3RQZA

Crystal structure of metallophosphoesterase from sphaerobacter thermophilus
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
245
structure length
243
Chain Sequence
NAMRILIISDVHANLVALEAVLSDAGRVDDIWSLGDIVGYGPRPRECVELVRVLAPNISVIGNHDWACIGRLSLDNPVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPDAQRVTFHRVEYRIADTQAQMREAGLPESLVTRLAAGV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Sphaerobacter thermophilus
publication title Crystal structure of metallophosphoesterase from Sphaerobacter thermophilus
rcsb
molecule keywords Metallophosphoesterase
total genus 74
structure length 243
sequence length 245
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2011-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12850 Metallophos_2 Calcineurin-like phosphoesterase superfamily domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3rqzA00
3P71C 3H66A 2O8GA 4TUGA 1WARA 2CV9A 4IL1A 4JA7A 3DSDA 2O8AA 4LU9A 1Z2XA 2WDCA 2JOGA 1JK7A 4IYPC 2QFPA 1T71A 1TCOA 2BDXA 1S3LA 3IB8A 3IB7A 3H62B 4H2FA 1UF3A 4H1YP 5JPEA 1SU1A 2NYMC 3V4YA 3QFMA 1V73A 4ORBA 2IE4C 4UT3A 5F3WA 4MOYA 4FBKA 5JPFA 2GJUA 3H60A 4DSYA 3EGHA 2Q8UA 3TGHA 1OIEA 4UT2A 2AHDA 1S8EA 3PSNA 1II7A 2WDFA 4V0VA 4M0VA 1NNWA 2DFJA 4OR9A 3AV0A 4O43A 3DSCA 3AUZA 1UTEA 3RQZA 4YKEA 1QHWA 2WDDA 2USHA 4KBPA 2P6BA 1XZWA 2ZBMA 4KKZA 3DW8C 4XPNA 1HO5A 1S3NA 4O5GA 1S70A 3QFNA 1FJMA 1Z2WA 3H63A 5HPEA 2Z1AA 1U32A 4I5LC 3ICFA 1WAO1 3N5UA 3H69A 3T1IA 2KKNA 4G9JA 5C1VA 4ZVZA 3H64A 4DHLA 2NXFA 3H68A 3KBPA 1AUIA 4FCXA 1W24A 4Q7FA 4J6OA 4H2BA 3QG5C 2HYPA 4FBWA 1MF8A 3RL5A 3H67A 3PSOA 3FGAC 4H2IA 4HD0A 3GVEA 3EGGA 3QFOA 1XM7A 4H2GA 1T70A 2R17A 1USHA 3HVQA 4V0WA 2NYLC 3H61A 3JYFA 4TUIA 2XMOA 4ZX2A 4MOVA 1KBPA 4MP0A 5DNYA 2A22A 2IAEC 5EQVA 2HY1A 5INBA 2WDEA 4FBQA 1S95A 4B2OA 4F0ZA 4O24A 2HYOA 3IVDA 3RL3A 5J28A 4I5NC 4ORCA 3ZTVA 3LL8A 3E7BA 3THNA 5JJTA 3RL4A 2YVTA 1OI8A 2BQ8X 3K7VC 4NZVA 3ZU0A 5IOHA 3CK2A 1OIDA 3C9FA 4WWLA 1QFCA 2NPPC 4H1SA 2IE3C 4V0XA 3THOB 1HP1A 4O4KA 1M63A 1G5BA 2BCDA 3K7WC 4ORAA 4UWQA 5GTUA 3QFKA 4UT3B 4DT2A 4LACC 4JA9A 1S3MA 3E7AA 3C5WC 2QJCA 3IVEA 2QFRA 2Z06A 2Z72A 4LTYA 1HPUA 5B8IA 1IT6A
chains in the Genus database with same CATH superfamily
