4XPNA

Crystal structure of protein phosphate 1 complexed with pp1 binding domain of gadd34
Total Genus 105
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
105
sequence length
296
structure length
296
Chain Sequence
MGSLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Serine/threonine-protein phosphatase PP1-alpha catalytic sub
publication title Structural and Functional Analysis of the GADD34:PP1 eIF2 alpha Phosphatase.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Hydrolase
total genus 105
structure length 296
sequence length 296
chains with identical sequence C
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2015-01-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF16891 STPPase_N Serine-threonine protein phosphatase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4xpnA00
3PSOA 4J6OA 1G5BA 2CV9A 2Z72A 3K7WC 3QFOA 1HP1A 3AUZA 4UT3A 5IOHA 4MP0A 4DHLA 4O24A 4FCXA 3DSCA 4I5LC 5C1VA 5B8IA 5F3WA 2NYMC 3H69A 4XPNA 2KKNA 3H60A 3IB8A 4KBPA 4KKZA 3RL5A 5GTUA 2NXFA 4Q7FA 3V4YA 1HPUA 3H64A 4M0VA 4MOYA 3P71C 4TUGA 3HVQA 3IB7A 4DT2A 1KBPA 1U32A 3IVEA 3C9FA 5INBA 4ORCA 2ZBMA 4H1YP 3QG5C 5J28A 4O43A 4IL1A 2BCDA 2WDCA 2GJUA 4ORBA 2Z1AA 2QFPA 1S3LA 3AV0A 5JPEA 4YKEA 3DSDA 3QFMA 2Z06A 3CK2A 1S95A 3DW8C 4HD0A 1OIEA 3JYFA 4UT3B 1NNWA 4ZVZA 3RL4A 3KBPA 3QFKA 4IYPC 1Z2XA 3IVDA 4H2GA 4V0XA 5JPFA 1S70A 3H63A 4LACC 1SU1A 5EQVA 2Q8UA 3K7VC 1UF3A 3PSNA 4UT2A 1OIDA 2QJCA 1M63A 2DFJA 1FJMA 2NPPC 1XZWA 1AUIA 2HYOA 2O8GA 1T70A 3H62B 4DSYA 1JK7A 3QFNA 2XMOA 3EGGA 1XM7A 1OI8A 2IAEC 1T71A 1HO5A 1IT6A 1QFCA 3N5UA 3H66A 4LU9A 2JOGA 2YVTA 2USHA 4H2BA 1S3NA 4FBWA 4UWQA 4I5NC 4NZVA 2AHDA 5JJTA 1W24A 4MOVA 1MF8A 4ZX2A 1II7A 3GVEA 1WARA 4FBKA 4H2FA 4JA9A 3LL8A 4V0WA 4LTYA 3TGHA 3T1IA 5HPEA 1Z2WA 3H61A 2WDEA 3C5WC 3EGHA 3E7BA 4O5GA 1TCOA 2NYLC 4F0ZA 2IE3C 4OR9A 4JA7A 2HY1A 4TUIA 2A22A 4ORAA 5DNYA 4WWLA 1USHA 3H68A 3THNA 2QFRA 1WAO1 2O8AA 3FGAC 2BQ8X 2P6BA 2R17A 2HYPA 4V0VA 1UTEA 4O4KA 1S3MA 1S8EA 4H1SA 3THOB 4G9JA 1QHWA 3ICFA 3RQZA 3H67A 4B2OA 2WDFA 2BDXA 4H2IA 3ZU0A 2WDDA 1V73A 4FBQA 3RL3A 3E7AA 2IE4C 3ZTVA
chains in the Genus database with same CATH superfamily
