4XPNA

Crystal structure of protein phosphate 1 complexed with pp1 binding domain of gadd34
Total Genus 105
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
105
sequence length
296
structure length
296
Chain Sequence
MGSLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Homo sapiens
publication title Structural and Functional Analysis of the GADD34:PP1 eIF2 alpha Phosphatase.
pubmed doi rcsb
molecule keywords Serine/threonine-protein phosphatase PP1-alpha catalytic sub
total genus 105
structure length 296
sequence length 296
chains with identical sequence C
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2015-01-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF16891 STPPase_N Serine-threonine protein phosphatase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4xpnA00
1M63A 1FJMA 2USHA 4FBKA 2HYOA 4UWQA 3QFNA 3H69A 4H2FA 2AHDA 4MOVA 1NNWA 3K7VC 4H2GA 1USHA 4ORBA 1T70A 2KKNA 4MOYA 4UT2A 2NYLC 2WDFA 2ZBMA 1XM7A 2WDEA 4M0VA 4ZVZA 2GJUA 3RL3A 4DHLA 3IVEA 3V4YA 1HO5A 1OIDA 4Q7FA 1AUIA 4NZVA 4B2OA 3HVQA 2HY1A 4O5GA 4I5NC 4FBQA 3CK2A 3H61A 4UT3A 4V0VA 1QHWA 5JPEA 1S70A 2O8GA 3EGHA 4KKZA 3PSOA 3AV0A 1T71A 5HPEA 3H67A 3IVDA 4HD0A 4V0WA 5J28A 2DFJA 4J6OA 3T1IA 4DSYA 4O24A 4LACC 2QFRA 3E7BA 1TCOA 5GTUA 3K7WC 1UTEA 3THOB 2NPPC 1Z2WA 3FGAC 5F3WA 3C9FA 4G9JA 3AUZA 4JA9A 3H60A 4F0ZA 2BQ8X 3QFMA 3DW8C 4FCXA 1S3MA 3N5UA 3ZTVA 4H1YP 3EGGA 1WAO1 5IOHA 2Q8UA 5JJTA 4WWLA 4KBPA 2A22A 4IYPC 4O4KA 3DSCA 3QG5C 2CV9A 4DT2A 1WARA 1S3LA 2XMOA 5EQVA 3H63A 2BDXA 3RL5A 4H2IA 3H62B 1W24A 2YVTA 4MP0A 3ICFA 4JA7A 2O8AA 1II7A 3QFOA 4I5LC 1KBPA 4FBWA 4LTYA 3ZU0A 4ORCA 1IT6A 4V0XA 4LU9A 5DNYA 2JOGA 4ORAA 1XZWA 1V73A 3H66A 5C1VA 3P71C 1U32A 3RL4A 4O43A 3RQZA 3DSDA 1UF3A 1HPUA 3GVEA 3H64A 3H68A 1SU1A 4OR9A 4XPNA 5B8IA 2WDDA 5INBA 1HP1A 3IB8A 2Z06A 2BCDA 4UT3B 3PSNA 1MF8A 1OI8A 2IAEC 1S8EA 2WDCA 2NYMC 1G5BA 2R17A 4IL1A 3LL8A 3E7AA 1S3NA 2P6BA 5JPFA 4H2BA 1OIEA 2NXFA 3TGHA 2Z1AA 3THNA 2QJCA 3KBPA 2IE4C 3JYFA 4TUGA 1Z2XA 4ZX2A 2IE3C 4TUIA 2HYPA 4YKEA 3QFKA 1JK7A 2QFPA 3IB7A 1S95A 4H1SA 3C5WC 2Z72A 1QFCA
chains in the Genus database with same CATH superfamily
