1QFCA

Structure of rat purple acid phosphatase
Total Genus 75
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
75
sequence length
302
structure length
287
Chain Sequence
TAPASTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQIMGADFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSVARTQLSWLKKQLAAAKEDYVLVAGHYPIWSIAEHGPTRCLVKNLRPLLAAYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSVRHQRKVPNGYLRFHYGSEDSLGGFTYVEIGSKEMSITYVEASGKSLFKTSLPR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords PROTEIN (PURPLE ACID PHOSPHATASE)
publication title Crystal structure of a mammalian purple acid phosphatase.
pubmed doi rcsb
source organism Rattus norvegicus
molecule tags Hydrolase
total genus 75
structure length 287
sequence length 302
ec nomenclature ec 3.1.3.2: Acid phosphatase.
pdb deposition date 1999-04-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 1qfcA00
3CK2A 5DNYA 5C1VA 4DHLA 4KBPA 2GJUA 4NZVA 4O43A 3K7WC 3RL4A 2NXFA 2Z72A 4ORCA 3K7VC 2HY1A 1QHWA 2AHDA 4LU9A 3H67A 4H2IA 4ORBA 3H64A 1G5BA 3IVEA 2Q8UA 3QFOA 3QG5C 1AUIA 2P6BA 2NYLC 3FGAC 3ZTVA 5JJTA 1WAO1 3IB8A 1OIEA 3RQZA 4JA7A 4TUIA 2QFRA 3V4YA 3H66A 4O4KA 3RL5A 3GVEA 4H2FA 3THNA 1W24A 5INBA 1Z2WA 3QFNA 2QJCA 5HPEA 2WDDA 1HO5A 4MOVA 4DT2A 3DSCA 1S8EA 1JK7A 1QFCA 4UT3B 3AV0A 2IE4C 4O5GA 4I5LC 2ZBMA 5F3WA 3QFMA 2A22A 3IB7A 3H62B 3KBPA 1UF3A 1V73A 1II7A 1KBPA 1HP1A 4FBQA 4JA9A 4OR9A 4TUGA 4WWLA 3THOB 2DFJA 2HYOA 1UTEA 2NPPC 2QFPA 3DSDA 4H1YP 3HVQA 2WDCA 3IVDA 4UWQA 4ORAA 4M0VA 1SU1A 4B2OA 4IYPC 4H2BA 4YKEA 3TGHA 2JOGA 2YVTA 2USHA 3C5WC 4IL1A 1T71A 3EGGA 3N5UA 4H1SA 4I5NC 1WARA 4LTYA 2BDXA 1HPUA 4V0WA 2IE3C 4V0VA 4F0ZA 4UT2A 4G9JA 4HD0A 5J28A 1USHA 5EQVA 4UT3A 3PSNA 2O8AA 4ZX2A 1IT6A 3H68A 3ZU0A 3AUZA 4O24A 4XPNA 3H60A 4DSYA 4FCXA 1M63A 4J6OA 5GTUA 3EGHA 2R17A 3JYFA 3C9FA 2O8GA 5JPEA 3RL3A 4H2GA 2HYPA 3ICFA 4ZVZA 2IAEC 2KKNA 5JPFA 2XMOA 3LL8A 1MF8A 2NYMC 1TCOA 1T70A 1S3MA 5B8IA 2Z1AA 1FJMA 3T1IA 2BQ8X 4MP0A 2WDFA 4LACC 1Z2XA 1S95A 3H69A 4KKZA 3H61A 1OI8A 2WDEA 4FBWA 4Q7FA 1NNWA 1S70A 4V0XA 2BCDA 1OIDA 3PSOA 1S3NA 1XM7A 2CV9A 3P71C 3DW8C 3E7AA 1S3LA 1XZWA 5IOHA 4MOYA 1U32A 4FBKA 3E7BA 2Z06A 3H63A 3QFKA
