3FGAC

Structural basis of pp2a and sgo interaction
Total Genus 99
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
99
sequence length
308
structure length
303
Chain Sequence
DEKVFTKELDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPRRTRRTPDYFL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/hydrolase inhibitor
source organism Mus musculus
publication title Structure and function of the PP2A-shugoshin interaction
pubmed doi rcsb
molecule keywords Serine/threonine-protein phosphatase 2A 65 kDa regulatory su
total genus 99
structure length 303
sequence length 308
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2008-12-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3fgaC00
4O43A 1S3NA 4UT2A 3KBPA 3C9FA 4I5LC 3RL5A 2O8AA 1USHA 3H66A 1WARA 1G5BA 1S3MA 5INBA 1OIEA 3EGGA 1FJMA 2IE4C 2AHDA 3H68A 4B2OA 1T71A 2CV9A 3QFMA 1NNWA 4XPNA 4H2FA 2GJUA 4Q7FA 4ZX2A 3PSNA 3IB7A 4MOYA 3K7VC 3TGHA 4IYPC 2BDXA 4UT3A 1SU1A 5DNYA 3DSCA 1OI8A 3FGAC 3H61A 4FBKA 2ZBMA 2QFRA 5GTUA 4DSYA 4TUGA 4I5NC 2HYPA 1U32A 4H2BA 1W24A 2P6BA 4H2GA 4MOVA 1QFCA 3H64A 4FBWA 4V0VA 2IE3C 4ZVZA 1TCOA 1XM7A 1UF3A 4TUIA 2Z1AA 4G9JA 3ZU0A 3IVDA 3K7WC 4NZVA 3T1IA 1HP1A 4UWQA 1S70A 3H60A 3PSOA 3CK2A 5IOHA 2XMOA 4JA7A 5HPEA 2DFJA 3QFKA 3LL8A 1KBPA 3IB8A 5JPFA 2BQ8X 5J28A 2HY1A 2WDFA 4YKEA 4V0WA 3THOB 3QFNA 2Q8UA 4DT2A 4ORAA 3EGHA 1HPUA 4FCXA 3E7AA 1IT6A 2A22A 3E7BA 3RL4A 4O5GA 4O4KA 2Z06A 1MF8A 5JJTA 4KKZA 1Z2WA 4ORCA 4V0XA 2IAEC 2YVTA 3C5WC 3HVQA 4MP0A 3H62B 3AV0A 3QFOA 4O24A 1AUIA 4OR9A 3N5UA 3THNA 4H1SA 2QJCA 2NYLC 2WDDA 4HD0A 1T70A 4DHLA 4FBQA 1UTEA 2Z72A 3GVEA 3AUZA 1S95A 1S8EA 3H67A 1HO5A 3ICFA 3QG5C 1WAO1 3H69A 4H2IA 3P71C 4KBPA 2WDCA 2NYMC 4WWLA 4IL1A 3RQZA 1QHWA 1M63A 5EQVA 1V73A 2USHA 3V4YA 2BCDA 4JA9A 4LTYA 2QFPA 5B8IA 2KKNA 2NPPC 2O8GA 4UT3B 5JPEA 1S3LA 4J6OA 4M0VA 3DW8C 4ORBA 4LACC 3DSDA 4H1YP 5C1VA 1II7A 2HYOA 1OIDA 3RL3A 1Z2XA 5F3WA 2JOGA 2NXFA 4F0ZA 3JYFA 3ZTVA 2R17A 1JK7A 3H63A 1XZWA 4LU9A 3IVEA 2WDEA
chains in the Genus database with same CATH superfamily