1M63A 1FJMA 2USHA 4FBKA 2HYOA 4UWQA 3QFNA 3H69A 4H2FA 2AHDA 4MOVA 1NNWA 3K7VC 4H2GA 1USHA 4ORBA 1T70A 2KKNA 4MOYA 4UT2A 2NYLC 2WDFA 2ZBMA 1XM7A 2WDEA 3E0JA 4M0VA 4ZVZA 2GJUA 3RL3A 4DHLA 3IVEA 3V4YA 1HO5A 1OIDA 2DXNA 4Q7FA 1AUIA 4NZVA 4B2OA 2ZO9B 3HVQA 2HY1A 4O5GA 4I5NC 4FBQA 3CK2A 3H61A 4UT3A 4V0VA 1QHWA 5JPEA 1S70A 2O8GA 3EGHA 4KKZA 3PSOA 3AV0A 1T71A 5HPEA 3H67A 3IVDA 4HD0A 4V0WA 5J28A 2DFJA 4J6OA 3T1IA 4DSYA 4O24A 4LACC 2QFRA 3E7BA 1TCOA 5GTUA 3K7WC 1UTEA 3THOB 2NPPC 1Z2WA 3FGAC 5F3WA 3C9FA 4G9JA 3AUZA 4JA9A 3H60A 4F0ZA 2BQ8X 3QFMA 3DW8C 4FCXA 1S3MA 3N5UA 3ZTVA 4H1YP 3EGGA 1WAO1 5IOHA 2Q8UA 5JJTA 4WWLA 4KBPA 2A22A 4IYPC 4O4KA 3DSCA 3QG5C 2CV9A 4DT2A 1WARA 1S3LA 2XMOA 5EQVA 3H63A 2BDXA 2YEQA 4H2IA 3RL5A 3H62B 1W24A 2YVTA 4MP0A 3ICFA 2ZOAA 2O8AA 1II7A 3QFOA 4I5LC 1KBPA 4FBWA 4JA7A 4LTYA 3ZU0A 4ORCA 1IT6A 4V0XA 4LU9A 5DNYA 2JOGA 4ORAA 1XZWA 1V73A 3H66A 5C1VA 3P71C 1U32A 3RL4A 4O43A 3RQZA 3DSDA 1UF3A 1HPUA 3GVEA 3H64A 3H68A 1SU1A 4OR9A 3D03A 4XPNA 2WDDA 5B8IA 5INBA 1HP1A 3IB8A 2Z06A 2BCDA 4UT3B 3PSNA 1MF8A 1OI8A 3FLOA 2IAEC 1S8EA 2WDCA 2NYMC 1G5BA 2R17A 4IL1A 3LL8A 3E7AA 1S3NA 2P6BA 5JPFA 4H2BA 1OIEA 2NXFA 3TGHA 2Z1AA 3THNA 2DXLA 2QJCA 3KBPA 2IE4C 3JYFA 4TUGA 1Z2XA 4ZX2A 2IE3C 4TUIA 2HYPA 4YKEA 3QFKA 1JK7A 2QFPA 3IB7A 1S95A 4H1SA 3C5WC 2Z72A 1QFCA
chains in the Genus database with same CATH topology
1M63A 1FJMA 2USHA 4FBKA 2HYOA 4UWQA 3QFNA 3H69A 4H2FA 2AHDA 4MOVA 1NNWA 3K7VC 4H2GA 1USHA 4ORBA 1T70A 2KKNA 4MOYA 4UT2A 2NYLC 2WDFA 2ZBMA 1XM7A 2WDEA 3E0JA 4M0VA 4ZVZA 2GJUA 3RL3A 4DHLA 3IVEA 3V4YA 1HO5A 1OIDA 2DXNA 4Q7FA 1AUIA 4NZVA 4B2OA 2ZO9B 3HVQA 2HY1A 4O5GA 4I5NC 4FBQA 3CK2A 3H61A 4UT3A 4V0VA 1QHWA 5JPEA 1S70A 2O8GA 3EGHA 4KKZA 3PSOA 3AV0A 1T71A 5HPEA 3H67A 3IVDA 4HD0A 4V0WA 5J28A 2DFJA 4J6OA 3T1IA 4DSYA 4O24A 4LACC 2QFRA 3E7BA 1TCOA 5GTUA 3K7WC 1UTEA 3THOB 2NPPC 1Z2WA 3FGAC 5F3WA 3C9FA 4G9JA 3AUZA 4JA9A 3H60A 4F0ZA 2BQ8X 3QFMA 3DW8C 4FCXA 1S3MA 3N5UA 3ZTVA 4H1YP 3EGGA 1WAO1 5IOHA 2Q8UA 5JJTA 4WWLA 4KBPA 2A22A 4IYPC 4O4KA 3DSCA 3QG5C 2CV9A 4DT2A 1WARA 1S3LA 2XMOA 5EQVA 3H63A 2BDXA 2YEQA 4H2IA 3RL5A 3H62B 1W24A 2YVTA 4MP0A 3ICFA 2ZOAA 2O8AA 1II7A 3QFOA 4I5LC 1KBPA 4FBWA 4JA7A 4LTYA 3ZU0A 4ORCA 1IT6A 4V0XA 4LU9A 