chains in the Genus database with same CATH superfamily
3CK2A 5DNYA 5C1VA 4DHLA 4KBPA 2GJUA 4NZVA 4O43A 3K7WC 3FLOA 2NXFA 3RL4A 2Z72A 4ORCA 3K7VC 2HY1A 1QHWA 2AHDA 4LU9A 3H67A 4H2IA 4ORBA 3H64A 1G5BA 3IVEA 2Q8UA 3QFOA 3QG5C 2YEQA 1AUIA 2P6BA 2NYLC 3FGAC 3ZTVA 5JJTA 1WAO1 3IB8A 1OIEA 3RQZA 4JA7A 4TUIA 2QFRA 3V4YA 3H66A 4O4KA 3RL5A 3GVEA 4H2FA 3THNA 1W24A 5INBA 1Z2WA 3QFNA 2QJCA 5HPEA 2WDDA 1HO5A 4MOVA 4DT2A 3DSCA 2ZO9B 1S8EA 1JK7A 1QFCA 4UT3B 3AV0A 2IE4C 4O5GA 3D03A 3E0JA 4I5LC 2ZBMA 5F3WA 3QFMA 2A22A 3IB7A 3H62B 3KBPA 1UF3A 1V73A 1II7A 1KBPA 1HP1A 4FBQA 4JA9A 4OR9A 4TUGA 4WWLA 3THOB 2DFJA 2HYOA 1UTEA 2NPPC 2QFPA 3DSDA 4H1YP 3HVQA 2WDCA 3IVDA 4UWQA 4ORAA 4M0VA 1SU1A 4B2OA 4IYPC 4H2BA 4YKEA 3TGHA 2DXNA 2JOGA 2YVTA 2USHA 3C5WC 4IL1A 1T71A 3EGGA 3N5UA 4H1SA 4I5NC 1WARA 4LTYA 2BDXA 1HPUA 4V0WA 2IE3C 4V0VA 4F0ZA 4UT2A 4G9JA 4HD0A 5J28A 1USHA 5EQVA 4UT3A 3PSNA 2O8AA 4ZX2A 1IT6A 3H68A 3ZU0A 3AUZA 4O24A 2DXLA 4XPNA 3H60A 4DSYA 4FCXA 1M63A 4J6OA 5GTUA 3EGHA 2R17A 3JYFA 3C9FA 2O8GA 2ZOAA 3RL3A 5JPEA 4H2GA 2HYPA 3ICFA 4ZVZA 2IAEC 2KKNA 5JPFA 2XMOA 3LL8A 1MF8A 2NYMC 1TCOA 1T70A 1S3MA 5B8IA 2Z1AA 1FJMA 3T1IA 2BQ8X 4MP0A 2WDFA 4LACC 1Z2XA 1S95A 3H69A 4KKZA 3H61A 1OI8A 2WDEA 4FBWA 4Q7FA 1NNWA 1S70A 4V0XA 2BCDA 1OIDA 3PSOA 1S3NA 1XM7A 2CV9A 3P71C 3DW8C 3E7AA 1S3LA 1XZWA 5IOHA 4MOYA 1U32A 4FBKA 3E7BA 2Z06A 3H63A 3QFKA
chains in the Genus database with same CATH topology
3CK2A 5DNYA 5C1VA 4DHLA 4KBPA 2GJUA 4NZVA 4O43A 3K7WC 3FLOA 2NXFA 3RL4A 2Z72A 4ORCA 3K7VC 2HY1A 1QHWA 2AHDA 4LU9A 3H67A 4H2IA 4ORBA 3H64A 1G5BA 3IVEA 2Q8UA 3QFOA 3QG5C 2YEQA 1AUIA 2P6BA 2NYLC 3FGAC 3ZTVA 5JJTA 1WAO1 3IB8A 1OIEA 3RQZA 4JA7A 4TUIA 2QFRA 3V4YA 3H66A 4O4KA 3RL5A 3GVEA 4H2FA 3THNA 1W24A 5INBA 1Z2WA 3QFNA 2QJCA 5HPEA 2WDDA 1HO5A 4MOVA 4DT2A 3DSCA 2ZO9B 1S8EA 1JK7A 1QFCA 4UT3B 3AV0A 2IE4C 4O5GA 3D03A 3E0JA 4I5LC 2ZBMA 5F3WA 3QFMA 2A22A 3IB7A 3H62B 3KBPA 1UF3A 1V73A 1II7A 1KBPA 1HP1A 4FBQA 4JA9A 4OR9A 4TUGA 4WWLA 3THOB 2DFJA 2HYOA 1UTEA 2NPPC 2QFPA 3DSDA 4H1YP 3HVQA 2WDCA 3IVDA 4UWQA 4ORAA 4M0VA 1SU1A 4B2OA 4IYPC 4H2BA 4YKEA 3TGHA 2DXNA 2JOGA 2YVTA 2USHA 3C5WC 4IL1A 1T71A 3EGGA 3N5UA 4H1SA 4I5NC 1WARA 4LTYA 2BDXA 1HPUA 4V0WA 2IE3C 4V0VA 4F0ZA 4UT2A 