1V73A

Crystal structure of cold-active protein-tyrosine phosphatase of a psychrophile shewanella sp.
Total Genus 108
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
108
sequence length
331
structure length
331
Chain Sequence
TEFDGPYVITPISGQSTAYWICDNRLKTTSIEKLQVNRPEHCGDLPETKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYGADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVGKSGELLLLENNRLIRGLYDGTRETLQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords psychrophilic phosphatase I
publication title Crystal Structure of Cold-Active Protein-Tyrosine Phosphatase from a Psychrophile, Shewanella sp
pubmed doi rcsb
source organism Shewanella sp.
total genus 108
structure length 331
sequence length 331
ec nomenclature ec 3.1.3.48: Protein-tyrosine-phosphatase.
pdb deposition date 2003-12-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 1v73A00
1FJMA 2ZBMA 2HYPA 1KBPA 1TCOA 3RL5A 4FBQA 1W24A 3H61A 4HD0A 3E7BA 3AV0A 4H2IA 3DSDA 1WARA 3H64A 5DNYA 3H60A 2KKNA 3IB7A 3EGHA 1T71A 4G9JA 2O8GA 1S3NA 4H1YP 4MP0A 4OR9A 3KBPA 1II7A 5C1VA 4TUGA 1USHA 2YVTA 4UT2A 4MOVA 4V0XA 3P71C 2XMOA 2GJUA 3GVEA 1QFCA 4LU9A 3THOB 2WDCA 4I5LC 5HPEA 4ZVZA 3PSNA 4DT2A 5GTUA 3IB8A 5B8IA 1S8EA 2BQ8X 2QFPA 1UTEA 4ORBA 2Z1AA 5IOHA 3T1IA 3AUZA 1U32A 3V4YA 2HY1A 4V0WA 1Z2XA 2AHDA 1S70A 2BCDA 4LACC 3DW8C 4B2OA 4JA7A 2CV9A 2Z06A 2NPPC 1SU1A 2IAEC 3THNA 3DSCA 4TUIA 3QFKA 5JJTA 4JA9A 4J6OA 4NZVA 2WDEA 4H1SA 2NXFA 5INBA 1UF3A 3RL4A 3CK2A 3H62B 3K7VC 4DSYA 1V73A 3H67A 1S95A 3FGAC 2QFRA 1S3MA 4UWQA 4FCXA 5JPFA 4V0VA 4ORCA 3H68A 2NYLC 4FBWA 3H63A 2NYMC 2QJCA 3ICFA 2O8AA 4UT3B 1OIDA 3IVEA 4MOYA 3ZU0A 2USHA 3ZTVA 3H66A 4KKZA 4ORAA 1AUIA 3HVQA 1Z2WA 3LL8A 4O24A 3QFMA 4UT3A 4F0ZA 3RQZA 4WWLA 5F3WA 5JPEA 2DFJA 4DHLA 4M0VA 1XZWA 3RL3A 1NNWA 1T70A 4Q7FA 3PSOA 2IE4C 4H2BA 1OIEA 2HYOA 3TGHA 3C5WC 1HPUA 4YKEA 4IYPC 4LTYA 3N5UA 2P6BA 3K7WC 2BDXA 2Z72A 1M63A 2JOGA 3QFOA 4H2FA 4IL1A 1IT6A 4O4KA 4ZX2A 1MF8A 2WDFA 1G5BA 3QFNA 5EQVA 1JK7A 5J28A 1HO5A 4I5NC 3IVDA 1WAO1 4KBPA 4O5GA 1OI8A 4FBKA 3C9FA 2WDDA 3JYFA 3EGGA 3E7AA 3QG5C 1QHWA 1HP1A 4O43A 2A22A 1XM7A 3H69A 1S3LA 2Q8UA 4XPNA 2R17A 2IE3C 4H2GA
chains in the Genus database with same CATH superfamily
