5J28A

Ki67-pp1g (protein phosphatase 1, gamma isoform) holoenzyme complex
Total Genus 106
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
106
sequence length
293
structure length
293
Chain Sequence
LNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Serine/threonine-protein phosphatase PP1-gamma catalytic sub
publication title The Ki-67 and RepoMan mitotic phosphatases assemble via an identical, yet novel mechanism.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Hydrolase/protein binding
total genus 106
structure length 293
sequence length 293
chains with identical sequence B
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2016-03-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF16891 STPPase_N Serine-threonine protein phosphatase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 5j28A00
1U32A 4KBPA 3KBPA 2WDDA 3H69A 2BDXA 3C5WC 1T70A 3AUZA 4I5LC 1OIDA 4V0XA 1FJMA 1NNWA 4YKEA 5INBA 3IVEA 3E7BA 3QFKA 1S3LA 3DW8C 1S8EA 3AV0A 2DFJA 5IOHA 4H1SA 3DSCA 4I5NC 4UT3A 2JOGA 4H2GA 4MOYA 3RQZA 1S70A 1AUIA 1HPUA 4DT2A 3E7AA 1UF3A 1OI8A 2WDCA 4UWQA 4JA9A 3LL8A 2HYOA 4FBWA 4TUGA 3CK2A 4XPNA 1W24A 1TCOA 3RL5A 2Q8UA 2YVTA 3FGAC 3GVEA 4LTYA 3JYFA 2GJUA 2KKNA 3H67A 3QFMA 4M0VA 5DNYA 1HO5A 2O8AA 1S3NA 3H62B 2QJCA 1UTEA 4FCXA 3EGHA 1M63A 3HVQA 4DHLA 4F0ZA 5J28A 1OIEA 3H66A 1WAO1 3RL3A 4IL1A 1HP1A 4KKZA 4OR9A 5JPFA 1S3MA 4O5GA 4ORAA 2NPPC 4FBKA 4H2FA 3ICFA 2CV9A 3K7WC 4DSYA 4LACC 5JPEA 1S95A 4ORBA 3ZU0A 4V0WA 5HPEA 2Z06A 1SU1A 2QFRA 2Z72A 3QFOA 3RL4A 3H60A 2Z1AA 2HY1A 3TGHA 4MP0A 3V4YA 4B2OA 1II7A 1V73A 1XZWA 3IVDA 1G5BA 3THNA 5EQVA 4TUIA 4ZVZA 2WDFA 3P71C 2NXFA 4IYPC 3QG5C 2O8GA 4J6OA 5C1VA 2AHDA 1T71A 4Q7FA 3QFNA 5B8IA 3PSNA 1QFCA 1MF8A 1KBPA 3H61A 4V0VA 5GTUA 2IE4C 4ZX2A 4H1YP 3THOB 4H2IA 3T1IA 4O43A 4WWLA 2BQ8X 3C9FA 1JK7A 4O4KA 3IB8A 2ZBMA 2P6BA 2NYMC 3ZTVA 2BCDA 1QHWA 1IT6A 3H63A 4H2BA 3PSOA 4HD0A 1WARA 2HYPA 4LU9A 4ORCA 3EGGA 1XM7A 2A22A 4FBQA 4MOVA 3H64A 2USHA 3N5UA 2QFPA 4NZVA 2WDEA 3DSDA 1Z2WA 1USHA 4UT2A 3IB7A 2IAEC 2NYLC 5F3WA 3K7VC 5JJTA 4O24A 3H68A 1Z2XA 2IE3C 4G9JA 4UT3B 4JA7A 2XMOA 2R17A
chains in the Genus database with same CATH superfamily
