1NNWA

Hypothetical protein from pyrococcus furiosus pfu-1218608
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
251
structure length
251
Chain Sequence
VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPPGKEHKATFALVDVDTLKPKFIEVEYDKKIIEERIRAEGLPEEIIKILYHGGRP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
source organism Pyrococcus furiosus
publication title Southeast Collaboratory for Structural Genomics: hypothetical protein from Pyrococcus furiosus Pfu-1218608
rcsb
molecule keywords hypothetical protein
total genus 79
structure length 251
sequence length 251
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-01-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 1nnwA00
2IE4C 3H63A 4M0VA 2HYPA 3RQZA 1WAO1 2AHDA 3H69A 2A22A 4ZX2A 5IOHA 3EGHA 3E7BA 1MF8A 2R17A 4H2IA 3RL4A 4TUIA 4ORCA 1W24A 5GTUA 3EGGA 4UWQA 2O8AA 4Q7FA 4F0ZA 2WDEA 4IYPC 2Z1AA 3C9FA 4XPNA 3N5UA 4MOVA 3H67A 1S3MA 2HY1A 3H61A 4OR9A 1TCOA 2NYLC 1AUIA 4H2FA 4DT2A 3H60A 1FJMA 3QFOA 4V0WA 3AUZA 2BDXA 3CK2A 4UT2A 2QFRA 5DNYA 1M63A 3AV0A 3E7AA 3GVEA 3IVEA 2JOGA 3THOB 4FCXA 4J6OA 2CV9A 3T1IA 4H2GA 3IB8A 4JA9A 3DW8C 4UT3B 1U32A 4HD0A 1QFCA 1XM7A 4LU9A 2USHA 4I5NC 4H1YP 3K7WC 3H68A 2HYOA 4I5LC 4H2BA 2QFPA 2BQ8X 4KKZA 4LACC 3LL8A 1OIDA 1S3NA 4WWLA 2WDCA 1HP1A 5F3WA 3QFKA 3QFNA 1S3LA 1HPUA 1V73A 2NYMC 5C1VA 1T71A 4V0XA 1S8EA 4O5GA 4YKEA 3K7VC 3DSCA 2KKNA 3RL5A 5JPFA 3TGHA 4ORBA 4FBKA 2Z72A 5HPEA 3JYFA 4FBWA 2XMOA 2O8GA 3H66A 2Q8UA 4UT3A 3DSDA 1UF3A 5JJTA 3V4YA 5INBA 1UTEA 3THNA 3HVQA 3IB7A 2NXFA 1OI8A 1XZWA 2ZBMA 3FGAC 4NZVA 3KBPA 4KBPA 3P71C 1Z2XA 3RL3A 2IAEC 3QFMA 1IT6A 3C5WC 4V0VA 4DHLA 2Z06A 4G9JA 1WARA 1JK7A 1II7A 1G5BA 3PSNA 3ZTVA 5JPEA 2IE3C 1HO5A 1T70A 4IL1A 5EQVA 5J28A 3ICFA 4ORAA 1NNWA 4MOYA 4O24A 2QJCA 1USHA 4H1SA 1QHWA 1OIEA 1SU1A 1S70A 3H64A 2WDDA 4FBQA 4LTYA 4O4KA 2DFJA 2YVTA 4MP0A 3ZU0A 2GJUA 2P6BA 4O43A 3PSOA 4DSYA 5B8IA 1KBPA 1S95A 3IVDA 3H62B 4JA7A 4TUGA 4B2OA 2BCDA 3QG5C 1Z2WA 4ZVZA 2WDFA 2NPPC
chains in the Genus database with same CATH superfamily
