3RQZA

Crystal structure of metallophosphoesterase from sphaerobacter thermophilus
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
245
structure length
243
Chain Sequence
NAMRILIISDVHANLVALEAVLSDAGRVDDIWSLGDIVGYGPRPRECVELVRVLAPNISVIGNHDWACIGRLSLDNPVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPDAQRVTFHRVEYRIADTQAQMREAGLPESLVTRLAAGV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of metallophosphoesterase from Sphaerobacter thermophilus
rcsb
source organism Sphaerobacter thermophilus
molecule tags Hydrolase
molecule keywords Metallophosphoesterase
total genus 74
structure length 243
sequence length 245
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2011-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12850 Metallophos_2 Calcineurin-like phosphoesterase superfamily domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3rqzA00
3RL3A 5JJTA 3H66A 4JA7A 4UT2A 3RL5A 5JPFA 5INBA 4Q7FA 3H62B 3IVEA 1V73A 4OR9A 2Z06A 3GVEA 4H2IA 1XZWA 5J28A 2GJUA 2NPPC 4ZVZA 3LL8A 2IE3C 4TUGA 1S70A 3KBPA 3DW8C 4DT2A 5HPEA 1U32A 1W24A 4O5GA 3RL4A 3CK2A 4FBQA 3C9FA 1JK7A 3AV0A 3ZTVA 2WDDA 5F3WA 1S3MA 4DSYA 1HPUA 2YVTA 1USHA 2Q8UA 1OI8A 4LU9A 1TCOA 3JYFA 1SU1A 3K7VC 4ORCA 2BDXA 4H1SA 4O43A 2A22A 4HD0A 4ZX2A 4H1YP 4V0VA 4O4KA 4MP0A 5C1VA 2P6BA 4FCXA 4MOVA 3E7BA 1KBPA 3IB7A 1II7A 3H68A 2DFJA 4UT3B 3RQZA 1G5BA 2O8GA 1WAO1 2QFRA 1M63A 3QFMA 1Z2XA 4I5NC 1S8EA 1HP1A 2ZBMA 3P71C 2JOGA 3ICFA 4NZVA 1XM7A 2WDEA 4LACC 1UTEA 4LTYA 4V0WA 4F0ZA 2O8AA 1HO5A 2QFPA 3QFKA 4H2BA 3QFNA 4YKEA 4J6OA 1MF8A 4M0VA 2IAEC 3TGHA 1NNWA 3THOB 2R17A 2NYLC 3IVDA 3QFOA 4KKZA 5B8IA 1IT6A 3H69A 3H67A 1QFCA 1WARA 3EGGA 1S3NA 3C5WC 4DHLA 1OIEA 3H64A 3QG5C 3AUZA 3H61A 4H2GA 4IL1A 4MOYA 3H63A 3PSNA 5GTUA 5IOHA 3EGHA 1QHWA 4FBWA 3HVQA 1Z2WA 1T71A 4ORBA 3V4YA 2HYOA 4O24A 2HYPA 2USHA 3THNA 2AHDA 2Z1AA 2Z72A 4XPNA 4IYPC 2QJCA 4B2OA 3E7AA 1S3LA 3IB8A 1S95A 2WDCA 4I5LC 3K7WC 4ORAA 4G9JA 4UT3A 5JPEA 5EQVA 2CV9A 3H60A 4TUIA 4WWLA 3ZU0A 2NXFA 2XMOA 1OIDA 3PSOA 3DSDA 4UWQA 3T1IA 3FGAC 2NYMC 4JA9A 4H2FA 1FJMA 4FBKA 2WDFA 4KBPA 4V0XA 1T70A 2IE4C 1AUIA 2BQ8X 3DSCA 5DNYA 2BCDA 1UF3A 2HY1A 2KKNA 3N5UA
chains in the Genus database with same CATH superfamily
