3RQZA

Crystal structure of metallophosphoesterase from sphaerobacter thermophilus
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
245
structure length
243
Chain Sequence
NAMRILIISDVHANLVALEAVLSDAGRVDDIWSLGDIVGYGPRPRECVELVRVLAPNISVIGNHDWACIGRLSLDNPVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPDAQRVTFHRVEYRIADTQAQMREAGLPESLVTRLAAGV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of metallophosphoesterase from Sphaerobacter thermophilus
rcsb
molecule keywords Metallophosphoesterase
source organism Sphaerobacter thermophilus
molecule tags Hydrolase
total genus 74
structure length 243
sequence length 245
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2011-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12850 Metallophos_2 Calcineurin-like phosphoesterase superfamily domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3rqzA00
5JJTA 3TGHA 3T1IA 4DHLA 3H68A 4O24A 1AUIA 1IT6A 2YVTA 2WDCA 3H60A 3K7WC 4UWQA 4JA9A 1U32A 3QFKA 3H63A 1S3NA 3JYFA 3ZU0A 5JPEA 4LACC 2O8AA 3P71C 2P6BA 1S8EA 2HYPA 1NNWA 3EGGA 3IVEA 4FBQA 2CV9A 2Z1AA 1S3MA 5IOHA 2WDEA 3DSCA 3C5WC 2BDXA 3H62B 4H2BA 3H61A 3IB7A 1WAO1 2JOGA 4UT2A 3H69A 2NXFA 2O8GA 2Z06A 3AUZA 4KBPA 3H66A 3QFOA 4F0ZA 2QJCA 2KKNA 4H2FA 1WARA 4KKZA 3RL5A 2QFPA 1XZWA 5GTUA 1S3LA 2R17A 4I5LC 5JPFA 5C1VA 2XMOA 1UTEA 4M0VA 1Z2WA 4UT3B 4V0WA 2WDDA 1T70A 1II7A 2A22A 2HYOA 2WDFA 1TCOA 3ICFA 2QFRA 4J6OA 3E7AA 5F3WA 3QFNA 3RL3A 4ORBA 1SU1A 2NYLC 4XPNA 1QHWA 1M63A 1S95A 3RQZA 4HD0A 2IE3C 3PSNA 3QG5C 1QFCA 3EGHA 3ZTVA 4WWLA 5DNYA 1HP1A 2IE4C 1OIEA 3H67A 1OIDA 3IB8A 4DT2A 4MOVA 2BQ8X 3C9FA 4MP0A 4TUIA 4UT3A 4V0VA 1HO5A 3DW8C 4IL1A 1G5BA 4LTYA 3DSDA 1T71A 3GVEA 3RL4A 4I5NC 3CK2A 3PSOA 1HPUA 4H2GA 1JK7A 2GJUA 2USHA 4ORCA 3E7BA 4H1YP 1UF3A 3V4YA 4H1SA 3K7VC 3FGAC 3THNA 4DSYA 1Z2XA 4ZVZA 5B8IA 1OI8A 4O43A 5HPEA 2BCDA 3THOB 4YKEA 5J28A 2Q8UA 4FBKA 4TUGA 2AHDA 4B2OA 4MOYA 2DFJA 4LU9A 4O5GA 3KBPA 4FCXA 1XM7A 5INBA 1FJMA 2ZBMA 3IVDA 3AV0A 4IYPC 2NPPC 4ORAA 4H2IA 4NZVA 1W24A 1S70A 5EQVA 2Z72A 4G9JA 3N5UA 4ZX2A 2NYMC 1MF8A 4V0XA 1KBPA 4O4KA 3QFMA 1V73A 4OR9A 1USHA 2IAEC 4JA7A 2HY1A 4Q7FA 3HVQA 3H64A 3LL8A 4FBWA
chains in the Genus database with same CATH superfamily