2IE4C 3H63A 4M0VA 2HYPA 3RQZA 1WAO1 2AHDA 3H69A 2A22A 4ZX2A 5IOHA 3EGHA 3E7BA 1MF8A 2R17A 4H2IA 3RL4A 4TUIA 4ORCA 1W24A 5GTUA 3EGGA 4UWQA 2O8AA 4Q7FA 4F0ZA 2WDEA 4IYPC 2Z1AA 3C9FA 4XPNA 3N5UA 4MOVA 3H67A 1S3MA 2HY1A 3H61A 4OR9A 1TCOA 2NYLC 1AUIA 4H2FA 4DT2A 3H60A 1FJMA 3QFOA 4V0WA 3AUZA 2BDXA 3CK2A 4UT2A 3E0JA 2QFRA 5DNYA 1M63A 3AV0A 3E7AA 3GVEA 3IVEA 2JOGA 3THOB 4FCXA 2ZOAA 4J6OA 2CV9A 3T1IA 4H2GA 3IB8A 4JA9A 3DW8C 4UT3B 1U32A 4HD0A 1QFCA 2DXLA 1XM7A 4LU9A 2USHA 4I5NC 4H1YP 3K7WC 3H68A 2HYOA 4I5LC 4H2BA 2QFPA 2BQ8X 4KKZA 4LACC 3LL8A 1OIDA 1S3NA 4WWLA 2WDCA 1HP1A 5F3WA 3QFKA 3QFNA 1S3LA 1HPUA 1V73A 2NYMC 5C1VA 1T71A 2YEQA 4V0XA 1S8EA 4O5GA 4YKEA 3K7VC 3DSCA 2KKNA 3RL5A 5JPFA 3TGHA 4ORBA 4FBKA 2Z72A 5HPEA 3JYFA 4FBWA 2XMOA 2O8GA 3FLOA 3H66A 2Q8UA 4UT3A 3DSDA 1UF3A 5JJTA 3V4YA 5INBA 1UTEA 3THNA 3HVQA 3IB7A 2NXFA 1OI8A 1XZWA 2ZBMA 3FGAC 2DXNA 4NZVA 3KBPA 4KBPA 3P71C 1Z2XA 3RL3A 2IAEC 3QFMA 1IT6A 3C5WC 4V0VA 4DHLA 2Z06A 4G9JA 1WARA 1JK7A 1II7A 1G5BA 3PSNA 3ZTVA 5JPEA 2IE3C 1HO5A 1T70A 4IL1A 5EQVA 5J28A 3ICFA 4ORAA 1NNWA 4MOYA 4O24A 2QJCA 1USHA 4H1SA 1QHWA 1OIEA 1SU1A 1S70A 3H64A 2WDDA 4FBQA 4LTYA 4O4KA 2DFJA 2YVTA 4MP0A 3ZU0A 2GJUA 2P6BA 4O43A 3PSOA 4DSYA 5B8IA 1KBPA 1S95A 3IVDA 3H62B 4JA7A 4TUGA 4B2OA 2BCDA 2ZO9B 3QG5C 1Z2WA 4ZVZA 3D03A 2WDFA 2NPPC
chains in the Genus database with same CATH topology
2IE4C 3H63A 4M0VA 2HYPA 3RQZA 1WAO1 2AHDA 3H69A 2A22A 4ZX2A 5IOHA 3EGHA 3E7BA 1MF8A 2R17A 4H2IA 3RL4A 4TUIA 4ORCA 1W24A 5GTUA 3EGGA 4UWQA 2O8AA 4Q7FA 4F0ZA 2WDEA 4IYPC 2Z1AA 3C9FA 4XPNA 3N5UA 4MOVA 3H67A 1S3MA 2HY1A 3H61A 4OR9A 1TCOA 2NYLC 1AUIA 4H2FA 4DT2A 3H60A 1FJMA 3QFOA 4V0WA 3AUZA 2BDXA 3CK2A 4UT2A 3E0JA 2QFRA 5DNYA 1M63A 3AV0A 3E7AA 3GVEA 3IVEA 2JOGA 3THOB 4FCXA 2ZOAA 4J6OA 2CV9A 3T1IA 4H2GA 3IB8A 4JA9A 3DW8C 4UT3B 1U32A 4HD0A 1QFCA 2DXLA 1XM7A 4LU9A 2USHA 4I5NC 4H1YP 3K7WC 3H68A 2HYOA 4I5LC 4H2BA 2QFPA 2BQ8X 4KKZA 4LACC 3LL8A 1OIDA 1S3NA 4WWLA 2WDCA 1HP1A 5F3WA 3QFKA 3QFNA 1S3LA 1HPUA 1V73A 2NYMC 5C1VA 1T71A 2YEQA 4V0XA 1S8EA 4O5GA 4YKEA 3K7VC 3DSCA 2KKNA 3RL5A 5JPFA 3TGHA 4ORBA 4FBKA 2Z72A 5HPEA 3JYFA 4FBWA 2XMOA 2O8GA 3FLOA 3H66A 2Q8UA 4UT3A 3DSDA 1UF3A 5JJTA 3V4YA 5INBA 1UTEA 3THNA 3HVQA 3IB7A 2NXFA 1OI8A 1XZWA 2ZBMA 3FGAC 2DXNA 4NZVA 3KBPA 4KBPA 3P71C 1Z2XA 3RL3A 