2BQ8X

Crystal structure of human purple acid phosphatase with an inhibitory conformation of the repression loop
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
304
structure length
304
Chain Sequence
b'ATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRRARP'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of Recombinant Human Purple Acid Phosphatase with and without an Inhibitory Conformation of the Repression Loop.
pubmed doi rcsb
molecule keywords TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
source organism Homo sapiens
molecule tags Hydrolase
total genus 103
structure length 304
sequence length 304
ec nomenclature ec 3.1.3.2: Acid phosphatase.
pdb deposition date 2005-04-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2bq8X00
2Z06A 4LU9A 3QFNA 4MOYA 3IVEA 3CK2A 1FJMA 1OIDA 4MOVA 1W24A 4H1YP 1JK7A 3IB8A 1HPUA 2AHDA 3ICFA 2WDEA 2IAEC 1QHWA 3EGGA 4H1SA 2IE4C 4LACC 3H63A 4FBWA 2BCDA 2DFJA 4O24A 4O4KA 4V0VA 1TCOA 1OI8A 2BDXA 3PSOA 1MF8A 3H67A 3IVDA 3THOB 3H68A 3THNA 4H2BA 1QFCA 3IB7A 4IL1A 1Z2XA 3FGAC 3H62B 4ORCA 1OIEA 4ZX2A 4B2OA 4OR9A 2O8AA 3K7WC 2WDFA 4UWQA 4H2GA 3RL3A 1XM7A 4ORAA 2A22A 3ZTVA 5INBA 1S8EA 1USHA 4TUGA 1HP1A 1SU1A 2GJUA 1M63A 4JA9A 3E7AA 3AV0A 2HYPA 5J28A 3DSDA 4UT3A 4UT2A 1S3NA 3DSCA 4H2IA 4KKZA 1T70A 3HVQA 3H64A 1S3MA 2BQ8X 2ZBMA 4FBKA 3H66A 4UT3B 1II7A 4J6OA 1G5BA 4FCXA 2WDCA 1NNWA 5JPFA 4V0WA 4DT2A 2Z1AA 2JOGA 1UF3A 1S3LA 1UTEA 2QFRA 3E7BA 2P6BA 3TGHA 2HY1A 2R17A 4Q7FA 1WAO1 2QFPA 3PSNA 3H60A 4FBQA 1U32A 1WARA 2QJCA 3T1IA 5EQVA 2NYMC 5B8IA 1XZWA 3QFMA 4I5LC 3RL5A 1IT6A 3DW8C 3KBPA 3LL8A 3N5UA 3P71C 1Z2WA 3C9FA 2WDDA 4MP0A 4NZVA 1T71A 5C1VA 3H69A 2Q8UA 5HPEA 4XPNA 1AUIA 4HD0A 4ORBA 3GVEA 4H2FA 1KBPA 3RQZA 2NPPC 4I5NC 2XMOA 2KKNA 4G9JA 4IYPC 5DNYA 4YKEA 3EGHA 2CV9A 3JYFA 3QG5C 3H61A 5GTUA 4O5GA 3QFKA 2NXFA 3C5WC 2HYOA 1V73A 4O43A 4V0XA 2YVTA 4WWLA 4M0VA 1HO5A 4F0ZA 4LTYA 2IE3C 4DHLA 4DSYA 3AUZA 3ZU0A 1S70A 5JPEA 2USHA 4ZVZA 4KBPA 2NYLC 5IOHA 5JJTA 2O8GA 3V4YA 4TUIA 3RL4A 5F3WA 3K7VC 1S95A 3QFOA 4JA7A 2Z72A
chains in the Genus database with same CATH superfamily