3RL3A 5JJTA 3H66A 4JA7A 4UT2A 3RL5A 5JPFA 5INBA 4Q7FA 3H62B 3IVEA 1V73A 4OR9A 2YEQA 2Z06A 3GVEA 4H2IA 1XZWA 5J28A 2GJUA 2NPPC 4ZVZA 3LL8A 2IE3C 4TUGA 1S70A 3KBPA 3DW8C 4DT2A 5HPEA 1U32A 1W24A 4O5GA 3RL4A 3CK2A 4FBQA 2DXNA 3C9FA 1JK7A 3AV0A 3ZTVA 2ZOAA 2WDDA 5F3WA 1S3MA 4DSYA 1HPUA 2YVTA 1USHA 2Q8UA 1OI8A 4LU9A 1TCOA 3JYFA 1SU1A 3K7VC 4ORCA 2BDXA 4H1SA 3E0JA 2A22A 4O43A 4HD0A 4ZX2A 4H1YP 4V0VA 4O4KA 4MP0A 5C1VA 2P6BA 4FCXA 4MOVA 3E7BA 1KBPA 3IB7A 1II7A 3H68A 3D03A 2DFJA 4UT3B 3RQZA 1G5BA 2O8GA 1WAO1 2QFRA 1M63A 3QFMA 1Z2XA 4I5NC 1S8EA 1HP1A 2ZBMA 3P71C 2JOGA 3ICFA 4NZVA 1XM7A 2WDEA 4LACC 1UTEA 4LTYA 4V0WA 4F0ZA 2O8AA 1HO5A 2QFPA 3QFKA 4H2BA 3QFNA 3FLOA 4J6OA 4YKEA 1MF8A 4M0VA 2IAEC 3TGHA 1NNWA 3THOB 2R17A 2NYLC 3IVDA 3QFOA 4KKZA 5B8IA 1IT6A 3H69A 3H67A 1QFCA 1WARA 3EGGA 1S3NA 3C5WC 4DHLA 1OIEA 3H64A 3QG5C 3AUZA 3H61A 4H2GA 4IL1A 4MOYA 3H63A 3PSNA 5GTUA 5IOHA 3EGHA 1QHWA 4FBWA 3HVQA 1Z2WA 1T71A 4ORBA 3V4YA 2HYOA 4O24A 2HYPA 2USHA 3THNA 2AHDA 2Z1AA 2Z72A 4XPNA 4IYPC 2QJCA 4B2OA 3E7AA 1S3LA 3IB8A 1S95A 2WDCA 4I5LC 3K7WC 4ORAA 4G9JA 4UT3A 5JPEA 5EQVA 2CV9A 2ZO9B 3H60A 4TUIA 4WWLA 2DXLA 3ZU0A 2NXFA 2XMOA 1OIDA 3PSOA 3DSDA 4UWQA 3T1IA 3FGAC 2NYMC 4JA9A 4H2FA 1FJMA 4FBKA 2WDFA 4KBPA 4V0XA 1T70A 2IE4C 1AUIA 2BQ8X 3DSCA 5DNYA 2BCDA 1UF3A 2HY1A 2KKNA 3N5UA
chains in the Genus database with same CATH topology
3RL3A 5JJTA 3H66A 4JA7A 4UT2A 3RL5A 5JPFA 5INBA 4Q7FA 3H62B 3IVEA 1V73A 4OR9A 2YEQA 2Z06A 3GVEA 4H2IA 1XZWA 5J28A 2GJUA 2NPPC 4ZVZA 3LL8A 2IE3C 4TUGA 1S70A 3KBPA 3DW8C 4DT2A 5HPEA 1U32A 1W24A 4O5GA 3RL4A 3CK2A 4FBQA 2DXNA 3C9FA 1JK7A 3AV0A 3ZTVA 2ZOAA 2WDDA 5F3WA 1S3MA 4DSYA 1HPUA 2YVTA 1USHA 2Q8UA 1OI8A 4LU9A 1TCOA 3JYFA 1SU1A 3K7VC 4ORCA 2BDXA 4H1SA 3E0JA 2A22A 4O43A 4HD0A 4ZX2A 4H1YP 4V0VA 4O4KA 4MP0A 5C1VA 2P6BA 4FCXA 4MOVA 3E7BA 1KBPA 3IB7A 1II7A 3H68A 3D03A 2DFJA 4UT3B 3RQZA 1G5BA 2O8GA 1WAO1 2QFRA 1M63A 3QFMA 1Z2XA 4I5NC 1S8EA 1HP1A 2ZBMA 3P71C 2JOGA 3ICFA 4NZVA 1XM7A 2WDEA 4LACC 1UTEA 4LTYA 4V0WA 4F0ZA 2O8AA 1HO5A 2QFPA 3QFKA 4H2BA 3QFNA 3FLOA 4J6OA 4YKEA 1MF8A 4M0VA 2IAEC 3TGHA 1NNWA 3THOB 2R17A 2NYLC 3IVDA 3QFOA 4KKZA 5B8IA 1IT6A 3H69A 3H67A 1QFCA 1WARA 3EGGA 1S3NA 