1FJMA 2ZBMA 2HYPA 1KBPA 1TCOA 3RL5A 4FBQA 1W24A 3H61A 4HD0A 3E7BA 3AV0A 4H2IA 3DSDA 3FLOA 1WARA 3H64A 5DNYA 3H60A 2KKNA 3IB7A 3EGHA 1T71A 4G9JA 2O8GA 1S3NA 4H1YP 4MP0A 4OR9A 3KBPA 1II7A 5C1VA 4TUGA 1USHA 2YVTA 4UT2A 4MOVA 4V0XA 3P71C 2XMOA 2GJUA 2ZO9B 3GVEA 1QFCA 4LU9A 3THOB 2WDCA 4I5LC 5HPEA 4ZVZA 3PSNA 4DT2A 5GTUA 3IB8A 5B8IA 1S8EA 2BQ8X 2QFPA 1UTEA 4ORBA 2Z1AA 5IOHA 3T1IA 3AUZA 1U32A 3V4YA 2HY1A 4V0WA 1Z2XA 2AHDA 1S70A 2BCDA 4LACC 3DW8C 4B2OA 4JA7A 2CV9A 2Z06A 2NPPC 1SU1A 2IAEC 3THNA 3DSCA 4TUIA 3QFKA 5JJTA 4JA9A 4J6OA 4NZVA 2WDEA 4H1SA 2NXFA 5INBA 1UF3A 3RL4A 3CK2A 3H62B 3K7VC 4DSYA 2DXNA 1V73A 3H67A 1S95A 3FGAC 2QFRA 1S3MA 4UWQA 4FCXA 5JPFA 4V0VA 4ORCA 3H68A 2NYLC 4FBWA 3H63A 2NYMC 2QJCA 3ICFA 2O8AA 4UT3B 1OIDA 3IVEA 4MOYA 3ZU0A 3D03A 2USHA 3ZTVA 3H66A 4KKZA 4ORAA 1AUIA 3HVQA 1Z2WA 3LL8A 4O24A 3QFMA 4UT3A 4F0ZA 3RQZA 4WWLA 5F3WA 5JPEA 2DFJA 3E0JA 4DHLA 4M0VA 1XZWA 3RL3A 1NNWA 1T70A 4Q7FA 3PSOA 2IE4C 4H2BA 1OIEA 2HYOA 3TGHA 3C5WC 1HPUA 4YKEA 4IYPC 4LTYA 3N5UA 2P6BA 3K7WC 2BDXA 2Z72A 1M63A 2JOGA 3QFOA 4H2FA 4IL1A 1IT6A 4O4KA 4ZX2A 1MF8A 2WDFA 1G5BA 3QFNA 5EQVA 1JK7A 5J28A 1HO5A 4I5NC 3IVDA 1WAO1 4KBPA 4O5GA 1OI8A 4FBKA 3C9FA 2WDDA 3JYFA 2ZOAA 2DXLA 2YEQA 3EGGA 3E7AA 3QG5C 1QHWA 1HP1A 4O43A 2A22A 1XM7A 3H69A 1S3LA 2Q8UA 4XPNA 2R17A 2IE3C 4H2GA
chains in the Genus database with same CATH topology
1FJMA 2ZBMA 2HYPA 1KBPA 1TCOA 3RL5A 4FBQA 1W24A 3H61A 4HD0A 3E7BA 3AV0A 4H2IA 3DSDA 3FLOA 1WARA 3H64A 5DNYA 3H60A 2KKNA 3IB7A 3EGHA 1T71A 4G9JA 2O8GA 1S3NA 4H1YP 4MP0A 4OR9A 3KBPA 1II7A 5C1VA 4TUGA 1USHA 2YVTA 4UT2A 4MOVA 4V0XA 3P71C 2XMOA 2GJUA 2ZO9B 3GVEA 1QFCA 4LU9A 3THOB 2WDCA 4I5LC 5HPEA 4ZVZA 3PSNA 4DT2A 5GTUA 3IB8A 5B8IA 1S8EA 2BQ8X 2QFPA 1UTEA 4ORBA 2Z1AA 5IOHA 3T1IA 3AUZA 1U32A 3V4YA 2HY1A 4V0WA 1Z2XA 2AHDA 1S70A 2BCDA 4LACC 3DW8C 4B2OA 4JA7A 2CV9A 2Z06A 2NPPC 1SU1A 2IAEC 3THNA 3DSCA 4TUIA 3QFKA 5JJTA 4JA9A 4J6OA 4NZVA 2WDEA 4H1SA 2NXFA 5INBA 1UF3A 3RL4A 3CK2A 3H62B 3K7VC 4DSYA 2DXNA 1V73A 3H67A 1S95A 3FGAC 2QFRA 1S3MA 4UWQA 4FCXA 5JPFA 4V0VA 4ORCA 3H68A 2NYLC 4FBWA 3H63A 2NYMC 2QJCA 3ICFA 2O8AA 4UT3B 1OIDA 3IVEA 4MOYA 3ZU0A 3D03A 2USHA 3ZTVA 3H66A 4KKZA 4ORAA 