4G9JA 4HD0A 5J28A 1USHA 5EQVA 4UT3A 3PSNA 2O8AA 4ZX2A 1IT6A 3H68A 3ZU0A 3AUZA 4O24A 2DXLA 4XPNA 3H60A 4DSYA 4FCXA 1M63A 4J6OA 5GTUA 3EGHA 2R17A 3JYFA 3C9FA 2O8GA 2ZOAA 3RL3A 5JPEA 4H2GA 2HYPA 3ICFA 4ZVZA 2IAEC 2KKNA 5JPFA 2XMOA 3LL8A 1MF8A 2NYMC 1TCOA 1T70A 1S3MA 5B8IA 2Z1AA 1FJMA 3T1IA 2BQ8X 4MP0A 2WDFA 4LACC 1Z2XA 1S95A 3H69A 4KKZA 3H61A 1OI8A 2WDEA 4FBWA 4Q7FA 1NNWA 1S70A 4V0XA 2BCDA 1OIDA 3PSOA 1S3NA 1XM7A 2CV9A 3P71C 3DW8C 3E7AA 1S3LA 1XZWA 5IOHA 4MOYA 1U32A 4FBKA 3E7BA 2Z06A 3H63A 3QFKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CK2 A;  5DNY A;  5C1V A;  4DHL A;  4KBP A;  2GJU A;  4NZV A;  4O43 A;  3K7W C;  3RL4 A;  2NXF A;  2Z72 A;  4ORC A;  3K7V C;  2HY1 A;  1QHW A;  2AHD A;  4LU9 A;  3H67 A;  4H2I A;  4ORB A;  3H64 A;  1G5B A;  3IVE A;  2Q8U A;  3QFO A;  3QG5 C;  1AUI A;  2P6B A;  2NYL C;  3FGA C;  3ZTV A;  5JJT A;  1WAO 1;  3IB8 A;  1OIE A;  3RQZ A;  4JA7 A;  4TUI A;  2QFR A;  3V4Y A;  3H66 A;  4O4K A;  3RL5 A;  3GVE A;  4H2F A;  3THN A;  1W24 A;  5INB A;  1Z2W A;  3QFN A;  2QJC A;  5HPE A;  2WDD A;  1HO5 A;  4MOV A;  4DT2 A;  3DSC A;  1S8E A;  1JK7 A;  1QFC A;  4UT3 B;  3AV0 A;  2IE4 C;  4O5G A;  4I5L C;  2ZBM A;  5F3W A;  3QFM A;  2A22 A;  3IB7 A;  3H62 B;  3KBP A;  1UF3 A;  1V73 A;  1II7 A;  1KBP A;  1HP1 A;  4FBQ A;  4JA9 A;  4OR9 A;  4TUG A;  4WWL A;  3THO B;  2DFJ A;  2HYO A;  1UTE A;  2NPP C;  2QFP A;  3DSD A;  4H1Y P;  3HVQ A;  2WDC A;  3IVD A;  4UWQ A;  4ORA A;  4M0V A;  1SU1 A;  4B2O A;  4IYP C;  4H2B A;  4YKE A;  3TGH A;  2JOG A;  2YVT A;  2USH A;  3C5W C;  4IL1 A;  1T71 A;  3EGG A;  3N5U A;  4H1S A;  4I5N C;  1WAR A;  4LTY A;  2BDX A;  1HPU A;  4V0W A;  2IE3 C;  4V0V A;  4F0Z A;  4UT2 A;  4G9J A;  4HD0 A;  5J28 A;  1USH A;  5EQV A;  4UT3 A;  3PSN A;  2O8A A;  4ZX2 A;  1IT6 A;  3H68 A;  3ZU0 A;  3AUZ A;  4O24 A;  4XPN A;  3H60 A;  4DSY A;  4FCX A;  1M63 A;  4J6O A;  5GTU A;  3EGH A;  2R17 A;  3JYF A;  3C9F A;  2O8G A;  5JPE A;  3RL3 A;  4H2G A;  2HYP A;  3ICF A;  4ZVZ A;  2IAE C;  2KKN A;  5JPF A;  2XMO A;  3LL8 A;  1MF8 A;  2NYM C;  1TCO A;  1T70 A;  1S3M A;  5B8I A;  2Z1A A;  1FJM A;  3T1I A;  2BQ8 X;  4MP0 A;  2WDF A;  4LAC C;  1Z2X A;  1S95 A;  3H69 A;  4KKZ A;  3H61 A;  1OI8 A;  2WDE A;  4FBW A;  4Q7F A;  1NNW A;  1S70 A;  4V0X A;  2BCD A;  1OID A;  3PSO A;  1S3N A;  1XM7 A;  2CV9 A;  3P71 C;  3DW8 C;  3E7A A;  1S3L A;  1XZW A;  5IOH A;  4MOY A;  1U32 A;  4FBK A;  3E7B A;  2Z06 A;  3H63 A;  3QFK A; 