5JJTA 3TGHA 3T1IA 4DHLA 3H68A 4O24A 1AUIA 1IT6A 2YVTA 2WDCA 3H60A 3K7WC 4UWQA 4JA9A 1U32A 3QFKA 3H63A 1S3NA 3JYFA 3ZU0A 5JPEA 4LACC 2O8AA 3P71C 2P6BA 1S8EA 2HYPA 1NNWA 3EGGA 3IVEA 4FBQA 2CV9A 2Z1AA 1S3MA 5IOHA 2WDEA 3DSCA 3C5WC 2DXLA 2BDXA 3H62B 4H2BA 3H61A 3IB7A 1WAO1 2JOGA 4UT2A 3H69A 2NXFA 2O8GA 2Z06A 3AUZA 4KBPA 3H66A 3QFOA 4F0ZA 2QJCA 2KKNA 4H2FA 1WARA 4KKZA 3RL5A 2QFPA 3E0JA 1XZWA 5GTUA 1S3LA 2R17A 4I5LC 5JPFA 5C1VA 2XMOA 1UTEA 4M0VA 1Z2WA 4UT3B 4V0WA 2WDDA 1T70A 1II7A 2A22A 2HYOA 2WDFA 1TCOA 3ICFA 2QFRA 3FLOA 4J6OA 3E7AA 5F3WA 3QFNA 3RL3A 4ORBA 1SU1A 2NYLC 4XPNA 1QHWA 1M63A 1S95A 3RQZA 4HD0A 2IE3C 3PSNA 3QG5C 1QFCA 3EGHA 3ZTVA 4WWLA 5DNYA 1HP1A 2IE4C 1OIEA 3H67A 1OIDA 3IB8A 4DT2A 4MOVA 2BQ8X 3C9FA 4MP0A 4TUIA 4UT3A 4V0VA 1HO5A 3DW8C 4IL1A 1G5BA 4LTYA 3DSDA 1T71A 3GVEA 3RL4A 4I5NC 3CK2A 3PSOA 1HPUA 4H2GA 1JK7A 2GJUA 2USHA 4ORCA 3E7BA 4H1YP 1UF3A 3V4YA 4H1SA 3K7VC 3FGAC 3THNA 4DSYA 1Z2XA 4ZVZA 5B8IA 1OI8A 4O43A 5HPEA 2BCDA 3THOB 2ZOAA 4YKEA 2Q8UA 5J28A 4FBKA 4TUGA 2AHDA 4B2OA 2YEQA 2DFJA 4LU9A 4MOYA 4O5GA 3KBPA 4FCXA 1XM7A 5INBA 1FJMA 2ZBMA 3IVDA 3AV0A 4IYPC 2NPPC 4ORAA 4H2IA 2ZO9B 1W24A 4NZVA 1S70A 5EQVA 2Z72A 4G9JA 3N5UA 4ZX2A 2NYMC 1MF8A 4V0XA 1KBPA 4O4KA 3QFMA 1V73A 3D03A 4OR9A 1USHA 2IAEC 4FBWA 4JA7A 2HY1A 4Q7FA 3HVQA 3H64A 3LL8A 2DXNA
chains in the Genus database with same CATH topology
5JJTA 3TGHA 3T1IA 4DHLA 3H68A 4O24A 1AUIA 1IT6A 2YVTA 2WDCA 3H60A 3K7WC 4UWQA 4JA9A 1U32A 3QFKA 3H63A 1S3NA 3JYFA 3ZU0A 5JPEA 4LACC 2O8AA 3P71C 2P6BA 1S8EA 2HYPA 1NNWA 3EGGA 3IVEA 4FBQA 2CV9A 2Z1AA 1S3MA 5IOHA 2WDEA 3DSCA 3C5WC 2DXLA 2BDXA 3H62B 4H2BA 3H61A 3IB7A 1WAO1 2JOGA 4UT2A 3H69A 2NXFA 2O8GA 2Z06A 3AUZA 4KBPA 3H66A 3QFOA 4F0ZA 2QJCA 2KKNA 4H2FA 1WARA 4KKZA 3RL5A 2QFPA 3E0JA 1XZWA 5GTUA 1S3LA 2R17A 4I5LC 5JPFA 5C1VA 2XMOA 1UTEA 4M0VA 1Z2WA 4UT3B 4V0WA 2WDDA 1T70A 1II7A 2A22A 2HYOA 2WDFA 1TCOA 3ICFA 2QFRA 3FLOA 4J6OA 3E7AA 5F3WA 3QFNA 3RL3A 4ORBA 1SU1A 2NYLC 4XPNA 1QHWA 1M63A 1S95A 3RQZA 4HD0A 2IE3C 3PSNA 3QG5C 1QFCA 3EGHA 3ZTVA 4WWLA 5DNYA 1HP1A 2IE4C 1OIEA 3H67A 1OIDA 3IB8A 4DT2A 4MOVA 2BQ8X 3C9FA 4MP0A 4TUIA 4UT3A 4V0VA 1HO5A 3DW8C 4IL1A 1G5BA 4LTYA 3DSDA 1T71A 3GVEA 