3PSOA 4J6OA 1G5BA 2CV9A 2Z72A 3K7WC 3QFOA 1HP1A 3AUZA 4UT3A 5IOHA 4MP0A 4DHLA 4O24A 4FCXA 3DSCA 4I5LC 2ZOAA 5C1VA 5B8IA 5F3WA 2NYMC 3H69A 3FLOA 4XPNA 2KKNA 3H60A 3IB8A 4KBPA 4KKZA 3RL5A 5GTUA 2NXFA 4Q7FA 3V4YA 1HPUA 3H64A 4M0VA 4MOYA 3P71C 4TUGA 3HVQA 3IB7A 4DT2A 1KBPA 1U32A 3IVEA 3C9FA 5INBA 4ORCA 2ZBMA 4H1YP 3QG5C 5J28A 4O43A 4IL1A 2BCDA 2WDCA 2GJUA 4ORBA 2Z1AA 2QFPA 1S3LA 3AV0A 5JPEA 4YKEA 3DSDA 3QFMA 2Z06A 3CK2A 1S95A 3DW8C 4HD0A 1OIEA 3JYFA 4UT3B 1NNWA 4ZVZA 3RL4A 3KBPA 3QFKA 4IYPC 1Z2XA 3E0JA 3IVDA 4H2GA 4V0XA 5JPFA 2DXNA 1S70A 3H63A 4LACC 1SU1A 5EQVA 2Q8UA 3K7VC 1UF3A 3PSNA 4UT2A 1OIDA 2QJCA 1M63A 2DFJA 1FJMA 2NPPC 1XZWA 1AUIA 2HYOA 2O8GA 1T70A 3H62B 4DSYA 1JK7A 3QFNA 2XMOA 3EGGA 1XM7A 1OI8A 2IAEC 1T71A 1HO5A 1IT6A 1QFCA 3N5UA 3H66A 4LU9A 2JOGA 2YVTA 2USHA 4H2BA 1S3NA 4FBWA 4UWQA 4I5NC 4NZVA 2AHDA 5JJTA 1W24A 4MOVA 1MF8A 4ZX2A 1II7A 3GVEA 1WARA 2DXLA 2ZO9B 4FBKA 4H2FA 4JA9A 3LL8A 4V0WA 4LTYA 3TGHA 3T1IA 5HPEA 1Z2WA 3H61A 2WDEA 3C5WC 3EGHA 3E7BA 4O5GA 1TCOA 2NYLC 4F0ZA 2IE3C 4OR9A 4JA7A 2HY1A 4TUIA 2A22A 4ORAA 5DNYA 4WWLA 3D03A 1USHA 3H68A 3THNA 2QFRA 1WAO1 2O8AA 3FGAC 2BQ8X 2P6BA 2R17A 2HYPA 4V0VA 1UTEA 4O4KA 1S3MA 1S8EA 4H1SA 3THOB 4G9JA 1QHWA 3ICFA 3RQZA 3H67A 4B2OA 2WDFA 2BDXA 4H2IA 3ZU0A 2WDDA 1V73A 4FBQA 3RL3A 3E7AA 2IE4C 3ZTVA 2YEQA
chains in the Genus database with same CATH topology
3PSOA 4J6OA 1G5BA 2CV9A 2Z72A 3K7WC 3QFOA 1HP1A 3AUZA 4UT3A 5IOHA 4MP0A 4DHLA 4O24A 4FCXA 3DSCA 4I5LC 2ZOAA 5C1VA 5B8IA 5F3WA 2NYMC 3H69A 3FLOA 4XPNA 2KKNA 3H60A 3IB8A 4KBPA 4KKZA 3RL5A 5GTUA 2NXFA 4Q7FA 3V4YA 1HPUA 3H64A 4M0VA 4MOYA 3P71C 4TUGA 3HVQA 3IB7A 4DT2A 1KBPA 1U32A 3IVEA 3C9FA 5INBA 4ORCA 2ZBMA 4H1YP 3QG5C 5J28A 4O43A 4IL1A 2BCDA 2WDCA 2GJUA 4ORBA 2Z1AA 2QFPA 1S3LA 3AV0A 5JPEA 4YKEA 3DSDA 3QFMA 2Z06A 3CK2A 1S95A 3DW8C 4HD0A 1OIEA 3JYFA 4UT3B 1NNWA 4ZVZA 3RL4A 3KBPA 3QFKA 4IYPC 1Z2XA 3E0JA 3IVDA 4H2GA 4V0XA 5JPFA 2DXNA 1S70A 3H63A 4LACC 1SU1A 5EQVA 2Q8UA 3K7VC 1UF3A 3PSNA 4UT2A 1OIDA 2QJCA 1M63A 2DFJA 1FJMA 2NPPC 1XZWA 1AUIA 2HYOA 2O8GA 1T70A 3H62B 4DSYA 1JK7A 3QFNA 2XMOA 3EGGA 1XM7A 1OI8A 2IAEC 1T71A 1HO5A 1IT6A 1QFCA 3N5UA 3H66A 4LU9A 2JOGA 2YVTA 2USHA 4H2BA 1S3NA 4FBWA 4UWQA 4I5NC 4NZVA 2AHDA 