2Z06A 4LU9A 3QFNA 4MOYA 2DXNA 3IVEA 3CK2A 1FJMA 1OIDA 4MOVA 1W24A 4H1YP 1JK7A 3IB8A 1HPUA 2AHDA 3ICFA 2WDEA 2IAEC 1QHWA 3EGGA 4H1SA 2IE4C 4LACC 3H63A 4FBWA 2BCDA 2DFJA 4O24A 4O4KA 2YEQA 4V0VA 1TCOA 1OI8A 2BDXA 3PSOA 1MF8A 3H67A 3IVDA 3THOB 3H68A 3THNA 4H2BA 1QFCA 3IB7A 4IL1A 1Z2XA 3FGAC 3H62B 4ORCA 1OIEA 4ZX2A 4B2OA 4OR9A 2O8AA 3K7WC 2WDFA 4UWQA 4H2GA 3RL3A 1XM7A 4ORAA 2A22A 3ZTVA 5INBA 1S8EA 2ZOAA 1USHA 3QFOA 4TUGA 1HP1A 1SU1A 2GJUA 1M63A 4JA9A 3E7AA 3AV0A 2HYPA 5J28A 3DSDA 4UT3A 4UT2A 1S3NA 3DSCA 3D03A 4H2IA 4KKZA 1T70A 3HVQA 3H64A 1S3MA 2BQ8X 2ZBMA 4FBKA 3H66A 4UT3B 1II7A 4J6OA 1G5BA 4FCXA 2WDCA 1NNWA 5JPFA 4V0WA 4DT2A 2Z1AA 2JOGA 1UF3A 1S3LA 1UTEA 2QFRA 3E7BA 2P6BA 3TGHA 2HY1A 2R17A 4Q7FA 1WAO1 2QFPA 3PSNA 3H60A 4FBQA 1U32A 1WARA 2QJCA 3T1IA 5EQVA 2NYMC 5B8IA 1XZWA 3QFMA 4I5LC 3RL5A 1IT6A 3DW8C 3KBPA 3LL8A 3N5UA 3P71C 1Z2WA 3C9FA 2WDDA 4MP0A 4NZVA 1T71A 5C1VA 3H69A 2Q8UA 5HPEA 4XPNA 1AUIA 4HD0A 4ORBA 3GVEA 4H2FA 1KBPA 3RQZA 2NPPC 4I5NC 2XMOA 2KKNA 4G9JA 4IYPC 5DNYA 4YKEA 3EGHA 2CV9A 3JYFA 3QG5C 2DXLA 3H61A 4O5GA 5GTUA 3QFKA 2ZO9B 2NXFA 3C5WC 2HYOA 1V73A 3FLOA 4O43A 4V0XA 2YVTA 4WWLA 4M0VA 1HO5A 4F0ZA 4LTYA 2IE3C 4DHLA 4DSYA 3AUZA 3ZU0A 1S70A 5JPEA 2USHA 4ZVZA 4KBPA 2NYLC 5IOHA 5JJTA 2O8GA 3V4YA 4TUIA 3RL4A 5F3WA 3K7VC 1S95A 3E0JA 4JA7A 2Z72A
chains in the Genus database with same CATH topology
2Z06A 4LU9A 3QFNA 4MOYA 2DXNA 3IVEA 3CK2A 1FJMA 1OIDA 4MOVA 1W24A 4H1YP 1JK7A 3IB8A 1HPUA 2AHDA 3ICFA 2WDEA 2IAEC 1QHWA 3EGGA 4H1SA 2IE4C 4LACC 3H63A 4FBWA 2BCDA 2DFJA 4O24A 4O4KA 2YEQA 4V0VA 1TCOA 1OI8A 2BDXA 3PSOA 1MF8A 3H67A 3IVDA 3THOB 3H68A 3THNA 4H2BA 1QFCA 3IB7A 4IL1A 1Z2XA 3FGAC 3H62B 4ORCA 1OIEA 4ZX2A 4B2OA 4OR9A 2O8AA 3K7WC 2WDFA 4UWQA 4H2GA 3RL3A 1XM7A 4ORAA 2A22A 3ZTVA 5INBA 1S8EA 2ZOAA 1USHA 3QFOA 4TUGA 1HP1A 1SU1A 2GJUA 1M63A 4JA9A 3E7AA 3AV0A 2HYPA 5J28A 3DSDA 4UT3A 4UT2A 1S3NA 3DSCA 3D03A 4H2IA 4KKZA 1T70A 3HVQA 3H64A 1S3MA 2BQ8X 2ZBMA 4FBKA 3H66A 4UT3B 1II7A 4J6OA 1G5BA 4FCXA 2WDCA 1NNWA 5JPFA 4V0WA 4DT2A 2Z1AA 2JOGA 1UF3A 1S3LA 1UTEA 2QFRA 3E7BA 2P6BA 3TGHA 2HY1A 2R17A 4Q7FA 1WAO1 2QFPA 3PSNA 3H60A 4FBQA 1U32A 1WARA 2QJCA 3T1IA 5EQVA 2NYMC 5B8IA 1XZWA 3QFMA 4I5LC 3RL5A 1IT6A 3DW8C 3KBPA 3LL8A 3N5UA 3P71C 1Z2WA 3C9FA 