3RL4A 4I5NC 3CK2A 3PSOA 1HPUA 4H2GA 1JK7A 2GJUA 2USHA 4ORCA 3E7BA 4H1YP 1UF3A 3V4YA 4H1SA 3K7VC 3FGAC 3THNA 4DSYA 1Z2XA 4ZVZA 5B8IA 1OI8A 4O43A 5HPEA 2BCDA 3THOB 2ZOAA 4YKEA 2Q8UA 5J28A 4FBKA 4TUGA 2AHDA 4B2OA 2YEQA 2DFJA 4LU9A 4MOYA 4O5GA 3KBPA 4FCXA 1XM7A 5INBA 1FJMA 2ZBMA 3IVDA 3AV0A 4IYPC 2NPPC 4ORAA 4H2IA 2ZO9B 1W24A 4NZVA 1S70A 5EQVA 2Z72A 4G9JA 3N5UA 4ZX2A 2NYMC 1MF8A 4V0XA 1KBPA 4O4KA 3QFMA 1V73A 3D03A 4OR9A 1USHA 2IAEC 4FBWA 4JA7A 2HY1A 4Q7FA 3HVQA 3H64A 3LL8A 2DXNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JJT A;  3TGH A;  3T1I A;  4DHL A;  3H68 A;  4O24 A;  1AUI A;  1IT6 A;  2YVT A;  2WDC A;  3H60 A;  3K7W C;  4UWQ A;  4JA9 A;  1U32 A;  3QFK A;  3H63 A;  1S3N A;  3JYF A;  3ZU0 A;  5JPE A;  4LAC C;  2O8A A;  3P71 C;  2P6B A;  1S8E A;  2HYP A;  1NNW A;  3EGG A;  3IVE A;  4FBQ A;  2CV9 A;  2Z1A A;  1S3M A;  5IOH A;  2WDE A;  3DSC A;  3C5W C;  2BDX A;  3H62 B;  4H2B A;  3H61 A;  3IB7 A;  1WAO 1;  2JOG A;  4UT2 A;  3H69 A;  2NXF A;  2O8G A;  2Z06 A;  3AUZ A;  4KBP A;  3H66 A;  3QFO A;  4F0Z A;  2QJC A;  2KKN A;  4H2F A;  1WAR A;  4KKZ A;  3RL5 A;  2QFP A;  1XZW A;  5GTU A;  1S3L A;  2R17 A;  4I5L C;  5JPF A;  5C1V A;  2XMO A;  1UTE A;  4M0V A;  1Z2W A;  4UT3 B;  4V0W A;  2WDD A;  1T70 A;  1II7 A;  2A22 A;  2HYO A;  2WDF A;  1TCO A;  3ICF A;  2QFR A;  4J6O A;  3E7A A;  5F3W A;  3QFN A;  3RL3 A;  4ORB A;  1SU1 A;  2NYL C;  4XPN A;  1QHW A;  1M63 A;  1S95 A;  3RQZ A;  4HD0 A;  2IE3 C;  3PSN A;  3QG5 C;  1QFC A;  3EGH A;  3ZTV A;  4WWL A;  5DNY A;  1HP1 A;  2IE4 C;  1OIE A;  3H67 A;  1OID A;  3IB8 A;  4DT2 A;  4MOV A;  2BQ8 X;  3C9F A;  4MP0 A;  4TUI A;  4UT3 A;  4V0V A;  1HO5 A;  3DW8 C;  4IL1 A;  1G5B A;  4LTY A;  3DSD A;  1T71 A;  3GVE A;  3RL4 A;  4I5N C;  3CK2 A;  3PSO A;  1HPU A;  4H2G A;  1JK7 A;  2GJU A;  2USH A;  4ORC A;  3E7B A;  4H1Y P;  1UF3 A;  3V4Y A;  4H1S A;  3K7V C;  3FGA C;  3THN A;  4DSY A;  1Z2X A;  4ZVZ A;  5B8I A;  1OI8 A;  4O43 A;  5HPE A;  2BCD A;  3THO B;  4YKE A;  5J28 A;  2Q8U A;  4FBK A;  4TUG A;  2AHD A;  4B2O A;  4MOY A;  2DFJ A;  4LU9 A;  4O5G A;  3KBP A;  4FCX A;  1XM7 A;  5INB A;  1FJM A;  2ZBM A;  3IVD A;  3AV0 A;  4IYP C;  2NPP C;  4ORA A;  4H2I A;  4NZV A;  1W24 A;  1S70 A;  5EQV A;  2Z72 A;  4G9J A;  3N5U A;  4ZX2 A;  2NYM C;  1MF8 A;  4V0X A;  1KBP A;  4O4K A;  3QFM A;  1V73 A;  4OR9 A;  1USH A;  2IAE C;  4JA7 A;  2HY1 A;  4Q7F A;  3HVQ A;  3H64 A;  3LL8 A;  4FBW A; 
