4UWQA

Crystal structure of the disulfide-linked complex of the thiosulfodyrolase soxb with the carrier-protein soxyz from thermus thermophilus
Total Genus 163
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
163
sequence length
548
structure length
548
Chain Sequence
EDPRSLYDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEAILRYYGVERGTPLAYLLSYVDFVELARTFGPIGGMGALTALIRDQKARVEAEGGKALVLDGGDTWTNSGLSLLTRGEAVVRWQNLVGVDHMVSHCEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLDAALAERIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAGKALMRVDLKLWKGGIANLRVRVLPVLAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSETLLYKRDTLYSTWDQLVGEAVKAIYPEVEVVFSPAVRWGTTILPGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTSDPFYQQGGDVSRVFGLRYVLDPDAPTGERVREVEVGGRPLDPNRRYLAAAYGGRLQRVGEAKPGYEPRPIYEVLAEYLRSVGRVRVRPEPNVKVIGRNYRLPEVTG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords SULFUR OXIDATION PROTEIN SOXB
publication title Structural Basis for Specificity and Promiscuity in a Carrier Protein/Enzyme System from the Sulfur Cycle
pubmed doi rcsb
source organism Thermus thermophilus hb27
total genus 163
structure length 548
sequence length 548
chains with identical sequence D, G, J
ec nomenclature
pdb deposition date 2014-08-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 4uwqA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 4uwqA03
4B2OA 2HYPA 4KBPA 3ZU0A 1WAO1 2QJCA 2WDEA 4OR9A 4LU9A 5EQVA 5JPEA 2BDXA 3H68A 1V73A 3RL3A 4MOVA 5IOHA 4KKZA 4O24A 3C5WC 3QFKA 5GTUA 4WWLA 4O43A 4DT2A 4H1YP 4NZVA 3PSNA 3RL5A 2P6BA 2NYLC 4FCXA 4HD0A 3H67A 4H2BA 3T1IA 4MP0A 2O8AA 3H61A 3AV0A 1OIEA 1Z2WA 2XMOA 1U32A 1HO5A 2IE4C 3EGGA 2BCDA 4DHLA 4FBKA 4H2FA 4TUIA 1USHA 3K7WC 3ICFA 4V0WA 5JPFA 1S3MA 3H60A 3DSCA 5INBA 2HYOA 1HP1A 3IB8A 5J28A 4V0XA 1S8EA 4UT3A 3RL4A 3H64A 3RQZA 3THOB 3QFMA 4ORBA 2WDDA 1WARA 4LACC 2O8GA 3N5UA 1XZWA 2CV9A 3QFOA 3V4YA 1SU1A 1KBPA 3JYFA 2A22A 2Z72A 4F0ZA 4ZX2A 4ZVZA 4UT3B 2NXFA 5HPEA 5F3WA 1QHWA 3H63A 1AUIA 2YVTA 4UWQA 4O5GA 3KBPA 2WDFA 4JA9A 4I5LC 3IB7A 1OI8A 3GVEA 2Z06A 4O4KA 5B8IA 3K7VC 2JOGA 3P71C 2IAEC 1FJMA 1HPUA 2QFRA 4TUGA 1IT6A 4DSYA 5JJTA 4LTYA 4UT2A 1XM7A 1JK7A 2Z1AA 4JA7A 4IL1A 2USHA 4XPNA 3H69A 2NPPC 3EGHA 3E7BA 4M0VA 4IYPC 2WDCA 3IVDA 4MOYA 1S70A 1G5BA 