1WARA

Recombinant human purple acid phosphatase expressed in pichia pastoris
Total Genus 109
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
109
sequence length
310
structure length
310
Chain Sequence
EAEAEFATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIAYSKISKRWNFPSPFYRLHFKIPQTNVSVAIFMLDTVTLCGNSDDFLSQQPERPRDVKLARTQLSWLKKQLAAAREDYVLVAGHYPVWSIAEHGPTHCLVKQLRPLLATYGVTAYLCGHDHNLQYLQDENGVGYVLSGAGNFMDPSKRHQRKVPNGYLRFHYGTEDSLGGFAYVEISSKEMTVTYIEASGKSLFKTRLPRRARP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Homo sapiens
publication title Crystal Structures of Recombinant Human Purple Acid Phosphatase with and without an Inhibitory Conformation of the Repression Loop.
pubmed doi rcsb
molecule keywords HUMAN PURPLE ACID PHOSPHATASE
total genus 109
structure length 310
sequence length 310
ec nomenclature ec 3.1.3.2: Acid phosphatase.
pdb deposition date 2004-10-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 1warA00
5JJTA 4UT3A 1WARA 3KBPA 4FBWA 4HD0A 1OIEA 1QHWA 3IB8A 5HPEA 1Z2WA 4YKEA 1S3NA 4LU9A 2HYOA 3H68A 4XPNA 3V4YA 2JOGA 5B8IA 4O5GA 1JK7A 2HY1A 2HYPA 3CK2A 2WDFA 1G5BA 4V0XA 2CV9A 3H63A 2KKNA 1HPUA 1T70A 2O8GA 1FJMA 3RL4A 1UF3A 3QFOA 4OR9A 1OIDA 3PSNA 1TCOA 1XM7A 2BCDA 4NZVA 4V0VA 2AHDA 2Q8UA 4O4KA 1II7A 2WDEA 1USHA 3AV0A 4LTYA 4O43A 5INBA 2WDDA 2QFPA 5F3WA 3DSCA 3E7AA 3EGGA 3TGHA 3H61A 2WDCA 3AUZA 3H60A 4FBKA 4KBPA 1AUIA 4I5LC 4I5NC 3LL8A 4V0WA 1NNWA 1S70A 1S3LA 1QFCA 3EGHA 4FCXA 4KKZA 4ZVZA 4UT3B 5DNYA 3K7WC 1SU1A 1MF8A 2NPPC 1M63A 3H69A 3HVQA 4H2IA 3THOB 2NXFA 4TUIA 3ZU0A 4WWLA 3K7VC 4IYPC 2DFJA 5GTUA 1XZWA 1S95A 1T71A 1Z2XA 3P71C 2BDXA 3RL3A 2P6BA 3IVEA 4H2BA 1IT6A 2ZBMA 1V73A 4H2FA 4H2GA 3H67A 3C9FA 4H1SA 4JA7A 4M0VA 3ZTVA 4DHLA 4Q7FA 4DT2A 2Z06A 4MOVA 5JPEA 2GJUA 5J28A 4MOYA 3C5WC 3IVDA 4DSYA 5IOHA 3T1IA 2USHA 2Z72A 3QFMA 4J6OA 2IE3C 1UTEA 1HP1A 2IAEC 3N5UA 2NYLC 1S3MA 3GVEA 3IB7A 5EQVA 4IL1A 2YVTA 2R17A 4H1YP 4FBQA 3DSDA 2Z1AA 3ICFA 4LACC 4ZX2A 3RQZA 1OI8A 3THNA 2IE4C 1HO5A 4UT2A 2QFRA 5C1VA 3QG5C 2BQ8X 3QFKA 1KBPA 4JA9A 4UWQA 4TUGA 3DW8C 3E7BA 2O8AA 4O24A 2A22A 2XMOA 3PSOA 3QFNA 2NYMC 4F0ZA 3H62B 3RL5A 1WAO1 1S8EA 3H66A 3H64A 4MP0A 4ORAA 1U32A 3JYFA 4ORCA 3FGAC 4ORBA 1W24A 2QJCA 4G9JA 4B2OA 5JPFA