5DNYA 2JOGA 4ORAA 1XZWA 1V73A 3H66A 5C1VA 3P71C 1U32A 3RL4A 4O43A 3RQZA 3DSDA 1UF3A 1HPUA 3GVEA 3H64A 3H68A 1SU1A 4OR9A 3D03A 4XPNA 2WDDA 5B8IA 5INBA 1HP1A 3IB8A 2Z06A 2BCDA 4UT3B 3PSNA 1MF8A 1OI8A 3FLOA 2IAEC 1S8EA 2WDCA 2NYMC 1G5BA 2R17A 4IL1A 3LL8A 3E7AA 1S3NA 2P6BA 5JPFA 4H2BA 1OIEA 2NXFA 3TGHA 2Z1AA 3THNA 2DXLA 2QJCA 3KBPA 2IE4C 3JYFA 4TUGA 1Z2XA 4ZX2A 2IE3C 4TUIA 2HYPA 4YKEA 3QFKA 1JK7A 2QFPA 3IB7A 1S95A 4H1SA 3C5WC 2Z72A 1QFCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1M63 A;  1FJM A;  2USH A;  4FBK A;  2HYO A;  4UWQ A;  3QFN A;  3H69 A;  4H2F A;  2AHD A;  4MOV A;  1NNW A;  3K7V C;  4H2G A;  1USH A;  4ORB A;  1T70 A;  2KKN A;  4MOY A;  4UT2 A;  2NYL C;  2WDF A;  2ZBM A;  1XM7 A;  2WDE A;  4M0V A;  4ZVZ A;  2GJU A;  3RL3 A;  4DHL A;  3IVE A;  3V4Y A;  1HO5 A;  1OID A;  4Q7F A;  1AUI A;  4NZV A;  4B2O A;  3HVQ A;  2HY1 A;  4O5G A;  4I5N C;  4FBQ A;  3CK2 A;  3H61 A;  4UT3 A;  4V0V A;  1QHW A;  5JPE A;  1S70 A;  2O8G A;  3EGH A;  4KKZ A;  3PSO A;  3AV0 A;  1T71 A;  5HPE A;  3H67 A;  3IVD A;  4HD0 A;  4V0W A;  5J28 A;  2DFJ A;  4J6O A;  3T1I A;  4DSY A;  4O24 A;  4LAC C;  2QFR A;  3E7B A;  1TCO A;  5GTU A;  3K7W C;  1UTE A;  3THO B;  2NPP C;  1Z2W A;  3FGA C;  5F3W A;  3C9F A;  4G9J A;  3AUZ A;  4JA9 A;  3H60 A;  4F0Z A;  2BQ8 X;  3QFM A;  3DW8 C;  4FCX A;  1S3M A;  3N5U A;  3ZTV A;  4H1Y P;  3EGG A;  1WAO 1;  5IOH A;  2Q8U A;  5JJT A;  4WWL A;  4KBP A;  2A22 A;  4IYP C;  4O4K A;  3DSC A;  3QG5 C;  2CV9 A;  4DT2 A;  1WAR A;  1S3L A;  2XMO A;  5EQV A;  3H63 A;  2BDX A;  3RL5 A;  4H2I A;  3H62 B;  1W24 A;  2YVT A;  4MP0 A;  3ICF A;  4JA7 A;  2O8A A;  1II7 A;  3QFO A;  4I5L C;  1KBP A;  4FBW A;  4LTY A;  3ZU0 A;  4ORC A;  1IT6 A;  4V0X A;  4LU9 A;  5DNY A;  2JOG A;  4ORA A;  1XZW A;  1V73 A;  3H66 A;  5C1V A;  3P71 C;  1U32 A;  3RL4 A;  4O43 A;  3RQZ A;  3DSD A;  1UF3 A;  1HPU A;  3GVE A;  3H64 A;  3H68 A;  1SU1 A;  4OR9 A;  4XPN A;  5B8I A;  2WDD A;  5INB A;  1HP1 A;  3IB8 A;  2Z06 A;  2BCD A;  4UT3 B;  3PSN A;  1MF8 A;  1OI8 A;  2IAE C;  1S8E A;  2WDC A;  2NYM C;  1G5B A;  2R17 A;  4IL1 A;  3LL8 A;  3E7A A;  1S3N A;  2P6B A;  5JPF A;  4H2B A;  1OIE A;  2NXF A;  3TGH A;  2Z1A A;  3THN A;  2QJC A;  3KBP A;  2IE4 C;  3JYF A;  4TUG A;  1Z2X A;  4ZX2 A;  2IE3 C;  4TUI A;  2HYP A;  4YKE A;  3QFK A;  1JK7 A;  2QFP A;  3IB7 A;  1S95 A;  4H1S A;  3C5W C;  2Z72 A;  1QFC A; 
