1UX2A

X-ray structure of acetylcholine binding protein (achbp)
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
207
structure length
207
Chain Sequence
VEFDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Nicotine and Carbamylcholine Binding to Nicotinic Acetylcholine Receptors as Studied in Achbp Crystal Structures
pubmed doi rcsb
molecule tags Glycoprotein
source organism Lymnaea stagnalis
molecule keywords ACETYLCHOLINE BINDING PROTEIN
total genus 51
structure length 207
sequence length 207
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2004-02-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 1ux2A00
5KE4A 3RIFA 2X00D 4D01A 4ILCA 3UUBA 3U8LA 4FRRA 4LMLA 4ZRUA 3U8JA 4LMKA 3UU8A 2BG9A 2ZJUA 2WN9A 3JAEA 5CO5A 3U8NA 1UX2A 2W8FA 3JAFA 5L4HA 2Y57A 3ZDGA 5HEJA 5J0ZA 2XQ3A 5HEHA 4UM1A 3RHWA 4ZZBA 2XQ4A 2BYSA 4TWHA 3LSVA 4X5TA 3EI0A 5HEOA 3UQ4A 5LG3A 3C84A 2PGZA 3T4MA 4IL4A 4ZZCA 2Y54A 5HEGA 5BP0A 2BYNA 2UZ6A 5J5HA 2BR8A 3JADA 3GUAA 4IL9A 4COFA 2XYSA 2XZ6A 4IREA 4TWDA 1UV6A 4BFQA 4ZJSA 2Y58A 4TWFA 4QH4A 4ZK1A 2BYRA 5FJVA 4HFEA 3UU4A 5AFMB 2XZ5A 5SYOA 3ZDHA 5J5GA 4BQTA 3U8MA 4HFHA 4AFGA 3P50A 1I9BA 4EZ1A 4UM3A 3P4WA 3EHZA 4UM3P 3C79A 4QH1A 2XYTA 3WTLA 2X00A 4UXUA 4B5DA 4HFIA 4HFBA 3WTNA 2WNJA 2XNUA 4ZK4A 3WTOA 5BW2A 2PH9A 5CFBA 4XK9A 5J5FA 2ZJVA 4ALXA 3TLTA 2BYQA 3WIPA 3ZKRA 4DBMA 2Y56A 4NZBA 4AFTA 5BRXA 1UW6A 2WNCA 2BG9C 3TLVA 3UU3A 5JMEA 5IUXA 3UU5A 2WZYA 2BJ0A 2XQ7A 2Y7YA 4ILAA 3WTIA 4HQPA 3IGQA 4QABA 3SQ9A 3WTHA 4ZJTA 4LMJA 2XQAA 4TNWA 4UM3S 4Z90A 2BR7A 5HCMA 5HEUA 4XHEA 5TVCA 3RI5A 2C9TA 5AFJA 4AFHA 4NPPA 4ZR6A 2BG9B 4QAAA 2VL0A 5AFLA 5HCJA 2XQ9A 5KZUA 3RQUA 2W8GA 2XQ6A 2YN6A 2XNTA 3UU6A 4A97A 3SQ6A 4TNVA 5AFKA 2YMDA 4F8HA 2YKSA 4WV9A 5L47A 5AFNA 3TLWA 4A98A 2XQ8A 3PEOA 2XQ5A 4QACA 4UY2A 3RQWA 2WNLA 4QH5A 2QC1B 2YOEA 2BG9E 4ILBA 3SH1A 2BYPA 3WTJA 4PIRA 2YMEA 5AFMA 3U8KA 4HFDA 4HFCA 5LXBA 3TLUA 3EAMA 3UQ7A 3PMZA 3RIAA 3WTMA 5J5IA 3SIOA 5AFHA 5AINA 3TLSA 5L4EA 4Z91A 3WTKA 2XNVA
chains in the Genus database with same CATH superfamily