1AUIA 3HVQA 1Z2WA 3LL8A 4O24A 3QFMA 4UT3A 4F0ZA 3RQZA 4WWLA 5F3WA 5JPEA 2DFJA 3E0JA 4DHLA 4M0VA 1XZWA 3RL3A 1NNWA 1T70A 4Q7FA 3PSOA 2IE4C 4H2BA 1OIEA 2HYOA 3TGHA 3C5WC 1HPUA 4YKEA 4IYPC 4LTYA 3N5UA 2P6BA 3K7WC 2BDXA 2Z72A 1M63A 2JOGA 3QFOA 4H2FA 4IL1A 1IT6A 4O4KA 4ZX2A 1MF8A 2WDFA 1G5BA 3QFNA 5EQVA 1JK7A 5J28A 1HO5A 4I5NC 3IVDA 1WAO1 4KBPA 4O5GA 1OI8A 4FBKA 3C9FA 2WDDA 3JYFA 2ZOAA 2DXLA 2YEQA 3EGGA 3E7AA 3QG5C 1QHWA 1HP1A 4O43A 2A22A 1XM7A 3H69A 1S3LA 2Q8UA 4XPNA 2R17A 2IE3C 4H2GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FJM A;  2ZBM A;  2HYP A;  1KBP A;  1TCO A;  3RL5 A;  4FBQ A;  1W24 A;  3H61 A;  4HD0 A;  3E7B A;  3AV0 A;  4H2I A;  3DSD A;  1WAR A;  3H64 A;  5DNY A;  3H60 A;  2KKN A;  3IB7 A;  3EGH A;  1T71 A;  4G9J A;  2O8G A;  1S3N A;  4H1Y P;  4MP0 A;  4OR9 A;  3KBP A;  1II7 A;  5C1V A;  4TUG A;  1USH A;  2YVT A;  4UT2 A;  4MOV A;  4V0X A;  3P71 C;  2XMO A;  2GJU A;  3GVE A;  1QFC A;  4LU9 A;  3THO B;  2WDC A;  4I5L C;  5HPE A;  4ZVZ A;  3PSN A;  4DT2 A;  5GTU A;  3IB8 A;  5B8I A;  1S8E A;  2BQ8 X;  2QFP A;  1UTE A;  4ORB A;  2Z1A A;  5IOH A;  3T1I A;  3AUZ A;  1U32 A;  3V4Y A;  2HY1 A;  4V0W A;  1Z2X A;  2AHD A;  1S70 A;  2BCD A;  4LAC C;  3DW8 C;  4B2O A;  4JA7 A;  2CV9 A;  2Z06 A;  2NPP C;  1SU1 A;  2IAE C;  3THN A;  3DSC A;  4TUI A;  3QFK A;  5JJT A;  4JA9 A;  4J6O A;  4NZV A;  2WDE A;  4H1S A;  2NXF A;  5INB A;  1UF3 A;  3RL4 A;  3CK2 A;  3H62 B;  3K7V C;  4DSY A;  1V73 A;  3H67 A;  1S95 A;  3FGA C;  2QFR A;  1S3M A;  4UWQ A;  4FCX A;  5JPF A;  4V0V A;  4ORC A;  3H68 A;  2NYL C;  4FBW A;  3H63 A;  2NYM C;  2QJC A;  3ICF A;  2O8A A;  4UT3 B;  1OID A;  3IVE A;  4MOY A;  3ZU0 A;  2USH A;  3ZTV A;  3H66 A;  4KKZ A;  4ORA A;  1AUI A;  3HVQ A;  1Z2W A;  3LL8 A;  4O24 A;  3QFM A;  4UT3 A;  4F0Z A;  3RQZ A;  4WWL A;  5F3W A;  5JPE A;  2DFJ A;  4DHL A;  4M0V A;  1XZW A;  3RL3 A;  1NNW A;  1T70 A;  4Q7F A;  3PSO A;  2IE4 C;  4H2B A;  1OIE A;  2HYO A;  3TGH A;  3C5W C;  1HPU A;  4YKE A;  4IYP C;  4LTY A;  3N5U A;  2P6B A;  3K7W C;  2BDX A;  2Z72 A;  1M63 A;  2JOG A;  3QFO A;  4H2F A;  4IL1 A;  1IT6 A;  4O4K A;  4ZX2 A;  1MF8 A;  2WDF A;  1G5B A;  3QFN A;  5EQV A;  1JK7 A;  5J28 A;  1HO5 A;  4I5N C;  3IVD A;  1WAO 1;  4KBP A;  4O5G A;  1OI8 A;  4FBK A;  3C9F A;  2WDD A;  3JYF A;  3EGG A;  3E7A A;  3QG5 C;  1QHW A;  1HP1 A;  4O43 A;  2A22 A;  1XM7 A;  3H69 A;  1S3L A;  2Q8U A;  4XPN A;  2R17 A;  2IE3 C;  4H2G A; 