4O43A 1S3NA 4UT2A 3KBPA 3C9FA 4I5LC 3RL5A 2O8AA 1USHA 3H66A 1WARA 1G5BA 1S3MA 5INBA 1OIEA 3EGGA 1FJMA 2ZO9B 2IE4C 2DXLA 2AHDA 3H68A 4B2OA 1T71A 2CV9A 3QFMA 1NNWA 4XPNA 4H2FA 2GJUA 4Q7FA 4ZX2A 3PSNA 2YEQA 3IB7A 4MOYA 3K7VC 3TGHA 4IYPC 3E0JA 2BDXA 4UT3A 1SU1A 5DNYA 3DSCA 1OI8A 3FGAC 3H61A 4FBKA 2ZBMA 2QFRA 5GTUA 4DSYA 4TUGA 4I5NC 2HYPA 1U32A 4H2BA 1W24A 2P6BA 4H2GA 4MOVA 1QFCA 3H64A 4FBWA 4V0VA 2IE3C 4ZVZA 1TCOA 1XM7A 1UF3A 4TUIA 2Z1AA 4G9JA 3ZU0A 3IVDA 3K7WC 4NZVA 3T1IA 1HP1A 4UWQA 2DXNA 1S70A 3H60A 3PSOA 3CK2A 5IOHA 2XMOA 4JA7A 5HPEA 2DFJA 3QFKA 3LL8A 1KBPA 3IB8A 5JPFA 2BQ8X 5J28A 2HY1A 2WDFA 4YKEA 4V0WA 3THOB 3QFNA 2Q8UA 4DT2A 4ORAA 3EGHA 1HPUA 4FCXA 3E7AA 1IT6A 2A22A 3E7BA 3RL4A 4O5GA 4O4KA 2Z06A 1MF8A 5JJTA 4KKZA 1Z2WA 4ORCA 4V0XA 2IAEC 2YVTA 3C5WC 3HVQA 4MP0A 3H62B 3AV0A 3QFOA 4O24A 1AUIA 4OR9A 3N5UA 3THNA 4H1SA 2QJCA 2NYLC 2WDDA 4HD0A 1T70A 4DHLA 4FBQA 1UTEA 2Z72A 3GVEA 3AUZA 1S95A 1S8EA 3H67A 1HO5A 3ICFA 3QG5C 1WAO1 3H69A 4H2IA 2ZOAA 3P71C 3FLOA 4KBPA 2WDCA 2NYMC 4WWLA 4IL1A 3RQZA 1QHWA 1M63A 5EQVA 1V73A 2USHA 3V4YA 2BCDA 4JA9A 4LTYA 2QFPA 5B8IA 2KKNA 2NPPC 2O8GA 4UT3B 5JPEA 1S3LA 4J6OA 4M0VA 3DW8C 4ORBA 4LACC 3DSDA 4H1YP 5C1VA 1II7A 3D03A 2HYOA 1OIDA 3RL3A 1Z2XA 5F3WA 2JOGA 2NXFA 4F0ZA 3JYFA 3ZTVA 2R17A 1JK7A 3H63A 1XZWA 4LU9A 3IVEA 2WDEA
chains in the Genus database with same CATH topology
4O43A 1S3NA 4UT2A 3KBPA 3C9FA 4I5LC 3RL5A 2O8AA 1USHA 3H66A 1WARA 1G5BA 1S3MA 5INBA 1OIEA 3EGGA 1FJMA 2ZO9B 2IE4C 2DXLA 2AHDA 3H68A 4B2OA 1T71A 2CV9A 3QFMA 1NNWA 4XPNA 4H2FA 2GJUA 4Q7FA 4ZX2A 3PSNA 2YEQA 3IB7A 4MOYA 3K7VC 3TGHA 4IYPC 3E0JA 2BDXA 4UT3A 1SU1A 5DNYA 3DSCA 1OI8A 3FGAC 3H61A 4FBKA 2ZBMA 2QFRA 5GTUA 4DSYA 4TUGA 4I5NC 2HYPA 1U32A 4H2BA 1W24A 2P6BA 4H2GA 4MOVA 1QFCA 3H64A 4FBWA 4V0VA 2IE3C 4ZVZA 1TCOA 1XM7A 1UF3A 4TUIA 2Z1AA 4G9JA 3ZU0A 3IVDA 3K7WC 4NZVA 3T1IA 1HP1A 4UWQA 2DXNA 1S70A 3H60A 3PSOA 3CK2A 5IOHA 2XMOA 4JA7A 5HPEA 2DFJA 3QFKA 3LL8A 1KBPA 3IB8A 5JPFA 2BQ8X 5J28A 2HY1A 2WDFA 4YKEA 4V0WA 3THOB 3QFNA 2Q8UA 4DT2A 4ORAA 3EGHA 1HPUA 4FCXA 3E7AA 1IT6A 2A22A 3E7BA 3RL4A 4O5GA 4O4KA 2Z06A 1MF8A 5JJTA 4KKZA 1Z2WA 4ORCA 4V0XA 2IAEC 2YVTA 3C5WC 3HVQA 4MP0A 3H62B 3AV0A 3QFOA 4O24A 1AUIA 4OR9A 3N5UA 3THNA 4H1SA 2QJCA 2NYLC 2WDDA 4HD0A 1T70A 4DHLA 4FBQA 1UTEA 2Z72A 