2QFPA 3DW8C 4G9JA 2DFJA 4H2IA 1T71A 2BQ8X 2HY1A 4J6OA 1UTEA 4ORCA 3IVEA 1S3NA 2Q8UA 3TGHA 2NYMC 3DSDA 1UF3A 1M63A 3QG5C 4H2GA 4V0VA 3ZTVA 2GJUA 1S3LA 4YKEA 5DNYA 3QFNA 3H62B 1OIDA 1W24A 3FGAC 1NNWA 2R17A 2ZBMA 5C1VA 4FBWA 1Z2XA 1T70A 1TCOA 3HVQA 3E7AA 4ORAA 2KKNA 3AUZA 3CK2A 3THNA 4I5NC 2IE3C 1QFCA 1S95A 2AHDA 3C9FA 3H66A 4H1SA 3PSOA 4FBQA 1MF8A 3LL8A 4Q7FA 1II7A
chains in the Genus database with same CATH superfamily
4B2OA 2HYPA 4KBPA 3ZU0A 1WAO1 2QJCA 2DXNA 2WDEA 4OR9A 4LU9A 5EQVA 5JPEA 2BDXA 3H68A 1V73A 3RL3A 4MOVA 5IOHA 4KKZA 4O24A 3C5WC 3QFKA 5GTUA 4WWLA 4O43A 4DT2A 4H1YP 4NZVA 3PSNA 3RL5A 2P6BA 2NYLC 4FCXA 4HD0A 3H67A 4H2BA 3T1IA 4MP0A 2O8AA 3H61A 3AV0A 1OIEA 1Z2WA 2XMOA 1U32A 1HO5A 2IE4C 3EGGA 2DXLA 2BCDA 4DHLA 4FBKA 4H2FA 4TUIA 1USHA 3K7WC 3ICFA 4V0WA 5JPFA 1S3MA 3H60A 3DSCA 5INBA 2HYOA 1HP1A 3IB8A 5J28A 4V0XA 1S8EA 4UT3A 3RL4A 4F0ZA 3H64A 3RQZA 3THOB 3QFMA 4ORBA 2WDDA 1WARA 4LACC 2O8GA 3N5UA 1XZWA 2CV9A 3E0JA 3QFOA 1SU1A 1KBPA 3JYFA 2A22A 2Z72A 3V4YA 4ZX2A 4ZVZA 4UT3B 3D03A 2NXFA 5HPEA 5F3WA 1QHWA 3H63A 1AUIA 2YVTA 4UWQA 3FLOA 4O5GA 3KBPA 2WDFA 4JA9A 4I5LC 3IB7A 1OI8A 3GVEA 2Z06A 4O4KA 5B8IA 3K7VC 2JOGA 3P71C 2IAEC 1FJMA 1HPUA 2QFRA 4TUGA 1IT6A 4DSYA 5JJTA 4LTYA 4UT2A 1XM7A 1JK7A 2Z1AA 4JA7A 4IL1A 2USHA 4XPNA 3H69A 2NPPC 3EGHA 3E7BA 4M0VA 4IYPC 2WDCA 3IVDA 4MOYA 1S70A 1G5BA 2QFPA 3DW8C 4G9JA 2DFJA 4H2IA 1T71A 2BQ8X 2HY1A 4J6OA 1UTEA 4ORCA 2YEQA 3IVEA 1S3NA 2Q8UA 3TGHA 2NYMC 3DSDA 1UF3A 1M63A 3QG5C 4H2GA 4V0VA 2ZOAA 3ZTVA 2GJUA 1S3LA 4YKEA 5DNYA 3QFNA 3H62B 1OIDA 1W24A 3FGAC 1NNWA 2R17A 2ZBMA 5C1VA 4FBWA 1Z2XA 1T70A 1TCOA 3HVQA 2ZO9B 3E7AA 4ORAA 2KKNA 3AUZA 3CK2A 3THNA 4I5NC 2IE3C 1QFCA 1S95A 2AHDA 3C9FA 3H66A 4H1SA 3PSOA 4FBQA 1MF8A 3LL8A 4Q7FA 1II7A
chains in the Genus database with same CATH topology
4B2OA 2HYPA 4KBPA 3ZU0A 1WAO1 2QJCA 2DXNA 2WDEA 4OR9A 4LU9A 5EQVA 5JPEA 2BDXA 3H68A 1V73A 3RL3A 4MOVA 5IOHA 4KKZA 4O24A 3C5WC 3QFKA 5GTUA 4WWLA 4O43A 4DT2A 4H1YP 4NZVA 3PSNA 3RL5A 2P6BA 2NYLC 4FCXA 4HD0A 3H67A 4H2BA 3T1IA 4MP0A 2O8AA 3H61A 3AV0A 1OIEA 1Z2WA 2XMOA 1U32A 1HO5A 2IE4C 3EGGA 2DXLA 2BCDA 4DHLA 4FBKA 4H2FA 4TUIA 1USHA 3K7WC 3ICFA 4V0WA 5JPFA 1S3MA 3H60A 3DSCA 5INBA 2HYOA 1HP1A 3IB8A 5J28A 4V0XA 1S8EA 4UT3A 3RL4A 4F0ZA 3H64A 3RQZA 3THOB 3QFMA 4ORBA 2WDDA 1WARA 4LACC 2O8GA 