2IAEC 3QFMA 1IT6A 3C5WC 4V0VA 4DHLA 2Z06A 4G9JA 1WARA 1JK7A 1II7A 1G5BA 3PSNA 3ZTVA 5JPEA 2IE3C 1HO5A 1T70A 4IL1A 5EQVA 5J28A 3ICFA 4ORAA 1NNWA 4MOYA 4O24A 2QJCA 1USHA 4H1SA 1QHWA 1OIEA 1SU1A 1S70A 3H64A 2WDDA 4FBQA 4LTYA 4O4KA 2DFJA 2YVTA 4MP0A 3ZU0A 2GJUA 2P6BA 4O43A 3PSOA 4DSYA 5B8IA 1KBPA 1S95A 3IVDA 3H62B 4JA7A 4TUGA 4B2OA 2BCDA 2ZO9B 3QG5C 1Z2WA 4ZVZA 3D03A 2WDFA 2NPPC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2IE4 C;  3H63 A;  4M0V A;  2HYP A;  3RQZ A;  1WAO 1;  2AHD A;  3H69 A;  2A22 A;  4ZX2 A;  5IOH A;  3EGH A;  3E7B A;  1MF8 A;  2R17 A;  4H2I A;  3RL4 A;  4TUI A;  4ORC A;  1W24 A;  5GTU A;  3EGG A;  4UWQ A;  2O8A A;  4Q7F A;  4F0Z A;  2WDE A;  4IYP C;  2Z1A A;  3C9F A;  4XPN A;  3N5U A;  4MOV A;  3H67 A;  1S3M A;  2HY1 A;  3H61 A;  4OR9 A;  1TCO A;  2NYL C;  1AUI A;  4H2F A;  4DT2 A;  3H60 A;  1FJM A;  3QFO A;  4V0W A;  3AUZ A;  2BDX A;  3CK2 A;  4UT2 A;  2QFR A;  5DNY A;  1M63 A;  3AV0 A;  3E7A A;  3GVE A;  3IVE A;  2JOG A;  3THO B;  4FCX A;  4J6O A;  2CV9 A;  3T1I A;  4H2G A;  3IB8 A;  4JA9 A;  3DW8 C;  4UT3 B;  1U32 A;  4HD0 A;  1QFC A;  1XM7 A;  4LU9 A;  2USH A;  4I5N C;  4H1Y P;  3K7W C;  3H68 A;  2HYO A;  4I5L C;  4H2B A;  2QFP A;  2BQ8 X;  4KKZ A;  4LAC C;  3LL8 A;  1OID A;  1S3N A;  4WWL A;  2WDC A;  1HP1 A;  5F3W A;  3QFK A;  3QFN A;  1S3L A;  1HPU A;  1V73 A;  2NYM C;  5C1V A;  1T71 A;  4V0X A;  1S8E A;  4O5G A;  4YKE A;  3K7V C;  3DSC A;  2KKN A;  3RL5 A;  5JPF A;  3TGH A;  4ORB A;  4FBK A;  2Z72 A;  5HPE A;  3JYF A;  4FBW A;  2XMO A;  2O8G A;  3H66 A;  2Q8U A;  4UT3 A;  3DSD A;  1UF3 A;  5JJT A;  3V4Y A;  5INB A;  1UTE A;  3THN A;  3HVQ A;  3IB7 A;  2NXF A;  1OI8 A;  1XZW A;  2ZBM A;  3FGA C;  4NZV A;  3KBP A;  4KBP A;  3P71 C;  1Z2X A;  3RL3 A;  2IAE C;  3QFM A;  1IT6 A;  3C5W C;  4V0V A;  4DHL A;  2Z06 A;  4G9J A;  1WAR A;  1JK7 A;  1II7 A;  1G5B A;  3PSN A;  3ZTV A;  5JPE A;  2IE3 C;  1HO5 A;  1T70 A;  4IL1 A;  5EQV A;  5J28 A;  3ICF A;  4ORA A;  1NNW A;  4MOY A;  4O24 A;  2QJC A;  1USH A;  4H1S A;  1QHW A;  1OIE A;  1SU1 A;  1S70 A;  3H64 A;  2WDD A;  4FBQ A;  4LTY A;  4O4K A;  2DFJ A;  2YVT A;  4MP0 A;  3ZU0 A;  2GJU A;  2P6B A;  4O43 A;  3PSO A;  4DSY A;  5B8I A;  1KBP A;  1S95 A;  3IVD A;  3H62 B;  4JA7 A;  4TUG A;  4B2O A;  2BCD A;  3QG5 C;  1Z2W A;  4ZVZ A;  2WDF A;  2NPP C; 