#chains in the Genus database with same CATH topology
 1M63 A;  1FJM A;  2USH A;  4FBK A;  2HYO A;  4UWQ A;  3QFN A;  3H69 A;  4H2F A;  2AHD A;  4MOV A;  1NNW A;  3K7V C;  4H2G A;  1USH A;  4ORB A;  1T70 A;  2KKN A;  4MOY A;  4UT2 A;  2NYL C;  2WDF A;  2ZBM A;  1XM7 A;  2WDE A;  3E0J A;  4M0V A;  4ZVZ A;  2GJU A;  3RL3 A;  4DHL A;  3IVE A;  3V4Y A;  1HO5 A;  1OID A;  2DXN A;  4Q7F A;  1AUI A;  4NZV A;  4B2O A;  2ZO9 B;  3HVQ A;  2HY1 A;  4O5G A;  4I5N C;  4FBQ A;  3CK2 A;  3H61 A;  4UT3 A;  4V0V A;  1QHW A;  5JPE A;  1S70 A;  2O8G A;  3EGH A;  4KKZ A;  3PSO A;  3AV0 A;  1T71 A;  5HPE A;  3H67 A;  3IVD A;  4HD0 A;  4V0W A;  5J28 A;  2DFJ A;  4J6O A;  3T1I A;  4DSY A;  4O24 A;  4LAC C;  2QFR A;  3E7B A;  1TCO A;  5GTU A;  3K7W C;  1UTE A;  3THO B;  2NPP C;  1Z2W A;  3FGA C;  5F3W A;  3C9F A;  4G9J A;  3AUZ A;  4JA9 A;  3H60 A;  4F0Z A;  2BQ8 X;  3QFM A;  3DW8 C;  4FCX A;  1S3M A;  3N5U A;  3ZTV A;  4H1Y P;  3EGG A;  1WAO 1;  5IOH A;  2Q8U A;  5JJT A;  4WWL A;  4KBP A;  2A22 A;  4IYP C;  4O4K A;  3DSC A;  3QG5 C;  2CV9 A;  4DT2 A;  1WAR A;  1S3L A;  2XMO A;  5EQV A;  3H63 A;  2BDX A;  2YEQ A;  4H2I A;  3RL5 A;  3H62 B;  1W24 A;  2YVT A;  4MP0 A;  3ICF A;  2ZOA A;  2O8A A;  1II7 A;  3QFO A;  4I5L C;  1KBP A;  4FBW A;  4JA7 A;  4LTY A;  3ZU0 A;  4ORC A;  1IT6 A;  4V0X A;  4LU9 A;  5DNY A;  2JOG A;  4ORA A;  1XZW A;  1V73 A;  3H66 A;  5C1V A;  3P71 C;  1U32 A;  3RL4 A;  4O43 A;  3RQZ A;  3DSD A;  1UF3 A;  1HPU A;  3GVE A;  3H64 A;  3H68 A;  1SU1 A;  4OR9 A;  3D03 A;  4XPN A;  2WDD A;  5B8I A;  5INB A;  1HP1 A;  3IB8 A;  2Z06 A;  2BCD A;  4UT3 B;  3PSN A;  1MF8 A;  1OI8 A;  3FLO A;  2IAE C;  1S8E A;  2WDC A;  2NYM C;  1G5B A;  2R17 A;  4IL1 A;  3LL8 A;  3E7A A;  1S3N A;  2P6B A;  5JPF A;  4H2B A;  1OIE A;  2NXF A;  3TGH A;  2Z1A A;  3THN A;  2DXL A;  2QJC A;  3KBP A;  2IE4 C;  3JYF A;  4TUG A;  1Z2X A;  4ZX2 A;  2IE3 C;  4TUI A;  2HYP A;  4YKE A;  3QFK A;  1JK7 A;  2QFP A;  3IB7 A;  1S95 A;  4H1S A;  3C5W C;  2Z72 A;  1QFC A; 
