5J28A

Ki67-pp1g (protein phosphatase 1, gamma isoform) holoenzyme complex
Total Genus 106
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
106
sequence length
293
structure length
293
Chain Sequence
LNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase/protein binding
source organism Homo sapiens
publication title The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism.
pubmed doi rcsb
molecule keywords Serine/threonine-protein phosphatase PP1-gamma catalytic sub
total genus 106
structure length 293
sequence length 293
chains with identical sequence B
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2016-03-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF16891 STPPase_N Serine-threonine protein phosphatase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 5j28A00
4UWQA 2WDCA 1Z2XA 4DHLA 2KKNA 3QFMA 4J6OA 4ORAA 3AUZA 2HY1A 3H62B 3IVEA 3IVDA 4I5NC 3EGGA 4H2GA 4JA9A 4DT2A 4V0VA 3GVEA 1S8EA 4MOVA 3E7BA 4UT3A 4LACC 4M0VA 1S3NA 2IE4C 2HYPA 1V73A 1G5BA 2XMOA 2QFRA 5J28A 4YKEA 4MOYA 4O43A 4FBQA 1WARA 1U32A 4IL1A 4LU9A 4IYPC 4JA7A 2YVTA 4KKZA 5JJTA 3ZU0A 4MP0A 1M63A 3K7VC 3FGAC 5C1VA 1IT6A 3H64A 4ORCA 3THNA 1W24A 3H61A 2JOGA 4H1YP 3EGHA 2Z72A 3H63A 2AHDA 4LTYA 3RL4A 2Q8UA 4H2FA 4ZX2A 4FBWA 4XPNA 3H67A 3IB7A 1Z2WA 3ICFA 5B8IA 3IB8A 1NNWA 5IOHA 3K7WC 4FBKA 3HVQA 4B2OA 1OIDA 4DSYA 3N5UA 3LL8A 2QFPA 1OIEA 4NZVA 4O5GA 3JYFA 2WDDA 2NPPC 5HPEA 5JPFA 4H2IA 1UF3A 3PSOA 4I5LC 1OI8A 1S3LA 1S95A 1KBPA 1HO5A 1FJMA 3DW8C 2Z06A 3C9FA 4OR9A 3QFKA 4KBPA 3H68A 2WDFA 1MF8A 1UTEA 3AV0A 3T1IA 4UT2A 2DFJA 2BQ8X 1WAO1 1SU1A 2NYMC 5F3WA 3P71C 3TGHA 1HP1A 3QFNA 5DNYA 2ZBMA 4ZVZA 4Q7FA 2R17A 2O8AA 2QJCA 4H1SA 4HD0A 3DSDA 2P6BA 4TUIA 3H69A 2O8GA 3QFOA 1QFCA 4F0ZA 1II7A 4UT3B 4O24A 5GTUA 3DSCA 1HPUA 3PSNA 2Z1AA 3RL5A 2GJUA 3QG5C 3CK2A 5JPEA 3H66A 4TUGA 3V4YA 1AUIA 3E7AA 1S70A 2BCDA 3RQZA 4G9JA 4WWLA 1JK7A 4V0XA 4FCXA 2A22A 1XZWA 2BDXA 1T71A 2HYOA 2IE3C 3RL3A 2USHA 2CV9A 3H60A 1USHA 1S3MA 5EQVA 2IAEC 3KBPA 1XM7A 3C5WC 2NYLC 5INBA 2WDEA 4H2BA 4V0WA 2NXFA 4ORBA 1T70A 3THOB 4O4KA 3ZTVA 1QHWA 1TCOA
chains in the Genus database with same CATH superfamily
