JK7A 3H66A 1USHA 2WDEA 2WDCA 2NYMC 1T70A 2NXFA 3PSNA 4O4KA 3H60A 3ICFA 2AHDA 1Z2WA 1TCOA 3ZU0A 4MOVA 4I5NC 4TUGA 5IOHA 2Z72A 1OI8A 1IT6A 3P71C 4H1SA 1II7A 4V0VA 1T71A 3PSOA 3AV0A 3T1IA 4UT3A 1FJMA 3K7WC 2WDFA 5GTUA 1NNWA 1S70A 4H2FA 2Z06A 3RL5A 5C1VA 3EGGA 1S95A 3AUZA 4ORCA 4WWLA 2DFJA 1XM7A 1WARA 3FGAC 4IL1A 1W24A 4FBKA 4JA9A 3DSDA 3K7VC 2BQ8X 2HYPA 4ZVZA 2QJCA 3H68A 2KKNA 3LL8A 3DSCA 5J28A 3QFOA 1OIDA 2WDDA 3THNA 1V73A 4KBPA 4OR9A 1QHWA 4HD0A 1OIEA 4H2GA 4MP0A 2R17A 4LACC 3QG5C 1HPUA 1UTEA 3EGHA 4MOYA 3C5WC 2Q8UA 3JYFA 2IAEC 2O8GA 4V0WA 2NPPC 2GJUA 4UT3B 1MF8A 5JPFA 5DNYA 2HYOA 3IVEA 3QFMA 3RL3A 1AUIA 2CV9A 3GVEA 4O43A 4LTYA 3V4YA 2O8AA 2YVTA 4F0ZA 5INBA 4Q7FA 2BDXA 3HVQA 5F3WA 4JA7A 3CK2A 4H2BA 3N5UA 4DT2A 1UF3A 4FBQA 4NZVA 3H62B 4ORAA 3THOB 4M0VA 1S8EA 1HP1A 3E7AA 4XPNA 3DW8C 1HO5A 4O24A 2XMOA 4ZX2A 4FBWA 4J6OA 5JPEA 2JOGA 4UT2A 2A22A 4FCXA 2IE3C 5HPEA 4V0XA 2ZBMA 2HY1A
chains in the Genus database with same CATH superfamily
3ZTVA 1Z2XA 3KBPA 4DSYA 3H63A 2QFPA 3H69A 3QFNA 4IYPC 1KBPA 3C9FA 3IB7A 1S3MA 3H61A 3D03A 4LU9A 2BCDA 1WAO1 4YKEA 1M63A 1U32A 3IB8A 3IVDA 4I5LC 1QFCA 2IE4C 3TGHA 3E7BA 4UWQA 3QFKA 4O5GA 4DHLA 2USHA 5JJTA 4TUIA 5EQVA 5B8IA 2NYLC 1G5BA 3RL4A 4ORBA 3H67A 4G9JA 4H1YP 2Z1AA 1S3LA 1XZWA 3RQZA 1SU1A 4B2OA 4KKZA 2P6BA 1S3NA 2QFRA 3H64A 4H2IA 1JK7A 3H66A 1USHA 2WDEA 2WDCA 2NYMC 1T70A 2NXFA 3PSNA 4O4KA 3H60A 3ICFA 2AHDA 1Z2WA 1TCOA 3ZU0A 4MOVA 4I5NC 4TUGA 5IOHA 2Z72A 1OI8A 1IT6A 3P71C 4H1SA 1II7A 4V0VA 1T71A 3PSOA 3AV0A 2ZO9B 3T1IA 4UT3A 1FJMA 3K7WC 2WDFA 5GTUA 1NNWA 1S70A 2ZOAA 4H2FA 2Z06A 3RL5A 5C1VA 3EGGA 1S95A 3AUZA 4ORCA 4WWLA 2DFJA 1XM7A 1WARA 3FGAC 4IL1A 1W24A 4FBKA 4JA9A 3DSDA 3K7VC 2DXLA 2BQ8X 2HYPA 2YEQA 4ZVZA 2QJCA 3H68A 2KKNA 3LL8A 3DSCA 5J28A 3QFOA 1OIDA 2WDDA 3THNA 1V73A 4KBPA 4OR9A 1QHWA 4HD0A 1OIEA 4H2GA 4MP0A 2R17A 4LACC 3QG5C 1HPUA 1UTEA 2DXNA 3EGHA 4MOYA 3C5WC 2Q8UA 3JYFA 3E0JA 2IAEC 2O8GA 4V0WA 2NPPC 2GJUA 4UT3B 1MF8A 