chains in the Genus database with same CATH superfamily
5JJTA 4UT3A 1WARA 3KBPA 4FBWA 4HD0A 1OIEA 1QHWA 3IB8A 5HPEA 1Z2WA 4YKEA 1S3NA 4LU9A 2HYOA 3H68A 4XPNA 3V4YA 2JOGA 5B8IA 4O5GA 1JK7A 2HY1A 2HYPA 3CK2A 2WDFA 1G5BA 4V0XA 2CV9A 3H63A 2KKNA 1HPUA 1T70A 2O8GA 1FJMA 2DXNA 3RL4A 1UF3A 3QFOA 4OR9A 1OIDA 3PSNA 1TCOA 1XM7A 2BCDA 4NZVA 4V0VA 2AHDA 2YEQA 2Q8UA 4O4KA 1II7A 2WDEA 1USHA 3AV0A 4LTYA 4O43A 5INBA 2WDDA 2QFPA 2DXLA 5F3WA 3DSCA 3E7AA 3EGGA 3TGHA 3H61A 2WDCA 3AUZA 3H60A 4FBKA 4KBPA 1AUIA 4I5LC 4I5NC 3LL8A 4V0WA 1NNWA 1S70A 1S3LA 1QFCA 3EGHA 4FCXA 4KKZA 4ZVZA 4UT3B 5DNYA 3K7WC 1SU1A 2ZOAA 1MF8A 2NPPC 1M63A 3H69A 3HVQA 4H2IA 3THOB 2NXFA 3FLOA 3ZU0A 4WWLA 3K7VC 4IYPC 4TUIA 3D03A 2DFJA 5GTUA 1XZWA 1S95A 1T71A 1Z2XA 3P71C 2BDXA 3RL3A 2P6BA 3IVEA 4H2BA 1IT6A 2ZBMA 1V73A 4H2FA 4H2GA 3H67A 3C9FA 4H1SA 4JA7A 4M0VA 3ZTVA 4DHLA 4Q7FA 4DT2A 2Z06A 4MOVA 5JPEA 2GJUA 5J28A 4MOYA 3E0JA 3C5WC 3IVDA 4DSYA 5IOHA 3T1IA 2USHA 2Z72A 3QFMA 4J6OA 2IE3C 1UTEA 1HP1A 2IAEC 3N5UA 2NYLC 1S3MA 3GVEA 3IB7A 5EQVA 4IL1A 2YVTA 2R17A 4H1YP 4FBQA 3DSDA 2Z1AA 3ICFA 4LACC 4ZX2A 3RQZA 1OI8A 3THNA 2IE4C 2ZO9B 1HO5A 4UT2A 2QFRA 5C1VA 3QG5C 2BQ8X 3QFKA 1KBPA 4JA9A 4UWQA 4TUGA 3DW8C 3E7BA 2O8AA 4O24A 2A22A 2XMOA 3PSOA 3QFNA 2NYMC 4F0ZA 3H62B 3RL5A 1WAO1 1S8EA 3H66A 3H64A 4MP0A 4ORAA 1U32A 3JYFA 4ORCA 3FGAC 4ORBA 1W24A 2QJCA 4G9JA 4B2OA 5JPFA
chains in the Genus database with same CATH topology
5JJTA 4UT3A 1WARA 3KBPA 4FBWA 4HD0A 1OIEA 1QHWA 3IB8A 5HPEA 1Z2WA 4YKEA 1S3NA 4LU9A 2HYOA 3H68A 4XPNA 3V4YA 2JOGA 5B8IA 4O5GA 1JK7A 2HY1A 2HYPA 3CK2A 2WDFA 1G5BA 4V0XA 2CV9A 3H63A 2KKNA 1HPUA 1T70A 2O8GA 1FJMA 2DXNA 3RL4A 1UF3A 3QFOA 4OR9A 1OIDA 3PSNA 1TCOA 1XM7A 2BCDA 4NZVA 4V0VA 2AHDA 2YEQA 2Q8UA 4O4KA 1II7A 2WDEA 1USHA 3AV0A 4LTYA 4O43A 5INBA 2WDDA 2QFPA 2DXLA 5F3WA 3DSCA 3E7AA 3EGGA 3TGHA 3H61A 2WDCA 3AUZA 3H60A 4FBKA 4KBPA 1AUIA 4I5LC 4I5NC 3LL8A 4V0WA 1NNWA 1S70A 1S3LA 1QFCA 3EGHA 4FCXA 4KKZA 4ZVZA 4UT3B 5DNYA 3K7WC 1SU1A 2ZOAA 1MF8A 2NPPC 1M63A 3H69A 3HVQA 4H2IA 3THOB 2NXFA 3FLOA 3ZU0A 4WWLA 3K7VC 4IYPC 4TUIA 3D03A 2DFJA 5GTUA 1XZWA 1S95A 1T71A 1Z2XA 3P71C 2BDXA 3RL3A 2P6BA 3IVEA 4H2BA 1IT6A 2ZBMA 1V73A 4H2FA 4H2GA 3H67A 