3RQZA

Crystal structure of metallophosphoesterase from sphaerobacter thermophilus
Total Genus 74
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
245
structure length
243
Chain Sequence
NAMRILIISDVHANLVALEAVLSDAGRVDDIWSLGDIVGYGPRPRECVELVRVLAPNISVIGNHDWACIGRLSLDNPVARFASYWTTMQLQAEHLQYLESLPNRMIDGDWTVVHGSPRHPIWEYIYNARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQPRDGDPRASYAIFEPDAQRVTFHRVEYRIADTQAQMREAGLPESLVTRLAAGV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of metallophosphoesterase from Sphaerobacter thermophilus
rcsb
source organism Sphaerobacter thermophilus
molecule tags Hydrolase
molecule keywords Metallophosphoesterase
total genus 74
structure length 243
sequence length 245
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2011-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF12850 Metallophos_2 Calcineurin-like phosphoesterase superfamily domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3rqzA00
4DSYA 3QG5C 2IE4C 4UT2A 4O24A 3RL5A 3QFKA 4F0ZA 2XMOA 5B8IA 4I5LC 1HO5A 2BCDA 2WDFA 5F3WA 5DNYA 4H2GA 4V0XA 2P6BA 2HY1A 1S8EA 5JPFA 1NNWA 4V0WA 1QFCA 2CV9A 4MP0A 3IB7A 4ORCA 4I5NC 2Z72A 3RQZA 3RL3A 3DSDA 3IB8A 3QFMA 2IE3C 4UWQA 4Q7FA 1T71A 5J28A 3LL8A 4DT2A 2WDDA 4H2BA 3DSCA 2USHA 1XZWA 3TGHA 2NPPC 4LTYA 1WARA 3V4YA 4FBQA 5IOHA 2HYPA 4O5GA 2NYLC 1KBPA 2O8AA 3H69A 3H62B 2Z1AA 3GVEA 3KBPA 4KBPA 5EQVA 4ZVZA 4ORBA 1S3NA 2A22A 2KKNA 2YVTA 2O8GA 3ZTVA 4KKZA 1MF8A 2JOGA 1V73A 1OIEA 3E7BA 3ICFA 4YKEA 4FBWA 5JPEA 3PSOA 2QFRA 1S95A 4WWLA 4IL1A 3H68A 1TCOA 3P71C 3AUZA 4TUIA 2HYOA 1II7A 3RL4A 1IT6A 5C1VA 2QJCA 3K7VC 3C9FA 4H1YP 2Q8UA 3H60A 3HVQA 2Z06A 3PSNA 1UTEA 2AHDA 1Z2XA 3AV0A 4ZX2A 2DFJA 1M63A 1OI8A 2BDXA 1W24A 3ZU0A 4H2FA 5JJTA 1QHWA 3H63A 4HD0A 3IVEA 1HPUA 1JK7A 4FBKA 3THNA 4H1SA 2WDEA 1SU1A 4OR9A 1U32A 4MOYA 1S3LA 4O4KA 4H2IA 1XM7A 4UT3B 4LACC 3DW8C 3EGHA 3FGAC 1Z2WA 2BQ8X 1HP1A 3THOB 3C5WC 5INBA 1S3MA 2ZBMA 4XPNA 2GJUA 2NXFA 3H67A 3QFNA 4UT3A 4IYPC 3IVDA 4DHLA 5HPEA 4M0VA 4B2OA 1AUIA 1WAO1 3N5UA 4O43A 1S70A 1UF3A 2R17A 4MOVA 5GTUA 2QFPA 2WDCA 3H66A 4NZVA 3JYFA 4LU9A 3H64A 4JA7A 3T1IA 3EGGA 3E7AA 4JA9A 1FJMA 3QFOA 4FCXA 4J6OA 2IAEC 1T70A 3CK2A 1G5BA 2NYMC 1OIDA 4TUGA 4V0VA 1USHA 4ORAA 3K7WC 4G9JA 3H61A
