2BQ8X

Crystal structure of human purple acid phosphatase with an inhibitory conformation of the repression loop
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
304
structure length
304
Chain Sequence
ATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRRARP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Homo sapiens
publication title Crystal Structures of Recombinant Human Purple Acid Phosphatase with and without an Inhibitory Conformation of the Repression Loop.
pubmed doi rcsb
molecule keywords TARTRATE-RESISTANT ACID PHOSPHATASE TYPE 5
total genus 103
structure length 304
sequence length 304
ec nomenclature ec 3.1.3.2: Acid phosphatase.
pdb deposition date 2005-04-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
X PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2bq8X00
4ZVZA 3E7AA 3KBPA 4JA7A 4O4KA 1USHA 3TGHA 3K7WC 2DFJA 1II7A 2A22A 4MOYA 1NNWA 4XPNA 3C9FA 1S3MA 4LU9A 1QFCA 3PSOA 4I5NC 4KBPA 2O8GA 3ZU0A 4ZX2A 2R17A 5DNYA 4UT3B 4NZVA 2HY1A 3K7VC 4DT2A 2WDEA 2ZBMA 4TUIA 3EGHA 2P6BA 4UT3A 3E7BA 3JYFA 5IOHA 4JA9A 1V73A 1S3LA 3RL4A 3H66A 3QG5C 4FBKA 1SU1A 3PSNA 3AV0A 3RL5A 3C5WC 3ICFA 4H2GA 4O24A 3AUZA 3H68A 3DW8C 4I5LC 1QHWA 1OIDA 3EGGA 4OR9A 3H61A 3H69A 3QFNA 4F0ZA 3QFMA 2KKNA 1IT6A 2HYOA 4ORBA 4B2OA 4V0WA 3N5UA 1JK7A 3H63A 3H64A 3DSDA 4DHLA 5HPEA 3FGAC 4LACC 2HYPA 3V4YA 3RL3A 2XMOA 1TCOA 4V0XA 1UTEA 1FJMA 5GTUA 5J28A 1Z2WA 4UT2A 1OIEA 4FCXA 2BQ8X 2USHA 4YKEA 4FBWA 1MF8A 2AHDA 5F3WA 3DSCA 2WDFA 4IYPC 1S8EA 2Z72A 1XM7A 1G5BA 5EQVA 1S70A 3P71C 4WWLA 4M0VA 4IL1A 1HO5A 1T71A 2BDXA 1S95A 1AUIA 4DSYA 5INBA 5B8IA 4UWQA 3IB8A 1WARA 3HVQA 5C1VA 4TUGA 2NXFA 3IVEA 4H2FA 3ZTVA 4H2BA 2NYLC 3CK2A 2QFPA 5JJTA 3H62B 4ORAA 3H60A 2GJUA 4MP0A 1T70A 2CV9A 4LTYA 2QJCA 3GVEA 3QFOA 4H1YP 2Q8UA 2WDCA 2O8AA 5JPFA 2YVTA 4V0VA 1KBPA 1S3NA 2BCDA 4H1SA 3LL8A 4H2IA 4MOVA 2IAEC 4G9JA 4ORCA 1Z2XA 1HP1A 4O5GA 1OI8A 4FBQA 4J6OA 2Z1AA 2Z06A 1XZWA 2JOGA 1U32A 2QFRA 2WDDA 3QFKA 3RQZA 2NYMC 4HD0A 1HPUA 3T1IA 2IE4C 3THOB 2NPPC 1WAO1 1M63A 3H67A 4O43A 1UF3A 4Q7FA 1W24A 3IB7A 5JPEA 3IVDA 2IE3C 4KKZA 3THNA
chains in the Genus database with same CATH superfamily