3N5UA 1XZWA 2CV9A 3E0JA 3QFOA 1SU1A 1KBPA 3JYFA 2A22A 2Z72A 3V4YA 4ZX2A 4ZVZA 4UT3B 3D03A 2NXFA 5HPEA 5F3WA 1QHWA 3H63A 1AUIA 2YVTA 4UWQA 3FLOA 4O5GA 3KBPA 2WDFA 4JA9A 4I5LC 3IB7A 1OI8A 3GVEA 2Z06A 4O4KA 5B8IA 3K7VC 2JOGA 3P71C 2IAEC 1FJMA 1HPUA 2QFRA 4TUGA 1IT6A 4DSYA 5JJTA 4LTYA 4UT2A 1XM7A 1JK7A 2Z1AA 4JA7A 4IL1A 2USHA 4XPNA 3H69A 2NPPC 3EGHA 3E7BA 4M0VA 4IYPC 2WDCA 3IVDA 4MOYA 1S70A 1G5BA 2QFPA 3DW8C 4G9JA 2DFJA 4H2IA 1T71A 2BQ8X 2HY1A 4J6OA 1UTEA 4ORCA 2YEQA 3IVEA 1S3NA 2Q8UA 3TGHA 2NYMC 3DSDA 1UF3A 1M63A 3QG5C 4H2GA 4V0VA 2ZOAA 3ZTVA 2GJUA 1S3LA 4YKEA 5DNYA 3QFNA 3H62B 1OIDA 1W24A 3FGAC 1NNWA 2R17A 2ZBMA 5C1VA 4FBWA 1Z2XA 1T70A 1TCOA 3HVQA 2ZO9B 3E7AA 4ORAA 2KKNA 3AUZA 3CK2A 3THNA 4I5NC 2IE3C 1QFCA 1S95A 2AHDA 3C9FA 3H66A 4H1SA 3PSOA 4FBQA 1MF8A 3LL8A 4Q7FA 1II7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4B2O A;  2HYP A;  4KBP A;  3ZU0 A;  1WAO 1;  2QJC A;  2WDE A;  4OR9 A;  4LU9 A;  5EQV A;  5JPE A;  2BDX A;  3H68 A;  1V73 A;  3RL3 A;  4MOV A;  5IOH A;  4KKZ A;  4O24 A;  3C5W C;  3QFK A;  5GTU A;  4WWL A;  4O43 A;  4DT2 A;  4H1Y P;  4NZV A;  3PSN A;  3RL5 A;  2P6B A;  2NYL C;  4FCX A;  4HD0 A;  3H67 A;  4H2B A;  3T1I A;  4MP0 A;  2O8A A;  3H61 A;  3AV0 A;  1OIE A;  1Z2W A;  2XMO A;  1U32 A;  1HO5 A;  2IE4 C;  3EGG A;  2BCD A;  4DHL A;  4FBK A;  4H2F A;  4TUI A;  1USH A;  3K7W C;  3ICF A;  4V0W A;  5JPF A;  1S3M A;  3H60 A;  3DSC A;  5INB A;  2HYO A;  1HP1 A;  3IB8 A;  5J28 A;  4V0X A;  1S8E A;  4UT3 A;  3RL4 A;  3H64 A;  3RQZ A;  3THO B;  3QFM A;  4ORB A;  2WDD A;  1WAR A;  4LAC C;  2O8G A;  3N5U A;  1XZW A;  2CV9 A;  3QFO A;  3V4Y A;  1SU1 A;  1KBP A;  3JYF A;  2A22 A;  2Z72 A;  4F0Z A;  4ZX2 A;  4ZVZ A;  4UT3 B;  2NXF A;  5HPE A;  5F3W A;  1QHW A;  3H63 A;  1AUI A;  2YVT A;  4UWQ A;  4O5G A;  3KBP A;  2WDF A;  4JA9 A;  4I5L C;  3IB7 A;  1OI8 A;  3GVE A;  2Z06 A;  4O4K A;  5B8I A;  3K7V C;  2JOG A;  3P71 C;  2IAE C;  1FJM A;  1HPU A;  2QFR A;  4TUG A;  1IT6 A;  4DSY A;  5JJT A;  4LTY A;  4UT2 A;  1XM7 A;  1JK7 A;  2Z1A A;  4JA7 A;  4IL1 A;  2USH A;  4XPN A;  3H69 A;  2NPP C;  3EGH A;  3E7B A;  4M0V A;  4IYP C;  2WDC A;  3IVD A;  4MOY A;  1S70 A;  1G5B A;  2QFP A;  3DW8 C;  4G9J A;  2DFJ A;  4H2I A;  1T71 A;  2BQ8 X;  2HY1 A;  4J6O A;  1UTE A;  4ORC A;  3IVE A;  1S3N