5JPFA 5DNYA 2HYOA 3IVEA 3QFMA 3RL3A 1AUIA 2CV9A 3GVEA 4O43A 4LTYA 3V4YA 2O8AA 2YVTA 4F0ZA 5INBA 4Q7FA 2BDXA 3HVQA 5F3WA 4JA7A 3CK2A 4H2BA 3N5UA 4DT2A 1UF3A 4FBQA 4NZVA 3H62B 4ORAA 3THOB 3FLOA 4M0VA 1S8EA 1HP1A 3E7AA 4XPNA 3DW8C 1HO5A 4O24A 2XMOA 4ZX2A 4FBWA 4J6OA 5JPEA 2JOGA 4UT2A 2A22A 4FCXA 2IE3C 5HPEA 4V0XA 2ZBMA 2HY1A
chains in the Genus database with same CATH topology
3ZTVA 1Z2XA 3KBPA 4DSYA 3H63A 2QFPA 3H69A 3QFNA 4IYPC 1KBPA 3C9FA 3IB7A 1S3MA 3H61A 3D03A 4LU9A 2BCDA 1WAO1 4YKEA 1M63A 1U32A 3IB8A 3IVDA 4I5LC 1QFCA 2IE4C 3TGHA 3E7BA 4UWQA 3QFKA 4O5GA 4DHLA 2USHA 5JJTA 4TUIA 5EQVA 5B8IA 2NYLC 1G5BA 3RL4A 4ORBA 3H67A 4G9JA 4H1YP 2Z1AA 1S3LA 1XZWA 3RQZA 1SU1A 4B2OA 4KKZA 2P6BA 1S3NA 2QFRA 3H64A 4H2IA 1JK7A 3H66A 1USHA 2WDEA 2WDCA 2NYMC 1T70A 2NXFA 3PSNA 4O4KA 3H60A 3ICFA 2AHDA 1Z2WA 1TCOA 3ZU0A 4MOVA 4I5NC 4TUGA 5IOHA 2Z72A 1OI8A 1IT6A 3P71C 4H1SA 1II7A 4V0VA 1T71A 3PSOA 3AV0A 2ZO9B 3T1IA 4UT3A 1FJMA 3K7WC 2WDFA 5GTUA 1NNWA 1S70A 2ZOAA 4H2FA 2Z06A 3RL5A 5C1VA 3EGGA 1S95A 3AUZA 4ORCA 4WWLA 2DFJA 1XM7A 1WARA 3FGAC 4IL1A 1W24A 4FBKA 4JA9A 3DSDA 3K7VC 2DXLA 2BQ8X 2HYPA 2YEQA 4ZVZA 2QJCA 3H68A 2KKNA 3LL8A 3DSCA 5J28A 3QFOA 1OIDA 2WDDA 3THNA 1V73A 4KBPA 4OR9A 1QHWA 4HD0A 1OIEA 4H2GA 4MP0A 2R17A 4LACC 3QG5C 1HPUA 1UTEA 2DXNA 3EGHA 4MOYA 3C5WC 2Q8UA 3JYFA 3E0JA 2IAEC 2O8GA 4V0WA 2NPPC 2GJUA 4UT3B 1MF8A 5JPFA 5DNYA 2HYOA 3IVEA 3QFMA 3RL3A 1AUIA 2CV9A 3GVEA 4O43A 4LTYA 3V4YA 2O8AA 2YVTA 4F0ZA 5INBA 4Q7FA 2BDXA 3HVQA 5F3WA 4JA7A 3CK2A 4H2BA 3N5UA 4DT2A 1UF3A 4FBQA 4NZVA 3H62B 4ORAA 3THOB 3FLOA 4M0VA 1S8EA 1HP1A 3E7AA 4XPNA 3DW8C 1HO5A 4O24A 2XMOA 4ZX2A 4FBWA 4J6OA 5JPEA 2JOGA 4UT2A 2A22A 4FCXA 2IE3C 5HPEA 4V0XA 2ZBMA 2HY1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ZTV A;  1Z2X A;  3KBP A;  4DSY A;  3H63 A;  2QFP A;  3H69 A;  3QFN A;  4IYP C;  1KBP A;  3C9F A;  3IB7 A;  1S3M A;  3H61 A;  4LU9 A;  2BCD A;  1WAO 1;  4YKE A;  1M63 A;  1U32 A;  3IB8 A;  