1NNWA

Hypothetical protein from pyrococcus furiosus pfu-1218608
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
251
structure length
251
Chain Sequence
b'VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPKEVIEVIKDLTKKENVKIIRGKYDQIIAMSDPHATDPGYIDKLELPGHVKKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAMTRYGRVVCPGSVGFPPGKEHKATFALVDVDTLKPKFIEVEYDKKIIEERIRAEGLPEEIIKILYHGGRP'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Southeast Collaboratory for Structural Genomics: hypothetical protein from Pyrococcus furiosus Pfu-1218608
rcsb
molecule keywords hypothetical protein
source organism Pyrococcus furiosus
molecule tags Structural genomics, unknown function
total genus 79
structure length 251
sequence length 251
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-01-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 1nnwA00
1V73A 4KBPA 1S3NA 1WARA 2QJCA 2XMOA 3LL8A 4H2FA 3QFOA 4DT2A 5IOHA 3PSOA 4MOYA 1S70A 1T70A 4I5LC 4MP0A 3IVEA 4ORBA 1OIEA 1FJMA 3QG5C 3H66A 2WDFA 3THOB 1WAO1 2BCDA 4UT3A 1QHWA 1UTEA 1S3MA 3FGAC 1OI8A 3ICFA 5B8IA 5F3WA 4KKZA 2Q8UA 4ZVZA 3THNA 5J28A 3RL4A 3E7BA 4G9JA 3EGGA 4ORCA 3TGHA 4LACC 4YKEA 1W24A 2IE4C 3K7WC 4B2OA 5JPFA 4I5NC 4FBKA 3H68A 2BQ8X 1S95A 1OIDA 2O8AA 5JJTA 1U32A 3QFNA 4O4KA 1T71A 3KBPA 3V4YA 4TUGA 1NNWA 2NYLC 3RQZA 4UT3B 2IAEC 4M0VA 4FBQA 2R17A 4HD0A 4H1YP 1SU1A 1HO5A 3DSCA 2P6BA 2HYOA 1KBPA 1Z2XA 1AUIA 3C5WC 3H63A 3H67A 3P71C 4V0VA 1QFCA 3GVEA 3T1IA 3RL3A 1MF8A 4OR9A 4XPNA 4DHLA 4O5GA 4O43A 1S3LA 1II7A 4WWLA 5INBA 3JYFA 3H61A 3H69A 4H1SA 2WDDA 4IL1A 2QFRA 4Q7FA 2NXFA 2DFJA 3C9FA 4UT2A 2HY1A 3K7VC 4F0ZA 4DSYA 4FBWA 2WDCA 4IYPC 4J6OA 4JA9A 3DSDA 2IE3C 5C1VA 3DW8C 2KKNA 1Z2WA 1XZWA 3PSNA 5HPEA 2JOGA 2GJUA 1HP1A 2HYPA 3IB8A 4UWQA 2A22A 3QFKA 4H2BA 3ZTVA 3AUZA 4ORAA 5JPEA 2NPPC 4V0WA 2CV9A 3HVQA 4JA7A 1TCOA 2AHDA 2Z1AA 3EGHA 1JK7A 4V0XA 4ZX2A 2WDEA 2O8GA 2BDXA 3AV0A 2USHA 4H2IA 2Z06A 3CK2A 3QFMA 3H62B 1USHA 3IB7A 3ZU0A 4FCXA 2Z72A 4H2GA 1IT6A 2ZBMA 1G5BA 4NZVA 3H60A 1S8EA 2QFPA 5EQVA 3IVDA 2YVTA 3N5UA 3RL5A 1HPUA 4LTYA 3E7AA 4TUIA 2NYMC 3H64A 4O24A 5DNYA 1XM7A 1UF3A 4MOVA 5GTUA 4LU9A 1M63A
chains in the Genus database with same CATH superfamily
