3QFKA

2.05 angstrom crystal structure of putative 5'-nucleotidase from staphylococcus aureus in complex with alpha-ketoglutarate
Total Genus 157
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
157
sequence length
510
structure length
510
Chain Sequence
SNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDFYNRMAFDFGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHSAFEILQQYLPEMKRHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAFSKDIDIFITGHQHRQIAERFKQTAVIQPGTRGTTVGRVVLSTDEYENLSVESCELLPVIDDSTFTIDEDDQHLRKQLEDWLDYEITTLPYDMTINHAFEARVAPHPFTNFMNYALLEKSDADVACTALFDSASGFKQVVTMRDVINNYPFPNTFKVLAVSGAKLKEAIERSAEYFDVKNDEVSVSADFLEPKPQHFNYDIYGGVSYTIHVGRPKGQRVSNMMIQGHAVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title 2.05 Angstrom Crystal Structure of Putative 5'-Nucleotidase from Staphylococcus aureus in complex with alpha-ketoglutarate.
rcsb
molecule tags Hydrolase
source organism Staphylococcus aureus subsp. aureus
molecule keywords Uncharacterized protein
total genus 157
structure length 510
sequence length 510
ec nomenclature
pdb deposition date 2011-01-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 3qfkA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 3qfkA02
1S70A 3EGGA 1T71A 5IOHA 3E7AA 2IAEC 2NYMC 4OR9A 2Z06A 1UTEA 1OIEA 4ORCA 2KKNA 3RL5A 3ZU0A 4H2BA 4V0XA 3H69A 1WARA 1S3NA 4O43A 1TCOA 1MF8A 4XPNA 3TGHA 3DW8C 4V0VA 1G5BA 4ORAA 4H2IA 2QFRA 3LL8A 4HD0A 5DNYA 5B8IA 4DT2A 1NNWA 4LU9A 2WDFA 4LTYA 4G9JA 2NXFA 4UWQA 1HPUA 3H60A 1S8EA 4WWLA 2HYOA 4I5NC 2NYLC 4I5LC 4KKZA 3IVDA 3H66A 4MP0A 2BCDA 5F3WA 3T1IA 1AUIA 4ORBA 1OIDA 1IT6A 1HO5A 1S3LA 1USHA 1V73A 2IE3C 4H2GA 4TUIA 1HP1A 2BDXA 5HPEA 4UT3A 1U32A 3C5WC 3JYFA 3H68A 2ZBMA 3KBPA 3PSOA 4UT2A 3E7BA 1T70A 3ICFA 4H2FA 4O24A 2R17A 1W24A 3THNA 3DSDA 5JPFA 1Z2WA 3V4YA 3QFNA 4KBPA 4IYPC 3FGAC 1S95A 1KBPA 3C9FA 2Z72A 1SU1A 3IB7A 4J6OA 1JK7A 2A22A 2HYPA 4JA7A 4V0WA 4IL1A 3ZTVA 4DSYA 4ZX2A 1II7A 1XZWA 3N5UA 3PSNA 3K7VC 1FJMA 4B2OA 3QFKA 4FBQA 4JA9A 3RL4A 3RQZA 2YVTA 1S3MA 2QJCA 2BQ8X 2GJUA 2USHA 4MOYA 5J28A 4ZVZA 1UF3A 1OI8A 4LACC 3H61A 2HY1A 2WDDA 4FCXA 3QFOA 4Q7FA 3QG5C 4UT3B 3GVEA 3CK2A 4YKEA 4FBWA 5C1VA 4TUGA 2AHDA 4NZVA 4F0ZA 2JOGA 1QFCA 1Z2XA 5JPEA 4MOVA 3RL3A 3HVQA 3THOB 1WAO1 1QHWA 3IVEA 2O8GA 2XMOA 2P6BA 2WDCA 2WDEA 1XM7A 2NPPC 3H64A 2Q8UA 3P71C 3AUZA 5EQVA 4H1SA 3DSCA 4O4KA 2Z1AA 3IB8A 3K7WC 2DFJA 1M63A 2QFPA 3QFMA 5INBA 4O5GA 4M0VA 4H1YP 3EGHA 3H63A 3AV0A 3H67A 4FBKA 5JJTA 4DHLA 2IE4C 2CV9A 3H62B 2O8AA 5GTUA