3C5WC 4DHLA 1OIEA 3H64A 3QG5C 3AUZA 3H61A 4H2GA 4IL1A 4MOYA 3H63A 3PSNA 5GTUA 5IOHA 3EGHA 1QHWA 4FBWA 3HVQA 1Z2WA 1T71A 4ORBA 3V4YA 2HYOA 4O24A 2HYPA 2USHA 3THNA 2AHDA 2Z1AA 2Z72A 4XPNA 4IYPC 2QJCA 4B2OA 3E7AA 1S3LA 3IB8A 1S95A 2WDCA 4I5LC 3K7WC 4ORAA 4G9JA 4UT3A 5JPEA 5EQVA 2CV9A 2ZO9B 3H60A 4TUIA 4WWLA 2DXLA 3ZU0A 2NXFA 2XMOA 1OIDA 3PSOA 3DSDA 4UWQA 3T1IA 3FGAC 2NYMC 4JA9A 4H2FA 1FJMA 4FBKA 2WDFA 4KBPA 4V0XA 1T70A 2IE4C 1AUIA 2BQ8X 3DSCA 5DNYA 2BCDA 1UF3A 2HY1A 2KKNA 3N5UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RL3 A;  5JJT A;  3H66 A;  4JA7 A;  4UT2 A;  3RL5 A;  5JPF A;  5INB A;  4Q7F A;  3H62 B;  3IVE A;  1V73 A;  4OR9 A;  2Z06 A;  3GVE A;  4H2I A;  1XZW A;  5J28 A;  2GJU A;  2NPP C;  4ZVZ A;  3LL8 A;  2IE3 C;  4TUG A;  1S70 A;  3KBP A;  3DW8 C;  4DT2 A;  5HPE A;  1U32 A;  1W24 A;  4O5G A;  3RL4 A;  3CK2 A;  4FBQ A;  3C9F A;  1JK7 A;  3AV0 A;  3ZTV A;  2WDD A;  5F3W A;  1S3M A;  4DSY A;  1HPU A;  2YVT A;  1USH A;  2Q8U A;  1OI8 A;  4LU9 A;  1TCO A;  3JYF A;  1SU1 A;  3K7V C;  4ORC A;  2BDX A;  4H1S A;  4O43 A;  2A22 A;  4HD0 A;  4ZX2 A;  4H1Y P;  4V0V A;  4O4K A;  4MP0 A;  5C1V A;  2P6B A;  4FCX A;  4MOV A;  3E7B A;  1KBP A;  3IB7 A;  1II7 A;  3H68 A;  2DFJ A;  4UT3 B;  3RQZ A;  1G5B A;  2O8G A;  1WAO 1;  2QFR A;  1M63 A;  3QFM A;  1Z2X A;  4I5N C;  1S8E A;  1HP1 A;  2ZBM A;  3P71 C;  2JOG A;  3ICF A;  4NZV A;  1XM7 A;  2WDE A;  4LAC C;  1UTE A;  4LTY A;  4V0W A;  4F0Z A;  2O8A A;  1HO5 A;  2QFP A;  3QFK A;  4H2B A;  3QFN A;  4YKE A;  4J6O A;  1MF8 A;  4M0V A;  2IAE C;  3TGH A;  1NNW A;  3THO B;  2R17 A;  2NYL C;  3IVD A;  3QFO A;  4KKZ A;  5B8I A;  1IT6 A;  3H69 A;  3H67 A;  1QFC A;  1WAR A;  3EGG A;  1S3N A;  3C5W C;  4DHL A;  1OIE A;  3H64 A;  3QG5 C;  3AUZ A;  3H61 A;  4H2G A;  4IL1 A;  4MOY A;  3H63 A;  3PSN A;  5GTU A;  5IOH A;  3EGH A;  1QHW A;  4FBW A;  3HVQ A;  1Z2W A;  1T71 A;  4ORB A;  3V4Y A;  2HYO A;  4O24 A;  2HYP A;  2USH A;  3THN A;  2AHD A;  2Z1A A;  2Z72 A;  4XPN A;  4IYP C;  2QJC A;  4B2O A;  3E7A A;  1S3L A;  3IB8 A;  1S95 A;  2WDC A;  4I5L C;  3K7W C;  4ORA A;  4G9J A;  4UT3 A;  5JPE A;  5EQV A;  2CV9 A;  3H60 A;  4TUI A;  4WWL A;  3ZU0 A;  2NXF A;  2XMO A;  1OID A;  3PSO A;  3DSD A;  4UWQ A;  3T1I A;  3FGA C;  2NYM C;  4JA9 A;  4H2F A;  1FJM A;  4FBK A;  2WDF A;  4KBP A;  4V0X A;  1T70 A;  2IE4 C;  1AUI A;  2BQ8 X;  3DSC A;  5DNY A;  2BCD A;  1UF3 A;  2HY1 A;  2KKN A;  3N5U A; 