5KE4A 3RIFA 2X00D 4D01A 4ILCA 3UUBA 3U8LA 4FRRA 4LMLA 4ZRUA 3U8JA 4LMKA 3UU8A 2BG9A 2ZJUA 2WN9A 3JAEA 5CO5A 3U8NA 1UX2A 2W8FA 3JAFA 5L4HA 2Y57A 3ZDGA 5HEJA 5J0ZA 2XQ3A 5HEHA 4UM1A 3RHWA 4ZZBA 2XQ4A 2BYSA 4TWHA 3LSVA 4X5TA 3EI0A 5HEOA 3UQ4A 5LG3A 3C84A 2PGZA 3T4MA 4IL4A 4ZZCA 2Y54A 5HEGA 5BP0A 2BYNA 2UZ6A 5J5HA 2BR8A 3JADA 3GUAA 4IL9A 4COFA 2XYSA 2XZ6A 4IREA 4TWDA 1UV6A 4BFQA 4ZJSA 2Y58A 4TWFA 4QH4A 4ZK1A 2BYRA 5FJVA 4HFEA 3UU4A 5AFMB 2XZ5A 5SYOA 3ZDHA 5J5GA 4BQTA 3U8MA 4HFHA 4AFGA 3P50A 1I9BA 4EZ1A 4UM3A 3P4WA 3EHZA 4UM3P 3C79A 4QH1A 2XYTA 3WTLA 2X00A 4UXUA 4B5DA 4HFIA 4HFBA 3WTNA 2WNJA 2XNUA 4ZK4A 3WTOA 5BW2A 2PH9A 5CFBA 4XK9A 5J5FA 2ZJVA 4ALXA 3TLTA 2BYQA 3WIPA 3ZKRA 4DBMA 2Y56A 4NZBA 4AFTA 5BRXA 1UW6A 2WNCA 2BG9C 3TLVA 3UU3A 5JMEA 5IUXA 3UU5A 2WZYA 2BJ0A 2XQ7A 2Y7YA 4ILAA 3WTIA 4HQPA 3IGQA 4QABA 3SQ9A 3WTHA 4ZJTA 4LMJA 2XQAA 4TNWA 4UM3S 4Z90A 2BR7A 5HCMA 5HEUA 4XHEA 5TVCA 3RI5A 2C9TA 5AFJA 4AFHA 4NPPA 4ZR6A 2BG9B 4QAAA 2VL0A 5AFLA 5HCJA 2XQ9A 5KZUA 3RQUA 2W8GA 2XQ6A 2YN6A 2XNTA 3UU6A 4A97A 3SQ6A 4TNVA 5AFKA 2YMDA 4F8HA 2YKSA 4WV9A 5L47A 5AFNA 3TLWA 4A98A 2XQ8A 3PEOA 2XQ5A 4QACA 4UY2A 3RQWA 2WNLA 4QH5A 2QC1B 2YOEA 2BG9E 4ILBA 3SH1A 2BYPA 3WTJA 4PIRA 2YMEA 5AFMA 3U8KA 4HFDA 4HFCA 5LXBA 3TLUA 3EAMA 3UQ7A 3PMZA 3RIAA 3WTMA 5J5IA 3SIOA 5AFHA 5AINA 3TLSA 5L4EA 4Z91A 3WTKA 2XNVA
chains in the Genus database with same CATH topology
5KE4A 3RIFA 2X00D 4D01A 4ILCA 3UUBA 3U8LA 4FRRA 4LMLA 4ZRUA 3U8JA 4LMKA 3UU8A 2BG9A 2ZJUA 2WN9A 3JAEA 5CO5A 3U8NA 1UX2A 2W8FA 3JAFA 5L4HA 2Y57A 3ZDGA 5HEJA 5J0ZA 2XQ3A 5HEHA 4UM1A 3RHWA 4ZZBA 2XQ4A 2BYSA 4TWHA 3LSVA 4X5TA 3EI0A 5HEOA 3UQ4A 5LG3A 3C84A 2PGZA 3T4MA 4IL4A 4ZZCA 2Y54A 5HEGA 5BP0A 2BYNA 2UZ6A 5J5HA 2BR8A 3JADA 3GUAA 4IL9A 4COFA 2XYSA 2XZ6A 4IREA 4TWDA 1UV6A 4BFQA 4ZJSA 2Y58A 4TWFA 4QH4A 4ZK1A 2BYRA 5FJVA 4HFEA 3UU4A 5AFMB 2XZ5A 5SYOA 3ZDHA 5J5GA 4BQTA 3U8MA 4HFHA 4AFGA 3P50A 1I9BA 4EZ1A 4UM3A 3P4WA 3EHZA 4UM3P 3C79A 4QH1A 2XYTA 3WTLA 2X00A 4UXUA 4B5DA 4HFIA 4HFBA 3WTNA 2WNJA 2XNUA 4ZK4A 3WTOA 5BW2A 2PH9A 5CFBA 4XK9A 5J5FA 2ZJVA 4ALXA 3TLTA 2BYQA 3WIPA 3ZKRA 4DBMA 2Y56A 4NZBA 4AFTA 5BRXA 1UW6A 2WNCA 2BG9C 3TLVA 3UU3A 5JMEA 5IUXA 3UU5A 2WZYA 2BJ0A 2XQ7A 2Y7YA 4ILAA 3WTIA 4HQPA 3IGQA 4QABA 3SQ9A 3WTHA 4ZJTA 4LMJA 2XQAA 4TNWA 4UM3S 4Z90A 2BR7A 5HCMA 5HEUA 4XHEA 5TVCA 3RI5A 2C9TA 5AFJA 4AFHA 4NPPA 4ZR6A 2BG9B 4QAAA 2VL0A 5AFLA 5HCJA 