chains in the Genus database with same CATH superfamily
4DSYA 3QG5C 2IE4C 4UT2A 4O24A 3RL5A 3QFKA 4F0ZA 2XMOA 5B8IA 4I5LC 1HO5A 2BCDA 2WDFA 5F3WA 5DNYA 4H2GA 4V0XA 2P6BA 2HY1A 1S8EA 5JPFA 1NNWA 4V0WA 1QFCA 2CV9A 4MP0A 3IB7A 4ORCA 3E0JA 4I5NC 2Z72A 3RQZA 3RL3A 3DSDA 3IB8A 3QFMA 2IE3C 4UWQA 4Q7FA 1T71A 5J28A 3LL8A 4DT2A 2WDDA 4H2BA 3DSCA 2USHA 1XZWA 3TGHA 2NPPC 4LTYA 1WARA 3V4YA 4FBQA 2YEQA 5IOHA 2HYPA 4O5GA 2NYLC 1KBPA 2O8AA 3H69A 3H62B 2Z1AA 3GVEA 3KBPA 4KBPA 5EQVA 4ZVZA 4ORBA 1S3NA 2A22A 2KKNA 2YVTA 2O8GA 3ZTVA 4KKZA 1MF8A 2JOGA 1V73A 1OIEA 3E7BA 3ICFA 4YKEA 4FBWA 5JPEA 3PSOA 2QFRA 1S95A 4WWLA 4IL1A 3FLOA 3H68A 1TCOA 3P71C 3AUZA 4TUIA 2HYOA 1II7A 2ZO9B 3RL4A 1IT6A 5C1VA 2QJCA 3K7VC 3C9FA 4H1YP 2Q8UA 3H60A 3HVQA 2Z06A 3PSNA 1UTEA 2AHDA 1Z2XA 3AV0A 4ZX2A 2DFJA 1M63A 1OI8A 2BDXA 1W24A 2DXLA 3ZU0A 4H2FA 5JJTA 1QHWA 3H63A 4HD0A 3IVEA 1HPUA 1JK7A 4FBKA 3THNA 2ZOAA 4H1SA 2WDEA 1SU1A 4OR9A 1U32A 4MOYA 1S3LA 4O4KA 4H2IA 1XM7A 4UT3B 4LACC 3DW8C 3EGHA 3FGAC 1Z2WA 2BQ8X 3D03A 1HP1A 3THOB 3C5WC 5INBA 1S3MA 2ZBMA 4XPNA 2GJUA 2NXFA 3H67A 3QFNA 4UT3A 4IYPC 3IVDA 4DHLA 5HPEA 4M0VA 4B2OA 1AUIA 1WAO1 3N5UA 4O43A 1S70A 1UF3A 2R17A 4MOVA 5GTUA 2QFPA 2WDCA 2DXNA 3H66A 4NZVA 3JYFA 4LU9A 3H64A 4JA7A 3T1IA 3EGGA 3E7AA 4JA9A 1FJMA 3QFOA 4FCXA 4J6OA 2IAEC 1T70A 3CK2A 1G5BA 2NYMC 1OIDA 4TUGA 4V0VA 1USHA 4ORAA 3K7WC 4G9JA 3H61A
chains in the Genus database with same CATH topology
4DSYA 3QG5C 2IE4C 4UT2A 4O24A 3RL5A 3QFKA 4F0ZA 2XMOA 5B8IA 4I5LC 1HO5A 2BCDA 2WDFA 5F3WA 5DNYA 4H2GA 4V0XA 2P6BA 2HY1A 1S8EA 5JPFA 1NNWA 4V0WA 1QFCA 2CV9A 4MP0A 3IB7A 4ORCA 3E0JA 4I5NC 2Z72A 3RQZA 3RL3A 3DSDA 3IB8A 3QFMA 2IE3C 4UWQA 4Q7FA 1T71A 5J28A 3LL8A 4DT2A 2WDDA 4H2BA 3DSCA 2USHA 1XZWA 3TGHA 2NPPC 4LTYA 1WARA 3V4YA 4FBQA 2YEQA 5IOHA 2HYPA 4O5GA 2NYLC 1KBPA 2O8AA 3H69A 3H62B 2Z1AA 3GVEA 3KBPA 4KBPA 5EQVA 4ZVZA 4ORBA 1S3NA 2A22A 2KKNA 2YVTA 2O8GA 3ZTVA 4KKZA 1MF8A 2JOGA 1V73A 1OIEA 3E7BA 3ICFA 4YKEA 4FBWA 5JPEA 3PSOA 2QFRA 1S95A 4WWLA 4IL1A 3FLOA 3H68A 1TCOA 3P71C 3AUZA 4TUIA 2HYOA 1II7A 2ZO9B 3RL4A 1IT6A 5C1VA 2QJCA 3K7VC 3C9FA 4H1YP 2Q8UA 3H60A 3HVQA 2Z06A 3PSNA 1UTEA 2AHDA 1Z2XA 3AV0A 4ZX2A 2DFJA 1M63A 1OI8A 2BDXA 1W24A 