3P71C 3H66A 2O8GA 4TUGA 1WARA 2CV9A 4IL1A 4JA7A 3DSDA 2O8AA 4LU9A 1Z2XA 2WDCA 2JOGA 1JK7A 4IYPC 2QFPA 1T71A 1TCOA 2BDXA 1S3LA 3IB8A 3IB7A 3H62B 4H2FA 1UF3A 4H1YP 5JPEA 1SU1A 2NYMC 3V4YA 3QFMA 1V73A 4ORBA 2IE4C 4UT3A 5F3WA 4MOYA 4FBKA 5JPFA 2GJUA 3H60A 4DSYA 3EGHA 2Q8UA 3TGHA 1OIEA 4UT2A 2AHDA 1S8EA 3PSNA 1II7A 2WDFA 4V0VA 4M0VA 1NNWA 2DFJA 4OR9A 3AV0A 4O43A 3DSCA 3AUZA 1UTEA 3RQZA 4YKEA 1QHWA 2WDDA 2USHA 4KBPA 2P6BA 1XZWA 2ZBMA 4KKZA 3DW8C 4XPNA 1HO5A 3D03A 1S3NA 4O5GA 1S70A 3QFNA 1FJMA 1Z2WA 2ZO9B 3H63A 5HPEA 2Z1AA 1U32A 4I5LC 3ICFA 1WAO1 3N5UA 3H69A 3T1IA 2KKNA 2YEQA 4G9JA 4ZVZA 5C1VA 3H64A 4DHLA 2NXFA 3H68A 3KBPA 1AUIA 4FCXA 1W24A 4Q7FA 4J6OA 4H2BA 3FLOA 3QG5C 2HYPA 4FBWA 1MF8A 3RL5A 3H67A 3PSOA 3FGAC 4H2IA 4HD0A 3GVEA 3EGGA 3QFOA 1XM7A 4H2GA 1T70A 2R17A 1USHA 3HVQA 4V0WA 2NYLC 3H61A 3JYFA 4TUIA 2XMOA 4ZX2A 4MOVA 1KBPA 4MP0A 5DNYA 2A22A 2IAEC 5EQVA 2HY1A 5INBA 2WDEA 4FBQA 1S95A 4B2OA 4F0ZA 4O24A 2HYOA 3IVDA 3RL3A 5J28A 4I5NC 4ORCA 3ZTVA 2DXNA 3LL8A 3E7BA 3THNA 5JJTA 3RL4A 2YVTA 1OI8A 2BQ8X 3K7VC 4NZVA 3ZU0A 5IOHA 3CK2A 1OIDA 3C9FA 4WWLA 1QFCA 2NPPC 4H1SA 2IE3C 4V0XA 3THOB 1HP1A 4O4KA 1M63A 3E0JA 1G5BA 2BCDA 3K7WC 4ORAA 4UWQA 5GTUA 3QFKA 4UT3B 2DXLA 4DT2A 4LACC 4JA9A 1S3MA 3E7AA 3C5WC 2QJCA 3IVEA 2QFRA 2Z06A 2Z72A 2ZOAA 1HPUA 4LTYA 5B8IA 1IT6A
chains in the Genus database with same CATH topology
3P71C 3H66A 2O8GA 4TUGA 1WARA 2CV9A 4IL1A 4JA7A 3DSDA 2O8AA 4LU9A 1Z2XA 2WDCA 2JOGA 1JK7A 4IYPC 2QFPA 1T71A 1TCOA 2BDXA 1S3LA 3IB8A 3IB7A 3H62B 4H2FA 1UF3A 4H1YP 5JPEA 1SU1A 2NYMC 3V4YA 3QFMA 1V73A 4ORBA 2IE4C 4UT3A 5F3WA 4MOYA 4FBKA 5JPFA 2GJUA 3H60A 4DSYA 3EGHA 2Q8UA 3TGHA 1OIEA 4UT2A 2AHDA 1S8EA 3PSNA 1II7A 2WDFA 4V0VA 4M0VA 1NNWA 2DFJA 4OR9A 3AV0A 4O43A 3DSCA 3AUZA 1UTEA 3RQZA 4YKEA 1QHWA 2WDDA 2USHA 4KBPA 2P6BA 1XZWA 2ZBMA 4KKZA 3DW8C 4XPNA 1HO5A 3D03A 1S3NA 4O5GA 1S70A 3QFNA 1FJMA 1Z2WA 2ZO9B 3H63A 5HPEA 2Z1AA 1U32A 4I5LC 3ICFA 1WAO1 3N5UA 3H69A 3T1IA 2KKNA 2YEQA 4G9JA 4ZVZA 5C1VA 3H64A 4DHLA 2NXFA 3H68A 3KBPA 1AUIA 4FCXA 1W24A 4Q7FA 4J6OA 4H2BA 3FLOA 3QG5C 2HYPA 4FBWA 1MF8A 3RL5A 3H67A 3PSOA 3FGAC 4H2IA 4HD0A 3GVEA 3EGGA 3QFOA 1XM7A 4H2GA 1T70A 2R17A 1USHA 3HVQA 4V0WA 