2XQ9A 5KZUA 3RQUA 2W8GA 2XQ6A 2YN6A 2XNTA 3UU6A 4A97A 3SQ6A 4TNVA 5AFKA 2YMDA 4F8HA 2YKSA 4WV9A 5L47A 5AFNA 3TLWA 4A98A 2XQ8A 3PEOA 2XQ5A 4QACA 4UY2A 3RQWA 2WNLA 4QH5A 2QC1B 2YOEA 2BG9E 4ILBA 3SH1A 2BYPA 3WTJA 4PIRA 2YMEA 5AFMA 3U8KA 4HFDA 4HFCA 5LXBA 3TLUA 3EAMA 3UQ7A 3PMZA 3RIAA 3WTMA 5J5IA 3SIOA 5AFHA 5AINA 3TLSA 5L4EA 4Z91A 3WTKA 2XNVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KE4 A;  3RIF A;  2X00 D;  4D01 A;  4ILC A;  3UUB A;  3U8L A;  4FRR A;  4LML A;  4ZRU A;  3U8J A;  4LMK A;  3UU8 A;  2BG9 A;  2ZJU A;  2WN9 A;  3JAE A;  5CO5 A;  3U8N A;  1UX2 A;  2W8F A;  3JAF A;  5L4H A;  2Y57 A;  3ZDG A;  5HEJ A;  5J0Z A;  2XQ3 A;  5HEH A;  4UM1 A;  3RHW A;  4ZZB A;  2XQ4 A;  2BYS A;  4TWH A;  3LSV A;  4X5T A;  3EI0 A;  5HEO A;  3UQ4 A;  5LG3 A;  3C84 A;  2PGZ A;  3T4M A;  4IL4 A;  4ZZC A;  2Y54 A;  5HEG A;  5BP0 A;  2BYN A;  2UZ6 A;  5J5H A;  2BR8 A;  3JAD A;  3GUA A;  4IL9 A;  4COF A;  2XYS A;  2XZ6 A;  4IRE A;  4TWD A;  1UV6 A;  4BFQ A;  4ZJS A;  2Y58 A;  4TWF A;  4QH4 A;  4ZK1 A;  2BYR A;  5FJV A;  4HFE A;  3UU4 A;  5AFM B;  2XZ5 A;  5SYO A;  3ZDH A;  5J5G A;  4BQT A;  3U8M A;  4HFH A;  4AFG A;  3P50 A;  1I9B A;  4EZ1 A;  4UM3 A;  3P4W A;  3EHZ A;  4UM3 P;  3C79 A;  4QH1 A;  2XYT A;  3WTL A;  2X00 A;  4UXU A;  4B5D A;  4HFI A;  4HFB A;  3WTN A;  2WNJ A;  2XNU A;  4ZK4 A;  3WTO A;  5BW2 A;  2PH9 A;  5CFB A;  4XK9 A;  5J5F A;  2ZJV A;  4ALX A;  3TLT A;  2BYQ A;  3WIP A;  3ZKR A;  4DBM A;  2Y56 A;  4NZB A;  4AFT A;  5BRX A;  1UW6 A;  2WNC A;  2BG9 C;  3TLV A;  3UU3 A;  5JME A;  5IUX A;  3UU5 A;  2WZY A;  2BJ0 A;  2XQ7 A;  2Y7Y A;  4ILA A;  3WTI A;  4HQP A;  3IGQ A;  4QAB A;  3SQ9 A;  3WTH A;  4ZJT A;  4LMJ A;  2XQA A;  4TNW A;  4UM3 S;  4Z90 A;  2BR7 A;  5HCM A;  5HEU A;  4XHE A;  5TVC A;  3RI5 A;  2C9T A;  5AFJ A;  4AFH A;  4NPP A;  4ZR6 A;  2BG9 B;  4QAA A;  2VL0 A;  5AFL A;  5HCJ A;  2XQ9 A;  5KZU A;  3RQU A;  2W8G A;  2XQ6 A;  2YN6 A;  2XNT A;  3UU6 A;  4A97 A;  3SQ6 A;  4TNV A;  5AFK A;  2YMD A;  4F8H A;  2YKS A;  4WV9 A;  5L47 A;  5AFN A;  3TLW A;  4A98 A;  2XQ8 A;  3PEO A;  2XQ5 A;  4QAC A;  4UY2 A;  3RQW A;  2WNL A;  4QH5 A;  2QC1 B;  2YOE A;  2BG9 E;  4ILB A;  3SH1 A;  2BYP A;  3WTJ A;  4PIR A;  2YME A;  5AFM A;  3U8K A;  4HFD A;  4HFC A;  5LXB A;  3TLU A;  3EAM A;  3UQ7 A;  3PMZ A;  3RIA A;  3WTM A;  5J5I A;  3SIO A;  5AFH A;  5AIN A;  3TLS A;  5L4E A;  4Z91 A;  3WTK A;  2XNV A; 