4UWQA 2WDCA 1Z2XA 4DHLA 2KKNA 3QFMA 4J6OA 4ORAA 3AUZA 2HY1A 3H62B 3IVEA 3IVDA 4I5NC 3EGGA 4H2GA 4JA9A 4DT2A 4V0VA 3GVEA 1S8EA 4MOVA 3E7BA 4UT3A 4LACC 4M0VA 1S3NA 2IE4C 2HYPA 1V73A 1G5BA 2XMOA 2QFRA 5J28A 4YKEA 4MOYA 4O43A 4FBQA 1WARA 1U32A 4IL1A 4LU9A 2DXLA 4IYPC 4JA7A 2YVTA 4KKZA 5JJTA 3ZU0A 4MP0A 1M63A 3FLOA 3K7VC 3FGAC 5C1VA 1IT6A 3H64A 4ORCA 2YEQA 3THNA 1W24A 3H61A 2JOGA 4H1YP 3EGHA 2Z72A 3H63A 2AHDA 4LTYA 3RL4A 2Q8UA 4H2FA 4ZX2A 4FBWA 4XPNA 3H67A 3IB7A 1Z2WA 3ICFA 5B8IA 3IB8A 1NNWA 5IOHA 3K7WC 4FBKA 3HVQA 4B2OA 1OIDA 4DSYA 3N5UA 3LL8A 2QFPA 1OIEA 4NZVA 4O5GA 3JYFA 2WDDA 2NPPC 2ZO9B 5HPEA 5JPFA 4H2IA 1UF3A 3PSOA 4I5LC 1OI8A 1S3LA 1S95A 1KBPA 1HO5A 1FJMA 3DW8C 2Z06A 3C9FA 4OR9A 3QFKA 4KBPA 3H68A 2WDFA 1MF8A 1UTEA 3AV0A 3T1IA 4UT2A 2DFJA 2BQ8X 1WAO1 1SU1A 2NYMC 5F3WA 3P71C 3TGHA 1HP1A 3QFNA 5DNYA 2ZBMA 4ZVZA 4Q7FA 2R17A 2O8AA 2QJCA 4H1SA 4HD0A 2ZOAA 3DSDA 2P6BA 4TUIA 3H69A 2O8GA 3QFOA 1QFCA 4F0ZA 1II7A 4UT3B 4O24A 5GTUA 3DSCA 1HPUA 3PSNA 2Z1AA 3RL5A 2GJUA 3QG5C 3CK2A 5JPEA 3H66A 4TUGA 3V4YA 1AUIA 3E7AA 1S70A 2BCDA 3RQZA 4G9JA 4WWLA 1JK7A 4V0XA 4FCXA 2A22A 1XZWA 2BDXA 1T71A 2HYOA 2IE3C 3RL3A 2USHA 2CV9A 3H60A 3D03A 1USHA 1S3MA 5EQVA 2IAEC 3KBPA 1XM7A 3C5WC 2NYLC 5INBA 2WDEA 2DXNA 4H2BA 3E0JA 4V0WA 2NXFA 4ORBA 1T70A 3THOB 4O4KA 3ZTVA 1QHWA 1TCOA
chains in the Genus database with same CATH topology
4UWQA 2WDCA 1Z2XA 4DHLA 2KKNA 3QFMA 4J6OA 4ORAA 3AUZA 2HY1A 3H62B 3IVEA 3IVDA 4I5NC 3EGGA 4H2GA 4JA9A 4DT2A 4V0VA 3GVEA 1S8EA 4MOVA 3E7BA 4UT3A 4LACC 4M0VA 1S3NA 2IE4C 2HYPA 1V73A 1G5BA 2XMOA 2QFRA 5J28A 4YKEA 4MOYA 4O43A 4FBQA 1WARA 1U32A 4IL1A 4LU9A 2DXLA 4IYPC 4JA7A 2YVTA 4KKZA 5JJTA 3ZU0A 4MP0A 1M63A 3FLOA 3K7VC 3FGAC 5C1VA 1IT6A 3H64A 4ORCA 2YEQA 3THNA 1W24A 3H61A 2JOGA 4H1YP 3EGHA 2Z72A 3H63A 2AHDA 4LTYA 3RL4A 2Q8UA 4H2FA 4ZX2A 4FBWA 4XPNA 3H67A 3IB7A 1Z2WA 3ICFA 5B8IA 3IB8A 1NNWA 5IOHA 3K7WC 4FBKA 3HVQA 4B2OA 1OIDA 4DSYA 3N5UA 3LL8A 2QFPA 1OIEA 4NZVA 4O5GA 3JYFA 2WDDA 2NPPC 2ZO9B 5HPEA 5JPFA 4H2IA 1UF3A 3PSOA 4I5LC 1OI8A 1S3LA 1S95A 1KBPA 1HO5A 1FJMA 3DW8C 2Z06A 3C9FA 4OR9A 3QFKA 4KBPA 3H68A 2WDFA 1MF8A 1UTEA 3AV0A 3T1IA 4UT2A 2DFJA 2BQ8X 1WAO1 1SU1A 2NYMC 5F3WA 3P71C 3TGHA 1HP1A 3QFNA 5DNYA 2ZBMA 4ZVZA 