4ZVZA 3E7AA 3KBPA 4JA7A 4O4KA 1USHA 3TGHA 3K7WC 2DFJA 1II7A 2A22A 4MOYA 1NNWA 4XPNA 3C9FA 1S3MA 4LU9A 1QFCA 3PSOA 4I5NC 4KBPA 2O8GA 3ZU0A 4ZX2A 2R17A 5DNYA 4UT3B 4NZVA 2HY1A 3K7VC 4DT2A 2ZO9B 2WDEA 2ZBMA 4TUIA 3EGHA 2P6BA 4UT3A 3E7BA 3JYFA 5IOHA 4JA9A 1V73A 1S3LA 3RL4A 3H66A 3QG5C 4FBKA 1SU1A 3PSNA 3AV0A 3RL5A 3C5WC 3ICFA 4H2GA 4O24A 3AUZA 3H68A 3DW8C 4I5LC 1QHWA 1OIDA 3EGGA 4OR9A 3H61A 3H69A 2ZOAA 3QFNA 4F0ZA 3QFMA 2KKNA 1IT6A 2HYOA 4ORBA 4B2OA 4V0WA 3N5UA 1JK7A 3H63A 3H64A 3DSDA 4DHLA 5HPEA 3FGAC 4LACC 2HYPA 3V4YA 3RL3A 2XMOA 1TCOA 4V0XA 1UTEA 1FJMA 5GTUA 5J28A 1Z2WA 4UT2A 1OIEA 4FCXA 2BQ8X 2USHA 4YKEA 4FBWA 1MF8A 2AHDA 5F3WA 3DSCA 2WDFA 4IYPC 1S8EA 3E0JA 2Z72A 1XM7A 1G5BA 5EQVA 1S70A 3P71C 4WWLA 4M0VA 4IL1A 1HO5A 1T71A 2BDXA 1S95A 1AUIA 4DSYA 2DXNA 5INBA 5B8IA 4UWQA 2DXLA 3IB8A 1WARA 3HVQA 5C1VA 4TUGA 2NXFA 3IVEA 4H2FA 3ZTVA 4H2BA 2NYLC 3CK2A 2QFPA 3D03A 3H62B 5JJTA 4ORAA 3H60A 2GJUA 4MP0A 2YEQA 1T70A 2CV9A 4LTYA 2QJCA 3FLOA 3GVEA 3QFOA 4H1YP 2Q8UA 2WDCA 2O8AA 5JPFA 2YVTA 4V0VA 1KBPA 1S3NA 2BCDA 4H1SA 3LL8A 4H2IA 4MOVA 2IAEC 4G9JA 4ORCA 1Z2XA 1HP1A 4O5GA 1OI8A 4FBQA 4J6OA 2Z1AA 2Z06A 1XZWA 2JOGA 1U32A 2QFRA 2WDDA 3QFKA 3RQZA 2NYMC 4HD0A 1HPUA 3T1IA 2IE4C 3THOB 2NPPC 1WAO1 1M63A 3H67A 4O43A 1UF3A 4Q7FA 1W24A 3IB7A 5JPEA 3IVDA 2IE3C 4KKZA 3THNA
chains in the Genus database with same CATH topology
4ZVZA 3E7AA 3KBPA 4JA7A 4O4KA 1USHA 3TGHA 3K7WC 2DFJA 1II7A 2A22A 4MOYA 1NNWA 4XPNA 3C9FA 1S3MA 4LU9A 1QFCA 3PSOA 4I5NC 4KBPA 2O8GA 3ZU0A 4ZX2A 2R17A 5DNYA 4UT3B 4NZVA 2HY1A 3K7VC 4DT2A 2ZO9B 2WDEA 2ZBMA 4TUIA 3EGHA 2P6BA 4UT3A 3E7BA 3JYFA 5IOHA 4JA9A 1V73A 1S3LA 3RL4A 3H66A 3QG5C 4FBKA 1SU1A 3PSNA 3AV0A 3RL5A 3C5WC 3ICFA 4H2GA 4O24A 3AUZA 3H68A 3DW8C 4I5LC 1QHWA 1OIDA 3EGGA 4OR9A 3H61A 3H69A 2ZOAA 3QFNA 4F0ZA 3QFMA 2KKNA 1IT6A 2HYOA 4ORBA 4B2OA 4V0WA 3N5UA 1JK7A 3H63A 3H64A 3DSDA 4DHLA 5HPEA 3FGAC 4LACC 2HYPA 3V4YA 3RL3A 2XMOA 1TCOA 4V0XA 1UTEA 1FJMA 5GTUA 5J28A 1Z2WA 4UT2A 1OIEA 4FCXA 2BQ8X 2USHA 4YKEA 4FBWA 1MF8A 2AHDA 5F3WA 3DSCA 2WDFA 4IYPC 1S8EA 3E0JA 2Z72A 1XM7A 1G5BA 5EQVA 1S70A 3P71C 4WWLA 4M0VA 4IL1A 1HO5A 1T71A 2BDXA 1S95A 1AUIA 4DSYA 2DXNA 5INBA 5B8IA 4UWQA 2DXLA 3IB8A 1WARA 3HVQA 5C1VA 4TUGA 2NXFA 