2NYLC 3H61A 3JYFA 4TUIA 2XMOA 4ZX2A 4MOVA 1KBPA 4MP0A 5DNYA 2A22A 2IAEC 5EQVA 2HY1A 5INBA 2WDEA 4FBQA 1S95A 4B2OA 4F0ZA 4O24A 2HYOA 3IVDA 3RL3A 5J28A 4I5NC 4ORCA 3ZTVA 2DXNA 3LL8A 3E7BA 3THNA 5JJTA 3RL4A 2YVTA 1OI8A 2BQ8X 3K7VC 4NZVA 3ZU0A 5IOHA 3CK2A 1OIDA 3C9FA 4WWLA 1QFCA 2NPPC 4H1SA 2IE3C 4V0XA 3THOB 1HP1A 4O4KA 1M63A 3E0JA 1G5BA 2BCDA 3K7WC 4ORAA 4UWQA 5GTUA 3QFKA 4UT3B 2DXLA 4DT2A 4LACC 4JA9A 1S3MA 3E7AA 3C5WC 2QJCA 3IVEA 2QFRA 2Z06A 2Z72A 2ZOAA 1HPUA 4LTYA 5B8IA 1IT6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3P71 C;  3H66 A;  2O8G A;  4TUG A;  1WAR A;  2CV9 A;  4IL1 A;  4JA7 A;  3DSD A;  2O8A A;  4LU9 A;  1Z2X A;  2WDC A;  2JOG A;  1JK7 A;  4IYP C;  2QFP A;  1T71 A;  1TCO A;  2BDX A;  1S3L A;  3IB8 A;  3IB7 A;  3H62 B;  4H2F A;  1UF3 A;  4H1Y P;  5JPE A;  1SU1 A;  2NYM C;  3V4Y A;  3QFM A;  1V73 A;  4ORB A;  2IE4 C;  4UT3 A;  5F3W A;  4MOY A;  4FBK A;  5JPF A;  2GJU A;  3H60 A;  4DSY A;  3EGH A;  2Q8U A;  3TGH A;  1OIE A;  4UT2 A;  2AHD A;  1S8E A;  3PSN A;  1II7 A;  2WDF A;  4V0V A;  4M0V A;  1NNW A;  2DFJ A;  4OR9 A;  3AV0 A;  4O43 A;  3DSC A;  3AUZ A;  1UTE A;  3RQZ A;  4YKE A;  1QHW A;  2WDD A;  2USH A;  4KBP A;  2P6B A;  1XZW A;  2ZBM A;  4KKZ A;  3DW8 C;  4XPN A;  1HO5 A;  1S3N A;  4O5G A;  1S70 A;  3QFN A;  1FJM A;  1Z2W A;  3H63 A;  5HPE A;  2Z1A A;  1U32 A;  4I5L C;  3ICF A;  1WAO 1;  3N5U A;  3H69 A;  3T1I A;  2KKN A;  4G9J A;  5C1V A;  4ZVZ A;  3H64 A;  4DHL A;  2NXF A;  3H68 A;  3KBP A;  1AUI A;  4FCX A;  1W24 A;  4Q7F A;  4J6O A;  4H2B A;  3QG5 C;  2HYP A;  4FBW A;  1MF8 A;  3RL5 A;  3H67 A;  3PSO A;  3FGA C;  4H2I A;  4HD0 A;  3GVE A;  3EGG A;  3QFO A;  1XM7 A;  4H2G A;  1T70 A;  2R17 A;  1USH A;  3HVQ A;  4V0W A;  2NYL C;  3H61 A;  3JYF A;  4TUI A;  2XMO A;  4ZX2 A;  4MOV A;  1KBP A;  4MP0 A;  5DNY A;  2A22 A;  2IAE C;  5EQV A;  2HY1 A;  5INB A;  2WDE A;  4FBQ A;  1S95 A;  4B2O A;  4F0Z A;  4O24 A;  2HYO A;  3IVD A;  3RL3 A;  5J28 A;  4I5N C;  4ORC A;  3ZTV A;  3LL8 A;  3E7B A;  3THN A;  5JJT A;  3RL4 A;  2YVT A;  1OI8 A;  2BQ8 X;  3K7V C;  4NZV A;  3ZU0 A;  5IOH A;  3CK2 A;  1OID A;  3C9F A;  4WWL A;  1QFC A;  2NPP C;  4H1S A;  2IE3 C;  4V0X A;  3THO B;  1HP1 A;  4O4K A;  1M63 A;  1G5B A;  2BCD A;  3K7W C;  4ORA A;  4UWQ A;  5GTU A;  3QFK A;  4UT3 B;  4DT2 A;  4LAC C;  4JA9 A;  1S3M A;  3E7A A;  3C5W C;  2QJC A;  3IVE A;  2QFR A;  2Z06 A;  2Z72 A;  4LTY A;  1HPU A;  5B8I A;  1IT6 A; 