#chains in the Genus database with same CATH topology
 1FJM A;  2ZBM A;  2HYP A;  1KBP A;  1TCO A;  3RL5 A;  4FBQ A;  1W24 A;  3H61 A;  4HD0 A;  3E7B A;  3AV0 A;  4H2I A;  3DSD A;  3FLO A;  1WAR A;  3H64 A;  5DNY A;  3H60 A;  2KKN A;  3IB7 A;  3EGH A;  1T71 A;  4G9J A;  2O8G A;  1S3N A;  4H1Y P;  4MP0 A;  4OR9 A;  3KBP A;  1II7 A;  5C1V A;  4TUG A;  1USH A;  2YVT A;  4UT2 A;  4MOV A;  4V0X A;  3P71 C;  2XMO A;  2GJU A;  2ZO9 B;  3GVE A;  1QFC A;  4LU9 A;  3THO B;  2WDC A;  4I5L C;  5HPE A;  4ZVZ A;  3PSN A;  4DT2 A;  5GTU A;  3IB8 A;  5B8I A;  1S8E A;  2BQ8 X;  2QFP A;  1UTE A;  4ORB A;  2Z1A A;  5IOH A;  3T1I A;  3AUZ A;  1U32 A;  3V4Y A;  2HY1 A;  4V0W A;  1Z2X A;  2AHD A;  1S70 A;  2BCD A;  4LAC C;  3DW8 C;  4B2O A;  4JA7 A;  2CV9 A;  2Z06 A;  2NPP C;  1SU1 A;  2IAE C;  3THN A;  3DSC A;  4TUI A;  3QFK A;  5JJT A;  4JA9 A;  4J6O A;  4NZV A;  2WDE A;  4H1S A;  2NXF A;  5INB A;  1UF3 A;  3RL4 A;  3CK2 A;  3H62 B;  3K7V C;  4DSY A;  2DXN A;  1V73 A;  3H67 A;  1S95 A;  3FGA C;  2QFR A;  1S3M A;  4UWQ A;  4FCX A;  5JPF A;  4V0V A;  4ORC A;  3H68 A;  2NYL C;  4FBW A;  3H63 A;  2NYM C;  2QJC A;  3ICF A;  2O8A A;  4UT3 B;  1OID A;  3IVE A;  4MOY A;  3ZU0 A;  3D03 A;  2USH A;  3ZTV A;  3H66 A;  4KKZ A;  4ORA A;  1AUI A;  3HVQ A;  1Z2W A;  3LL8 A;  4O24 A;  3QFM A;  4UT3 A;  4F0Z A;  3RQZ A;  4WWL A;  5F3W A;  5JPE A;  2DFJ A;  3E0J A;  4DHL A;  4M0V A;  1XZW A;  3RL3 A;  1NNW A;  1T70 A;  4Q7F A;  3PSO A;  2IE4 C;  4H2B A;  1OIE A;  2HYO A;  3TGH A;  3C5W C;  1HPU A;  4YKE A;  4IYP C;  4LTY A;  3N5U A;  2P6B A;  3K7W C;  2BDX A;  2Z72 A;  1M63 A;  2JOG A;  3QFO A;  4H2F A;  4IL1 A;  1IT6 A;  4O4K A;  4ZX2 A;  1MF8 A;  2WDF A;  1G5B A;  3QFN A;  5EQV A;  1JK7 A;  5J28 A;  1HO5 A;  4I5N C;  3IVD A;  1WAO 1;  4KBP A;  4O5G A;  1OI8 A;  4FBK A;  3C9F A;  2WDD A;  3JYF A;  2ZOA A;  2DXL A;  2YEQ A;  3EGG A;  3E7A A;  3QG5 C;  1QHW A;  1HP1 A;  4O43 A;  2A22 A;  1XM7 A;  3H69 A;  1S3L A;  2Q8U A;  4XPN A;  2R17 A;  2IE3 C;  4H2G A; 