2WDDA 4MP0A 4NZVA 1T71A 5C1VA 3H69A 2Q8UA 5HPEA 4XPNA 1AUIA 4HD0A 4ORBA 3GVEA 4H2FA 1KBPA 3RQZA 2NPPC 4I5NC 2XMOA 2KKNA 4G9JA 4IYPC 5DNYA 4YKEA 3EGHA 2CV9A 3JYFA 3QG5C 2DXLA 3H61A 4O5GA 5GTUA 3QFKA 2ZO9B 2NXFA 3C5WC 2HYOA 1V73A 3FLOA 4O43A 4V0XA 2YVTA 4WWLA 4M0VA 1HO5A 4F0ZA 4LTYA 2IE3C 4DHLA 4DSYA 3AUZA 3ZU0A 1S70A 5JPEA 2USHA 4ZVZA 4KBPA 2NYLC 5IOHA 5JJTA 2O8GA 3V4YA 4TUIA 3RL4A 5F3WA 3K7VC 1S95A 3E0JA 4JA7A 2Z72A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Z06 A;  4LU9 A;  3QFN A;  4MOY A;  3IVE A;  3CK2 A;  1FJM A;  1OID A;  4MOV A;  1W24 A;  4H1Y P;  1JK7 A;  3IB8 A;  1HPU A;  2AHD A;  3ICF A;  2WDE A;  2IAE C;  1QHW A;  3EGG A;  4H1S A;  2IE4 C;  4LAC C;  3H63 A;  4FBW A;  2BCD A;  2DFJ A;  4O24 A;  4O4K A;  4V0V A;  1TCO A;  1OI8 A;  2BDX A;  3PSO A;  1MF8 A;  3H67 A;  3IVD A;  3THO B;  3H68 A;  3THN A;  4H2B A;  1QFC A;  3IB7 A;  4IL1 A;  1Z2X A;  3FGA C;  3H62 B;  4ORC A;  1OIE A;  4ZX2 A;  4B2O A;  4OR9 A;  2O8A A;  3K7W C;  2WDF A;  4UWQ A;  4H2G A;  3RL3 A;  1XM7 A;  4ORA A;  2A22 A;  3ZTV A;  5INB A;  1S8E A;  1USH A;  4TUG A;  1HP1 A;  1SU1 A;  2GJU A;  1M63 A;  4JA9 A;  3E7A A;  3AV0 A;  2HYP A;  5J28 A;  3DSD A;  4UT3 A;  4UT2 A;  1S3N A;  3DSC A;  4H2I A;  4KKZ A;  1T70 A;  3HVQ A;  3H64 A;  1S3M A;  2BQ8 X;  2ZBM A;  4FBK A;  3H66 A;  4UT3 B;  1II7 A;  4J6O A;  1G5B A;  4FCX A;  2WDC A;  1NNW A;  5JPF A;  4V0W A;  4DT2 A;  2Z1A A;  2JOG A;  1UF3 A;  1S3L A;  1UTE A;  2QFR A;  3E7B A;  2P6B A;  3TGH A;  2HY1 A;  2R17 A;  4Q7F A;  1WAO 1;  2QFP A;  3PSN A;  3H60 A;  4FBQ A;  1U32 A;  1WAR A;  2QJC A;  3T1I A;  5EQV A;  2NYM C;  5B8I A;  1XZW A;  3QFM A;  4I5L C;  3RL5 A;  1IT6 A;  3DW8 C;  3KBP A;  3LL8 A;  3N5U A;  3P71 C;  1Z2W A;  3C9F A;  2WDD A;  4MP0 A;  4NZV A;  1T71 A;  5C1V A;  3H69 A;  2Q8U A;  5HPE A;  4XPN A;  1AUI A;  4HD0 A;  4ORB A;  3GVE A;  4H2F A;  1KBP A;  3RQZ A;  2NPP C;  4I5N C;  2XMO A;  2KKN A;  4G9J A;  4IYP C;  5DNY A;  4YKE A;  3EGH A;  2CV9 A;  3JYF A;  3QG5 C;  3H61 A;  5GTU A;  4O5G A;  3QFK A;  2NXF A;  3C5W C;  2HYO A;  1V73 A;  4O43 A;  4V0X A;  2YVT A;  4WWL A;  4M0V A;  1HO5 A;  4F0Z A;  4LTY A;  2IE3 C;  4DHL A;  4DSY A;  3AUZ A;  3ZU0 A;  1S70 A;  5JPE A;  2USH A;  4ZVZ A;  4KBP A;  2NYL C;  5IOH A;  5JJT A;  2O8G A;  3V4Y A;  4TUI A;  3RL4 A;  5F3W A;  3K7V C;  1S95 A;  3QFO A;  4JA7 A;  2Z72 A; 