4Q7FA 2R17A 2O8AA 2QJCA 4H1SA 4HD0A 2ZOAA 3DSDA 2P6BA 4TUIA 3H69A 2O8GA 3QFOA 1QFCA 4F0ZA 1II7A 4UT3B 4O24A 5GTUA 3DSCA 1HPUA 3PSNA 2Z1AA 3RL5A 2GJUA 3QG5C 3CK2A 5JPEA 3H66A 4TUGA 3V4YA 1AUIA 3E7AA 1S70A 2BCDA 3RQZA 4G9JA 4WWLA 1JK7A 4V0XA 4FCXA 2A22A 1XZWA 2BDXA 1T71A 2HYOA 2IE3C 3RL3A 2USHA 2CV9A 3H60A 3D03A 1USHA 1S3MA 5EQVA 2IAEC 3KBPA 1XM7A 3C5WC 2NYLC 5INBA 2WDEA 2DXNA 4H2BA 3E0JA 4V0WA 2NXFA 4ORBA 1T70A 3THOB 4O4KA 3ZTVA 1QHWA 1TCOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UWQ A;  2WDC A;  1Z2X A;  4DHL A;  2KKN A;  3QFM A;  4J6O A;  4ORA A;  3AUZ A;  2HY1 A;  3H62 B;  3IVE A;  3IVD A;  4I5N C;  3EGG A;  4H2G A;  4JA9 A;  4DT2 A;  4V0V A;  3GVE A;  1S8E A;  4MOV A;  3E7B A;  4UT3 A;  4LAC C;  4M0V A;  1S3N A;  2IE4 C;  2HYP A;  1V73 A;  1G5B A;  2XMO A;  2QFR A;  5J28 A;  4YKE A;  4MOY A;  4O43 A;  4FBQ A;  1WAR A;  1U32 A;  4IL1 A;  4LU9 A;  4IYP C;  4JA7 A;  2YVT A;  4KKZ A;  5JJT A;  3ZU0 A;  4MP0 A;  1M63 A;  3K7V C;  3FGA C;  5C1V A;  1IT6 A;  3H64 A;  4ORC A;  3THN A;  1W24 A;  3H61 A;  2JOG A;  4H1Y P;  3EGH A;  2Z72 A;  3H63 A;  2AHD A;  4LTY A;  3RL4 A;  2Q8U A;  4H2F A;  4ZX2 A;  4FBW A;  4XPN A;  3H67 A;  3IB7 A;  1Z2W A;  3ICF A;  5B8I A;  3IB8 A;  1NNW A;  5IOH A;  3K7W C;  4FBK A;  3HVQ A;  4B2O A;  1OID A;  4DSY A;  3N5U A;  3LL8 A;  2QFP A;  1OIE A;  4NZV A;  4O5G A;  3JYF A;  2WDD A;  2NPP C;  5HPE A;  5JPF A;  4H2I A;  1UF3 A;  3PSO A;  4I5L C;  1OI8 A;  1S3L A;  1S95 A;  1KBP A;  1HO5 A;  1FJM A;  3DW8 C;  2Z06 A;  3C9F A;  4OR9 A;  3QFK A;  4KBP A;  3H68 A;  2WDF A;  1MF8 A;  1UTE A;  3AV0 A;  3T1I A;  4UT2 A;  2DFJ A;  2BQ8 X;  1WAO 1;  1SU1 A;  2NYM C;  5F3W A;  3P71 C;  3TGH A;  1HP1 A;  3QFN A;  5DNY A;  2ZBM A;  4ZVZ A;  4Q7F A;  2R17 A;  2O8A A;  2QJC A;  4H1S A;  4HD0 A;  3DSD A;  2P6B A;  4TUI A;  3H69 A;  2O8G A;  3QFO A;  1QFC A;  4F0Z A;  1II7 A;  4UT3 B;  4O24 A;  5GTU A;  3DSC A;  1HPU A;  3PSN A;  2Z1A A;  3RL5 A;  2GJU A;  3QG5 C;  3CK2 A;  5JPE A;  3H66 A;  4TUG A;  3V4Y A;  1AUI A;  3E7A A;  1S70 A;  2BCD A;  3RQZ A;  4G9J A;  4WWL A;  1JK7 A;  4V0X A;  4FCX A;  2A22 A;  1XZW A;  2BDX A;  1T71 A;  2HYO A;  2IE3 C;  3RL3 A;  2USH A;  2CV9 A;  3H60 A;  1USH A;  1S3M A;  5EQV A;  2IAE C;  3KBP A;  1XM7 A;  3C5W C;  2NYL C;  5INB A;  2WDE A;  4H2B A;  4V0W A;  2NXF A;  4ORB A;  1T70 A;  3THO B;  4O4K A;  3ZTV A;  1QHW A;  1TCO A; 