3IVEA 4H2FA 3ZTVA 4H2BA 2NYLC 3CK2A 2QFPA 3D03A 3H62B 5JJTA 4ORAA 3H60A 2GJUA 4MP0A 2YEQA 1T70A 2CV9A 4LTYA 2QJCA 3FLOA 3GVEA 3QFOA 4H1YP 2Q8UA 2WDCA 2O8AA 5JPFA 2YVTA 4V0VA 1KBPA 1S3NA 2BCDA 4H1SA 3LL8A 4H2IA 4MOVA 2IAEC 4G9JA 4ORCA 1Z2XA 1HP1A 4O5GA 1OI8A 4FBQA 4J6OA 2Z1AA 2Z06A 1XZWA 2JOGA 1U32A 2QFRA 2WDDA 3QFKA 3RQZA 2NYMC 4HD0A 1HPUA 3T1IA 2IE4C 3THOB 2NPPC 1WAO1 1M63A 3H67A 4O43A 1UF3A 4Q7FA 1W24A 3IB7A 5JPEA 3IVDA 2IE3C 4KKZA 3THNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZVZ A;  3E7A A;  3KBP A;  4JA7 A;  4O4K A;  1USH A;  3TGH A;  3K7W C;  2DFJ A;  1II7 A;  2A22 A;  4MOY A;  1NNW A;  4XPN A;  3C9F A;  1S3M A;  4LU9 A;  1QFC A;  3PSO A;  4I5N C;  4KBP A;  2O8G A;  3ZU0 A;  4ZX2 A;  2R17 A;  5DNY A;  4UT3 B;  4NZV A;  2HY1 A;  3K7V C;  4DT2 A;  2WDE A;  2ZBM A;  4TUI A;  3EGH A;  2P6B A;  4UT3 A;  3E7B A;  3JYF A;  5IOH A;  4JA9 A;  1V73 A;  1S3L A;  3RL4 A;  3H66 A;  3QG5 C;  4FBK A;  1SU1 A;  3PSN A;  3AV0 A;  3RL5 A;  3C5W C;  3ICF A;  4H2G A;  4O24 A;  3AUZ A;  3H68 A;  3DW8 C;  4I5L C;  1QHW A;  1OID A;  3EGG A;  4OR9 A;  3H61 A;  3H69 A;  3QFN A;  4F0Z A;  3QFM A;  2KKN A;  1IT6 A;  2HYO A;  4ORB A;  4B2O A;  4V0W A;  3N5U A;  1JK7 A;  3H63 A;  3H64 A;  3DSD A;  4DHL A;  5HPE A;  3FGA C;  4LAC C;  2HYP A;  3V4Y A;  3RL3 A;  2XMO A;  1TCO A;  4V0X A;  1UTE A;  1FJM A;  5GTU A;  5J28 A;  1Z2W A;  4UT2 A;  1OIE A;  4FCX A;  2BQ8 X;  2USH A;  4YKE A;  4FBW A;  1MF8 A;  2AHD A;  5F3W A;  3DSC A;  2WDF A;  4IYP C;  1S8E A;  2Z72 A;  1XM7 A;  1G5B A;  5EQV A;  1S70 A;  3P71 C;  4WWL A;  4M0V A;  4IL1 A;  1HO5 A;  1T71 A;  2BDX A;  1S95 A;  1AUI A;  4DSY A;  5INB A;  5B8I A;  4UWQ A;  3IB8 A;  1WAR A;  3HVQ A;  5C1V A;  4TUG A;  2NXF A;  3IVE A;  4H2F A;  3ZTV A;  4H2B A;  2NYL C;  3CK2 A;  2QFP A;  5JJT A;  3H62 B;  4ORA A;  3H60 A;  2GJU A;  4MP0 A;  1T70 A;  2CV9 A;  4LTY A;  2QJC A;  3GVE A;  3QFO A;  4H1Y P;  2Q8U A;  2WDC A;  2O8A A;  5JPF A;  2YVT A;  4V0V A;  1KBP A;  1S3N A;  2BCD A;  4H1S A;  3LL8 A;  4H2I A;  4MOV A;  2IAE C;  4G9J A;  4ORC A;  1Z2X A;  1HP1 A;  4O5G A;  1OI8 A;  4FBQ A;  4J6O A;  2Z1A A;  2Z06 A;  1XZW A;  2JOG A;  1U32 A;  2QFR A;  2WDD A;  3QFK A;  3RQZ A;  2NYM C;  4HD0 A;  1HPU A;  3T1I A;  2IE4 C;  3THO B;  2NPP C;  1WAO 1;  1M63 A;  3H67 A;  4O43 A;  1UF3 A;  4Q7F A;  1W24 A;  3IB7 A;  5JPE A;  3IVD A;  2IE3 C;  4KKZ A;  3THN A; 