#chains in the Genus database with same CATH topology
 5JJT A;  3TGH A;  3T1I A;  4DHL A;  3H68 A;  4O24 A;  1AUI A;  1IT6 A;  2YVT A;  2WDC A;  3H60 A;  3K7W C;  4UWQ A;  4JA9 A;  1U32 A;  3QFK A;  3H63 A;  1S3N A;  3JYF A;  3ZU0 A;  5JPE A;  4LAC C;  2O8A A;  3P71 C;  2P6B A;  1S8E A;  2HYP A;  1NNW A;  3EGG A;  3IVE A;  4FBQ A;  2CV9 A;  2Z1A A;  1S3M A;  5IOH A;  2WDE A;  3DSC A;  3C5W C;  2DXL A;  2BDX A;  3H62 B;  4H2B A;  3H61 A;  3IB7 A;  1WAO 1;  2JOG A;  4UT2 A;  3H69 A;  2NXF A;  2O8G A;  2Z06 A;  3AUZ A;  4KBP A;  3H66 A;  3QFO A;  4F0Z A;  2QJC A;  2KKN A;  4H2F A;  1WAR A;  4KKZ A;  3RL5 A;  2QFP A;  3E0J A;  1XZW A;  5GTU A;  1S3L A;  2R17 A;  4I5L C;  5JPF A;  5C1V A;  2XMO A;  1UTE A;  4M0V A;  1Z2W A;  4UT3 B;  4V0W A;  2WDD A;  1T70 A;  1II7 A;  2A22 A;  2HYO A;  2WDF A;  1TCO A;  3ICF A;  2QFR A;  3FLO A;  4J6O A;  3E7A A;  5F3W A;  3QFN A;  3RL3 A;  4ORB A;  1SU1 A;  2NYL C;  4XPN A;  1QHW A;  1M63 A;  1S95 A;  3RQZ A;  4HD0 A;  2IE3 C;  3PSN A;  3QG5 C;  1QFC A;  3EGH A;  3ZTV A;  4WWL A;  5DNY A;  1HP1 A;  2IE4 C;  1OIE A;  3H67 A;  1OID A;  3IB8 A;  4DT2 A;  4MOV A;  2BQ8 X;  3C9F A;  4MP0 A;  4TUI A;  4UT3 A;  4V0V A;  1HO5 A;  3DW8 C;  4IL1 A;  1G5B A;  4LTY A;  3DSD A;  1T71 A;  3GVE A;  3RL4 A;  4I5N C;  3CK2 A;  3PSO A;  1HPU A;  4H2G A;  1JK7 A;  2GJU A;  2USH A;  4ORC A;  3E7B A;  4H1Y P;  1UF3 A;  3V4Y A;  4H1S A;  3K7V C;  3FGA C;  3THN A;  4DSY A;  1Z2X A;  4ZVZ A;  5B8I A;  1OI8 A;  4O43 A;  5HPE A;  2BCD A;  3THO B;  2ZOA A;  4YKE A;  2Q8U A;  5J28 A;  4FBK A;  4TUG A;  2AHD A;  4B2O A;  2YEQ A;  2DFJ A;  4LU9 A;  4MOY A;  4O5G A;  3KBP A;  4FCX A;  1XM7 A;  5INB A;  1FJM A;  2ZBM A;  3IVD A;  3AV0 A;  4IYP C;  2NPP C;  4ORA A;  4H2I A;  2ZO9 B;  1W24 A;  4NZV A;  1S70 A;  5EQV A;  2Z72 A;  4G9J A;  3N5U A;  4ZX2 A;  2NYM C;  1MF8 A;  4V0X A;  1KBP A;  4O4K A;  3QFM A;  1V73 A;  3D03 A;  4OR9 A;  1USH A;  2IAE C;  4FBW A;  4JA7 A;  2HY1 A;  4Q7F A;  3HVQ A;  3H64 A;  3LL8 A;  2DXN A; 