chains in the Genus database with same CATH superfamily
1S70A 3E0JA 3EGGA 1T71A 5IOHA 3E7AA 2IAEC 2NYMC 4OR9A 2Z06A 1UTEA 1OIEA 4ORCA 2KKNA 3RL5A 3ZU0A 4H2BA 4V0XA 3H69A 1WARA 1S3NA 4O43A 1TCOA 1MF8A 4XPNA 3TGHA 3DW8C 4V0VA 1G5BA 4ORAA 4H2IA 2QFRA 3LL8A 4HD0A 5DNYA 5B8IA 4DT2A 1NNWA 4LU9A 2WDFA 4LTYA 4G9JA 2NXFA 4UWQA 1HPUA 3H60A 1S8EA 4WWLA 2HYOA 4I5NC 2NYLC 4I5LC 4KKZA 3IVDA 3H66A 2ZO9B 2BCDA 4MP0A 5F3WA 3T1IA 1AUIA 4ORBA 1OIDA 1IT6A 2DXNA 1HO5A 1S3LA 1USHA 1V73A 2IE3C 4H2GA 4TUIA 1HP1A 2BDXA 5HPEA 4UT3A 1U32A 3C5WC 3JYFA 3H68A 2ZBMA 3KBPA 3PSOA 2DXLA 4UT2A 3E7BA 1T70A 3ICFA 4H2FA 4O24A 2R17A 1W24A 3THNA 3DSDA 5JPFA 1Z2WA 3V4YA 3QFNA 4KBPA 4IYPC 3FGAC 1S95A 1KBPA 3C9FA 2Z72A 1SU1A 3IB7A 4J6OA 1JK7A 2A22A 2HYPA 4JA7A 4V0WA 4IL1A 3ZTVA 4DSYA 4ZX2A 1II7A 1XZWA 3N5UA 3PSNA 3K7VC 1FJMA 4B2OA 3QFKA 4FBQA 4JA9A 3RL4A 3RQZA 2YVTA 1S3MA 2QJCA 2BQ8X 2GJUA 2USHA 4MOYA 5J28A 4ZVZA 1UF3A 1OI8A 4LACC 3H61A 2HY1A 2WDDA 4FCXA 3QFOA 4Q7FA 3QG5C 4UT3B 3GVEA 3CK2A 4YKEA 4FBWA 5C1VA 4TUGA 2AHDA 4NZVA 4F0ZA 2JOGA 1QFCA 1Z2XA 5JPEA 4MOVA 3RL3A 3HVQA 3THOB 1WAO1 1QHWA 3FLOA 3IVEA 2O8GA 2XMOA 2P6BA 2WDCA 2WDEA 1XM7A 2NPPC 3H64A 2Q8UA 3P71C 3AUZA 5EQVA 4H1SA 3DSCA 4O4KA 2Z1AA 2YEQA 3IB8A 3K7WC 2DFJA 3D03A 1M63A 2QFPA 3QFMA 5INBA 4O5GA 4M0VA 4H1YP 3EGHA 3H63A 3AV0A 3H67A 4FBKA 5JJTA 4DHLA 2IE4C 2CV9A 2ZOAA 3H62B 2O8AA 5GTUA
chains in the Genus database with same CATH topology
1S70A 3E0JA 3EGGA 1T71A 5IOHA 3E7AA 2IAEC 2NYMC 4OR9A 2Z06A 1UTEA 1OIEA 4ORCA 2KKNA 3RL5A 3ZU0A 4H2BA 4V0XA 3H69A 1WARA 1S3NA 4O43A 1TCOA 1MF8A 4XPNA 3TGHA 3DW8C 4V0VA 1G5BA 4ORAA 4H2IA 2QFRA 3LL8A 4HD0A 5DNYA 5B8IA 4DT2A 1NNWA 4LU9A 2WDFA 4LTYA 4G9JA 2NXFA 4UWQA 1HPUA 3H60A 1S8EA 4WWLA 2HYOA 4I5NC 2NYLC 4I5LC 4KKZA 3IVDA 3H66A 2ZO9B 2BCDA 4MP0A 5F3WA 3T1IA 1AUIA 4ORBA 1OIDA 1IT6A 2DXNA 1HO5A 1S3LA 1USHA 1V73A 2IE3C 4H2GA 4TUIA 1HP1A 2BDXA 5HPEA 4UT3A 1U32A 3C5WC 3JYFA 3H68A 2ZBMA 3KBPA 3PSOA 2DXLA 4UT2A 3E7BA 1T70A 3ICFA 4H2FA 4O24A 2R17A 1W24A 3THNA 3DSDA 5JPFA 1Z2WA 3V4YA 