#chains in the Genus database with same CATH topology
 4ZVZ A;  3E7A A;  3KBP A;  4JA7 A;  4O4K A;  1USH A;  3TGH A;  3K7W C;  2DFJ A;  1II7 A;  2A22 A;  4MOY A;  1NNW A;  4XPN A;  3C9F A;  1S3M A;  4LU9 A;  1QFC A;  3PSO A;  4I5N C;  4KBP A;  2O8G A;  3ZU0 A;  4ZX2 A;  2R17 A;  5DNY A;  4UT3 B;  4NZV A;  2HY1 A;  3K7V C;  4DT2 A;  2ZO9 B;  2WDE A;  2ZBM A;  4TUI A;  3EGH A;  2P6B A;  4UT3 A;  3E7B A;  3JYF A;  5IOH A;  4JA9 A;  1V73 A;  1S3L A;  3RL4 A;  3H66 A;  3QG5 C;  4FBK A;  1SU1 A;  3PSN A;  3AV0 A;  3RL5 A;  3C5W C;  3ICF A;  4H2G A;  4O24 A;  3AUZ A;  3H68 A;  3DW8 C;  4I5L C;  1QHW A;  1OID A;  3EGG A;  4OR9 A;  3H61 A;  3H69 A;  2ZOA A;  3QFN A;  4F0Z A;  3QFM A;  2KKN A;  1IT6 A;  2HYO A;  4ORB A;  4B2O A;  4V0W A;  3N5U A;  1JK7 A;  3H63 A;  3H64 A;  3DSD A;  4DHL A;  5HPE A;  3FGA C;  4LAC C;  2HYP A;  3V4Y A;  3RL3 A;  2XMO A;  1TCO A;  4V0X A;  1UTE A;  1FJM A;  5GTU A;  5J28 A;  1Z2W A;  4UT2 A;  1OIE A;  4FCX A;  2BQ8 X;  2USH A;  4YKE A;  4FBW A;  1MF8 A;  2AHD A;  5F3W A;  3DSC A;  2WDF A;  4IYP C;  1S8E A;  3E0J A;  2Z72 A;  1XM7 A;  1G5B A;  5EQV A;  1S70 A;  3P71 C;  4WWL A;  4M0V A;  4IL1 A;  1HO5 A;  1T71 A;  2BDX A;  1S95 A;  1AUI A;  4DSY A;  2DXN A;  5INB A;  5B8I A;  4UWQ A;  2DXL A;  3IB8 A;  1WAR A;  3HVQ A;  5C1V A;  4TUG A;  2NXF A;  3IVE A;  4H2F A;  3ZTV A;  4H2B A;  2NYL C;  3CK2 A;  2QFP A;  3D03 A;  3H62 B;  5JJT A;  4ORA A;  3H60 A;  2GJU A;  4MP0 A;  2YEQ A;  1T70 A;  2CV9 A;  4LTY A;  2QJC A;  3FLO A;  3GVE A;  3QFO A;  4H1Y P;  2Q8U A;  2WDC A;  2O8A A;  5JPF A;  2YVT A;  4V0V A;  1KBP A;  1S3N A;  2BCD A;  4H1S A;  3LL8 A;  4H2I A;  4MOV A;  2IAE C;  4G9J A;  4ORC A;  1Z2X A;  1HP1 A;  4O5G A;  1OI8 A;  4FBQ A;  4J6O A;  2Z1A A;  2Z06 A;  1XZW A;  2JOG A;  1U32 A;  2QFR A;  2WDD A;  3QFK A;  3RQZ A;  2NYM C;  4HD0 A;  1HPU A;  3T1I A;  2IE4 C;  3THO B;  2NPP C;  1WAO 1;  1M63 A;  3H67 A;  4O43 A;  1UF3 A;  4Q7F A;  1W24 A;  3IB7 A;  5JPE A;  3IVD A;  2IE3 C;  4KKZ A;  3THN A; 