#chains in the Genus database with same CATH topology
 2Z06 A;  4LU9 A;  3QFN A;  4MOY A;  2DXN A;  3IVE A;  3CK2 A;  1FJM A;  1OID A;  4MOV A;  1W24 A;  4H1Y P;  1JK7 A;  3IB8 A;  1HPU A;  2AHD A;  3ICF A;  2WDE A;  2IAE C;  1QHW A;  3EGG A;  4H1S A;  2IE4 C;  4LAC C;  3H63 A;  4FBW A;  2BCD A;  2DFJ A;  4O24 A;  4O4K A;  2YEQ A;  4V0V A;  1TCO A;  1OI8 A;  2BDX A;  3PSO A;  1MF8 A;  3H67 A;  3IVD A;  3THO B;  3H68 A;  3THN A;  4H2B A;  1QFC A;  3IB7 A;  4IL1 A;  1Z2X A;  3FGA C;  3H62 B;  4ORC A;  1OIE A;  4ZX2 A;  4B2O A;  4OR9 A;  2O8A A;  3K7W C;  2WDF A;  4UWQ A;  4H2G A;  3RL3 A;  1XM7 A;  4ORA A;  2A22 A;  3ZTV A;  5INB A;  1S8E A;  2ZOA A;  1USH A;  3QFO A;  4TUG A;  1HP1 A;  1SU1 A;  2GJU A;  1M63 A;  4JA9 A;  3E7A A;  3AV0 A;  2HYP A;  5J28 A;  3DSD A;  4UT3 A;  4UT2 A;  1S3N A;  3DSC A;  3D03 A;  4H2I A;  4KKZ A;  1T70 A;  3HVQ A;  3H64 A;  1S3M A;  2BQ8 X;  2ZBM A;  4FBK A;  3H66 A;  4UT3 B;  1II7 A;  4J6O A;  1G5B A;  4FCX A;  2WDC A;  1NNW A;  5JPF A;  4V0W A;  4DT2 A;  2Z1A A;  2JOG A;  1UF3 A;  1S3L A;  1UTE A;  2QFR A;  3E7B A;  2P6B A;  3TGH A;  2HY1 A;  2R17 A;  4Q7F A;  1WAO 1;  2QFP A;  3PSN A;  3H60 A;  4FBQ A;  1U32 A;  1WAR A;  2QJC A;  3T1I A;  5EQV A;  2NYM C;  5B8I A;  1XZW A;  3QFM A;  4I5L C;  3RL5 A;  1IT6 A;  3DW8 C;  3KBP A;  3LL8 A;  3N5U A;  3P71 C;  1Z2W A;  3C9F A;  2WDD A;  4MP0 A;  4NZV A;  1T71 A;  5C1V A;  3H69 A;  2Q8U A;  5HPE A;  4XPN A;  1AUI A;  4HD0 A;  4ORB A;  3GVE A;  4H2F A;  1KBP A;  3RQZ A;  2NPP C;  4I5N C;  2XMO A;  2KKN A;  4G9J A;  4IYP C;  5DNY A;  4YKE A;  3EGH A;  2CV9 A;  3JYF A;  3QG5 C;  2DXL A;  3H61 A;  4O5G A;  5GTU A;  3QFK A;  2ZO9 B;  2NXF A;  3C5W C;  2HYO A;  1V73 A;  3FLO A;  4O43 A;  4V0X A;  2YVT A;  4WWL A;  4M0V A;  1HO5 A;  4F0Z A;  4LTY A;  2IE3 C;  4DHL A;  4DSY A;  3AUZ A;  3ZU0 A;  1S70 A;  5JPE A;  2USH A;  4ZVZ A;  4KBP A;  2NYL C;  5IOH A;  5JJT A;  2O8G A;  3V4Y A;  4TUI A;  3RL4 A;  5F3W A;  3K7V C;  1S95 A;  3E0J A;  4JA7 A;  2Z72 A; 