2DXLA 3ZU0A 4H2FA 5JJTA 1QHWA 3H63A 4HD0A 3IVEA 1HPUA 1JK7A 4FBKA 3THNA 2ZOAA 4H1SA 2WDEA 1SU1A 4OR9A 1U32A 4MOYA 1S3LA 4O4KA 4H2IA 1XM7A 4UT3B 4LACC 3DW8C 3EGHA 3FGAC 1Z2WA 2BQ8X 3D03A 1HP1A 3THOB 3C5WC 5INBA 1S3MA 2ZBMA 4XPNA 2GJUA 2NXFA 3H67A 3QFNA 4UT3A 4IYPC 3IVDA 4DHLA 5HPEA 4M0VA 4B2OA 1AUIA 1WAO1 3N5UA 4O43A 1S70A 1UF3A 2R17A 4MOVA 5GTUA 2QFPA 2WDCA 2DXNA 3H66A 4NZVA 3JYFA 4LU9A 3H64A 4JA7A 3T1IA 3EGGA 3E7AA 4JA9A 1FJMA 3QFOA 4FCXA 4J6OA 2IAEC 1T70A 3CK2A 1G5BA 2NYMC 1OIDA 4TUGA 4V0VA 1USHA 4ORAA 3K7WC 4G9JA 3H61A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4DSY A;  3QG5 C;  2IE4 C;  4UT2 A;  4O24 A;  3RL5 A;  3QFK A;  4F0Z A;  2XMO A;  5B8I A;  4I5L C;  1HO5 A;  2BCD A;  2WDF A;  5F3W A;  5DNY A;  4H2G A;  4V0X A;  2P6B A;  2HY1 A;  1S8E A;  5JPF A;  1NNW A;  4V0W A;  1QFC A;  2CV9 A;  4MP0 A;  3IB7 A;  4ORC A;  4I5N C;  2Z72 A;  3RQZ A;  3RL3 A;  3DSD A;  3IB8 A;  3QFM A;  2IE3 C;  4UWQ A;  4Q7F A;  1T71 A;  5J28 A;  3LL8 A;  4DT2 A;  2WDD A;  4H2B A;  3DSC A;  2USH A;  1XZW A;  3TGH A;  2NPP C;  4LTY A;  1WAR A;  3V4Y A;  4FBQ A;  5IOH A;  2HYP A;  4O5G A;  2NYL C;  1KBP A;  2O8A A;  3H69 A;  3H62 B;  2Z1A A;  3GVE A;  3KBP A;  4KBP A;  5EQV A;  4ZVZ A;  4ORB A;  1S3N A;  2A22 A;  2KKN A;  2YVT A;  2O8G A;  3ZTV A;  4KKZ A;  1MF8 A;  2JOG A;  1V73 A;  1OIE A;  3E7B A;  3ICF A;  4YKE A;  4FBW A;  5JPE A;  3PSO A;  2QFR A;  1S95 A;  4WWL A;  4IL1 A;  3H68 A;  1TCO A;  3P71 C;  3AUZ A;  4TUI A;  2HYO A;  1II7 A;  3RL4 A;  1IT6 A;  5C1V A;  2QJC A;  3K7V C;  3C9F A;  4H1Y P;  2Q8U A;  3H60 A;  3HVQ A;  2Z06 A;  3PSN A;  1UTE A;  2AHD A;  1Z2X A;  3AV0 A;  4ZX2 A;  2DFJ A;  1M63 A;  1OI8 A;  2BDX A;  1W24 A;  3ZU0 A;  4H2F A;  5JJT A;  1QHW A;  3H63 A;  4HD0 A;  3IVE A;  1HPU A;  1JK7 A;  4FBK A;  3THN A;  4H1S A;  2WDE A;  1SU1 A;  4OR9 A;  1U32 A;  4MOY A;  1S3L A;  4O4K A;  4H2I A;  1XM7 A;  4UT3 B;  4LAC C;  3DW8 C;  3EGH A;  3FGA C;  1Z2W A;  2BQ8 X;  1HP1 A;  3THO B;  3C5W C;  5INB A;  1S3M A;  2ZBM A;  4XPN A;  2GJU A;  2NXF A;  3H67 A;  3QFN A;  4UT3 A;  4IYP C;  3IVD A;  4DHL A;  5HPE A;  4M0V A;  4B2O A;  1AUI A;  1WAO 1;  3N5U A;  4O43 A;  1S70 A;  1UF3 A;  2R17 A;  4MOV A;  5GTU A;  2QFP A;  2WDC A;  3H66 A;  4NZV A;  3JYF A;  4LU9 A;  3H64 A;  4JA7 A;  3T1I A;  3EGG A;  3E7A A;  4JA9 A;  1FJM A;  3QFO A;  4FCX A;  4J6O A;  2IAE C;  1T70 A;  3CK2 A;  1G5B A;  2NYM C;  1OID A;  4TUG A;  4V0V A;  1USH A;  4ORA A;  3K7W C;  4G9J A;  3H61 A; 