5JJTA 1W24A 4MOVA 1MF8A 4ZX2A 1II7A 3GVEA 1WARA 2DXLA 2ZO9B 4FBKA 4H2FA 4JA9A 3LL8A 4V0WA 4LTYA 3TGHA 3T1IA 5HPEA 1Z2WA 3H61A 2WDEA 3C5WC 3EGHA 3E7BA 4O5GA 1TCOA 2NYLC 4F0ZA 2IE3C 4OR9A 4JA7A 2HY1A 4TUIA 2A22A 4ORAA 5DNYA 4WWLA 3D03A 1USHA 3H68A 3THNA 2QFRA 1WAO1 2O8AA 3FGAC 2BQ8X 2P6BA 2R17A 2HYPA 4V0VA 1UTEA 4O4KA 1S3MA 1S8EA 4H1SA 3THOB 4G9JA 1QHWA 3ICFA 3RQZA 3H67A 4B2OA 2WDFA 2BDXA 4H2IA 3ZU0A 2WDDA 1V73A 4FBQA 3RL3A 3E7AA 2IE4C 3ZTVA 2YEQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PSO A;  4J6O A;  1G5B A;  2CV9 A;  2Z72 A;  3K7W C;  3QFO A;  1HP1 A;  3AUZ A;  4UT3 A;  5IOH A;  4MP0 A;  4DHL A;  4O24 A;  4FCX A;  3DSC A;  4I5L C;  5C1V A;  5B8I A;  5F3W A;  2NYM C;  3H69 A;  4XPN A;  2KKN A;  3H60 A;  3IB8 A;  4KBP A;  4KKZ A;  3RL5 A;  5GTU A;  2NXF A;  4Q7F A;  3V4Y A;  1HPU A;  3H64 A;  4M0V A;  4MOY A;  3P71 C;  4TUG A;  3HVQ A;  3IB7 A;  4DT2 A;  1KBP A;  1U32 A;  3IVE A;  3C9F A;  5INB A;  4ORC A;  2ZBM A;  4H1Y P;  3QG5 C;  5J28 A;  4O43 A;  4IL1 A;  2BCD A;  2WDC A;  2GJU A;  4ORB A;  2Z1A A;  2QFP A;  1S3L A;  3AV0 A;  5JPE A;  4YKE A;  3DSD A;  3QFM A;  2Z06 A;  3CK2 A;  1S95 A;  3DW8 C;  4HD0 A;  1OIE A;  3JYF A;  4UT3 B;  1NNW A;  4ZVZ A;  3RL4 A;  3KBP A;  3QFK A;  4IYP C;  1Z2X A;  3IVD A;  4H2G A;  4V0X A;  5JPF A;  1S70 A;  3H63 A;  4LAC C;  1SU1 A;  5EQV A;  2Q8U A;  3K7V C;  1UF3 A;  3PSN A;  4UT2 A;  1OID A;  2QJC A;  1M63 A;  2DFJ A;  1FJM A;  2NPP C;  1XZW A;  1AUI A;  2HYO A;  2O8G A;  1T70 A;  3H62 B;  4DSY A;  1JK7 A;  3QFN A;  2XMO A;  3EGG A;  1XM7 A;  1OI8 A;  2IAE C;  1T71 A;  1HO5 A;  1IT6 A;  1QFC A;  3N5U A;  3H66 A;  4LU9 A;  2JOG A;  2YVT A;  2USH A;  4H2B A;  1S3N A;  4FBW A;  4UWQ A;  4I5N C;  4NZV A;  2AHD A;  5JJT A;  1W24 A;  4MOV A;  1MF8 A;  4ZX2 A;  1II7 A;  3GVE A;  1WAR A;  4FBK A;  4H2F A;  4JA9 A;  3LL8 A;  4V0W A;  4LTY A;  3TGH A;  3T1I A;  5HPE A;  1Z2W A;  3H61 A;  2WDE A;  3C5W C;  3EGH A;  3E7B A;  4O5G A;  1TCO A;  2NYL C;  4F0Z A;  2IE3 C;  4OR9 A;  4JA7 A;  2HY1 A;  4TUI A;  2A22 A;  4ORA A;  5DNY A;  4WWL A;  1USH A;  3H68 A;  3THN A;  2QFR A;  1WAO 1;  2O8A A;  3FGA C;  2BQ8 X;  2P6B A;  2R17 A;  2HYP A;  4V0V A;  1UTE A;  4O4K A;  1S3M A;  1S8E A;  4H1S A;  3THO B;  4G9J A;  1QHW A;  3ICF A;  3RQZ A;  3H67 A;  4B2O A;  2WDF A;  2BDX A;  4H2I A;  3ZU0 A;  2WDD A;  1V73 A;  4FBQ A;  3RL3 A;  3E7A A;  2IE4 C;  3ZTV A; 