A;  2Q8U A;  3TGH A;  2NYM C;  3DSD A;  1UF3 A;  1M63 A;  3QG5 C;  4H2G A;  4V0V A;  3ZTV A;  2GJU A;  1S3L A;  4YKE A;  5DNY A;  3QFN A;  3H62 B;  1OID A;  1W24 A;  3FGA C;  1NNW A;  2R17 A;  2ZBM A;  5C1V A;  4FBW A;  1Z2X A;  1T70 A;  1TCO A;  3HVQ A;  3E7A A;  4ORA A;  2KKN A;  3AUZ A;  3CK2 A;  3THN A;  4I5N C;  2IE3 C;  1QFC A;  1S95 A;  2AHD A;  3C9F A;  3H66 A;  4H1S A;  3PSO A;  4FBQ A;  1MF8 A;  3LL8 A;  4Q7F A;  1II7 A; 
#chains in the Genus database with same CATH topology
 4B2O A;  2HYP A;  4KBP A;  3ZU0 A;  1WAO 1;  2QJC A;  2DXN A;  2WDE A;  4OR9 A;  4LU9 A;  5EQV A;  5JPE A;  2BDX A;  3H68 A;  1V73 A;  3RL3 A;  4MOV A;  5IOH A;  4KKZ A;  4O24 A;  3C5W C;  3QFK A;  5GTU A;  4WWL A;  4O43 A;  4DT2 A;  4H1Y P;  4NZV A;  3PSN A;  3RL5 A;  2P6B A;  2NYL C;  4FCX A;  4HD0 A;  3H67 A;  4H2B A;  3T1I A;  4MP0 A;  2O8A A;  3H61 A;  3AV0 A;  1OIE A;  1Z2W A;  2XMO A;  1U32 A;  1HO5 A;  2IE4 C;  3EGG A;  2DXL A;  2BCD A;  4DHL A;  4FBK A;  4H2F A;  4TUI A;  1USH A;  3K7W C;  3ICF A;  4V0W A;  5JPF A;  1S3M A;  3H60 A;  3DSC A;  5INB A;  2HYO A;  1HP1 A;  3IB8 A;  5J28 A;  4V0X A;  1S8E A;  4UT3 A;  3RL4 A;  4F0Z A;  3H64 A;  3RQZ A;  3THO B;  3QFM A;  4ORB A;  2WDD A;  1WAR A;  4LAC C;  2O8G A;  3N5U A;  1XZW A;  2CV9 A;  3E0J A;  3QFO A;  1SU1 A;  1KBP A;  3JYF A;  2A22 A;  2Z72 A;  3V4Y A;  4ZX2 A;  4ZVZ A;  4UT3 B;  3D03 A;  2NXF A;  5HPE A;  5F3W A;  1QHW A;  3H63 A;  1AUI A;  2YVT A;  4UWQ A;  3FLO A;  4O5G A;  3KBP A;  2WDF A;  4JA9 A;  4I5L C;  3IB7 A;  1OI8 A;  3GVE A;  2Z06 A;  4O4K A;  5B8I A;  3K7V C;  2JOG A;  3P71 C;  2IAE C;  1FJM A;  1HPU A;  2QFR A;  4TUG A;  1IT6 A;  4DSY A;  5JJT A;  4LTY A;  4UT2 A;  1XM7 A;  1JK7 A;  2Z1A A;  4JA7 A;  4IL1 A;  2USH A;  4XPN A;  3H69 A;  2NPP C;  3EGH A;  3E7B A;  4M0V A;  4IYP C;  2WDC A;  3IVD A;  4MOY A;  1S70 A;  1G5B A;  2QFP A;  3DW8 C;  4G9J A;  2DFJ A;  4H2I A;  1T71 A;  2BQ8 X;  2HY1 A;  4J6O A;  1UTE A;  4ORC A;  2YEQ A;  3IVE A;  1S3N A;  2Q8U A;  3TGH A;  2NYM C;  3DSD A;  1UF3 A;  1M63 A;  3QG5 C;  4H2G A;  4V0V A;  2ZOA A;  3ZTV A;  2GJU A;  1S3L A;  4YKE A;  5DNY A;  3QFN A;  3H62 B;  1OID A;  1W24 A;  3FGA C;  1NNW A;  2R17 A;  2ZBM A;  5C1V A;  4FBW A;  1Z2X A;  1T70 A;  1TCO A;  3HVQ A;  2ZO9 B;  3E7A A;  4ORA A;  2KKN A;  3AUZ A;  3CK2 A;  3THN A;  4I5N C;  2IE3 C;  1QFC A;  1S95 A;  2AHD A;  3C9F A;  3H66 A;  4H1S A;  3PSO A;  4FBQ A;  1MF8 A;  3LL8 A;  4Q7F A;  1II7 A; 