#chains in the Genus database with same CATH topology
 4DSY A;  3QG5 C;  2IE4 C;  4UT2 A;  4O24 A;  3RL5 A;  3QFK A;  4F0Z A;  2XMO A;  5B8I A;  4I5L C;  1HO5 A;  2BCD A;  2WDF A;  5F3W A;  5DNY A;  4H2G A;  4V0X A;  2P6B A;  2HY1 A;  1S8E A;  5JPF A;  1NNW A;  4V0W A;  1QFC A;  2CV9 A;  4MP0 A;  3IB7 A;  4ORC A;  3E0J A;  4I5N C;  2Z72 A;  3RQZ A;  3RL3 A;  3DSD A;  3IB8 A;  3QFM A;  2IE3 C;  4UWQ A;  4Q7F A;  1T71 A;  5J28 A;  3LL8 A;  4DT2 A;  2WDD A;  4H2B A;  3DSC A;  2USH A;  1XZW A;  3TGH A;  2NPP C;  4LTY A;  1WAR A;  3V4Y A;  4FBQ A;  2YEQ A;  5IOH A;  2HYP A;  4O5G A;  2NYL C;  1KBP A;  2O8A A;  3H69 A;  3H62 B;  2Z1A A;  3GVE A;  3KBP A;  4KBP A;  5EQV A;  4ZVZ A;  4ORB A;  1S3N A;  2A22 A;  2KKN A;  2YVT A;  2O8G A;  3ZTV A;  4KKZ A;  1MF8 A;  2JOG A;  1V73 A;  1OIE A;  3E7B A;  3ICF A;  4YKE A;  4FBW A;  5JPE A;  3PSO A;  2QFR A;  1S95 A;  4WWL A;  4IL1 A;  3FLO A;  3H68 A;  1TCO A;  3P71 C;  3AUZ A;  4TUI A;  2HYO A;  1II7 A;  2ZO9 B;  3RL4 A;  1IT6 A;  5C1V A;  2QJC A;  3K7V C;  3C9F A;  4H1Y P;  2Q8U A;  3H60 A;  3HVQ A;  2Z06 A;  3PSN A;  1UTE A;  2AHD A;  1Z2X A;  3AV0 A;  4ZX2 A;  2DFJ A;  1M63 A;  1OI8 A;  2BDX A;  1W24 A;  2DXL A;  3ZU0 A;  4H2F A;  5JJT A;  1QHW A;  3H63 A;  4HD0 A;  3IVE A;  1HPU A;  1JK7 A;  4FBK A;  3THN A;  2ZOA A;  4H1S A;  2WDE A;  1SU1 A;  4OR9 A;  1U32 A;  4MOY A;  1S3L A;  4O4K A;  4H2I A;  1XM7 A;  4UT3 B;  4LAC C;  3DW8 C;  3EGH A;  3FGA C;  1Z2W A;  2BQ8 X;  3D03 A;  1HP1 A;  3THO B;  3C5W C;  5INB A;  1S3M A;  2ZBM A;  4XPN A;  2GJU A;  2NXF A;  3H67 A;  3QFN A;  4UT3 A;  4IYP C;  3IVD A;  4DHL A;  5HPE A;  4M0V A;  4B2O A;  1AUI A;  1WAO 1;  3N5U A;  4O43 A;  1S70 A;  1UF3 A;  2R17 A;  4MOV A;  5GTU A;  2QFP A;  2WDC A;  2DXN A;  3H66 A;  4NZV A;  3JYF A;  4LU9 A;  3H64 A;  4JA7 A;  3T1I A;  3EGG A;  3E7A A;  4JA9 A;  1FJM A;  3QFO A;  4FCX A;  4J6O A;  2IAE C;  1T70 A;  3CK2 A;  1G5B A;  2NYM C;  1OID A;  4TUG A;  4V0V A;  1USH A;  4ORA A;  3K7W C;  4G9J A;  3H61 A; 