3C9FA 4H1SA 4JA7A 4M0VA 3ZTVA 4DHLA 4Q7FA 4DT2A 2Z06A 4MOVA 5JPEA 2GJUA 5J28A 4MOYA 3E0JA 3C5WC 3IVDA 4DSYA 5IOHA 3T1IA 2USHA 2Z72A 3QFMA 4J6OA 2IE3C 1UTEA 1HP1A 2IAEC 3N5UA 2NYLC 1S3MA 3GVEA 3IB7A 5EQVA 4IL1A 2YVTA 2R17A 4H1YP 4FBQA 3DSDA 2Z1AA 3ICFA 4LACC 4ZX2A 3RQZA 1OI8A 3THNA 2IE4C 2ZO9B 1HO5A 4UT2A 2QFRA 5C1VA 3QG5C 2BQ8X 3QFKA 1KBPA 4JA9A 4UWQA 4TUGA 3DW8C 3E7BA 2O8AA 4O24A 2A22A 2XMOA 3PSOA 3QFNA 2NYMC 4F0ZA 3H62B 3RL5A 1WAO1 1S8EA 3H66A 3H64A 4MP0A 4ORAA 1U32A 3JYFA 4ORCA 3FGAC 4ORBA 1W24A 2QJCA 4G9JA 4B2OA 5JPFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5JJT A;  4UT3 A;  1WAR A;  3KBP A;  4FBW A;  4HD0 A;  1OIE A;  1QHW A;  3IB8 A;  5HPE A;  1Z2W A;  4YKE A;  1S3N A;  4LU9 A;  2HYO A;  3H68 A;  4XPN A;  3V4Y A;  2JOG A;  5B8I A;  4O5G A;  1JK7 A;  2HY1 A;  2HYP A;  3CK2 A;  2WDF A;  1G5B A;  4V0X A;  2CV9 A;  3H63 A;  2KKN A;  1HPU A;  1T70 A;  2O8G A;  1FJM A;  3RL4 A;  1UF3 A;  3QFO A;  4OR9 A;  1OID A;  3PSN A;  1TCO A;  1XM7 A;  2BCD A;  4NZV A;  4V0V A;  2AHD A;  2Q8U A;  4O4K A;  1II7 A;  2WDE A;  1USH A;  3AV0 A;  4LTY A;  4O43 A;  5INB A;  2WDD A;  2QFP A;  5F3W A;  3DSC A;  3E7A A;  3EGG A;  3TGH A;  3H61 A;  2WDC A;  3AUZ A;  3H60 A;  4FBK A;  4KBP A;  1AUI A;  4I5L C;  4I5N C;  3LL8 A;  4V0W A;  1NNW A;  1S70 A;  1S3L A;  1QFC A;  3EGH A;  4FCX A;  4KKZ A;  4ZVZ A;  4UT3 B;  5DNY A;  3K7W C;  1SU1 A;  1MF8 A;  2NPP C;  1M63 A;  3H69 A;  3HVQ A;  4H2I A;  3THO B;  2NXF A;  4TUI A;  3ZU0 A;  4WWL A;  3K7V C;  4IYP C;  2DFJ A;  5GTU A;  1XZW A;  1S95 A;  1T71 A;  1Z2X A;  3P71 C;  2BDX A;  3RL3 A;  2P6B A;  3IVE A;  4H2B A;  1IT6 A;  2ZBM A;  1V73 A;  4H2F A;  4H2G A;  3H67 A;  3C9F A;  4H1S A;  4JA7 A;  4M0V A;  3ZTV A;  4DHL A;  4Q7F A;  4DT2 A;  2Z06 A;  4MOV A;  5JPE A;  2GJU A;  5J28 A;  4MOY A;  3C5W C;  3IVD A;  4DSY A;  5IOH A;  3T1I A;  2USH A;  2Z72 A;  3QFM A;  4J6O A;  2IE3 C;  1UTE A;  1HP1 A;  2IAE C;  3N5U A;  2NYL C;  1S3M A;  3GVE A;  3IB7 A;  5EQV A;  4IL1 A;  2YVT A;  2R17 A;  4H1Y P;  4FBQ A;  3DSD A;  2Z1A A;  3ICF A;  4LAC C;  4ZX2 A;  3RQZ A;  1OI8 A;  3THN A;  2IE4 C;  1HO5 A;  4UT2 A;  2QFR A;  5C1V A;  3QG5 C;  2BQ8 X;  3QFK A;  1KBP A;  4JA9 A;  4UWQ A;  4TUG A;  3DW8 C;  3E7B A;  2O8A A;  4O24 A;  2A22 A;  2XMO A;  3PSO A;  3QFN A;  2NYM C;  4F0Z A;  3H62 B;  3RL5 A;  1WAO 1;  1S8E A;  3H66 A;  3H64 A;  4MP0 A;  4ORA A;  1U32 A;  3JYF A;  4ORC A;  3FGA C;  4ORB A;  1W24 A;  2QJC A;  4G9J A;  4B2O A;  5JPF A; 