1U32A 2DXNA 3KBPA 4KBPA 2WDDA 3H69A 2BDXA 3C5WC 1T70A 3AUZA 4I5LC 1OIDA 4V0XA 1FJMA 1NNWA 4YKEA 5INBA 3IVEA 3E7BA 3QFKA 1S3LA 3DW8C 1S8EA 3AV0A 2DFJA 5IOHA 4H1SA 3DSCA 4I5NC 4UT3A 2JOGA 4H2GA 4MOYA 3RQZA 1S70A 1AUIA 1HPUA 4DT2A 3E7AA 1UF3A 1OI8A 2WDCA 4UWQA 4JA9A 3LL8A 2HYOA 4FBWA 4TUGA 3CK2A 4XPNA 1W24A 1TCOA 3RL5A 2Q8UA 2YVTA 3FGAC 3GVEA 4LTYA 3JYFA 2GJUA 2KKNA 3H67A 3QFMA 4M0VA 5DNYA 1HO5A 2O8AA 1S3NA 3H62B 2QJCA 1UTEA 4FCXA 3EGHA 1M63A 3HVQA 4DHLA 4F0ZA 5J28A 1OIEA 3H66A 1WAO1 3E0JA 3RL3A 4IL1A 1HP1A 4KKZA 4OR9A 5JPFA 1S3MA 4O5GA 4ORAA 2NPPC 4FBKA 4H2FA 3ICFA 2CV9A 3K7WC 4DSYA 4LACC 5JPEA 1S95A 4ORBA 3ZU0A 4V0WA 5HPEA 2Z06A 2ZOAA 1SU1A 2QFRA 2Z72A 3QFOA 3RL4A 3H60A 2Z1AA 2HY1A 3TGHA 4MP0A 3V4YA 4B2OA 1II7A 1V73A 1XZWA 3IVDA 1G5BA 3THNA 5EQVA 4TUIA 4ZVZA 2WDFA 3P71C 2NXFA 4IYPC 3QG5C 2O8GA 4J6OA 5C1VA 2AHDA 1T71A 4Q7FA 3QFNA 5B8IA 3PSNA 1QFCA 1MF8A 1KBPA 2YEQA 3H61A 4V0VA 5GTUA 2IE4C 4ZX2A 4H1YP 3THOB 4H2IA 3T1IA 4O43A 4WWLA 2BQ8X 3C9FA 1JK7A 4O4KA 3IB8A 2ZBMA 2P6BA 2NYMC 3ZTVA 2BCDA 1QHWA 1IT6A 3H63A 4H2BA 3PSOA 4HD0A 1WARA 2HYPA 4LU9A 4ORCA 3EGGA 1XM7A 2A22A 4FBQA 4MOVA 3H64A 2USHA 3N5UA 2QFPA 3D03A 4NZVA 2WDEA 3DSDA 1Z2WA 1USHA 4UT2A 3IB7A 2IAEC 2NYLC 5F3WA 2DXLA 3K7VC 3FLOA 5JJTA 4O24A 3H68A 1Z2XA 2IE3C 4G9JA 4UT3B 2ZO9B 4JA7A 2XMOA 2R17A
chains in the Genus database with same CATH topology
1U32A 2DXNA 3KBPA 4KBPA 2WDDA 3H69A 2BDXA 3C5WC 1T70A 3AUZA 4I5LC 1OIDA 4V0XA 1FJMA 1NNWA 4YKEA 5INBA 3IVEA 3E7BA 3QFKA 1S3LA 3DW8C 1S8EA 3AV0A 2DFJA 5IOHA 4H1SA 3DSCA 4I5NC 4UT3A 2JOGA 4H2GA 4MOYA 3RQZA 1S70A 1AUIA 1HPUA 4DT2A 3E7AA 1UF3A 1OI8A 2WDCA 4UWQA 4JA9A 3LL8A 2HYOA 4FBWA 4TUGA 3CK2A 4XPNA 1W24A 1TCOA 3RL5A 2Q8UA 2YVTA 3FGAC 3GVEA 4LTYA 3JYFA 2GJUA 2KKNA 3H67A 3QFMA 4M0VA 5DNYA 1HO5A 2O8AA 1S3NA 3H62B 2QJCA 1UTEA 4FCXA 3EGHA 1M63A 3HVQA 4DHLA 4F0ZA 5J28A 1OIEA 3H66A 1WAO1 3E0JA 3RL3A 4IL1A 1HP1A 4KKZA 4OR9A 5JPFA 1S3MA 4O5GA 4ORAA 2NPPC 4FBKA 4H2FA 3ICFA 2CV9A 3K7WC 4DSYA 4LACC 5JPEA 1S95A 4ORBA 3ZU0A 4V0WA 5HPEA 2Z06A 2ZOAA 1SU1A 2QFRA 2Z72A 3QFOA 3RL4A 3H60A 2Z1AA 2HY1A 3TGHA 4MP0A 3V4YA 4B2OA 1II7A 1V73A 1XZWA 3IVDA 1G5BA 3THNA 5EQVA 4TUIA 4ZVZA 2WDFA 3P71C 2NXFA 4IYPC 3QG5C 2O8GA 4J6OA 