#chains in the Genus database with same CATH topology
 3RL3 A;  5JJT A;  3H66 A;  4JA7 A;  4UT2 A;  3RL5 A;  5JPF A;  5INB A;  4Q7F A;  3H62 B;  3IVE A;  1V73 A;  4OR9 A;  2YEQ A;  2Z06 A;  3GVE A;  4H2I A;  1XZW A;  5J28 A;  2GJU A;  2NPP C;  4ZVZ A;  3LL8 A;  2IE3 C;  4TUG A;  1S70 A;  3KBP A;  3DW8 C;  4DT2 A;  5HPE A;  1U32 A;  1W24 A;  4O5G A;  3RL4 A;  3CK2 A;  4FBQ A;  2DXN A;  3C9F A;  1JK7 A;  3AV0 A;  3ZTV A;  2ZOA A;  2WDD A;  5F3W A;  1S3M A;  4DSY A;  1HPU A;  2YVT A;  1USH A;  2Q8U A;  1OI8 A;  4LU9 A;  1TCO A;  3JYF A;  1SU1 A;  3K7V C;  4ORC A;  2BDX A;  4H1S A;  3E0J A;  2A22 A;  4O43 A;  4HD0 A;  4ZX2 A;  4H1Y P;  4V0V A;  4O4K A;  4MP0 A;  5C1V A;  2P6B A;  4FCX A;  4MOV A;  3E7B A;  1KBP A;  3IB7 A;  1II7 A;  3H68 A;  3D03 A;  2DFJ A;  4UT3 B;  3RQZ A;  1G5B A;  2O8G A;  1WAO 1;  2QFR A;  1M63 A;  3QFM A;  1Z2X A;  4I5N C;  1S8E A;  1HP1 A;  2ZBM A;  3P71 C;  2JOG A;  3ICF A;  4NZV A;  1XM7 A;  2WDE A;  4LAC C;  1UTE A;  4LTY A;  4V0W A;  4F0Z A;  2O8A A;  1HO5 A;  2QFP A;  3QFK A;  4H2B A;  3QFN A;  3FLO A;  4J6O A;  4YKE A;  1MF8 A;  4M0V A;  2IAE C;  3TGH A;  1NNW A;  3THO B;  2R17 A;  2NYL C;  3IVD A;  3QFO A;  4KKZ A;  5B8I A;  1IT6 A;  3H69 A;  3H67 A;  1QFC A;  1WAR A;  3EGG A;  1S3N A;  3C5W C;  4DHL A;  1OIE A;  3H64 A;  3QG5 C;  3AUZ A;  3H61 A;  4H2G A;  4IL1 A;  4MOY A;  3H63 A;  3PSN A;  5GTU A;  5IOH A;  3EGH A;  1QHW A;  4FBW A;  3HVQ A;  1Z2W A;  1T71 A;  4ORB A;  3V4Y A;  2HYO A;  4O24 A;  2HYP A;  2USH A;  3THN A;  2AHD A;  2Z1A A;  2Z72 A;  4XPN A;  4IYP C;  2QJC A;  4B2O A;  3E7A A;  1S3L A;  3IB8 A;  1S95 A;  2WDC A;  4I5L C;  3K7W C;  4ORA A;  4G9J A;  4UT3 A;  5JPE A;  5EQV A;  2CV9 A;  2ZO9 B;  3H60 A;  4TUI A;  4WWL A;  2DXL A;  3ZU0 A;  2NXF A;  2XMO A;  1OID A;  3PSO A;  3DSD A;  4UWQ A;  3T1I A;  3FGA C;  2NYM C;  4JA9 A;  4H2F A;  1FJM A;  4FBK A;  2WDF A;  4KBP A;  4V0X A;  1T70 A;  2IE4 C;  1AUI A;  2BQ8 X;  3DSC A;  5DNY A;  2BCD A;  1UF3 A;  2HY1 A;  2KKN A;  3N5U A; 