#chains in the Genus database with same CATH topology
 3CK2 A;  5DNY A;  5C1V A;  4DHL A;  4KBP A;  2GJU A;  4NZV A;  4O43 A;  3K7W C;  3FLO A;  2NXF A;  3RL4 A;  2Z72 A;  4ORC A;  3K7V C;  2HY1 A;  1QHW A;  2AHD A;  4LU9 A;  3H67 A;  4H2I A;  4ORB A;  3H64 A;  1G5B A;  3IVE A;  2Q8U A;  3QFO A;  3QG5 C;  2YEQ A;  1AUI A;  2P6B A;  2NYL C;  3FGA C;  3ZTV A;  5JJT A;  1WAO 1;  3IB8 A;  1OIE A;  3RQZ A;  4JA7 A;  4TUI A;  2QFR A;  3V4Y A;  3H66 A;  4O4K A;  3RL5 A;  3GVE A;  4H2F A;  3THN A;  1W24 A;  5INB A;  1Z2W A;  3QFN A;  2QJC A;  5HPE A;  2WDD A;  1HO5 A;  4MOV A;  4DT2 A;  3DSC A;  2ZO9 B;  1S8E A;  1JK7 A;  1QFC A;  4UT3 B;  3AV0 A;  2IE4 C;  4O5G A;  3D03 A;  3E0J A;  4I5L C;  2ZBM A;  5F3W A;  3QFM A;  2A22 A;  3IB7 A;  3H62 B;  3KBP A;  1UF3 A;  1V73 A;  1II7 A;  1KBP A;  1HP1 A;  4FBQ A;  4JA9 A;  4OR9 A;  4TUG A;  4WWL A;  3THO B;  2DFJ A;  2HYO A;  1UTE A;  2NPP C;  2QFP A;  3DSD A;  4H1Y P;  3HVQ A;  2WDC A;  3IVD A;  4UWQ A;  4ORA A;  4M0V A;  1SU1 A;  4B2O A;  4IYP C;  4H2B A;  4YKE A;  3TGH A;  2DXN A;  2JOG A;  2YVT A;  2USH A;  3C5W C;  4IL1 A;  1T71 A;  3EGG A;  3N5U A;  4H1S A;  4I5N C;  1WAR A;  4LTY A;  2BDX A;  1HPU A;  4V0W A;  2IE3 C;  4V0V A;  4F0Z A;  4UT2 A;  4G9J A;  4HD0 A;  5J28 A;  1USH A;  5EQV A;  4UT3 A;  3PSN A;  2O8A A;  4ZX2 A;  1IT6 A;  3H68 A;  3ZU0 A;  3AUZ A;  4O24 A;  2DXL A;  4XPN A;  3H60 A;  4DSY A;  4FCX A;  1M63 A;  4J6O A;  5GTU A;  3EGH A;  2R17 A;  3JYF A;  3C9F A;  2O8G A;  2ZOA A;  3RL3 A;  5JPE A;  4H2G A;  2HYP A;  3ICF A;  4ZVZ A;  2IAE C;  2KKN A;  5JPF A;  2XMO A;  3LL8 A;  1MF8 A;  2NYM C;  1TCO A;  1T70 A;  1S3M A;  5B8I A;  2Z1A A;  1FJM A;  3T1I A;  2BQ8 X;  4MP0 A;  2WDF A;  4LAC C;  1Z2X A;  1S95 A;  3H69 A;  4KKZ A;  3H61 A;  1OI8 A;  2WDE A;  4FBW A;  4Q7F A;  1NNW A;  1S70 A;  4V0X A;  2BCD A;  1OID A;  3PSO A;  1S3N A;  1XM7 A;  2CV9 A;  3P71 C;  3DW8 C;  3E7A A;  1S3L A;  1XZW A;  5IOH A;  4MOY A;  1U32 A;  4FBK A;  3E7B A;  2Z06 A;  3H63 A;  3QFK A; 