3IVD A;  4I5L C;  1QFC A;  2IE4 C;  3TGH A;  3E7B A;  4UWQ A;  3QFK A;  4O5G A;  4DHL A;  2USH A;  5JJT A;  4TUI A;  5EQV A;  5B8I A;  2NYL C;  1G5B A;  3RL4 A;  4ORB A;  3H67 A;  4G9J A;  4H1Y P;  2Z1A A;  1S3L A;  1XZW A;  3RQZ A;  1SU1 A;  4B2O A;  4KKZ A;  2P6B A;  1S3N A;  2QFR A;  3H64 A;  4H2I A;  1JK7 A;  3H66 A;  1USH A;  2WDE A;  2WDC A;  2NYM C;  1T70 A;  2NXF A;  3PSN A;  4O4K A;  3H60 A;  3ICF A;  2AHD A;  1Z2W A;  1TCO A;  3ZU0 A;  4MOV A;  4I5N C;  4TUG A;  5IOH A;  2Z72 A;  1OI8 A;  1IT6 A;  3P71 C;  4H1S A;  1II7 A;  4V0V A;  1T71 A;  3PSO A;  3AV0 A;  3T1I A;  4UT3 A;  1FJM A;  3K7W C;  2WDF A;  5GTU A;  1NNW A;  1S70 A;  4H2F A;  2Z06 A;  3RL5 A;  5C1V A;  3EGG A;  1S95 A;  3AUZ A;  4ORC A;  4WWL A;  2DFJ A;  1XM7 A;  1WAR A;  3FGA C;  4IL1 A;  1W24 A;  4FBK A;  4JA9 A;  3DSD A;  3K7V C;  2BQ8 X;  2HYP A;  4ZVZ A;  2QJC A;  3H68 A;  2KKN A;  3LL8 A;  3DSC A;  5J28 A;  3QFO A;  1OID A;  2WDD A;  3THN A;  1V73 A;  4KBP A;  4OR9 A;  1QHW A;  4HD0 A;  1OIE A;  4H2G A;  4MP0 A;  2R17 A;  4LAC C;  3QG5 C;  1HPU A;  1UTE A;  3EGH A;  4MOY A;  3C5W C;  2Q8U A;  3JYF A;  2IAE C;  2O8G A;  4V0W A;  2NPP C;  2GJU A;  4UT3 B;  1MF8 A;  5JPF A;  5DNY A;  2HYO A;  3IVE A;  3QFM A;  3RL3 A;  1AUI A;  2CV9 A;  3GVE A;  4O43 A;  4LTY A;  3V4Y A;  2O8A A;  2YVT A;  4F0Z A;  5INB A;  4Q7F A;  2BDX A;  3HVQ A;  5F3W A;  4JA7 A;  3CK2 A;  4H2B A;  3N5U A;  4DT2 A;  1UF3 A;  4FBQ A;  4NZV A;  3H62 B;  4ORA A;  3THO B;  4M0V A;  1S8E A;  1HP1 A;  3E7A A;  4XPN A;  3DW8 C;  1HO5 A;  4O24 A;  2XMO A;  4ZX2 A;  4FBW A;  4J6O A;  5JPE A;  2JOG A;  4UT2 A;  2A22 A;  4FCX A;  2IE3 C;  5HPE A;  4V0X A;  2ZBM A;  2HY1 A; 
#chains in the Genus database with same CATH topology