#chains in the Genus database with same CATH homology
 1M63 A;  1FJM A;  2USH A;  4FBK A;  2HYO A;  4UWQ A;  3QFN A;  3H69 A;  4H2F A;  2AHD A;  4MOV A;  1NNW A;  3K7V C;  4H2G A;  1USH A;  4ORB A;  1T70 A;  2KKN A;  4MOY A;  4UT2 A;  2NYL C;  2WDF A;  2ZBM A;  1XM7 A;  2WDE A;  3E0J A;  4M0V A;  4ZVZ A;  2GJU A;  3RL3 A;  4DHL A;  3IVE A;  3V4Y A;  1HO5 A;  1OID A;  2DXN A;  4Q7F A;  1AUI A;  4NZV A;  4B2O A;  2ZO9 B;  3HVQ A;  2HY1 A;  4O5G A;  4I5N C;  4FBQ A;  3CK2 A;  3H61 A;  4UT3 A;  4V0V A;  1QHW A;  5JPE A;  1S70 A;  2O8G A;  3EGH A;  4KKZ A;  3PSO A;  3AV0 A;  1T71 A;  5HPE A;  3H67 A;  3IVD A;  4HD0 A;  4V0W A;  5J28 A;  2DFJ A;  4J6O A;  3T1I A;  4DSY A;  4O24 A;  4LAC C;  2QFR A;  3E7B A;  1TCO A;  5GTU A;  3K7W C;  1UTE A;  3THO B;  2NPP C;  1Z2W A;  3FGA C;  5F3W A;  3C9F A;  4G9J A;  3AUZ A;  4JA9 A;  3H60 A;  4F0Z A;  2BQ8 X;  3QFM A;  3DW8 C;  4FCX A;  1S3M A;  3N5U A;  3ZTV A;  4H1Y P;  3EGG A;  1WAO 1;  5IOH A;  2Q8U A;  5JJT A;  4WWL A;  4KBP A;  2A22 A;  4IYP C;  4O4K A;  3DSC A;  3QG5 C;  2CV9 A;  4DT2 A;  1WAR A;  1S3L A;  2XMO A;  5EQV A;  3H63 A;  2BDX A;  2YEQ A;  4H2I A;  3RL5 A;  3H62 B;  1W24 A;  2YVT A;  4MP0 A;  3ICF A;  2ZOA A;  2O8A A;  1II7 A;  3QFO A;  4I5L C;  1KBP A;  4FBW A;  4JA7 A;  4LTY A;  3ZU0 A;  4ORC A;  1IT6 A;  4V0X A;  4LU9 A;  5DNY A;  2JOG A;  4ORA A;  1XZW A;  1V73 A;  3H66 A;  5C1V A;  3P71 C;  1U32 A;  3RL4 A;  4O43 A;  3RQZ A;  3DSD A;  1UF3 A;  1HPU A;  3GVE A;  3H64 A;  3H68 A;  1SU1 A;  4OR9 A;  3D03 A;  4XPN A;  2WDD A;  5B8I A;  5INB A;  1HP1 A;  3IB8 A;  2Z06 A;  2BCD A;  4UT3 B;  3PSN A;  1MF8 A;  1OI8 A;  3FLO A;  2IAE C;  1S8E A;  2WDC A;  2NYM C;  1G5B A;  2R17 A;  4IL1 A;  3LL8 A;  3E7A A;  1S3N A;  2P6B A;  5JPF A;  4H2B A;  1OIE A;  2NXF A;  3TGH A;  2Z1A A;  3THN A;  2DXL A;  2QJC A;  3KBP A;  2IE4 C;  3JYF A;  4TUG A;  1Z2X A;  4ZX2 A;  2IE3 C;  4TUI A;  2HYP A;  4YKE A;  3QFK A;  1JK7 A;  2QFP A;  3IB7 A;  1S95 A;  4H1S A;  3C5W C;  2Z72 A;  1QFC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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