#chains in the Genus database with same CATH topology
 3PSO A;  4J6O A;  1G5B A;  2CV9 A;  2Z72 A;  3K7W C;  3QFO A;  1HP1 A;  3AUZ A;  4UT3 A;  5IOH A;  4MP0 A;  4DHL A;  4O24 A;  4FCX A;  3DSC A;  4I5L C;  2ZOA A;  5C1V A;  5B8I A;  5F3W A;  2NYM C;  3H69 A;  3FLO A;  4XPN A;  2KKN A;  3H60 A;  3IB8 A;  4KBP A;  4KKZ A;  3RL5 A;  5GTU A;  2NXF A;  4Q7F A;  3V4Y A;  1HPU A;  3H64 A;  4M0V A;  4MOY A;  3P71 C;  4TUG A;  3HVQ A;  3IB7 A;  4DT2 A;  1KBP A;  1U32 A;  3IVE A;  3C9F A;  5INB A;  4ORC A;  2ZBM A;  4H1Y P;  3QG5 C;  5J28 A;  4O43 A;  4IL1 A;  2BCD A;  2WDC A;  2GJU A;  4ORB A;  2Z1A A;  2QFP A;  1S3L A;  3AV0 A;  5JPE A;  4YKE A;  3DSD A;  3QFM A;  2Z06 A;  3CK2 A;  1S95 A;  3DW8 C;  4HD0 A;  1OIE A;  3JYF A;  4UT3 B;  1NNW A;  4ZVZ A;  3RL4 A;  3KBP A;  3QFK A;  4IYP C;  1Z2X A;  3E0J A;  3IVD A;  4H2G A;  4V0X A;  5JPF A;  2DXN A;  1S70 A;  3H63 A;  4LAC C;  1SU1 A;  5EQV A;  2Q8U A;  3K7V C;  1UF3 A;  3PSN A;  4UT2 A;  1OID A;  2QJC A;  1M63 A;  2DFJ A;  1FJM A;  2NPP C;  1XZW A;  1AUI A;  2HYO A;  2O8G A;  1T70 A;  3H62 B;  4DSY A;  1JK7 A;  3QFN A;  2XMO A;  3EGG A;  1XM7 A;  1OI8 A;  2IAE C;  1T71 A;  1HO5 A;  1IT6 A;  1QFC A;  3N5U A;  3H66 A;  4LU9 A;  2JOG A;  2YVT A;  2USH A;  4H2B A;  1S3N A;  4FBW A;  4UWQ A;  4I5N C;  4NZV A;  2AHD A;  5JJT A;  1W24 A;  4MOV A;  1MF8 A;  4ZX2 A;  1II7 A;  3GVE A;  1WAR A;  2DXL A;  2ZO9 B;  4FBK A;  4H2F A;  4JA9 A;  3LL8 A;  4V0W A;  4LTY A;  3TGH A;  3T1I A;  5HPE A;  1Z2W A;  3H61 A;  2WDE A;  3C5W C;  3EGH A;  3E7B A;  4O5G A;  1TCO A;  2NYL C;  4F0Z A;  2IE3 C;  4OR9 A;  4JA7 A;  2HY1 A;  4TUI A;  2A22 A;  4ORA A;  5DNY A;  4WWL A;  3D03 A;  1USH A;  3H68 A;  3THN A;  2QFR A;  1WAO 1;  2O8A A;  3FGA C;  2BQ8 X;  2P6B A;  2R17 A;  2HYP A;  4V0V A;  1UTE A;  4O4K A;  1S3M A;  1S8E A;  4H1S A;  3THO B;  4G9J A;  1QHW A;  3ICF A;  3RQZ A;  3H67 A;  4B2O A;  2WDF A;  2BDX A;  4H2I A;  3ZU0 A;  2WDD A;  1V73 A;  4FBQ A;  3RL3 A;  3E7A A;  2IE4 C;  3ZTV A;  2YEQ A; 