3QFNA 4KBPA 4IYPC 3FGAC 1S95A 1KBPA 3C9FA 2Z72A 1SU1A 3IB7A 4J6OA 1JK7A 2A22A 2HYPA 4JA7A 4V0WA 4IL1A 3ZTVA 4DSYA 4ZX2A 1II7A 1XZWA 3N5UA 3PSNA 3K7VC 1FJMA 4B2OA 3QFKA 4FBQA 4JA9A 3RL4A 3RQZA 2YVTA 1S3MA 2QJCA 2BQ8X 2GJUA 2USHA 4MOYA 5J28A 4ZVZA 1UF3A 1OI8A 4LACC 3H61A 2HY1A 2WDDA 4FCXA 3QFOA 4Q7FA 3QG5C 4UT3B 3GVEA 3CK2A 4YKEA 4FBWA 5C1VA 4TUGA 2AHDA 4NZVA 4F0ZA 2JOGA 1QFCA 1Z2XA 5JPEA 4MOVA 3RL3A 3HVQA 3THOB 1WAO1 1QHWA 3FLOA 3IVEA 2O8GA 2XMOA 2P6BA 2WDCA 2WDEA 1XM7A 2NPPC 3H64A 2Q8UA 3P71C 3AUZA 5EQVA 4H1SA 3DSCA 4O4KA 2Z1AA 2YEQA 3IB8A 3K7WC 2DFJA 3D03A 1M63A 2QFPA 3QFMA 5INBA 4O5GA 4M0VA 4H1YP 3EGHA 3H63A 3AV0A 3H67A 4FBKA 5JJTA 4DHLA 2IE4C 2CV9A 2ZOAA 3H62B 2O8AA 5GTUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1S70 A;  3EGG A;  1T71 A;  5IOH A;  3E7A A;  2IAE C;  2NYM C;  4OR9 A;  2Z06 A;  1UTE A;  1OIE A;  4ORC A;  2KKN A;  3RL5 A;  3ZU0 A;  4H2B A;  4V0X A;  3H69 A;  1WAR A;  1S3N A;  4O43 A;  1TCO A;  1MF8 A;  4XPN A;  3TGH A;  3DW8 C;  4V0V A;  1G5B A;  4ORA A;  4H2I A;  2QFR A;  3LL8 A;  4HD0 A;  5DNY A;  5B8I A;  4DT2 A;  1NNW A;  4LU9 A;  2WDF A;  4LTY A;  4G9J A;  2NXF A;  4UWQ A;  1HPU A;  3H60 A;  1S8E A;  4WWL A;  2HYO A;  4I5N C;  2NYL C;  4I5L C;  4KKZ A;  3IVD A;  3H66 A;  4MP0 A;  2BCD A;  5F3W A;  3T1I A;  1AUI A;  4ORB A;  1OID A;  1IT6 A;  1HO5 A;  1S3L A;  1USH A;  1V73 A;  2IE3 C;  4H2G A;  4TUI A;  1HP1 A;  2BDX A;  5HPE A;  4UT3 A;  1U32 A;  3C5W C;  3JYF A;  3H68 A;  2ZBM A;  3KBP A;  3PSO A;  4UT2 A;  3E7B A;  1T70 A;  3ICF A;  4H2F A;  4O24 A;  2R17 A;  1W24 A;  3THN A;  3DSD A;  5JPF A;  1Z2W A;  3V4Y A;  3QFN A;  4KBP A;  4IYP C;  3FGA C;  1S95 A;  1KBP A;  3C9F A;  2Z72 A;  1SU1 A;  3IB7 A;  4J6O A;  1JK7 A;  2A22 A;  2HYP A;  4JA7 A;  4V0W A;  4IL1 A;  3ZTV A;  4DSY A;  4ZX2 A;  1II7 A;  1XZW A;  3N5U A;  3PSN A;  3K7V C;  1FJM A;  4B2O A;  3QFK A;  4FBQ A;  4JA9 A;  3RL4 A;  3RQZ A;  2YVT A;  1S3M A;  2QJC A;  2BQ8 X;  2GJU A;  2USH A;  4MOY A;  5J28 A;  4ZVZ A;  1UF3 A;  1OI8 A;  4LAC C;  3H61 A;  2HY1 A;  2WDD A;  4FCX A;  3QFO A;  4Q7F A;  3QG5 C;  4UT3 B;  3GVE A;  3CK2 A;  4YKE A;  4FBW A;  5C1V A;  4TUG A;  2AHD A;  4NZV A;  4F0Z A;  2JOG A;  1QFC A;  1Z2X A;  5JPE A;  4MOV A;  3RL3 A;  3HVQ A;  3THO