3GVEA 3AUZA 1S95A 1S8EA 3H67A 1HO5A 3ICFA 3QG5C 1WAO1 3H69A 4H2IA 2ZOAA 3P71C 3FLOA 4KBPA 2WDCA 2NYMC 4WWLA 4IL1A 3RQZA 1QHWA 1M63A 5EQVA 1V73A 2USHA 3V4YA 2BCDA 4JA9A 4LTYA 2QFPA 5B8IA 2KKNA 2NPPC 2O8GA 4UT3B 5JPEA 1S3LA 4J6OA 4M0VA 3DW8C 4ORBA 4LACC 3DSDA 4H1YP 5C1VA 1II7A 3D03A 2HYOA 1OIDA 3RL3A 1Z2XA 5F3WA 2JOGA 2NXFA 4F0ZA 3JYFA 3ZTVA 2R17A 1JK7A 3H63A 1XZWA 4LU9A 3IVEA 2WDEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4O43 A;  1S3N A;  4UT2 A;  3KBP A;  3C9F A;  4I5L C;  3RL5 A;  2O8A A;  1USH A;  3H66 A;  1WAR A;  1G5B A;  1S3M A;  5INB A;  1OIE A;  3EGG A;  1FJM A;  2IE4 C;  2AHD A;  3H68 A;  4B2O A;  1T71 A;  2CV9 A;  3QFM A;  1NNW A;  4XPN A;  4H2F A;  2GJU A;  4Q7F A;  4ZX2 A;  3PSN A;  3IB7 A;  4MOY A;  3K7V C;  3TGH A;  4IYP C;  2BDX A;  4UT3 A;  1SU1 A;  5DNY A;  3DSC A;  1OI8 A;  3FGA C;  3H61 A;  4FBK A;  2ZBM A;  2QFR A;  5GTU A;  4DSY A;  4TUG A;  4I5N C;  2HYP A;  1U32 A;  4H2B A;  1W24 A;  2P6B A;  4H2G A;  4MOV A;  1QFC A;  3H64 A;  4FBW A;  4V0V A;  2IE3 C;  4ZVZ A;  1TCO A;  1XM7 A;  1UF3 A;  4TUI A;  2Z1A A;  4G9J A;  3ZU0 A;  3IVD A;  3K7W C;  4NZV A;  3T1I A;  1HP1 A;  4UWQ A;  1S70 A;  3H60 A;  3PSO A;  3CK2 A;  5IOH A;  2XMO A;  4JA7 A;  5HPE A;  2DFJ A;  3QFK A;  3LL8 A;  1KBP A;  3IB8 A;  5JPF A;  2BQ8 X;  5J28 A;  2HY1 A;  2WDF A;  4YKE A;  4V0W A;  3THO B;  3QFN A;  2Q8U A;  4DT2 A;  4ORA A;  3EGH A;  1HPU A;  4FCX A;  3E7A A;  1IT6 A;  2A22 A;  3E7B A;  3RL4 A;  4O5G A;  4O4K A;  2Z06 A;  1MF8 A;  5JJT A;  4KKZ A;  1Z2W A;  4ORC A;  4V0X A;  2IAE C;  2YVT A;  3C5W C;  3HVQ A;  4MP0 A;  3H62 B;  3AV0 A;  3QFO A;  4O24 A;  1AUI A;  4OR9 A;  3N5U A;  3THN A;  4H1S A;  2QJC A;  2NYL C;  2WDD A;  4HD0 A;  1T70 A;  4DHL A;  4FBQ A;  1UTE A;  2Z72 A;  3GVE A;  3AUZ A;  1S95 A;  1S8E A;  3H67 A;  1HO5 A;  3ICF A;  3QG5 C;  1WAO 1;  3H69 A;  4H2I A;  3P71 C;  4KBP A;  2WDC A;  2NYM C;  4WWL A;  4IL1 A;  3RQZ A;  1QHW A;  1M63 A;  5EQV A;  1V73 A;  2USH A;  3V4Y A;  2BCD A;  4JA9 A;  4LTY A;  2QFP A;  5B8I A;  2KKN A;  2NPP C;  2O8G A;  4UT3 B;  5JPE A;  1S3L A;  4J6O A;  4M0V A;  3DW8 C;  4ORB A;  4LAC C;  3DSD A;  4H1Y P;  5C1V A;  1II7 A;  2HYO A;  1OID A;  3RL3 A;  1Z2X A;  5F3W A;  2JOG A;  2NXF A;  4F0Z A;  3JYF A;  3ZTV A;  2R17 A;  1JK7 A;  3H63 A;  1XZW A;  4LU9 A;  3IVE A;  2WDE A; 