 3ZTV A;  1Z2X A;  3KBP A;  4DSY A;  3H63 A;  2QFP A;  3H69 A;  3QFN A;  4IYP C;  1KBP A;  3C9F A;  3IB7 A;  1S3M A;  3H61 A;  3D03 A;  4LU9 A;  2BCD A;  1WAO 1;  4YKE A;  1M63 A;  1U32 A;  3IB8 A;  3IVD A;  4I5L C;  1QFC A;  2IE4 C;  3TGH A;  3E7B A;  4UWQ A;  3QFK A;  4O5G A;  4DHL A;  2USH A;  5JJT A;  4TUI A;  5EQV A;  5B8I A;  2NYL C;  1G5B A;  3RL4 A;  4ORB A;  3H67 A;  4G9J A;  4H1Y P;  2Z1A A;  1S3L A;  1XZW A;  3RQZ A;  1SU1 A;  4B2O A;  4KKZ A;  2P6B A;  1S3N A;  2QFR A;  3H64 A;  4H2I A;  1JK7 A;  3H66 A;  1USH A;  2WDE A;  2WDC A;  2NYM C;  1T70 A;  2NXF A;  3PSN A;  4O4K A;  3H60 A;  3ICF A;  2AHD A;  1Z2W A;  1TCO A;  3ZU0 A;  4MOV A;  4I5N C;  4TUG A;  5IOH A;  2Z72 A;  1OI8 A;  1IT6 A;  3P71 C;  4H1S A;  1II7 A;  4V0V A;  1T71 A;  3PSO A;  3AV0 A;  2ZO9 B;  3T1I A;  4UT3 A;  1FJM A;  3K7W C;  2WDF A;  5GTU A;  1NNW A;  1S70 A;  2ZOA A;  4H2F A;  2Z06 A;  3RL5 A;  5C1V A;  3EGG A;  1S95 A;  3AUZ A;  4ORC A;  4WWL A;  2DFJ A;  1XM7 A;  1WAR A;  3FGA C;  4IL1 A;  1W24 A;  4FBK A;  4JA9 A;  3DSD A;  3K7V C;  2DXL A;  2BQ8 X;  2HYP A;  2YEQ A;  4ZVZ A;  2QJC A;  3H68 A;  2KKN A;  3LL8 A;  3DSC A;  5J28 A;  3QFO A;  1OID A;  2WDD A;  3THN A;  1V73 A;  4KBP A;  4OR9 A;  1QHW A;  4HD0 A;  1OIE A;  4H2G A;  4MP0 A;  2R17 A;  4LAC C;  3QG5 C;  1HPU A;  1UTE A;  2DXN A;  3EGH A;  4MOY A;  3C5W C;  2Q8U A;  3JYF A;  3E0J A;  2IAE C;  2O8G A;  4V0W A;  2NPP C;  2GJU A;  4UT3 B;  1MF8 A;  5JPF A;  5DNY A;  2HYO A;  3IVE A;  3QFM A;  3RL3 A;  1AUI A;  2CV9 A;  3GVE A;  4O43 A;  4LTY A;  3V4Y A;  2O8A A;  2YVT A;  4F0Z A;  5INB A;  4Q7F A;  2BDX A;  3HVQ A;  5F3W A;  4JA7 A;  3CK2 A;  4H2B A;  3N5U A;  4DT2 A;  1UF3 A;  4FBQ A;  4NZV A;  3H62 B;  4ORA A;  3THO B;  3FLO A;  4M0V A;  1S8E A;  1HP1 A;  3E7A A;  4XPN A;  3DW8 C;  1HO5 A;  4O24 A;  2XMO A;  4ZX2 A;  4FBW A;  4J6O A;  5JPE A;  2JOG A;  4UT2 A;  2A22 A;  4FCX A;  2IE3 C;  5HPE A;  4V0X A;  2ZBM A;  2HY1 A; 
#chains in the Genus database with same CATH homology