#chains in the Genus database with same CATH topology
 4UWQ A;  2WDC A;  1Z2X A;  4DHL A;  2KKN A;  3QFM A;  4J6O A;  4ORA A;  3AUZ A;  2HY1 A;  3H62 B;  3IVE A;  3IVD A;  4I5N C;  3EGG A;  4H2G A;  4JA9 A;  4DT2 A;  4V0V A;  3GVE A;  1S8E A;  4MOV A;  3E7B A;  4UT3 A;  4LAC C;  4M0V A;  1S3N A;  2IE4 C;  2HYP A;  1V73 A;  1G5B A;  2XMO A;  2QFR A;  5J28 A;  4YKE A;  4MOY A;  4O43 A;  4FBQ A;  1WAR A;  1U32 A;  4IL1 A;  4LU9 A;  2DXL A;  4IYP C;  4JA7 A;  2YVT A;  4KKZ A;  5JJT A;  3ZU0 A;  4MP0 A;  1M63 A;  3FLO A;  3K7V C;  3FGA C;  5C1V A;  1IT6 A;  3H64 A;  4ORC A;  2YEQ A;  3THN A;  1W24 A;  3H61 A;  2JOG A;  4H1Y P;  3EGH A;  2Z72 A;  3H63 A;  2AHD A;  4LTY A;  3RL4 A;  2Q8U A;  4H2F A;  4ZX2 A;  4FBW A;  4XPN A;  3H67 A;  3IB7 A;  1Z2W A;  3ICF A;  5B8I A;  3IB8 A;  1NNW A;  5IOH A;  3K7W C;  4FBK A;  3HVQ A;  4B2O A;  1OID A;  4DSY A;  3N5U A;  3LL8 A;  2QFP A;  1OIE A;  4NZV A;  4O5G A;  3JYF A;  2WDD A;  2NPP C;  2ZO9 B;  5HPE A;  5JPF A;  4H2I A;  1UF3 A;  3PSO A;  4I5L C;  1OI8 A;  1S3L A;  1S95 A;  1KBP A;  1HO5 A;  1FJM A;  3DW8 C;  2Z06 A;  3C9F A;  4OR9 A;  3QFK A;  4KBP A;  3H68 A;  2WDF A;  1MF8 A;  1UTE A;  3AV0 A;  3T1I A;  4UT2 A;  2DFJ A;  2BQ8 X;  1WAO 1;  1SU1 A;  2NYM C;  5F3W A;  3P71 C;  3TGH A;  1HP1 A;  3QFN A;  5DNY A;  2ZBM A;  4ZVZ A;  4Q7F A;  2R17 A;  2O8A A;  2QJC A;  4H1S A;  4HD0 A;  2ZOA A;  3DSD A;  2P6B A;  4TUI A;  3H69 A;  2O8G A;  3QFO A;  1QFC A;  4F0Z A;  1II7 A;  4UT3 B;  4O24 A;  5GTU A;  3DSC A;  1HPU A;  3PSN A;  2Z1A A;  3RL5 A;  2GJU A;  3QG5 C;  3CK2 A;  5JPE A;  3H66 A;  4TUG A;  3V4Y A;  1AUI A;  3E7A A;  1S70 A;  2BCD A;  3RQZ A;  4G9J A;  4WWL A;  1JK7 A;  4V0X A;  4FCX A;  2A22 A;  1XZW A;  2BDX A;  1T71 A;  2HYO A;  2IE3 C;  3RL3 A;  2USH A;  2CV9 A;  3H60 A;  3D03 A;  1USH A;  1S3M A;  5EQV A;  2IAE C;  3KBP A;  1XM7 A;  3C5W C;  2NYL C;  5INB A;  2WDE A;  2DXN A;  4H2B A;  3E0J A;  4V0W A;  2NXF A;  4ORB A;  1T70 A;  3THO B;  4O4K A;  3ZTV A;  1QHW A;  1TCO A; 