#chains in the Genus database with same CATH homology
 5JJT A;  3TGH A;  3T1I A;  4DHL A;  3H68 A;  4O24 A;  1AUI A;  1IT6 A;  2YVT A;  2WDC A;  3H60 A;  3K7W C;  4UWQ A;  4JA9 A;  1U32 A;  3QFK A;  3H63 A;  1S3N A;  3JYF A;  3ZU0 A;  5JPE A;  4LAC C;  2O8A A;  3P71 C;  2P6B A;  1S8E A;  2HYP A;  1NNW A;  3EGG A;  3IVE A;  4FBQ A;  2CV9 A;  2Z1A A;  1S3M A;  5IOH A;  2WDE A;  3DSC A;  3C5W C;  2DXL A;  2BDX A;  3H62 B;  4H2B A;  3H61 A;  3IB7 A;  1WAO 1;  2JOG A;  4UT2 A;  3H69 A;  2NXF A;  2O8G A;  2Z06 A;  3AUZ A;  4KBP A;  3H66 A;  3QFO A;  4F0Z A;  2QJC A;  2KKN A;  4H2F A;  1WAR A;  4KKZ A;  3RL5 A;  2QFP A;  3E0J A;  1XZW A;  5GTU A;  1S3L A;  2R17 A;  4I5L C;  5JPF A;  5C1V A;  2XMO A;  1UTE A;  4M0V A;  1Z2W A;  4UT3 B;  4V0W A;  2WDD A;  1T70 A;  1II7 A;  2A22 A;  2HYO A;  2WDF A;  1TCO A;  3ICF A;  2QFR A;  3FLO A;  4J6O A;  3E7A A;  5F3W A;  3QFN A;  3RL3 A;  4ORB A;  1SU1 A;  2NYL C;  4XPN A;  1QHW A;  1M63 A;  1S95 A;  3RQZ A;  4HD0 A;  2IE3 C;  3PSN A;  3QG5 C;  1QFC A;  3EGH A;  3ZTV A;  4WWL A;  5DNY A;  1HP1 A;  2IE4 C;  1OIE A;  3H67 A;  1OID A;  3IB8 A;  4DT2 A;  4MOV A;  2BQ8 X;  3C9F A;  4MP0 A;  4TUI A;  4UT3 A;  4V0V A;  1HO5 A;  3DW8 C;  4IL1 A;  1G5B A;  4LTY A;  3DSD A;  1T71 A;  3GVE A;  3RL4 A;  4I5N C;  3CK2 A;  3PSO A;  1HPU A;  4H2G A;  1JK7 A;  2GJU A;  2USH A;  4ORC A;  3E7B A;  4H1Y P;  1UF3 A;  3V4Y A;  4H1S A;  3K7V C;  3FGA C;  3THN A;  4DSY A;  1Z2X A;  4ZVZ A;  5B8I A;  1OI8 A;  4O43 A;  5HPE A;  2BCD A;  3THO B;  2ZOA A;  4YKE A;  2Q8U A;  5J28 A;  4FBK A;  4TUG A;  2AHD A;  4B2O A;  2YEQ A;  2DFJ A;  4LU9 A;  4MOY A;  4O5G A;  3KBP A;  4FCX A;  1XM7 A;  5INB A;  1FJM A;  2ZBM A;  3IVD A;  3AV0 A;  4IYP C;  2NPP C;  4ORA A;  4H2I A;  2ZO9 B;  1W24 A;  4NZV A;  1S70 A;  5EQV A;  2Z72 A;  4G9J A;  3N5U A;  4ZX2 A;  2NYM C;  1MF8 A;  4V0X A;  1KBP A;  4O4K A;  3QFM A;  1V73 A;  3D03 A;  4OR9 A;  1USH A;  2IAE C;  4FBW A;  4JA7 A;  2HY1 A;  4Q7F A;  3HVQ A;  3H64 A;  3LL8 A;  2DXN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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