1V73A 4KBPA 1S3NA 1WARA 2QJCA 2XMOA 2YEQA 3LL8A 3QFOA 4H2FA 4DT2A 5IOHA 3PSOA 4MOYA 1S70A 1T70A 4I5LC 4MP0A 3IVEA 4ORBA 1OIEA 1FJMA 3QG5C 3H66A 2WDFA 3THOB 1WAO1 2BCDA 4UT3A 1QHWA 1UTEA 1S3MA 3FGAC 1OI8A 3ICFA 5B8IA 5F3WA 4KKZA 2DXLA 2Q8UA 4ZVZA 3THNA 5J28A 3RL4A 3E7BA 4G9JA 3EGGA 4ORCA 3TGHA 4LACC 4YKEA 1W24A 2IE4C 3K7WC 4B2OA 5JPFA 4I5NC 4FBKA 3H68A 2BQ8X 1S95A 1OIDA 2O8AA 5JJTA 1U32A 3QFNA 4O4KA 1T71A 3KBPA 3V4YA 4TUGA 1NNWA 2NYLC 3RQZA 4UT3B 2IAEC 4M0VA 4FBQA 2R17A 4HD0A 4H1YP 1SU1A 3E0JA 1HO5A 3DSCA 2P6BA 2HYOA 1KBPA 1Z2XA 1AUIA 3C5WC 3H63A 3H67A 3P71C 4V0VA 1QFCA 3GVEA 3T1IA 3RL3A 1MF8A 4OR9A 4XPNA 4DHLA 2ZOAA 4O43A 4O5GA 1S3LA 1II7A 4WWLA 5INBA 3JYFA 3H61A 3H69A 4H1SA 2WDDA 4IL1A 2QFRA 4Q7FA 2NXFA 2DFJA 3C9FA 4UT2A 2HY1A 3K7VC 4F0ZA 4DSYA 4FBWA 2WDCA 4IYPC 4J6OA 4JA9A 3DSDA 2IE3C 5C1VA 3DW8C 2KKNA 1Z2WA 1XZWA 3PSNA 5HPEA 2JOGA 2GJUA 1HP1A 3D03A 2HYPA 3IB8A 4UWQA 2A22A 2DXNA 3QFKA 4H2BA 3ZTVA 3AUZA 4ORAA 5JPEA 2NPPC 4V0WA 2CV9A 3HVQA 4JA7A 1TCOA 2AHDA 2Z1AA 3EGHA 1JK7A 4V0XA 4ZX2A 2WDEA 2O8GA 2BDXA 3AV0A 2USHA 4H2IA 2Z06A 3CK2A 3QFMA 3H62B 1USHA 3IB7A 3FLOA 3ZU0A 4FCXA 2Z72A 4H2GA 1IT6A 2ZBMA 1G5BA 4NZVA 3H60A 1S8EA 2QFPA 5EQVA 3IVDA 2YVTA 3N5UA 3RL5A 1HPUA 4LTYA 3E7AA 4TUIA 2NYMC 3H64A 4O24A 2ZO9B 5DNYA 1XM7A 1UF3A 4MOVA 5GTUA 4LU9A 1M63A
chains in the Genus database with same CATH topology
1V73A 4KBPA 1S3NA 1WARA 2QJCA 2XMOA 2YEQA 3LL8A 3QFOA 4H2FA 4DT2A 5IOHA 3PSOA 4MOYA 1S70A 1T70A 4I5LC 4MP0A 3IVEA 4ORBA 1OIEA 1FJMA 3QG5C 3H66A 2WDFA 3THOB 1WAO1 2BCDA 4UT3A 1QHWA 1UTEA 1S3MA 3FGAC 1OI8A 3ICFA 5B8IA 5F3WA 4KKZA 2DXLA 2Q8UA 4ZVZA 3THNA 5J28A 3RL4A 3E7BA 4G9JA 3EGGA 4ORCA 3TGHA 4LACC 4YKEA 1W24A 2IE4C 3K7WC 4B2OA 5JPFA 4I5NC 4FBKA 3H68A 2BQ8X 1S95A 1OIDA 2O8AA 5JJTA 1U32A 3QFNA 4O4KA 1T71A 3KBPA 3V4YA 4TUGA 1NNWA 2NYLC 3RQZA 4UT3B 2IAEC 4M0VA 4FBQA 2R17A 4HD0A 4H1YP 1SU1A 3E0JA 1HO5A 3DSCA 2P6BA 2HYOA 1KBPA 1Z2XA 1AUIA 3C5WC 3H63A 3H67A 3P71C 4V0VA 1QFCA 3GVEA 3T1IA 3RL3A 1MF8A 4OR9A 4XPNA 4DHLA 2ZOAA 4O43A 4O5GA 1S3LA 1II7A 4WWLA 5INBA 3JYFA 3H61A 3H69A 4H1SA 2WDDA 4IL1A 2QFRA 4Q7FA 2NXFA 2DFJA 3C9FA 4UT2A 2HY1A 3K7VC 4F0ZA 4DSYA 4FBWA 2WDCA 4IYPC 4J6OA 4JA9A 3DSDA 