 3ZTV A;  1Z2X A;  3KBP A;  4DSY A;  3H63 A;  2QFP A;  3H69 A;  3QFN A;  4IYP C;  1KBP A;  3C9F A;  3IB7 A;  1S3M A;  3H61 A;  3D03 A;  4LU9 A;  2BCD A;  1WAO 1;  4YKE A;  1M63 A;  1U32 A;  3IB8 A;  3IVD A;  4I5L C;  1QFC A;  2IE4 C;  3TGH A;  3E7B A;  4UWQ A;  3QFK A;  4O5G A;  4DHL A;  2USH A;  5JJT A;  4TUI A;  5EQV A;  5B8I A;  2NYL C;  1G5B A;  3RL4 A;  4ORB A;  3H67 A;  4G9J A;  4H1Y P;  2Z1A A;  1S3L A;  1XZW A;  3RQZ A;  1SU1 A;  4B2O A;  4KKZ A;  2P6B A;  1S3N A;  2QFR A;  3H64 A;  4H2I A;  1JK7 A;  3H66 A;  1USH A;  2WDE A;  2WDC A;  2NYM C;  1T70 A;  2NXF A;  3PSN A;  4O4K A;  3H60 A;  3ICF A;  2AHD A;  1Z2W A;  1TCO A;  3ZU0 A;  4MOV A;  4I5N C;  4TUG A;  5IOH A;  2Z72 A;  1OI8 A;  1IT6 A;  3P71 C;  4H1S A;  1II7 A;  4V0V A;  1T71 A;  3PSO A;  3AV0 A;  2ZO9 B;  3T1I A;  4UT3 A;  1FJM A;  3K7W C;  2WDF A;  5GTU A;  1NNW A;  1S70 A;  2ZOA A;  4H2F A;  2Z06 A;  3RL5 A;  5C1V A;  3EGG A;  1S95 A;  3AUZ A;  4ORC A;  4WWL A;  2DFJ A;  1XM7 A;  1WAR A;  3FGA C;  4IL1 A;  1W24 A;  4FBK A;  4JA9 A;  3DSD A;  3K7V C;  2DXL A;  2BQ8 X;  2HYP A;  2YEQ A;  4ZVZ A;  2QJC A;  3H68 A;  2KKN A;  3LL8 A;  3DSC A;  5J28 A;  3QFO A;  1OID A;  2WDD A;  3THN A;  1V73 A;  4KBP A;  4OR9 A;  1QHW A;  4HD0 A;  1OIE A;  4H2G A;  4MP0 A;  2R17 A;  4LAC C;  3QG5 C;  1HPU A;  1UTE A;  2DXN A;  3EGH A;  4MOY A;  3C5W C;  2Q8U A;  3JYF A;  3E0J A;  2IAE C;  2O8G A;  4V0W A;  2NPP C;  2GJU A;  4UT3 B;  1MF8 A;  5JPF A;  5DNY A;  2HYO A;  3IVE A;  3QFM A;  3RL3 A;  1AUI A;  2CV9 A;  3GVE A;  4O43 A;  4LTY A;  3V4Y A;  2O8A A;  2YVT A;  4F0Z A;  5INB A;  4Q7F A;  2BDX A;  3HVQ A;  5F3W A;  4JA7 A;  3CK2 A;  4H2B A;  3N5U A;  4DT2 A;  1UF3 A;  4FBQ A;  4NZV A;  3H62 B;  4ORA A;  3THO B;  3FLO A;  4M0V A;  1S8E A;  1HP1 A;  3E7A A;  4XPN A;  3DW8 C;  1HO5 A;  4O24 A;  2XMO A;  4ZX2 A;  4FBW A;  4J6O A;  5JPE A;  2JOG A;  4UT2 A;  2A22 A;  4FCX A;  2IE3 C;  5HPE A;  4V0X A;  2ZBM A;  2HY1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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