#chains in the Genus database with same CATH topology
 4O43 A;  1S3N A;  4UT2 A;  3KBP A;  3C9F A;  4I5L C;  3RL5 A;  2O8A A;  1USH A;  3H66 A;  1WAR A;  1G5B A;  1S3M A;  5INB A;  1OIE A;  3EGG A;  1FJM A;  2ZO9 B;  2IE4 C;  2DXL A;  2AHD A;  3H68 A;  4B2O A;  1T71 A;  2CV9 A;  3QFM A;  1NNW A;  4XPN A;  4H2F A;  2GJU A;  4Q7F A;  4ZX2 A;  3PSN A;  2YEQ A;  3IB7 A;  4MOY A;  3K7V C;  3TGH A;  4IYP C;  3E0J A;  2BDX A;  4UT3 A;  1SU1 A;  5DNY A;  3DSC A;  1OI8 A;  3FGA C;  3H61 A;  4FBK A;  2ZBM A;  2QFR A;  5GTU A;  4DSY A;  4TUG A;  4I5N C;  2HYP A;  1U32 A;  4H2B A;  1W24 A;  2P6B A;  4H2G A;  4MOV A;  1QFC A;  3H64 A;  4FBW A;  4V0V A;  2IE3 C;  4ZVZ A;  1TCO A;  1XM7 A;  1UF3 A;  4TUI A;  2Z1A A;  4G9J A;  3ZU0 A;  3IVD A;  3K7W C;  4NZV A;  3T1I A;  1HP1 A;  4UWQ A;  2DXN A;  1S70 A;  3H60 A;  3PSO A;  3CK2 A;  5IOH A;  2XMO A;  4JA7 A;  5HPE A;  2DFJ A;  3QFK A;  3LL8 A;  1KBP A;  3IB8 A;  5JPF A;  2BQ8 X;  5J28 A;  2HY1 A;  2WDF A;  4YKE A;  4V0W A;  3THO B;  3QFN A;  2Q8U A;  4DT2 A;  4ORA A;  3EGH A;  1HPU A;  4FCX A;  3E7A A;  1IT6 A;  2A22 A;  3E7B A;  3RL4 A;  4O5G A;  4O4K A;  2Z06 A;  1MF8 A;  5JJT A;  4KKZ A;  1Z2W A;  4ORC A;  4V0X A;  2IAE C;  2YVT A;  3C5W C;  3HVQ A;  4MP0 A;  3H62 B;  3AV0 A;  3QFO A;  4O24 A;  1AUI A;  4OR9 A;  3N5U A;  3THN A;  4H1S A;  2QJC A;  2NYL C;  2WDD A;  4HD0 A;  1T70 A;  4DHL A;  4FBQ A;  1UTE A;  2Z72 A;  3GVE A;  3AUZ A;  1S95 A;  1S8E A;  3H67 A;  1HO5 A;  3ICF A;  3QG5 C;  1WAO 1;  3H69 A;  4H2I A;  2ZOA A;  3P71 C;  3FLO A;  4KBP A;  2WDC A;  2NYM C;  4WWL A;  4IL1 A;  3RQZ A;  1QHW A;  1M63 A;  5EQV A;  1V73 A;  2USH A;  3V4Y A;  2BCD A;  4JA9 A;  4LTY A;  2QFP A;  5B8I A;  2KKN A;  2NPP C;  2O8G A;  4UT3 B;  5JPE A;  1S3L A;  4J6O A;  4M0V A;  3DW8 C;  4ORB A;  4LAC C;  3DSD A;  4H1Y P;  5C1V A;  1II7 A;  3D03 A;  2HYO A;  1OID A;  3RL3 A;  1Z2X A;  5F3W A;  2JOG A;  2NXF A;  4F0Z A;  3JYF A;  3ZTV A;  2R17 A;  1JK7 A;  3H63 A;  1XZW A;  4LU9 A;  3IVE A;  2WDE A; 