2IE3C 5C1VA 3DW8C 2KKNA 1Z2WA 1XZWA 3PSNA 5HPEA 2JOGA 2GJUA 1HP1A 3D03A 2HYPA 3IB8A 4UWQA 2A22A 2DXNA 3QFKA 4H2BA 3ZTVA 3AUZA 4ORAA 5JPEA 2NPPC 4V0WA 2CV9A 3HVQA 4JA7A 1TCOA 2AHDA 2Z1AA 3EGHA 1JK7A 4V0XA 4ZX2A 2WDEA 2O8GA 2BDXA 3AV0A 2USHA 4H2IA 2Z06A 3CK2A 3QFMA 3H62B 1USHA 3IB7A 3FLOA 3ZU0A 4FCXA 2Z72A 4H2GA 1IT6A 2ZBMA 1G5BA 4NZVA 3H60A 1S8EA 2QFPA 5EQVA 3IVDA 2YVTA 3N5UA 3RL5A 1HPUA 4LTYA 3E7AA 4TUIA 2NYMC 3H64A 4O24A 2ZO9B 5DNYA 1XM7A 1UF3A 4MOVA 5GTUA 4LU9A 1M63A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1V73 A;  4KBP A;  1S3N A;  1WAR A;  2QJC A;  2XMO A;  3LL8 A;  4H2F A;  3QFO A;  4DT2 A;  5IOH A;  3PSO A;  4MOY A;  1S70 A;  1T70 A;  4I5L C;  4MP0 A;  3IVE A;  4ORB A;  1OIE A;  1FJM A;  3QG5 C;  3H66 A;  2WDF A;  3THO B;  1WAO 1;  2BCD A;  4UT3 A;  1QHW A;  1UTE A;  1S3M A;  3FGA C;  1OI8 A;  3ICF A;  5B8I A;  5F3W A;  4KKZ A;  2Q8U A;  4ZVZ A;  3THN A;  5J28 A;  3RL4 A;  3E7B A;  4G9J A;  3EGG A;  4ORC A;  3TGH A;  4LAC C;  4YKE A;  1W24 A;  2IE4 C;  3K7W C;  4B2O A;  5JPF A;  4I5N C;  4FBK A;  3H68 A;  2BQ8 X;  1S95 A;  1OID A;  2O8A A;  5JJT A;  1U32 A;  3QFN A;  4O4K A;  1T71 A;  3KBP A;  3V4Y A;  4TUG A;  1NNW A;  2NYL C;  3RQZ A;  4UT3 B;  2IAE C;  4M0V A;  4FBQ A;  2R17 A;  4HD0 A;  4H1Y P;  1SU1 A;  1HO5 A;  3DSC A;  2P6B A;  2HYO A;  1KBP A;  1Z2X A;  1AUI A;  3C5W C;  3H63 A;  3H67 A;  3P71 C;  4V0V A;  1QFC A;  3GVE A;  3T1I A;  3RL3 A;  1MF8 A;  4OR9 A;  4XPN A;  4DHL A;  4O5G A;  4O43 A;  1S3L A;  1II7 A;  4WWL A;  5INB A;  3JYF A;  3H61 A;  3H69 A;  4H1S A;  2WDD A;  4IL1 A;  2QFR A;  4Q7F A;  2NXF A;  2DFJ A;  3C9F A;  4UT2 A;  2HY1 A;  3K7V C;  4F0Z A;  4DSY A;  4FBW A;  2WDC A;  4IYP C;  4J6O A;  4JA9 A;  3DSD A;  2IE3 C;  5C1V A;  3DW8 C;  2KKN A;  1Z2W A;  1XZW A;  3PSN A;  5HPE A;  2JOG A;  2GJU A;  1HP1 A;  2HYP A;  3IB8 A;  4UWQ A;  2A22 A;  3QFK A;  4H2B A;  3ZTV A;  3AUZ A;  4ORA A;  5JPE A;  2NPP C;  4V0W A;  2CV9 A;  3HVQ A;  4JA7 A;  1TCO A;  2AHD A;  2Z1A A;  3EGH A;  1JK7 A;  4V0X A;  4ZX2 A;  2WDE A;  2O8G A;  2BDX A;  3AV0 A;  2USH A;  4H2I A;  2Z06 A;  3CK2 A;  3QFM A;  3H62 B;  1USH A;  3IB7 A;  3ZU0 A;  4FCX A;  2Z72 A;  4H2G A;  1IT6 A;  2ZBM A;  1G5B A;  4NZV A;  3H60 A;  1S8E A;  2QFP A;  5EQV A;  3IVD A;  2YVT A;  3N5U A;  3RL5 A;  1HPU A;  4LTY A;  3E7A A;  4TUI A;  2NYM C;  3H64 A;  4O24 A;  5DNY A;  1XM7 A;  1UF3 A;  4MOV A;  5GTU A;  4LU9 A;  1M63 A; 