#chains in the Genus database with same CATH topology
 2IE4 C;  3H63 A;  4M0V A;  2HYP A;  3RQZ A;  1WAO 1;  2AHD A;  3H69 A;  2A22 A;  4ZX2 A;  5IOH A;  3EGH A;  3E7B A;  1MF8 A;  2R17 A;  4H2I A;  3RL4 A;  4TUI A;  4ORC A;  1W24 A;  5GTU A;  3EGG A;  4UWQ A;  2O8A A;  4Q7F A;  4F0Z A;  2WDE A;  4IYP C;  2Z1A A;  3C9F A;  4XPN A;  3N5U A;  4MOV A;  3H67 A;  1S3M A;  2HY1 A;  3H61 A;  4OR9 A;  1TCO A;  2NYL C;  1AUI A;  4H2F A;  4DT2 A;  3H60 A;  1FJM A;  3QFO A;  4V0W A;  3AUZ A;  2BDX A;  3CK2 A;  4UT2 A;  3E0J A;  2QFR A;  5DNY A;  1M63 A;  3AV0 A;  3E7A A;  3GVE A;  3IVE A;  2JOG A;  3THO B;  4FCX A;  2ZOA A;  4J6O A;  2CV9 A;  3T1I A;  4H2G A;  3IB8 A;  4JA9 A;  3DW8 C;  4UT3 B;  1U32 A;  4HD0 A;  1QFC A;  2DXL A;  1XM7 A;  4LU9 A;  2USH A;  4I5N C;  4H1Y P;  3K7W C;  3H68 A;  2HYO A;  4I5L C;  4H2B A;  2QFP A;  2BQ8 X;  4KKZ A;  4LAC C;  3LL8 A;  1OID A;  1S3N A;  4WWL A;  2WDC A;  1HP1 A;  5F3W A;  3QFK A;  3QFN A;  1S3L A;  1HPU A;  1V73 A;  2NYM C;  5C1V A;  1T71 A;  2YEQ A;  4V0X A;  1S8E A;  4O5G A;  4YKE A;  3K7V C;  3DSC A;  2KKN A;  3RL5 A;  5JPF A;  3TGH A;  4ORB A;  4FBK A;  2Z72 A;  5HPE A;  3JYF A;  4FBW A;  2XMO A;  2O8G A;  3FLO A;  3H66 A;  2Q8U A;  4UT3 A;  3DSD A;  1UF3 A;  5JJT A;  3V4Y A;  5INB A;  1UTE A;  3THN A;  3HVQ A;  3IB7 A;  2NXF A;  1OI8 A;  1XZW A;  2ZBM A;  3FGA C;  2DXN A;  4NZV A;  3KBP A;  4KBP A;  3P71 C;  1Z2X A;  3RL3 A;  2IAE C;  3QFM A;  1IT6 A;  3C5W C;  4V0V A;  4DHL A;  2Z06 A;  4G9J A;  1WAR A;  1JK7 A;  1II7 A;  1G5B A;  3PSN A;  3ZTV A;  5JPE A;  2IE3 C;  1HO5 A;  1T70 A;  4IL1 A;  5EQV A;  5J28 A;  3ICF A;  4ORA A;  1NNW A;  4MOY A;  4O24 A;  2QJC A;  1USH A;  4H1S A;  1QHW A;  1OIE A;  1SU1 A;  1S70 A;  3H64 A;  2WDD A;  4FBQ A;  4LTY A;  4O4K A;  2DFJ A;  2YVT A;  4MP0 A;  3ZU0 A;  2GJU A;  2P6B A;  4O43 A;  3PSO A;  4DSY A;  5B8I A;  1KBP A;  1S95 A;  3IVD A;  3H62 B;  4JA7 A;  4TUG A;  4B2O A;  2BCD A;  2ZO9 B;  3QG5 C;  1Z2W A;  4ZVZ A;  3D03 A;  2WDF A;  2NPP C; 