#chains in the Genus database with same CATH topology
 5KE4 A;  3RIF A;  2X00 D;  4D01 A;  4ILC A;  3UUB A;  3U8L A;  4FRR A;  4LML A;  4ZRU A;  3U8J A;  4LMK A;  3UU8 A;  2BG9 A;  2ZJU A;  2WN9 A;  3JAE A;  5CO5 A;  3U8N A;  1UX2 A;  2W8F A;  3JAF A;  5L4H A;  2Y57 A;  3ZDG A;  5HEJ A;  5J0Z A;  2XQ3 A;  5HEH A;  4UM1 A;  3RHW A;  4ZZB A;  2XQ4 A;  2BYS A;  4TWH A;  3LSV A;  4X5T A;  3EI0 A;  5HEO A;  3UQ4 A;  5LG3 A;  3C84 A;  2PGZ A;  3T4M A;  4IL4 A;  4ZZC A;  2Y54 A;  5HEG A;  5BP0 A;  2BYN A;  2UZ6 A;  5J5H A;  2BR8 A;  3JAD A;  3GUA A;  4IL9 A;  4COF A;  2XYS A;  2XZ6 A;  4IRE A;  4TWD A;  1UV6 A;  4BFQ A;  4ZJS A;  2Y58 A;  4TWF A;  4QH4 A;  4ZK1 A;  2BYR A;  5FJV A;  4HFE A;  3UU4 A;  5AFM B;  2XZ5 A;  5SYO A;  3ZDH A;  5J5G A;  4BQT A;  3U8M A;  4HFH A;  4AFG A;  3P50 A;  1I9B A;  4EZ1 A;  4UM3 A;  3P4W A;  3EHZ A;  4UM3 P;  3C79 A;  4QH1 A;  2XYT A;  3WTL A;  2X00 A;  4UXU A;  4B5D A;  4HFI A;  4HFB A;  3WTN A;  2WNJ A;  2XNU A;  4ZK4 A;  3WTO A;  5BW2 A;  2PH9 A;  5CFB A;  4XK9 A;  5J5F A;  2ZJV A;  4ALX A;  3TLT A;  2BYQ A;  3WIP A;  3ZKR A;  4DBM A;  2Y56 A;  4NZB A;  4AFT A;  5BRX A;  1UW6 A;  2WNC A;  2BG9 C;  3TLV A;  3UU3 A;  5JME A;  5IUX A;  3UU5 A;  2WZY A;  2BJ0 A;  2XQ7 A;  2Y7Y A;  4ILA A;  3WTI A;  4HQP A;  3IGQ A;  4QAB A;  3SQ9 A;  3WTH A;  4ZJT A;  4LMJ A;  2XQA A;  4TNW A;  4UM3 S;  4Z90 A;  2BR7 A;  5HCM A;  5HEU A;  4XHE A;  5TVC A;  3RI5 A;  2C9T A;  5AFJ A;  4AFH A;  4NPP A;  4ZR6 A;  2BG9 B;  4QAA A;  2VL0 A;  5AFL A;  5HCJ A;  2XQ9 A;  5KZU A;  3RQU A;  2W8G A;  2XQ6 A;  2YN6 A;  2XNT A;  3UU6 A;  4A97 A;  3SQ6 A;  4TNV A;  5AFK A;  2YMD A;  4F8H A;  2YKS A;  4WV9 A;  5L47 A;  5AFN A;  3TLW A;  4A98 A;  2XQ8 A;  3PEO A;  2XQ5 A;  4QAC A;  4UY2 A;  3RQW A;  2WNL A;  4QH5 A;  2QC1 B;  2YOE A;  2BG9 E;  4ILB A;  3SH1 A;  2BYP A;  3WTJ A;  4PIR A;  2YME A;  5AFM A;  3U8K A;  4HFD A;  4HFC A;  5LXB A;  3TLU A;  3EAM A;  3UQ7 A;  3PMZ A;  3RIA A;  3WTM A;  5J5I A;  3SIO A;  5AFH A;  5AIN A;  3TLS A;  5L4E A;  4Z91 A;  3WTK A;  2XNV A; 