#chains in the Genus database with same CATH homology
 3RL3 A;  5JJT A;  3H66 A;  4JA7 A;  4UT2 A;  3RL5 A;  5JPF A;  5INB A;  4Q7F A;  3H62 B;  3IVE A;  1V73 A;  4OR9 A;  2YEQ A;  2Z06 A;  3GVE A;  4H2I A;  1XZW A;  5J28 A;  2GJU A;  2NPP C;  4ZVZ A;  3LL8 A;  2IE3 C;  4TUG A;  1S70 A;  3KBP A;  3DW8 C;  4DT2 A;  5HPE A;  1U32 A;  1W24 A;  4O5G A;  3RL4 A;  3CK2 A;  4FBQ A;  2DXN A;  3C9F A;  1JK7 A;  3AV0 A;  3ZTV A;  2ZOA A;  2WDD A;  5F3W A;  1S3M A;  4DSY A;  1HPU A;  2YVT A;  1USH A;  2Q8U A;  1OI8 A;  4LU9 A;  1TCO A;  3JYF A;  1SU1 A;  3K7V C;  4ORC A;  2BDX A;  4H1S A;  3E0J A;  2A22 A;  4O43 A;  4HD0 A;  4ZX2 A;  4H1Y P;  4V0V A;  4O4K A;  4MP0 A;  5C1V A;  2P6B A;  4FCX A;  4MOV A;  3E7B A;  1KBP A;  3IB7 A;  1II7 A;  3H68 A;  3D03 A;  2DFJ A;  4UT3 B;  3RQZ A;  1G5B A;  2O8G A;  1WAO 1;  2QFR A;  1M63 A;  3QFM A;  1Z2X A;  4I5N C;  1S8E A;  1HP1 A;  2ZBM A;  3P71 C;  2JOG A;  3ICF A;  4NZV A;  1XM7 A;  2WDE A;  4LAC C;  1UTE A;  4LTY A;  4V0W A;  4F0Z A;  2O8A A;  1HO5 A;  2QFP A;  3QFK A;  4H2B A;  3QFN A;  3FLO A;  4J6O A;  4YKE A;  1MF8 A;  4M0V A;  2IAE C;  3TGH A;  1NNW A;  3THO B;  2R17 A;  2NYL C;  3IVD A;  3QFO A;  4KKZ A;  5B8I A;  1IT6 A;  3H69 A;  3H67 A;  1QFC A;  1WAR A;  3EGG A;  1S3N A;  3C5W C;  4DHL A;  1OIE A;  3H64 A;  3QG5 C;  3AUZ A;  3H61 A;  4H2G A;  4IL1 A;  4MOY A;  3H63 A;  3PSN A;  5GTU A;  5IOH A;  3EGH A;  1QHW A;  4FBW A;  3HVQ A;  1Z2W A;  1T71 A;  4ORB A;  3V4Y A;  2HYO A;  4O24 A;  2HYP A;  2USH A;  3THN A;  2AHD A;  2Z1A A;  2Z72 A;  4XPN A;  4IYP C;  2QJC A;  4B2O A;  3E7A A;  1S3L A;  3IB8 A;  1S95 A;  2WDC A;  4I5L C;  3K7W C;  4ORA A;  4G9J A;  4UT3 A;  5JPE A;  5EQV A;  2CV9 A;  2ZO9 B;  3H60 A;  4TUI A;  4WWL A;  2DXL A;  3ZU0 A;  2NXF A;  2XMO A;  1OID A;  3PSO A;  3DSD A;  4UWQ A;  3T1I A;  3FGA C;  2NYM C;  4JA9 A;  4H2F A;  1FJM A;  4FBK A;  2WDF A;  4KBP A;  4V0X A;  1T70 A;  2IE4 C;  1AUI A;  2BQ8 X;  3DSC A;  5DNY A;  2BCD A;  1UF3 A;  2HY1 A;  2KKN A;  3N5U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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