5C1VA 2AHDA 1T71A 4Q7FA 3QFNA 5B8IA 3PSNA 1QFCA 1MF8A 1KBPA 2YEQA 3H61A 4V0VA 5GTUA 2IE4C 4ZX2A 4H1YP 3THOB 4H2IA 3T1IA 4O43A 4WWLA 2BQ8X 3C9FA 1JK7A 4O4KA 3IB8A 2ZBMA 2P6BA 2NYMC 3ZTVA 2BCDA 1QHWA 1IT6A 3H63A 4H2BA 3PSOA 4HD0A 1WARA 2HYPA 4LU9A 4ORCA 3EGGA 1XM7A 2A22A 4FBQA 4MOVA 3H64A 2USHA 3N5UA 2QFPA 3D03A 4NZVA 2WDEA 3DSDA 1Z2WA 1USHA 4UT2A 3IB7A 2IAEC 2NYLC 5F3WA 2DXLA 3K7VC 3FLOA 5JJTA 4O24A 3H68A 1Z2XA 2IE3C 4G9JA 4UT3B 2ZO9B 4JA7A 2XMOA 2R17A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1U32 A;  4KBP A;  3KBP A;  2WDD A;  3H69 A;  2BDX A;  3C5W C;  1T70 A;  3AUZ A;  4I5L C;  1OID A;  4V0X A;  1FJM A;  1NNW A;  4YKE A;  5INB A;  3IVE A;  3E7B A;  3QFK A;  1S3L A;  3DW8 C;  1S8E A;  3AV0 A;  2DFJ A;  5IOH A;  4H1S A;  3DSC A;  4I5N C;  4UT3 A;  2JOG A;  4H2G A;  4MOY A;  3RQZ A;  1S70 A;  1AUI A;  1HPU A;  4DT2 A;  3E7A A;  1UF3 A;  1OI8 A;  2WDC A;  4UWQ A;  4JA9 A;  3LL8 A;  2HYO A;  4FBW A;  4TUG A;  3CK2 A;  4XPN A;  1W24 A;  1TCO A;  3RL5 A;  2Q8U A;  2YVT A;  3FGA C;  3GVE A;  4LTY A;  3JYF A;  2GJU A;  2KKN A;  3H67 A;  3QFM A;  4M0V A;  5DNY A;  1HO5 A;  2O8A A;  1S3N A;  3H62 B;  2QJC A;  1UTE A;  4FCX A;  3EGH A;  1M63 A;  3HVQ A;  4DHL A;  4F0Z A;  5J28 A;  1OIE A;  3H66 A;  1WAO 1;  3RL3 A;  4IL1 A;  1HP1 A;  4KKZ A;  4OR9 A;  5JPF A;  1S3M A;  4O5G A;  4ORA A;  2NPP C;  4FBK A;  4H2F A;  3ICF A;  2CV9 A;  3K7W C;  4DSY A;  4LAC C;  5JPE A;  1S95 A;  4ORB A;  3ZU0 A;  4V0W A;  5HPE A;  2Z06 A;  1SU1 A;  2QFR A;  2Z72 A;  3QFO A;  3RL4 A;  3H60 A;  2Z1A A;  2HY1 A;  3TGH A;  4MP0 A;  3V4Y A;  4B2O A;  1II7 A;  1V73 A;  1XZW A;  3IVD A;  1G5B A;  3THN A;  5EQV A;  4TUI A;  4ZVZ A;  2WDF A;  3P71 C;  2NXF A;  4IYP C;  3QG5 C;  2O8G A;  4J6O A;  5C1V A;  2AHD A;  1T71 A;  4Q7F A;  3QFN A;  5B8I A;  3PSN A;  1QFC A;  1MF8 A;  1KBP A;  3H61 A;  4V0V A;  5GTU A;  2IE4 C;  4ZX2 A;  4H1Y P;  3THO B;  4H2I A;  3T1I A;  4O43 A;  4WWL A;  2BQ8 X;  3C9F A;  1JK7 A;  4O4K A;  3IB8 A;  2ZBM A;  2P6B A;  2NYM C;  3ZTV A;  2BCD A;  1QHW A;  1IT6 A;  3H63 A;  4H2B A;  3PSO A;  4HD0 A;  1WAR A;  2HYP A;  4LU9 A;  4ORC A;  3EGG A;  1XM7 A;  2A22 A;  4FBQ A;  4MOV A;  3H64 A;  2USH A;  3N5U A;  2QFP A;  4NZV A;  2WDE A;  3DSD A;  1Z2W A;  1USH A;  4UT2 A;  3IB7 A;  2IAE C;  2NYL C;  5F3W A;  3K7V C;  5JJT A;  4O24 A;  3H68 A;  1Z2X A;  2IE3 C;  4G9J A;  4UT3 B;  4JA7 A;  2XMO A;  2R17 A; 