#chains in the Genus database with same CATH topology
 1V73 A;  4KBP A;  1S3N A;  1WAR A;  2QJC A;  2XMO A;  2YEQ A;  3LL8 A;  3QFO A;  4H2F A;  4DT2 A;  5IOH A;  3PSO A;  4MOY A;  1S70 A;  1T70 A;  4I5L C;  4MP0 A;  3IVE A;  4ORB A;  1OIE A;  1FJM A;  3QG5 C;  3H66 A;  2WDF A;  3THO B;  1WAO 1;  2BCD A;  4UT3 A;  1QHW A;  1UTE A;  1S3M A;  3FGA C;  1OI8 A;  3ICF A;  5B8I A;  5F3W A;  4KKZ A;  2DXL A;  2Q8U A;  4ZVZ A;  3THN A;  5J28 A;  3RL4 A;  3E7B A;  4G9J A;  3EGG A;  4ORC A;  3TGH A;  4LAC C;  4YKE A;  1W24 A;  2IE4 C;  3K7W C;  4B2O A;  5JPF A;  4I5N C;  4FBK A;  3H68 A;  2BQ8 X;  1S95 A;  1OID A;  2O8A A;  5JJT A;  1U32 A;  3QFN A;  4O4K A;  1T71 A;  3KBP A;  3V4Y A;  4TUG A;  1NNW A;  2NYL C;  3RQZ A;  4UT3 B;  2IAE C;  4M0V A;  4FBQ A;  2R17 A;  4HD0 A;  4H1Y P;  1SU1 A;  3E0J A;  1HO5 A;  3DSC A;  2P6B A;  2HYO A;  1KBP A;  1Z2X A;  1AUI A;  3C5W C;  3H63 A;  3H67 A;  3P71 C;  4V0V A;  1QFC A;  3GVE A;  3T1I A;  3RL3 A;  1MF8 A;  4OR9 A;  4XPN A;  4DHL A;  2ZOA A;  4O43 A;  4O5G A;  1S3L A;  1II7 A;  4WWL A;  5INB A;  3JYF A;  3H61 A;  3H69 A;  4H1S A;  2WDD A;  4IL1 A;  2QFR A;  4Q7F A;  2NXF A;  2DFJ A;  3C9F A;  4UT2 A;  2HY1 A;  3K7V C;  4F0Z A;  4DSY A;  4FBW A;  2WDC A;  4IYP C;  4J6O A;  4JA9 A;  3DSD A;  2IE3 C;  5C1V A;  3DW8 C;  2KKN A;  1Z2W A;  1XZW A;  3PSN A;  5HPE A;  2JOG A;  2GJU A;  1HP1 A;  3D03 A;  2HYP A;  3IB8 A;  4UWQ A;  2A22 A;  2DXN A;  3QFK A;  4H2B A;  3ZTV A;  3AUZ A;  4ORA A;  5JPE A;  2NPP C;  4V0W A;  2CV9 A;  3HVQ A;  4JA7 A;  1TCO A;  2AHD A;  2Z1A A;  3EGH A;  1JK7 A;  4V0X A;  4ZX2 A;  2WDE A;  2O8G A;  2BDX A;  3AV0 A;  2USH A;  4H2I A;  2Z06 A;  3CK2 A;  3QFM A;  3H62 B;  1USH A;  3IB7 A;  3FLO A;  3ZU0 A;  4FCX A;  2Z72 A;  4H2G A;  1IT6 A;  2ZBM A;  1G5B A;  4NZV A;  3H60 A;  1S8E A;  2QFP A;  5EQV A;  3IVD A;  2YVT A;  3N5U A;  3RL5 A;  1HPU A;  4LTY A;  3E7A A;  4TUI A;  2NYM C;  3H64 A;  4O24 A;  2ZO9 B;  5DNY A;  1XM7 A;  1UF3 A;  4MOV A;  5GTU A;  4LU9 A;  1M63 A; 