B;  1WAO 1;  1QHW A;  3IVE A;  2O8G A;  2XMO A;  2P6B A;  2WDC A;  2WDE A;  1XM7 A;  2NPP C;  3H64 A;  2Q8U A;  3P71 C;  3AUZ A;  5EQV A;  4H1S A;  3DSC A;  4O4K A;  2Z1A A;  3IB8 A;  3K7W C;  2DFJ A;  1M63 A;  2QFP A;  3QFM A;  5INB A;  4O5G A;  4M0V A;  4H1Y P;  3EGH A;  3H63 A;  3AV0 A;  3H67 A;  4FBK A;  5JJT A;  4DHL A;  2IE4 C;  2CV9 A;  3H62 B;  2O8A A;  5GTU A; 
#chains in the Genus database with same CATH topology
 1S70 A;  3E0J A;  3EGG A;  1T71 A;  5IOH A;  3E7A A;  2IAE C;  2NYM C;  4OR9 A;  2Z06 A;  1UTE A;  1OIE A;  4ORC A;  2KKN A;  3RL5 A;  3ZU0 A;  4H2B A;  4V0X A;  3H69 A;  1WAR A;  1S3N A;  4O43 A;  1TCO A;  1MF8 A;  4XPN A;  3TGH A;  3DW8 C;  4V0V A;  1G5B A;  4ORA A;  4H2I A;  2QFR A;  3LL8 A;  4HD0 A;  5DNY A;  5B8I A;  4DT2 A;  1NNW A;  4LU9 A;  2WDF A;  4LTY A;  4G9J A;  2NXF A;  4UWQ A;  1HPU A;  3H60 A;  1S8E A;  4WWL A;  2HYO A;  4I5N C;  2NYL C;  4I5L C;  4KKZ A;  3IVD A;  3H66 A;  2ZO9 B;  2BCD A;  4MP0 A;  5F3W A;  3T1I A;  1AUI A;  4ORB A;  1OID A;  1IT6 A;  2DXN A;  1HO5 A;  1S3L A;  1USH A;  1V73 A;  2IE3 C;  4H2G A;  4TUI A;  1HP1 A;  2BDX A;  5HPE A;  4UT3 A;  1U32 A;  3C5W C;  3JYF A;  3H68 A;  2ZBM A;  3KBP A;  3PSO A;  2DXL A;  4UT2 A;  3E7B A;  1T70 A;  3ICF A;  4H2F A;  4O24 A;  2R17 A;  1W24 A;  3THN A;  3DSD A;  5JPF A;  1Z2W A;  3V4Y A;  3QFN A;  4KBP A;  4IYP C;  3FGA C;  1S95 A;  1KBP A;  3C9F A;  2Z72 A;  1SU1 A;  3IB7 A;  4J6O A;  1JK7 A;  2A22 A;  2HYP A;  4JA7 A;  4V0W A;  4IL1 A;  3ZTV A;  4DSY A;  4ZX2 A;  1II7 A;  1XZW A;  3N5U A;  3PSN A;  3K7V C;  1FJM A;  4B2O A;  3QFK A;  4FBQ A;  4JA9 A;  3RL4 A;  3RQZ A;  2YVT A;  1S3M A;  2QJC A;  2BQ8 X;  2GJU A;  2USH A;  4MOY A;  5J28 A;  4ZVZ A;  1UF3 A;  1OI8 A;  4LAC C;  3H61 A;  2HY1 A;  2WDD A;  4FCX A;  3QFO A;  4Q7F A;  3QG5 C;  4UT3 B;  3GVE A;  3CK2 A;  4YKE A;  4FBW A;  5C1V A;  4TUG A;  2AHD A;  4NZV A;  4F0Z A;  2JOG A;  1QFC A;  1Z2X A;  5JPE A;  4MOV A;  3RL3 A;  3HVQ A;  3THO B;  1WAO 1;  1QHW A;  3FLO A;  3IVE A;  2O8G A;  2XMO A;  2P6B A;  2WDC A;  2WDE A;  1XM7 A;  2NPP C;  3H64 A;  2Q8U A;  3P71 C;  3AUZ A;  5EQV A;  4H1S A;  3DSC A;  4O4K A;  2Z1A A;  2YEQ A;  3IB8 A;  3K7W C;  2DFJ A;  3D03 A;  1M63 A;  2QFP A;  3QFM A;  5INB A;  4O5G A;  4M0V A;  4H1Y P;  3EGH A;  3H63 A;  3AV0 A;  3H67 A;  4FBK A;  5JJT A;  4DHL A;  2IE4 C;  2CV9 A;  2ZOA A;  3H62 B;  2O8A A;  5GTU A; 