#chains in the Genus database with same CATH homology
 1FJM A;  2ZBM A;  2HYP A;  1KBP A;  1TCO A;  3RL5 A;  4FBQ A;  1W24 A;  3H61 A;  4HD0 A;  3E7B A;  3AV0 A;  4H2I A;  3DSD A;  3FLO A;  1WAR A;  3H64 A;  5DNY A;  3H60 A;  2KKN A;  3IB7 A;  3EGH A;  1T71 A;  4G9J A;  2O8G A;  1S3N A;  4H1Y P;  4MP0 A;  4OR9 A;  3KBP A;  1II7 A;  5C1V A;  4TUG A;  1USH A;  2YVT A;  4UT2 A;  4MOV A;  4V0X A;  3P71 C;  2XMO A;  2GJU A;  2ZO9 B;  3GVE A;  1QFC A;  4LU9 A;  3THO B;  2WDC A;  4I5L C;  5HPE A;  4ZVZ A;  3PSN A;  4DT2 A;  5GTU A;  3IB8 A;  5B8I A;  1S8E A;  2BQ8 X;  2QFP A;  1UTE A;  4ORB A;  2Z1A A;  5IOH A;  3T1I A;  3AUZ A;  1U32 A;  3V4Y A;  2HY1 A;  4V0W A;  1Z2X A;  2AHD A;  1S70 A;  2BCD A;  4LAC C;  3DW8 C;  4B2O A;  4JA7 A;  2CV9 A;  2Z06 A;  2NPP C;  1SU1 A;  2IAE C;  3THN A;  3DSC A;  4TUI A;  3QFK A;  5JJT A;  4JA9 A;  4J6O A;  4NZV A;  2WDE A;  4H1S A;  2NXF A;  5INB A;  1UF3 A;  3RL4 A;  3CK2 A;  3H62 B;  3K7V C;  4DSY A;  2DXN A;  1V73 A;  3H67 A;  1S95 A;  3FGA C;  2QFR A;  1S3M A;  4UWQ A;  4FCX A;  5JPF A;  4V0V A;  4ORC A;  3H68 A;  2NYL C;  4FBW A;  3H63 A;  2NYM C;  2QJC A;  3ICF A;  2O8A A;  4UT3 B;  1OID A;  3IVE A;  4MOY A;  3ZU0 A;  3D03 A;  2USH A;  3ZTV A;  3H66 A;  4KKZ A;  4ORA A;  1AUI A;  3HVQ A;  1Z2W A;  3LL8 A;  4O24 A;  3QFM A;  4UT3 A;  4F0Z A;  3RQZ A;  4WWL A;  5F3W A;  5JPE A;  2DFJ A;  3E0J A;  4DHL A;  4M0V A;  1XZW A;  3RL3 A;  1NNW A;  1T70 A;  4Q7F A;  3PSO A;  2IE4 C;  4H2B A;  1OIE A;  2HYO A;  3TGH A;  3C5W C;  1HPU A;  4YKE A;  4IYP C;  4LTY A;  3N5U A;  2P6B A;  3K7W C;  2BDX A;  2Z72 A;  1M63 A;  2JOG A;  3QFO A;  4H2F A;  4IL1 A;  1IT6 A;  4O4K A;  4ZX2 A;  1MF8 A;  2WDF A;  1G5B A;  3QFN A;  5EQV A;  1JK7 A;  5J28 A;  1HO5 A;  4I5N C;  3IVD A;  1WAO 1;  4KBP A;  4O5G A;  1OI8 A;  4FBK A;  3C9F A;  2WDD A;  3JYF A;  2ZOA A;  2DXL A;  2YEQ A;  3EGG A;  3E7A A;  3QG5 C;  1QHW A;  1HP1 A;  4O43 A;  2A22 A;  1XM7 A;  3H69 A;  1S3L A;  2Q8U A;  4XPN A;  2R17 A;  2IE3 C;  4H2G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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