#chains in the Genus database with same CATH homology
 4UWQ A;  2WDC A;  1Z2X A;  4DHL A;  2KKN A;  3QFM A;  4J6O A;  4ORA A;  3AUZ A;  2HY1 A;  3H62 B;  3IVE A;  3IVD A;  4I5N C;  3EGG A;  4H2G A;  4JA9 A;  4DT2 A;  4V0V A;  3GVE A;  1S8E A;  4MOV A;  3E7B A;  4UT3 A;  4LAC C;  4M0V A;  1S3N A;  2IE4 C;  2HYP A;  1V73 A;  1G5B A;  2XMO A;  2QFR A;  5J28 A;  4YKE A;  4MOY A;  4O43 A;  4FBQ A;  1WAR A;  1U32 A;  4IL1 A;  4LU9 A;  2DXL A;  4IYP C;  4JA7 A;  2YVT A;  4KKZ A;  5JJT A;  3ZU0 A;  4MP0 A;  1M63 A;  3FLO A;  3K7V C;  3FGA C;  5C1V A;  1IT6 A;  3H64 A;  4ORC A;  2YEQ A;  3THN A;  1W24 A;  3H61 A;  2JOG A;  4H1Y P;  3EGH A;  2Z72 A;  3H63 A;  2AHD A;  4LTY A;  3RL4 A;  2Q8U A;  4H2F A;  4ZX2 A;  4FBW A;  4XPN A;  3H67 A;  3IB7 A;  1Z2W A;  3ICF A;  5B8I A;  3IB8 A;  1NNW A;  5IOH A;  3K7W C;  4FBK A;  3HVQ A;  4B2O A;  1OID A;  4DSY A;  3N5U A;  3LL8 A;  2QFP A;  1OIE A;  4NZV A;  4O5G A;  3JYF A;  2WDD A;  2NPP C;  2ZO9 B;  5HPE A;  5JPF A;  4H2I A;  1UF3 A;  3PSO A;  4I5L C;  1OI8 A;  1S3L A;  1S95 A;  1KBP A;  1HO5 A;  1FJM A;  3DW8 C;  2Z06 A;  3C9F A;  4OR9 A;  3QFK A;  4KBP A;  3H68 A;  2WDF A;  1MF8 A;  1UTE A;  3AV0 A;  3T1I A;  4UT2 A;  2DFJ A;  2BQ8 X;  1WAO 1;  1SU1 A;  2NYM C;  5F3W A;  3P71 C;  3TGH A;  1HP1 A;  3QFN A;  5DNY A;  2ZBM A;  4ZVZ A;  4Q7F A;  2R17 A;  2O8A A;  2QJC A;  4H1S A;  4HD0 A;  2ZOA A;  3DSD A;  2P6B A;  4TUI A;  3H69 A;  2O8G A;  3QFO A;  1QFC A;  4F0Z A;  1II7 A;  4UT3 B;  4O24 A;  5GTU A;  3DSC A;  1HPU A;  3PSN A;  2Z1A A;  3RL5 A;  2GJU A;  3QG5 C;  3CK2 A;  5JPE A;  3H66 A;  4TUG A;  3V4Y A;  1AUI A;  3E7A A;  1S70 A;  2BCD A;  3RQZ A;  4G9J A;  4WWL A;  1JK7 A;  4V0X A;  4FCX A;  2A22 A;  1XZW A;  2BDX A;  1T71 A;  2HYO A;  2IE3 C;  3RL3 A;  2USH A;  2CV9 A;  3H60 A;  3D03 A;  1USH A;  1S3M A;  5EQV A;  2IAE C;  3KBP A;  1XM7 A;  3C5W C;  2NYL C;  5INB A;  2WDE A;  2DXN A;  4H2B A;  3E0J A;  4V0W A;  2NXF A;  4ORB A;  1T70 A;  3THO B;  4O4K A;  3ZTV A;  1QHW A;  1TCO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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