#chains in the Genus database with same CATH homology
 4ZVZ A;  3E7A A;  3KBP A;  4JA7 A;  4O4K A;  1USH A;  3TGH A;  3K7W C;  2DFJ A;  1II7 A;  2A22 A;  4MOY A;  1NNW A;  4XPN A;  3C9F A;  1S3M A;  4LU9 A;  1QFC A;  3PSO A;  4I5N C;  4KBP A;  2O8G A;  3ZU0 A;  4ZX2 A;  2R17 A;  5DNY A;  4UT3 B;  4NZV A;  2HY1 A;  3K7V C;  4DT2 A;  2ZO9 B;  2WDE A;  2ZBM A;  4TUI A;  3EGH A;  2P6B A;  4UT3 A;  3E7B A;  3JYF A;  5IOH A;  4JA9 A;  1V73 A;  1S3L A;  3RL4 A;  3H66 A;  3QG5 C;  4FBK A;  1SU1 A;  3PSN A;  3AV0 A;  3RL5 A;  3C5W C;  3ICF A;  4H2G A;  4O24 A;  3AUZ A;  3H68 A;  3DW8 C;  4I5L C;  1QHW A;  1OID A;  3EGG A;  4OR9 A;  3H61 A;  3H69 A;  2ZOA A;  3QFN A;  4F0Z A;  3QFM A;  2KKN A;  1IT6 A;  2HYO A;  4ORB A;  4B2O A;  4V0W A;  3N5U A;  1JK7 A;  3H63 A;  3H64 A;  3DSD A;  4DHL A;  5HPE A;  3FGA C;  4LAC C;  2HYP A;  3V4Y A;  3RL3 A;  2XMO A;  1TCO A;  4V0X A;  1UTE A;  1FJM A;  5GTU A;  5J28 A;  1Z2W A;  4UT2 A;  1OIE A;  4FCX A;  2BQ8 X;  2USH A;  4YKE A;  4FBW A;  1MF8 A;  2AHD A;  5F3W A;  3DSC A;  2WDF A;  4IYP C;  1S8E A;  3E0J A;  2Z72 A;  1XM7 A;  1G5B A;  5EQV A;  1S70 A;  3P71 C;  4WWL A;  4M0V A;  4IL1 A;  1HO5 A;  1T71 A;  2BDX A;  1S95 A;  1AUI A;  4DSY A;  2DXN A;  5INB A;  5B8I A;  4UWQ A;  2DXL A;  3IB8 A;  1WAR A;  3HVQ A;  5C1V A;  4TUG A;  2NXF A;  3IVE A;  4H2F A;  3ZTV A;  4H2B A;  2NYL C;  3CK2 A;  2QFP A;  3D03 A;  3H62 B;  5JJT A;  4ORA A;  3H60 A;  2GJU A;  4MP0 A;  2YEQ A;  1T70 A;  2CV9 A;  4LTY A;  2QJC A;  3FLO A;  3GVE A;  3QFO A;  4H1Y P;  2Q8U A;  2WDC A;  2O8A A;  5JPF A;  2YVT A;  4V0V A;  1KBP A;  1S3N A;  2BCD A;  4H1S A;  3LL8 A;  4H2I A;  4MOV A;  2IAE C;  4G9J A;  4ORC A;  1Z2X A;  1HP1 A;  4O5G A;  1OI8 A;  4FBQ A;  4J6O A;  2Z1A A;  2Z06 A;  1XZW A;  2JOG A;  1U32 A;  2QFR A;  2WDD A;  3QFK A;  3RQZ A;  2NYM C;  4HD0 A;  1HPU A;  3T1I A;  2IE4 C;  3THO B;  2NPP C;  1WAO 1;  1M63 A;  3H67 A;  4O43 A;  1UF3 A;  4Q7F A;  1W24 A;  3IB7 A;  5JPE A;  3IVD A;  2IE3 C;  4KKZ A;  3THN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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