#chains in the Genus database with same CATH homology
 4B2O A;  2HYP A;  4KBP A;  3ZU0 A;  1WAO 1;  2QJC A;  2DXN A;  2WDE A;  4OR9 A;  4LU9 A;  5EQV A;  5JPE A;  2BDX A;  3H68 A;  1V73 A;  3RL3 A;  4MOV A;  5IOH A;  4KKZ A;  4O24 A;  3C5W C;  3QFK A;  5GTU A;  4WWL A;  4O43 A;  4DT2 A;  4H1Y P;  4NZV A;  3PSN A;  3RL5 A;  2P6B A;  2NYL C;  4FCX A;  4HD0 A;  3H67 A;  4H2B A;  3T1I A;  4MP0 A;  2O8A A;  3H61 A;  3AV0 A;  1OIE A;  1Z2W A;  2XMO A;  1U32 A;  1HO5 A;  2IE4 C;  3EGG A;  2DXL A;  2BCD A;  4DHL A;  4FBK A;  4H2F A;  4TUI A;  1USH A;  3K7W C;  3ICF A;  4V0W A;  5JPF A;  1S3M A;  3H60 A;  3DSC A;  5INB A;  2HYO A;  1HP1 A;  3IB8 A;  5J28 A;  4V0X A;  1S8E A;  4UT3 A;  3RL4 A;  4F0Z A;  3H64 A;  3RQZ A;  3THO B;  3QFM A;  4ORB A;  2WDD A;  1WAR A;  4LAC C;  2O8G A;  3N5U A;  1XZW A;  2CV9 A;  3E0J A;  3QFO A;  1SU1 A;  1KBP A;  3JYF A;  2A22 A;  2Z72 A;  3V4Y A;  4ZX2 A;  4ZVZ A;  4UT3 B;  3D03 A;  2NXF A;  5HPE A;  5F3W A;  1QHW A;  3H63 A;  1AUI A;  2YVT A;  4UWQ A;  3FLO A;  4O5G A;  3KBP A;  2WDF A;  4JA9 A;  4I5L C;  3IB7 A;  1OI8 A;  3GVE A;  2Z06 A;  4O4K A;  5B8I A;  3K7V C;  2JOG A;  3P71 C;  2IAE C;  1FJM A;  1HPU A;  2QFR A;  4TUG A;  1IT6 A;  4DSY A;  5JJT A;  4LTY A;  4UT2 A;  1XM7 A;  1JK7 A;  2Z1A A;  4JA7 A;  4IL1 A;  2USH A;  4XPN A;  3H69 A;  2NPP C;  3EGH A;  3E7B A;  4M0V A;  4IYP C;  2WDC A;  3IVD A;  4MOY A;  1S70 A;  1G5B A;  2QFP A;  3DW8 C;  4G9J A;  2DFJ A;  4H2I A;  1T71 A;  2BQ8 X;  2HY1 A;  4J6O A;  1UTE A;  4ORC A;  2YEQ A;  3IVE A;  1S3N A;  2Q8U A;  3TGH A;  2NYM C;  3DSD A;  1UF3 A;  1M63 A;  3QG5 C;  4H2G A;  4V0V A;  2ZOA A;  3ZTV A;  2GJU A;  1S3L A;  4YKE A;  5DNY A;  3QFN A;  3H62 B;  1OID A;  1W24 A;  3FGA C;  1NNW A;  2R17 A;  2ZBM A;  5C1V A;  4FBW A;  1Z2X A;  1T70 A;  1TCO A;  3HVQ A;  2ZO9 B;  3E7A A;  4ORA A;  2KKN A;  3AUZ A;  3CK2 A;  3THN A;  4I5N C;  2IE3 C;  1QFC A;  1S95 A;  2AHD A;  3C9F A;  3H66 A;  4H1S A;  3PSO A;  4FBQ A;  1MF8 A;  3LL8 A;  4Q7F A;  1II7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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