#chains in the Genus database with same CATH topology
 5JJT A;  4UT3 A;  1WAR A;  3KBP A;  4FBW A;  4HD0 A;  1OIE A;  1QHW A;  3IB8 A;  5HPE A;  1Z2W A;  4YKE A;  1S3N A;  4LU9 A;  2HYO A;  3H68 A;  4XPN A;  3V4Y A;  2JOG A;  5B8I A;  4O5G A;  1JK7 A;  2HY1 A;  2HYP A;  3CK2 A;  2WDF A;  1G5B A;  4V0X A;  2CV9 A;  3H63 A;  2KKN A;  1HPU A;  1T70 A;  2O8G A;  1FJM A;  2DXN A;  3RL4 A;  1UF3 A;  3QFO A;  4OR9 A;  1OID A;  3PSN A;  1TCO A;  1XM7 A;  2BCD A;  4NZV A;  4V0V A;  2AHD A;  2YEQ A;  2Q8U A;  4O4K A;  1II7 A;  2WDE A;  1USH A;  3AV0 A;  4LTY A;  4O43 A;  5INB A;  2WDD A;  2QFP A;  2DXL A;  5F3W A;  3DSC A;  3E7A A;  3EGG A;  3TGH A;  3H61 A;  2WDC A;  3AUZ A;  3H60 A;  4FBK A;  4KBP A;  1AUI A;  4I5L C;  4I5N C;  3LL8 A;  4V0W A;  1NNW A;  1S70 A;  1S3L A;  1QFC A;  3EGH A;  4FCX A;  4KKZ A;  4ZVZ A;  4UT3 B;  5DNY A;  3K7W C;  1SU1 A;  2ZOA A;  1MF8 A;  2NPP C;  1M63 A;  3H69 A;  3HVQ A;  4H2I A;  3THO B;  2NXF A;  3FLO A;  3ZU0 A;  4WWL A;  3K7V C;  4IYP C;  4TUI A;  3D03 A;  2DFJ A;  5GTU A;  1XZW A;  1S95 A;  1T71 A;  1Z2X A;  3P71 C;  2BDX A;  3RL3 A;  2P6B A;  3IVE A;  4H2B A;  1IT6 A;  2ZBM A;  1V73 A;  4H2F A;  4H2G A;  3H67 A;  3C9F A;  4H1S A;  4JA7 A;  4M0V A;  3ZTV A;  4DHL A;  4Q7F A;  4DT2 A;  2Z06 A;  4MOV A;  5JPE A;  2GJU A;  5J28 A;  4MOY A;  3E0J A;  3C5W C;  3IVD A;  4DSY A;  5IOH A;  3T1I A;  2USH A;  2Z72 A;  3QFM A;  4J6O A;  2IE3 C;  1UTE A;  1HP1 A;  2IAE C;  3N5U A;  2NYL C;  1S3M A;  3GVE A;  3IB7 A;  5EQV A;  4IL1 A;  2YVT A;  2R17 A;  4H1Y P;  4FBQ A;  3DSD A;  2Z1A A;  3ICF A;  4LAC C;  4ZX2 A;  3RQZ A;  1OI8 A;  3THN A;  2IE4 C;  2ZO9 B;  1HO5 A;  4UT2 A;  2QFR A;  5C1V A;  3QG5 C;  2BQ8 X;  3QFK A;  1KBP A;  4JA9 A;  4UWQ A;  4TUG A;  3DW8 C;  3E7B A;  2O8A A;  4O24 A;  2A22 A;  2XMO A;  3PSO A;  3QFN A;  2NYM C;  4F0Z A;  3H62 B;  3RL5 A;  1WAO 1;  1S8E A;  3H66 A;  3H64 A;  4MP0 A;  4ORA A;  1U32 A;  3JYF A;  4ORC A;  3FGA C;  4ORB A;  1W24 A;  2QJC A;  4G9J A;  4B2O A;  5JPF A; 