#chains in the Genus database with same CATH homology
 4DSY A;  3QG5 C;  2IE4 C;  4UT2 A;  4O24 A;  3RL5 A;  3QFK A;  4F0Z A;  2XMO A;  5B8I A;  4I5L C;  1HO5 A;  2BCD A;  2WDF A;  5F3W A;  5DNY A;  4H2G A;  4V0X A;  2P6B A;  2HY1 A;  1S8E A;  5JPF A;  1NNW A;  4V0W A;  1QFC A;  2CV9 A;  4MP0 A;  3IB7 A;  4ORC A;  3E0J A;  4I5N C;  2Z72 A;  3RQZ A;  3RL3 A;  3DSD A;  3IB8 A;  3QFM A;  2IE3 C;  4UWQ A;  4Q7F A;  1T71 A;  5J28 A;  3LL8 A;  4DT2 A;  2WDD A;  4H2B A;  3DSC A;  2USH A;  1XZW A;  3TGH A;  2NPP C;  4LTY A;  1WAR A;  3V4Y A;  4FBQ A;  2YEQ A;  5IOH A;  2HYP A;  4O5G A;  2NYL C;  1KBP A;  2O8A A;  3H69 A;  3H62 B;  2Z1A A;  3GVE A;  3KBP A;  4KBP A;  5EQV A;  4ZVZ A;  4ORB A;  1S3N A;  2A22 A;  2KKN A;  2YVT A;  2O8G A;  3ZTV A;  4KKZ A;  1MF8 A;  2JOG A;  1V73 A;  1OIE A;  3E7B A;  3ICF A;  4YKE A;  4FBW A;  5JPE A;  3PSO A;  2QFR A;  1S95 A;  4WWL A;  4IL1 A;  3FLO A;  3H68 A;  1TCO A;  3P71 C;  3AUZ A;  4TUI A;  2HYO A;  1II7 A;  2ZO9 B;  3RL4 A;  1IT6 A;  5C1V A;  2QJC A;  3K7V C;  3C9F A;  4H1Y P;  2Q8U A;  3H60 A;  3HVQ A;  2Z06 A;  3PSN A;  1UTE A;  2AHD A;  1Z2X A;  3AV0 A;  4ZX2 A;  2DFJ A;  1M63 A;  1OI8 A;  2BDX A;  1W24 A;  2DXL A;  3ZU0 A;  4H2F A;  5JJT A;  1QHW A;  3H63 A;  4HD0 A;  3IVE A;  1HPU A;  1JK7 A;  4FBK A;  3THN A;  2ZOA A;  4H1S A;  2WDE A;  1SU1 A;  4OR9 A;  1U32 A;  4MOY A;  1S3L A;  4O4K A;  4H2I A;  1XM7 A;  4UT3 B;  4LAC C;  3DW8 C;  3EGH A;  3FGA C;  1Z2W A;  2BQ8 X;  3D03 A;  1HP1 A;  3THO B;  3C5W C;  5INB A;  1S3M A;  2ZBM A;  4XPN A;  2GJU A;  2NXF A;  3H67 A;  3QFN A;  4UT3 A;  4IYP C;  3IVD A;  4DHL A;  5HPE A;  4M0V A;  4B2O A;  1AUI A;  1WAO 1;  3N5U A;  4O43 A;  1S70 A;  1UF3 A;  2R17 A;  4MOV A;  5GTU A;  2QFP A;  2WDC A;  2DXN A;  3H66 A;  4NZV A;  3JYF A;  4LU9 A;  3H64 A;  4JA7 A;  3T1I A;  3EGG A;  3E7A A;  4JA9 A;  1FJM A;  3QFO A;  4FCX A;  4J6O A;  2IAE C;  1T70 A;  3CK2 A;  1G5B A;  2NYM C;  1OID A;  4TUG A;  4V0V A;  1USH A;  4ORA A;  3K7W C;  4G9J A;  3H61 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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