#chains in the Genus database with same CATH homology
 3PSO A;  4J6O A;  1G5B A;  2CV9 A;  2Z72 A;  3K7W C;  3QFO A;  1HP1 A;  3AUZ A;  4UT3 A;  5IOH A;  4MP0 A;  4DHL A;  4O24 A;  4FCX A;  3DSC A;  4I5L C;  2ZOA A;  5C1V A;  5B8I A;  5F3W A;  2NYM C;  3H69 A;  3FLO A;  4XPN A;  2KKN A;  3H60 A;  3IB8 A;  4KBP A;  4KKZ A;  3RL5 A;  5GTU A;  2NXF A;  4Q7F A;  3V4Y A;  1HPU A;  3H64 A;  4M0V A;  4MOY A;  3P71 C;  4TUG A;  3HVQ A;  3IB7 A;  4DT2 A;  1KBP A;  1U32 A;  3IVE A;  3C9F A;  5INB A;  4ORC A;  2ZBM A;  4H1Y P;  3QG5 C;  5J28 A;  4O43 A;  4IL1 A;  2BCD A;  2WDC A;  2GJU A;  4ORB A;  2Z1A A;  2QFP A;  1S3L A;  3AV0 A;  5JPE A;  4YKE A;  3DSD A;  3QFM A;  2Z06 A;  3CK2 A;  1S95 A;  3DW8 C;  4HD0 A;  1OIE A;  3JYF A;  4UT3 B;  1NNW A;  4ZVZ A;  3RL4 A;  3KBP A;  3QFK A;  4IYP C;  1Z2X A;  3E0J A;  3IVD A;  4H2G A;  4V0X A;  5JPF A;  2DXN A;  1S70 A;  3H63 A;  4LAC C;  1SU1 A;  5EQV A;  2Q8U A;  3K7V C;  1UF3 A;  3PSN A;  4UT2 A;  1OID A;  2QJC A;  1M63 A;  2DFJ A;  1FJM A;  2NPP C;  1XZW A;  1AUI A;  2HYO A;  2O8G A;  1T70 A;  3H62 B;  4DSY A;  1JK7 A;  3QFN A;  2XMO A;  3EGG A;  1XM7 A;  1OI8 A;  2IAE C;  1T71 A;  1HO5 A;  1IT6 A;  1QFC A;  3N5U A;  3H66 A;  4LU9 A;  2JOG A;  2YVT A;  2USH A;  4H2B A;  1S3N A;  4FBW A;  4UWQ A;  4I5N C;  4NZV A;  2AHD A;  5JJT A;  1W24 A;  4MOV A;  1MF8 A;  4ZX2 A;  1II7 A;  3GVE A;  1WAR A;  2DXL A;  2ZO9 B;  4FBK A;  4H2F A;  4JA9 A;  3LL8 A;  4V0W A;  4LTY A;  3TGH A;  3T1I A;  5HPE A;  1Z2W A;  3H61 A;  2WDE A;  3C5W C;  3EGH A;  3E7B A;  4O5G A;  1TCO A;  2NYL C;  4F0Z A;  2IE3 C;  4OR9 A;  4JA7 A;  2HY1 A;  4TUI A;  2A22 A;  4ORA A;  5DNY A;  4WWL A;  3D03 A;  1USH A;  3H68 A;  3THN A;  2QFR A;  1WAO 1;  2O8A A;  3FGA C;  2BQ8 X;  2P6B A;  2R17 A;  2HYP A;  4V0V A;  1UTE A;  4O4K A;  1S3M A;  1S8E A;  4H1S A;  3THO B;  4G9J A;  1QHW A;  3ICF A;  3RQZ A;  3H67 A;  4B2O A;  2WDF A;  2BDX A;  4H2I A;  3ZU0 A;  2WDD A;  1V73 A;  4FBQ A;  3RL3 A;  3E7A A;  2IE4 C;  3ZTV A;  2YEQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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