#chains in the Genus database with same CATH topology
 3P71 C;  3H66 A;  2O8G A;  4TUG A;  1WAR A;  2CV9 A;  4IL1 A;  4JA7 A;  3DSD A;  2O8A A;  4LU9 A;  1Z2X A;  2WDC A;  2JOG A;  1JK7 A;  4IYP C;  2QFP A;  1T71 A;  1TCO A;  2BDX A;  1S3L A;  3IB8 A;  3IB7 A;  3H62 B;  4H2F A;  1UF3 A;  4H1Y P;  5JPE A;  1SU1 A;  2NYM C;  3V4Y A;  3QFM A;  1V73 A;  4ORB A;  2IE4 C;  4UT3 A;  5F3W A;  4MOY A;  4FBK A;  5JPF A;  2GJU A;  3H60 A;  4DSY A;  3EGH A;  2Q8U A;  3TGH A;  1OIE A;  4UT2 A;  2AHD A;  1S8E A;  3PSN A;  1II7 A;  2WDF A;  4V0V A;  4M0V A;  1NNW A;  2DFJ A;  4OR9 A;  3AV0 A;  4O43 A;  3DSC A;  3AUZ A;  1UTE A;  3RQZ A;  4YKE A;  1QHW A;  2WDD A;  2USH A;  4KBP A;  2P6B A;  1XZW A;  2ZBM A;  4KKZ A;  3DW8 C;  4XPN A;  1HO5 A;  3D03 A;  1S3N A;  4O5G A;  1S70 A;  3QFN A;  1FJM A;  1Z2W A;  2ZO9 B;  3H63 A;  5HPE A;  2Z1A A;  1U32 A;  4I5L C;  3ICF A;  1WAO 1;  3N5U A;  3H69 A;  3T1I A;  2KKN A;  2YEQ A;  4G9J A;  4ZVZ A;  5C1V A;  3H64 A;  4DHL A;  2NXF A;  3H68 A;  3KBP A;  1AUI A;  4FCX A;  1W24 A;  4Q7F A;  4J6O A;  4H2B A;  3FLO A;  3QG5 C;  2HYP A;  4FBW A;  1MF8 A;  3RL5 A;  3H67 A;  3PSO A;  3FGA C;  4H2I A;  4HD0 A;  3GVE A;  3EGG A;  3QFO A;  1XM7 A;  4H2G A;  1T70 A;  2R17 A;  1USH A;  3HVQ A;  4V0W A;  2NYL C;  3H61 A;  3JYF A;  4TUI A;  2XMO A;  4ZX2 A;  4MOV A;  1KBP A;  4MP0 A;  5DNY A;  2A22 A;  2IAE C;  5EQV A;  2HY1 A;  5INB A;  2WDE A;  4FBQ A;  1S95 A;  4B2O A;  4F0Z A;  4O24 A;  2HYO A;  3IVD A;  3RL3 A;  5J28 A;  4I5N C;  4ORC A;  3ZTV A;  2DXN A;  3LL8 A;  3E7B A;  3THN A;  5JJT A;  3RL4 A;  2YVT A;  1OI8 A;  2BQ8 X;  3K7V C;  4NZV A;  3ZU0 A;  5IOH A;  3CK2 A;  1OID A;  3C9F A;  4WWL A;  1QFC A;  2NPP C;  4H1S A;  2IE3 C;  4V0X A;  3THO B;  1HP1 A;  4O4K A;  1M63 A;  3E0J A;  1G5B A;  2BCD A;  3K7W C;  4ORA A;  4UWQ A;  5GTU A;  3QFK A;  4UT3 B;  2DXL A;  4DT2 A;  4LAC C;  4JA9 A;  1S3M A;  3E7A A;  3C5W C;  2QJC A;  3IVE A;  2QFR A;  2Z06 A;  2Z72 A;  2ZOA A;  1HPU A;  4LTY A;  5B8I A;  1IT6 A; 