#chains in the Genus database with same CATH topology
 1U32 A;  2DXN A;  3KBP A;  4KBP A;  2WDD A;  3H69 A;  2BDX A;  3C5W C;  1T70 A;  3AUZ A;  4I5L C;  1OID A;  4V0X A;  1FJM A;  1NNW A;  4YKE A;  5INB A;  3IVE A;  3E7B A;  3QFK A;  1S3L A;  3DW8 C;  1S8E A;  3AV0 A;  2DFJ A;  5IOH A;  4H1S A;  3DSC A;  4I5N C;  4UT3 A;  2JOG A;  4H2G A;  4MOY A;  3RQZ A;  1S70 A;  1AUI A;  1HPU A;  4DT2 A;  3E7A A;  1UF3 A;  1OI8 A;  2WDC A;  4UWQ A;  4JA9 A;  3LL8 A;  2HYO A;  4FBW A;  4TUG A;  3CK2 A;  4XPN A;  1W24 A;  1TCO A;  3RL5 A;  2Q8U A;  2YVT A;  3FGA C;  3GVE A;  4LTY A;  3JYF A;  2GJU A;  2KKN A;  3H67 A;  3QFM A;  4M0V A;  5DNY A;  1HO5 A;  2O8A A;  1S3N A;  3H62 B;  2QJC A;  1UTE A;  4FCX A;  3EGH A;  1M63 A;  3HVQ A;  4DHL A;  4F0Z A;  5J28 A;  1OIE A;  3H66 A;  1WAO 1;  3E0J A;  3RL3 A;  4IL1 A;  1HP1 A;  4KKZ A;  4OR9 A;  5JPF A;  1S3M A;  4O5G A;  4ORA A;  2NPP C;  4FBK A;  4H2F A;  3ICF A;  2CV9 A;  3K7W C;  4DSY A;  4LAC C;  5JPE A;  1S95 A;  4ORB A;  3ZU0 A;  4V0W A;  5HPE A;  2Z06 A;  2ZOA A;  1SU1 A;  2QFR A;  2Z72 A;  3QFO A;  3RL4 A;  3H60 A;  2Z1A A;  2HY1 A;  3TGH A;  4MP0 A;  3V4Y A;  4B2O A;  1II7 A;  1V73 A;  1XZW A;  3IVD A;  1G5B A;  3THN A;  5EQV A;  4TUI A;  4ZVZ A;  2WDF A;  3P71 C;  2NXF A;  4IYP C;  3QG5 C;  2O8G A;  4J6O A;  5C1V A;  2AHD A;  1T71 A;  4Q7F A;  3QFN A;  5B8I A;  3PSN A;  1QFC A;  1MF8 A;  1KBP A;  2YEQ A;  3H61 A;  4V0V A;  5GTU A;  2IE4 C;  4ZX2 A;  4H1Y P;  3THO B;  4H2I A;  3T1I A;  4O43 A;  4WWL A;  2BQ8 X;  3C9F A;  1JK7 A;  4O4K A;  3IB8 A;  2ZBM A;  2P6B A;  2NYM C;  3ZTV A;  2BCD A;  1QHW A;  1IT6 A;  3H63 A;  4H2B A;  3PSO A;  4HD0 A;  1WAR A;  2HYP A;  4LU9 A;  4ORC A;  3EGG A;  1XM7 A;  2A22 A;  4FBQ A;  4MOV A;  3H64 A;  2USH A;  3N5U A;  2QFP A;  3D03 A;  4NZV A;  2WDE A;  3DSD A;  1Z2W A;  1USH A;  4UT2 A;  3IB7 A;  2IAE C;  2NYL C;  5F3W A;  2DXL A;  3K7V C;  3FLO A;  5JJT A;  4O24 A;  3H68 A;  1Z2X A;  2IE3 C;  4G9J A;  4UT3 B;  2ZO9 B;  4JA7 A;  2XMO A;  2R17 A; 