#chains in the Genus database with same CATH homology
 4O43 A;  1S3N A;  4UT2 A;  3KBP A;  3C9F A;  4I5L C;  3RL5 A;  2O8A A;  1USH A;  3H66 A;  1WAR A;  1G5B A;  1S3M A;  5INB A;  1OIE A;  3EGG A;  1FJM A;  2ZO9 B;  2IE4 C;  2DXL A;  2AHD A;  3H68 A;  4B2O A;  1T71 A;  2CV9 A;  3QFM A;  1NNW A;  4XPN A;  4H2F A;  2GJU A;  4Q7F A;  4ZX2 A;  3PSN A;  2YEQ A;  3IB7 A;  4MOY A;  3K7V C;  3TGH A;  4IYP C;  3E0J A;  2BDX A;  4UT3 A;  1SU1 A;  5DNY A;  3DSC A;  1OI8 A;  3FGA C;  3H61 A;  4FBK A;  2ZBM A;  2QFR A;  5GTU A;  4DSY A;  4TUG A;  4I5N C;  2HYP A;  1U32 A;  4H2B A;  1W24 A;  2P6B A;  4H2G A;  4MOV A;  1QFC A;  3H64 A;  4FBW A;  4V0V A;  2IE3 C;  4ZVZ A;  1TCO A;  1XM7 A;  1UF3 A;  4TUI A;  2Z1A A;  4G9J A;  3ZU0 A;  3IVD A;  3K7W C;  4NZV A;  3T1I A;  1HP1 A;  4UWQ A;  2DXN A;  1S70 A;  3H60 A;  3PSO A;  3CK2 A;  5IOH A;  2XMO A;  4JA7 A;  5HPE A;  2DFJ A;  3QFK A;  3LL8 A;  1KBP A;  3IB8 A;  5JPF A;  2BQ8 X;  5J28 A;  2HY1 A;  2WDF A;  4YKE A;  4V0W A;  3THO B;  3QFN A;  2Q8U A;  4DT2 A;  4ORA A;  3EGH A;  1HPU A;  4FCX A;  3E7A A;  1IT6 A;  2A22 A;  3E7B A;  3RL4 A;  4O5G A;  4O4K A;  2Z06 A;  1MF8 A;  5JJT A;  4KKZ A;  1Z2W A;  4ORC A;  4V0X A;  2IAE C;  2YVT A;  3C5W C;  3HVQ A;  4MP0 A;  3H62 B;  3AV0 A;  3QFO A;  4O24 A;  1AUI A;  4OR9 A;  3N5U A;  3THN A;  4H1S A;  2QJC A;  2NYL C;  2WDD A;  4HD0 A;  1T70 A;  4DHL A;  4FBQ A;  1UTE A;  2Z72 A;  3GVE A;  3AUZ A;  1S95 A;  1S8E A;  3H67 A;  1HO5 A;  3ICF A;  3QG5 C;  1WAO 1;  3H69 A;  4H2I A;  2ZOA A;  3P71 C;  3FLO A;  4KBP A;  2WDC A;  2NYM C;  4WWL A;  4IL1 A;  3RQZ A;  1QHW A;  1M63 A;  5EQV A;  1V73 A;  2USH A;  3V4Y A;  2BCD A;  4JA9 A;  4LTY A;  2QFP A;  5B8I A;  2KKN A;  2NPP C;  2O8G A;  4UT3 B;  5JPE A;  1S3L A;  4J6O A;  4M0V A;  3DW8 C;  4ORB A;  4LAC C;  3DSD A;  4H1Y P;  5C1V A;  1II7 A;  3D03 A;  2HYO A;  1OID A;  3RL3 A;  1Z2X A;  5F3W A;  2JOG A;  2NXF A;  4F0Z A;  3JYF A;  3ZTV A;  2R17 A;  1JK7 A;  3H63 A;  1XZW A;  4LU9 A;  3IVE A;  2WDE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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