#chains in the Genus database with same CATH homology
 1S70 A;  3E0J A;  3EGG A;  1T71 A;  5IOH A;  3E7A A;  2IAE C;  2NYM C;  4OR9 A;  2Z06 A;  1UTE A;  1OIE A;  4ORC A;  2KKN A;  3RL5 A;  3ZU0 A;  4H2B A;  4V0X A;  3H69 A;  1WAR A;  1S3N A;  4O43 A;  1TCO A;  1MF8 A;  4XPN A;  3TGH A;  3DW8 C;  4V0V A;  1G5B A;  4ORA A;  4H2I A;  2QFR A;  3LL8 A;  4HD0 A;  5DNY A;  5B8I A;  4DT2 A;  1NNW A;  4LU9 A;  2WDF A;  4LTY A;  4G9J A;  2NXF A;  4UWQ A;  1HPU A;  3H60 A;  1S8E A;  4WWL A;  2HYO A;  4I5N C;  2NYL C;  4I5L C;  4KKZ A;  3IVD A;  3H66 A;  2ZO9 B;  2BCD A;  4MP0 A;  5F3W A;  3T1I A;  1AUI A;  4ORB A;  1OID A;  1IT6 A;  2DXN A;  1HO5 A;  1S3L A;  1USH A;  1V73 A;  2IE3 C;  4H2G A;  4TUI A;  1HP1 A;  2BDX A;  5HPE A;  4UT3 A;  1U32 A;  3C5W C;  3JYF A;  3H68 A;  2ZBM A;  3KBP A;  3PSO A;  2DXL A;  4UT2 A;  3E7B A;  1T70 A;  3ICF A;  4H2F A;  4O24 A;  2R17 A;  1W24 A;  3THN A;  3DSD A;  5JPF A;  1Z2W A;  3V4Y A;  3QFN A;  4KBP A;  4IYP C;  3FGA C;  1S95 A;  1KBP A;  3C9F A;  2Z72 A;  1SU1 A;  3IB7 A;  4J6O A;  1JK7 A;  2A22 A;  2HYP A;  4JA7 A;  4V0W A;  4IL1 A;  3ZTV A;  4DSY A;  4ZX2 A;  1II7 A;  1XZW A;  3N5U A;  3PSN A;  3K7V C;  1FJM A;  4B2O A;  3QFK A;  4FBQ A;  4JA9 A;  3RL4 A;  3RQZ A;  2YVT A;  1S3M A;  2QJC A;  2BQ8 X;  2GJU A;  2USH A;  4MOY A;  5J28 A;  4ZVZ A;  1UF3 A;  1OI8 A;  4LAC C;  3H61 A;  2HY1 A;  2WDD A;  4FCX A;  3QFO A;  4Q7F A;  3QG5 C;  4UT3 B;  3GVE A;  3CK2 A;  4YKE A;  4FBW A;  5C1V A;  4TUG A;  2AHD A;  4NZV A;  4F0Z A;  2JOG A;  1QFC A;  1Z2X A;  5JPE A;  4MOV A;  3RL3 A;  3HVQ A;  3THO B;  1WAO 1;  1QHW A;  3FLO A;  3IVE A;  2O8G A;  2XMO A;  2P6B A;  2WDC A;  2WDE A;  1XM7 A;  2NPP C;  3H64 A;  2Q8U A;  3P71 C;  3AUZ A;  5EQV A;  4H1S A;  3DSC A;  4O4K A;  2Z1A A;  2YEQ A;  3IB8 A;  3K7W C;  2DFJ A;  3D03 A;  1M63 A;  2QFP A;  3QFM A;  5INB A;  4O5G A;  4M0V A;  4H1Y P;  3EGH A;  3H63 A;  3AV0 A;  3H67 A;  4FBK A;  5JJT A;  4DHL A;  2IE4 C;  2CV9 A;  2ZOA A;  3H62 B;  2O8A A;  5GTU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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