#chains in the Genus database with same CATH homology
 5KE4 A;  3RIF A;  2X00 D;  4D01 A;  4ILC A;  3UUB A;  3U8L A;  4FRR A;  4LML A;  4ZRU A;  3U8J A;  4LMK A;  3UU8 A;  2BG9 A;  2ZJU A;  2WN9 A;  3JAE A;  5CO5 A;  3U8N A;  1UX2 A;  2W8F A;  3JAF A;  5L4H A;  2Y57 A;  3ZDG A;  5HEJ A;  5J0Z A;  2XQ3 A;  5HEH A;  4UM1 A;  3RHW A;  4ZZB A;  2XQ4 A;  2BYS A;  4TWH A;  3LSV A;  4X5T A;  3EI0 A;  5HEO A;  3UQ4 A;  5LG3 A;  3C84 A;  2PGZ A;  3T4M A;  4IL4 A;  4ZZC A;  2Y54 A;  5HEG A;  5BP0 A;  2BYN A;  2UZ6 A;  5J5H A;  2BR8 A;  3JAD A;  3GUA A;  4IL9 A;  4COF A;  2XYS A;  2XZ6 A;  4IRE A;  4TWD A;  1UV6 A;  4BFQ A;  4ZJS A;  2Y58 A;  4TWF A;  4QH4 A;  4ZK1 A;  2BYR A;  5FJV A;  4HFE A;  3UU4 A;  5AFM B;  2XZ5 A;  5SYO A;  3ZDH A;  5J5G A;  4BQT A;  3U8M A;  4HFH A;  4AFG A;  3P50 A;  1I9B A;  4EZ1 A;  4UM3 A;  3P4W A;  3EHZ A;  4UM3 P;  3C79 A;  4QH1 A;  2XYT A;  3WTL A;  2X00 A;  4UXU A;  4B5D A;  4HFI A;  4HFB A;  3WTN A;  2WNJ A;  2XNU A;  4ZK4 A;  3WTO A;  5BW2 A;  2PH9 A;  5CFB A;  4XK9 A;  5J5F A;  2ZJV A;  4ALX A;  3TLT A;  2BYQ A;  3WIP A;  3ZKR A;  4DBM A;  2Y56 A;  4NZB A;  4AFT A;  5BRX A;  1UW6 A;  2WNC A;  2BG9 C;  3TLV A;  3UU3 A;  5JME A;  5IUX A;  3UU5 A;  2WZY A;  2BJ0 A;  2XQ7 A;  2Y7Y A;  4ILA A;  3WTI A;  4HQP A;  3IGQ A;  4QAB A;  3SQ9 A;  3WTH A;  4ZJT A;  4LMJ A;  2XQA A;  4TNW A;  4UM3 S;  4Z90 A;  2BR7 A;  5HCM A;  5HEU A;  4XHE A;  5TVC A;  3RI5 A;  2C9T A;  5AFJ A;  4AFH A;  4NPP A;  4ZR6 A;  2BG9 B;  4QAA A;  2VL0 A;  5AFL A;  5HCJ A;  2XQ9 A;  5KZU A;  3RQU A;  2W8G A;  2XQ6 A;  2YN6 A;  2XNT A;  3UU6 A;  4A97 A;  3SQ6 A;  4TNV A;  5AFK A;  2YMD A;  4F8H A;  2YKS A;  4WV9 A;  5L47 A;  5AFN A;  3TLW A;  4A98 A;  2XQ8 A;  3PEO A;  2XQ5 A;  4QAC A;  4UY2 A;  3RQW A;  2WNL A;  4QH5 A;  2QC1 B;  2YOE A;  2BG9 E;  4ILB A;  3SH1 A;  2BYP A;  3WTJ A;  4PIR A;  2YME A;  5AFM A;  3U8K A;  4HFD A;  4HFC A;  5LXB A;  3TLU A;  3EAM A;  3UQ7 A;  3PMZ A;  3RIA A;  3WTM A;  5J5I A;  3SIO A;  5AFH A;  5AIN A;  3TLS A;  5L4E A;  4Z91 A;  3WTK A;  2XNV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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