#chains in the Genus database with same CATH homology
 5JJT A;  4UT3 A;  1WAR A;  3KBP A;  4FBW A;  4HD0 A;  1OIE A;  1QHW A;  3IB8 A;  5HPE A;  1Z2W A;  4YKE A;  1S3N A;  4LU9 A;  2HYO A;  3H68 A;  4XPN A;  3V4Y A;  2JOG A;  5B8I A;  4O5G A;  1JK7 A;  2HY1 A;  2HYP A;  3CK2 A;  2WDF A;  1G5B A;  4V0X A;  2CV9 A;  3H63 A;  2KKN A;  1HPU A;  1T70 A;  2O8G A;  1FJM A;  2DXN A;  3RL4 A;  1UF3 A;  3QFO A;  4OR9 A;  1OID A;  3PSN A;  1TCO A;  1XM7 A;  2BCD A;  4NZV A;  4V0V A;  2AHD A;  2YEQ A;  2Q8U A;  4O4K A;  1II7 A;  2WDE A;  1USH A;  3AV0 A;  4LTY A;  4O43 A;  5INB A;  2WDD A;  2QFP A;  2DXL A;  5F3W A;  3DSC A;  3E7A A;  3EGG A;  3TGH A;  3H61 A;  2WDC A;  3AUZ A;  3H60 A;  4FBK A;  4KBP A;  1AUI A;  4I5L C;  4I5N C;  3LL8 A;  4V0W A;  1NNW A;  1S70 A;  1S3L A;  1QFC A;  3EGH A;  4FCX A;  4KKZ A;  4ZVZ A;  4UT3 B;  5DNY A;  3K7W C;  1SU1 A;  2ZOA A;  1MF8 A;  2NPP C;  1M63 A;  3H69 A;  3HVQ A;  4H2I A;  3THO B;  2NXF A;  3FLO A;  3ZU0 A;  4WWL A;  3K7V C;  4IYP C;  4TUI A;  3D03 A;  2DFJ A;  5GTU A;  1XZW A;  1S95 A;  1T71 A;  1Z2X A;  3P71 C;  2BDX A;  3RL3 A;  2P6B A;  3IVE A;  4H2B A;  1IT6 A;  2ZBM A;  1V73 A;  4H2F A;  4H2G A;  3H67 A;  3C9F A;  4H1S A;  4JA7 A;  4M0V A;  3ZTV A;  4DHL A;  4Q7F A;  4DT2 A;  2Z06 A;  4MOV A;  5JPE A;  2GJU A;  5J28 A;  4MOY A;  3E0J A;  3C5W C;  3IVD A;  4DSY A;  5IOH A;  3T1I A;  2USH A;  2Z72 A;  3QFM A;  4J6O A;  2IE3 C;  1UTE A;  1HP1 A;  2IAE C;  3N5U A;  2NYL C;  1S3M A;  3GVE A;  3IB7 A;  5EQV A;  4IL1 A;  2YVT A;  2R17 A;  4H1Y P;  4FBQ A;  3DSD A;  2Z1A A;  3ICF A;  4LAC C;  4ZX2 A;  3RQZ A;  1OI8 A;  3THN A;  2IE4 C;  2ZO9 B;  1HO5 A;  4UT2 A;  2QFR A;  5C1V A;  3QG5 C;  2BQ8 X;  3QFK A;  1KBP A;  4JA9 A;  4UWQ A;  4TUG A;  3DW8 C;  3E7B A;  2O8A A;  4O24 A;  2A22 A;  2XMO A;  3PSO A;  3QFN A;  2NYM C;  4F0Z A;  3H62 B;  3RL5 A;  1WAO 1;  1S8E A;  3H66 A;  3H64 A;  4MP0 A;  4ORA A;  1U32 A;  3JYF A;  4ORC A;  3FGA C;  4ORB A;  1W24 A;  2QJC A;  4G9J A;  4B2O A;  5JPF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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