#chains in the Genus database with same CATH homology
 2Z06 A;  4LU9 A;  3QFN A;  4MOY A;  2DXN A;  3IVE A;  3CK2 A;  1FJM A;  1OID A;  4MOV A;  1W24 A;  4H1Y P;  1JK7 A;  3IB8 A;  1HPU A;  2AHD A;  3ICF A;  2WDE A;  2IAE C;  1QHW A;  3EGG A;  4H1S A;  2IE4 C;  4LAC C;  3H63 A;  4FBW A;  2BCD A;  2DFJ A;  4O24 A;  4O4K A;  2YEQ A;  4V0V A;  1TCO A;  1OI8 A;  2BDX A;  3PSO A;  1MF8 A;  3H67 A;  3IVD A;  3THO B;  3H68 A;  3THN A;  4H2B A;  1QFC A;  3IB7 A;  4IL1 A;  1Z2X A;  3FGA C;  3H62 B;  4ORC A;  1OIE A;  4ZX2 A;  4B2O A;  4OR9 A;  2O8A A;  3K7W C;  2WDF A;  4UWQ A;  4H2G A;  3RL3 A;  1XM7 A;  4ORA A;  2A22 A;  3ZTV A;  5INB A;  1S8E A;  2ZOA A;  1USH A;  3QFO A;  4TUG A;  1HP1 A;  1SU1 A;  2GJU A;  1M63 A;  4JA9 A;  3E7A A;  3AV0 A;  2HYP A;  5J28 A;  3DSD A;  4UT3 A;  4UT2 A;  1S3N A;  3DSC A;  3D03 A;  4H2I A;  4KKZ A;  1T70 A;  3HVQ A;  3H64 A;  1S3M A;  2BQ8 X;  2ZBM A;  4FBK A;  3H66 A;  4UT3 B;  1II7 A;  4J6O A;  1G5B A;  4FCX A;  2WDC A;  1NNW A;  5JPF A;  4V0W A;  4DT2 A;  2Z1A A;  2JOG A;  1UF3 A;  1S3L A;  1UTE A;  2QFR A;  3E7B A;  2P6B A;  3TGH A;  2HY1 A;  2R17 A;  4Q7F A;  1WAO 1;  2QFP A;  3PSN A;  3H60 A;  4FBQ A;  1U32 A;  1WAR A;  2QJC A;  3T1I A;  5EQV A;  2NYM C;  5B8I A;  1XZW A;  3QFM A;  4I5L C;  3RL5 A;  1IT6 A;  3DW8 C;  3KBP A;  3LL8 A;  3N5U A;  3P71 C;  1Z2W A;  3C9F A;  2WDD A;  4MP0 A;  4NZV A;  1T71 A;  5C1V A;  3H69 A;  2Q8U A;  5HPE A;  4XPN A;  1AUI A;  4HD0 A;  4ORB A;  3GVE A;  4H2F A;  1KBP A;  3RQZ A;  2NPP C;  4I5N C;  2XMO A;  2KKN A;  4G9J A;  4IYP C;  5DNY A;  4YKE A;  3EGH A;  2CV9 A;  3JYF A;  3QG5 C;  2DXL A;  3H61 A;  4O5G A;  5GTU A;  3QFK A;  2ZO9 B;  2NXF A;  3C5W C;  2HYO A;  1V73 A;  3FLO A;  4O43 A;  4V0X A;  2YVT A;  4WWL A;  4M0V A;  1HO5 A;  4F0Z A;  4LTY A;  2IE3 C;  4DHL A;  4DSY A;  3AUZ A;  3ZU0 A;  1S70 A;  5JPE A;  2USH A;  4ZVZ A;  4KBP A;  2NYL C;  5IOH A;  5JJT A;  2O8G A;  3V4Y A;  4TUI A;  3RL4 A;  5F3W A;  3K7V C;  1S95 A;  3E0J A;  4JA7 A;  2Z72 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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