#chains in the Genus database with same CATH homology
 2IE4 C;  3H63 A;  4M0V A;  2HYP A;  3RQZ A;  1WAO 1;  2AHD A;  3H69 A;  2A22 A;  4ZX2 A;  5IOH A;  3EGH A;  3E7B A;  1MF8 A;  2R17 A;  4H2I A;  3RL4 A;  4TUI A;  4ORC A;  1W24 A;  5GTU A;  3EGG A;  4UWQ A;  2O8A A;  4Q7F A;  4F0Z A;  2WDE A;  4IYP C;  2Z1A A;  3C9F A;  4XPN A;  3N5U A;  4MOV A;  3H67 A;  1S3M A;  2HY1 A;  3H61 A;  4OR9 A;  1TCO A;  2NYL C;  1AUI A;  4H2F A;  4DT2 A;  3H60 A;  1FJM A;  3QFO A;  4V0W A;  3AUZ A;  2BDX A;  3CK2 A;  4UT2 A;  3E0J A;  2QFR A;  5DNY A;  1M63 A;  3AV0 A;  3E7A A;  3GVE A;  3IVE A;  2JOG A;  3THO B;  4FCX A;  2ZOA A;  4J6O A;  2CV9 A;  3T1I A;  4H2G A;  3IB8 A;  4JA9 A;  3DW8 C;  4UT3 B;  1U32 A;  4HD0 A;  1QFC A;  2DXL A;  1XM7 A;  4LU9 A;  2USH A;  4I5N C;  4H1Y P;  3K7W C;  3H68 A;  2HYO A;  4I5L C;  4H2B A;  2QFP A;  2BQ8 X;  4KKZ A;  4LAC C;  3LL8 A;  1OID A;  1S3N A;  4WWL A;  2WDC A;  1HP1 A;  5F3W A;  3QFK A;  3QFN A;  1S3L A;  1HPU A;  1V73 A;  2NYM C;  5C1V A;  1T71 A;  2YEQ A;  4V0X A;  1S8E A;  4O5G A;  4YKE A;  3K7V C;  3DSC A;  2KKN A;  3RL5 A;  5JPF A;  3TGH A;  4ORB A;  4FBK A;  2Z72 A;  5HPE A;  3JYF A;  4FBW A;  2XMO A;  2O8G A;  3FLO A;  3H66 A;  2Q8U A;  4UT3 A;  3DSD A;  1UF3 A;  5JJT A;  3V4Y A;  5INB A;  1UTE A;  3THN A;  3HVQ A;  3IB7 A;  2NXF A;  1OI8 A;  1XZW A;  2ZBM A;  3FGA C;  2DXN A;  4NZV A;  3KBP A;  4KBP A;  3P71 C;  1Z2X A;  3RL3 A;  2IAE C;  3QFM A;  1IT6 A;  3C5W C;  4V0V A;  4DHL A;  2Z06 A;  4G9J A;  1WAR A;  1JK7 A;  1II7 A;  1G5B A;  3PSN A;  3ZTV A;  5JPE A;  2IE3 C;  1HO5 A;  1T70 A;  4IL1 A;  5EQV A;  5J28 A;  3ICF A;  4ORA A;  1NNW A;  4MOY A;  4O24 A;  2QJC A;  1USH A;  4H1S A;  1QHW A;  1OIE A;  1SU1 A;  1S70 A;  3H64 A;  2WDD A;  4FBQ A;  4LTY A;  4O4K A;  2DFJ A;  2YVT A;  4MP0 A;  3ZU0 A;  2GJU A;  2P6B A;  4O43 A;  3PSO A;  4DSY A;  5B8I A;  1KBP A;  1S95 A;  3IVD A;  3H62 B;  4JA7 A;  4TUG A;  4B2O A;  2BCD A;  2ZO9 B;  3QG5 C;  1Z2W A;  4ZVZ A;  3D03 A;  2WDF A;  2NPP C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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