#chains in the Genus database with same CATH homology
 1U32 A;  2DXN A;  3KBP A;  4KBP A;  2WDD A;  3H69 A;  2BDX A;  3C5W C;  1T70 A;  3AUZ A;  4I5L C;  1OID A;  4V0X A;  1FJM A;  1NNW A;  4YKE A;  5INB A;  3IVE A;  3E7B A;  3QFK A;  1S3L A;  3DW8 C;  1S8E A;  3AV0 A;  2DFJ A;  5IOH A;  4H1S A;  3DSC A;  4I5N C;  4UT3 A;  2JOG A;  4H2G A;  4MOY A;  3RQZ A;  1S70 A;  1AUI A;  1HPU A;  4DT2 A;  3E7A A;  1UF3 A;  1OI8 A;  2WDC A;  4UWQ A;  4JA9 A;  3LL8 A;  2HYO A;  4FBW A;  4TUG A;  3CK2 A;  4XPN A;  1W24 A;  1TCO A;  3RL5 A;  2Q8U A;  2YVT A;  3FGA C;  3GVE A;  4LTY A;  3JYF A;  2GJU A;  2KKN A;  3H67 A;  3QFM A;  4M0V A;  5DNY A;  1HO5 A;  2O8A A;  1S3N A;  3H62 B;  2QJC A;  1UTE A;  4FCX A;  3EGH A;  1M63 A;  3HVQ A;  4DHL A;  4F0Z A;  5J28 A;  1OIE A;  3H66 A;  1WAO 1;  3E0J A;  3RL3 A;  4IL1 A;  1HP1 A;  4KKZ A;  4OR9 A;  5JPF A;  1S3M A;  4O5G A;  4ORA A;  2NPP C;  4FBK A;  4H2F A;  3ICF A;  2CV9 A;  3K7W C;  4DSY A;  4LAC C;  5JPE A;  1S95 A;  4ORB A;  3ZU0 A;  4V0W A;  5HPE A;  2Z06 A;  2ZOA A;  1SU1 A;  2QFR A;  2Z72 A;  3QFO A;  3RL4 A;  3H60 A;  2Z1A A;  2HY1 A;  3TGH A;  4MP0 A;  3V4Y A;  4B2O A;  1II7 A;  1V73 A;  1XZW A;  3IVD A;  1G5B A;  3THN A;  5EQV A;  4TUI A;  4ZVZ A;  2WDF A;  3P71 C;  2NXF A;  4IYP C;  3QG5 C;  2O8G A;  4J6O A;  5C1V A;  2AHD A;  1T71 A;  4Q7F A;  3QFN A;  5B8I A;  3PSN A;  1QFC A;  1MF8 A;  1KBP A;  2YEQ A;  3H61 A;  4V0V A;  5GTU A;  2IE4 C;  4ZX2 A;  4H1Y P;  3THO B;  4H2I A;  3T1I A;  4O43 A;  4WWL A;  2BQ8 X;  3C9F A;  1JK7 A;  4O4K A;  3IB8 A;  2ZBM A;  2P6B A;  2NYM C;  3ZTV A;  2BCD A;  1QHW A;  1IT6 A;  3H63 A;  4H2B A;  3PSO A;  4HD0 A;  1WAR A;  2HYP A;  4LU9 A;  4ORC A;  3EGG A;  1XM7 A;  2A22 A;  4FBQ A;  4MOV A;  3H64 A;  2USH A;  3N5U A;  2QFP A;  3D03 A;  4NZV A;  2WDE A;  3DSD A;  1Z2W A;  1USH A;  4UT2 A;  3IB7 A;  2IAE C;  2NYL C;  5F3W A;  2DXL A;  3K7V C;  3FLO A;  5JJT A;  4O24 A;  3H68 A;  1Z2X A;  2IE3 C;  4G9J A;  4UT3 B;  2ZO9 B;  4JA7 A;  2XMO A;  2R17 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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