#chains in the Genus database with same CATH homology
 3CK2 A;  5DNY A;  5C1V A;  4DHL A;  4KBP A;  2GJU A;  4NZV A;  4O43 A;  3K7W C;  3FLO A;  2NXF A;  3RL4 A;  2Z72 A;  4ORC A;  3K7V C;  2HY1 A;  1QHW A;  2AHD A;  4LU9 A;  3H67 A;  4H2I A;  4ORB A;  3H64 A;  1G5B A;  3IVE A;  2Q8U A;  3QFO A;  3QG5 C;  2YEQ A;  1AUI A;  2P6B A;  2NYL C;  3FGA C;  3ZTV A;  5JJT A;  1WAO 1;  3IB8 A;  1OIE A;  3RQZ A;  4JA7 A;  4TUI A;  2QFR A;  3V4Y A;  3H66 A;  4O4K A;  3RL5 A;  3GVE A;  4H2F A;  3THN A;  1W24 A;  5INB A;  1Z2W A;  3QFN A;  2QJC A;  5HPE A;  2WDD A;  1HO5 A;  4MOV A;  4DT2 A;  3DSC A;  2ZO9 B;  1S8E A;  1JK7 A;  1QFC A;  4UT3 B;  3AV0 A;  2IE4 C;  4O5G A;  3D03 A;  3E0J A;  4I5L C;  2ZBM A;  5F3W A;  3QFM A;  2A22 A;  3IB7 A;  3H62 B;  3KBP A;  1UF3 A;  1V73 A;  1II7 A;  1KBP A;  1HP1 A;  4FBQ A;  4JA9 A;  4OR9 A;  4TUG A;  4WWL A;  3THO B;  2DFJ A;  2HYO A;  1UTE A;  2NPP C;  2QFP A;  3DSD A;  4H1Y P;  3HVQ A;  2WDC A;  3IVD A;  4UWQ A;  4ORA A;  4M0V A;  1SU1 A;  4B2O A;  4IYP C;  4H2B A;  4YKE A;  3TGH A;  2DXN A;  2JOG A;  2YVT A;  2USH A;  3C5W C;  4IL1 A;  1T71 A;  3EGG A;  3N5U A;  4H1S A;  4I5N C;  1WAR A;  4LTY A;  2BDX A;  1HPU A;  4V0W A;  2IE3 C;  4V0V A;  4F0Z A;  4UT2 A;  4G9J A;  4HD0 A;  5J28 A;  1USH A;  5EQV A;  4UT3 A;  3PSN A;  2O8A A;  4ZX2 A;  1IT6 A;  3H68 A;  3ZU0 A;  3AUZ A;  4O24 A;  2DXL A;  4XPN A;  3H60 A;  4DSY A;  4FCX A;  1M63 A;  4J6O A;  5GTU A;  3EGH A;  2R17 A;  3JYF A;  3C9F A;  2O8G A;  2ZOA A;  3RL3 A;  5JPE A;  4H2G A;  2HYP A;  3ICF A;  4ZVZ A;  2IAE C;  2KKN A;  5JPF A;  2XMO A;  3LL8 A;  1MF8 A;  2NYM C;  1TCO A;  1T70 A;  1S3M A;  5B8I A;  2Z1A A;  1FJM A;  3T1I A;  2BQ8 X;  4MP0 A;  2WDF A;  4LAC C;  1Z2X A;  1S95 A;  3H69 A;  4KKZ A;  3H61 A;  1OI8 A;  2WDE A;  4FBW A;  4Q7F A;  1NNW A;  1S70 A;  4V0X A;  2BCD A;  1OID A;  3PSO A;  1S3N A;  1XM7 A;  2CV9 A;  3P71 C;  3DW8 C;  3E7A A;  1S3L A;  1XZW A;  5IOH A;  4MOY A;  1U32 A;  4FBK A;  3E7B A;  2Z06 A;  3H63 A;  3QFK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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