#chains in the Genus database with same CATH homology
 1V73 A;  4KBP A;  1S3N A;  1WAR A;  2QJC A;  2XMO A;  2YEQ A;  3LL8 A;  3QFO A;  4H2F A;  4DT2 A;  5IOH A;  3PSO A;  4MOY A;  1S70 A;  1T70 A;  4I5L C;  4MP0 A;  3IVE A;  4ORB A;  1OIE A;  1FJM A;  3QG5 C;  3H66 A;  2WDF A;  3THO B;  1WAO 1;  2BCD A;  4UT3 A;  1QHW A;  1UTE A;  1S3M A;  3FGA C;  1OI8 A;  3ICF A;  5B8I A;  5F3W A;  4KKZ A;  2DXL A;  2Q8U A;  4ZVZ A;  3THN A;  5J28 A;  3RL4 A;  3E7B A;  4G9J A;  3EGG A;  4ORC A;  3TGH A;  4LAC C;  4YKE A;  1W24 A;  2IE4 C;  3K7W C;  4B2O A;  5JPF A;  4I5N C;  4FBK A;  3H68 A;  2BQ8 X;  1S95 A;  1OID A;  2O8A A;  5JJT A;  1U32 A;  3QFN A;  4O4K A;  1T71 A;  3KBP A;  3V4Y A;  4TUG A;  1NNW A;  2NYL C;  3RQZ A;  4UT3 B;  2IAE C;  4M0V A;  4FBQ A;  2R17 A;  4HD0 A;  4H1Y P;  1SU1 A;  3E0J A;  1HO5 A;  3DSC A;  2P6B A;  2HYO A;  1KBP A;  1Z2X A;  1AUI A;  3C5W C;  3H63 A;  3H67 A;  3P71 C;  4V0V A;  1QFC A;  3GVE A;  3T1I A;  3RL3 A;  1MF8 A;  4OR9 A;  4XPN A;  4DHL A;  2ZOA A;  4O43 A;  4O5G A;  1S3L A;  1II7 A;  4WWL A;  5INB A;  3JYF A;  3H61 A;  3H69 A;  4H1S A;  2WDD A;  4IL1 A;  2QFR A;  4Q7F A;  2NXF A;  2DFJ A;  3C9F A;  4UT2 A;  2HY1 A;  3K7V C;  4F0Z A;  4DSY A;  4FBW A;  2WDC A;  4IYP C;  4J6O A;  4JA9 A;  3DSD A;  2IE3 C;  5C1V A;  3DW8 C;  2KKN A;  1Z2W A;  1XZW A;  3PSN A;  5HPE A;  2JOG A;  2GJU A;  1HP1 A;  3D03 A;  2HYP A;  3IB8 A;  4UWQ A;  2A22 A;  2DXN A;  3QFK A;  4H2B A;  3ZTV A;  3AUZ A;  4ORA A;  5JPE A;  2NPP C;  4V0W A;  2CV9 A;  3HVQ A;  4JA7 A;  1TCO A;  2AHD A;  2Z1A A;  3EGH A;  1JK7 A;  4V0X A;  4ZX2 A;  2WDE A;  2O8G A;  2BDX A;  3AV0 A;  2USH A;  4H2I A;  2Z06 A;  3CK2 A;  3QFM A;  3H62 B;  1USH A;  3IB7 A;  3FLO A;  3ZU0 A;  4FCX A;  2Z72 A;  4H2G A;  1IT6 A;  2ZBM A;  1G5B A;  4NZV A;  3H60 A;  1S8E A;  2QFP A;  5EQV A;  3IVD A;  2YVT A;  3N5U A;  3RL5 A;  1HPU A;  4LTY A;  3E7A A;  4TUI A;  2NYM C;  3H64 A;  4O24 A;  2ZO9 B;  5DNY A;  1XM7 A;  1UF3 A;  4MOV A;  5GTU A;  4LU9 A;  1M63 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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