#chains in the Genus database with same CATH homology
 3P71 C;  3H66 A;  2O8G A;  4TUG A;  1WAR A;  2CV9 A;  4IL1 A;  4JA7 A;  3DSD A;  2O8A A;  4LU9 A;  1Z2X A;  2WDC A;  2JOG A;  1JK7 A;  4IYP C;  2QFP A;  1T71 A;  1TCO A;  2BDX A;  1S3L A;  3IB8 A;  3IB7 A;  3H62 B;  4H2F A;  1UF3 A;  4H1Y P;  5JPE A;  1SU1 A;  2NYM C;  3V4Y A;  3QFM A;  1V73 A;  4ORB A;  2IE4 C;  4UT3 A;  5F3W A;  4MOY A;  4FBK A;  5JPF A;  2GJU A;  3H60 A;  4DSY A;  3EGH A;  2Q8U A;  3TGH A;  1OIE A;  4UT2 A;  2AHD A;  1S8E A;  3PSN A;  1II7 A;  2WDF A;  4V0V A;  4M0V A;  1NNW A;  2DFJ A;  4OR9 A;  3AV0 A;  4O43 A;  3DSC A;  3AUZ A;  1UTE A;  3RQZ A;  4YKE A;  1QHW A;  2WDD A;  2USH A;  4KBP A;  2P6B A;  1XZW A;  2ZBM A;  4KKZ A;  3DW8 C;  4XPN A;  1HO5 A;  3D03 A;  1S3N A;  4O5G A;  1S70 A;  3QFN A;  1FJM A;  1Z2W A;  2ZO9 B;  3H63 A;  5HPE A;  2Z1A A;  1U32 A;  4I5L C;  3ICF A;  1WAO 1;  3N5U A;  3H69 A;  3T1I A;  2KKN A;  2YEQ A;  4G9J A;  4ZVZ A;  5C1V A;  3H64 A;  4DHL A;  2NXF A;  3H68 A;  3KBP A;  1AUI A;  4FCX A;  1W24 A;  4Q7F A;  4J6O A;  4H2B A;  3FLO A;  3QG5 C;  2HYP A;  4FBW A;  1MF8 A;  3RL5 A;  3H67 A;  3PSO A;  3FGA C;  4H2I A;  4HD0 A;  3GVE A;  3EGG A;  3QFO A;  1XM7 A;  4H2G A;  1T70 A;  2R17 A;  1USH A;  3HVQ A;  4V0W A;  2NYL C;  3H61 A;  3JYF A;  4TUI A;  2XMO A;  4ZX2 A;  4MOV A;  1KBP A;  4MP0 A;  5DNY A;  2A22 A;  2IAE C;  5EQV A;  2HY1 A;  5INB A;  2WDE A;  4FBQ A;  1S95 A;  4B2O A;  4F0Z A;  4O24 A;  2HYO A;  3IVD A;  3RL3 A;  5J28 A;  4I5N C;  4ORC A;  3ZTV A;  2DXN A;  3LL8 A;  3E7B A;  3THN A;  5JJT A;  3RL4 A;  2YVT A;  1OI8 A;  2BQ8 X;  3K7V C;  4NZV A;  3ZU0 A;  5IOH A;  3CK2 A;  1OID A;  3C9F A;  4WWL A;  1QFC A;  2NPP C;  4H1S A;  2IE3 C;  4V0X A;  3THO B;  1HP1 A;  4O4K A;  1M63 A;  3E0J A;  1G5B A;  2BCD A;  3K7W C;  4ORA A;  4UWQ A;  5GTU A;  3QFK A;  4UT3 B;  2DXL A;  4DT2 A;  4LAC C;  4JA9 A;  1S3M A;  3E7A A;  3C5W C;  2QJC A;  3IVE A;  2QFR A;  2Z06 A;  2Z72 A;  2ZOA A;  1HPU A;  4LTY A;  5B8I A;  1IT6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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