2XZ5A

Mmts-modified y53c mutant of aplysia achbp in complex with acetylcholine
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
207
structure length
206
Chain Sequence
b'QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERRA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of a Cysteine-Modified Mutant in Loop D of Acetylcholine Binding Protein
pubmed doi rcsb
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
source organism Aplysia californica
molecule tags Receptor
total genus 48
structure length 206
sequence length 207
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2010-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2xz5A00
2XQAA 3WTLA 3U8LA 4AFGA 4DBMA 4ALXA 5KZUA 3JAFA 5HCMA 2WNCA 4QH4A 4ZZCA 5AFMB 4F8HA 3TLUA 2XQ8A 5HEGA 4WV9A 4TWFA 5LXBA 4LMJA 3UUBA 4A97A 5FJVA 4ZZBA 4XK9A 3UQ7A 2YMEA 5HEJA 4B5DA 5AFLA 5JMEA 2BYSA 5HEHA 4QH1A 3U8JA 3UU3A 3WTOA 3ZDHA 2ZJUA 4HFIA 4LMLA 2C9TA 3RQWA 1UX2A 2ZJVA 4UY2A 2BG9C 5AINA 4UXUA 2Y58A 5AFJA 3WTKA 2XNUA 4HQPA 2BYPA 3UU5A 4QACA 4HFDA 5LG3A 3RIFA 5BRXA 2WZYA 4TWDA 2Y7YA 4ZR6A 4IREA 4ZRUA 4A98A 5J0ZA 2YMDA 3RQUA 5J5IA 3U8KA 2BR8A 2W8FA 2VL0A 3JADA 2BYRA 3RIAA 5BP0A 4XHEA 4UM3S 3WTIA 3C84A 3WTNA 5AFNA 2BG9E 5HEUA 5J5GA 4AFHA 2XYSA 3P4WA 3WTMA 4AFTA 2W8GA 5CO5A 3IGQA 2YKSA 2WN9A 4Z91A 2XQ4A 2XZ5A 2Y56A 4BFQA 4ZK4A 3TLSA 3UU6A 2Y57A 2Y54A 3EI0A 2X00A 5HCJA 4ZJSA 2X00D 4QH5A 3SQ6A 2XQ7A 4HFBA 5TVCA 1UW6A 5IUXA 4ZK1A 2WNJA 3PMZA 2XZ6A 3C79A 5HEOA 5KE4A 4ILBA 3P50A 3RHWA 4Z90A 3T4MA 2BJ0A 2XNTA 4UM1A 1UV6A 4X5TA 5CFBA 4IL4A 2BR7A 4NPPA 4ZJTA 2YOEA 2BYQA 2BYNA 3U8NA 4UM3A 2XNVA 4QAAA 3TLVA 2XQ9A 3UQ4A 5J5HA 2XQ5A 4TNVA 3ZKRA 4COFA 2XQ3A 4NZBA 3TLWA 4BQTA 4HFHA 4QABA 4IL9A 3SH1A 3EHZA 3UU8A 1I9BA 3WIPA 5AFKA 5L47A 4HFCA 5AFHA 3PEOA 3TLTA 3EAMA 2PGZA 3LSVA 5BW2A 3WTHA 3SIOA 2XQ6A 3RI5A 4HFEA 4ILCA 2BG9B 2UZ6A 4LMKA 4D01A 5J5FA 3ZDGA 3JAEA 4EZ1A 5AFMA 4FRRA 4UM3P 4PIRA 3UU4A 4TWHA 3GUAA 3SQ9A 2YN6A 5L4HA 4ILAA 2QC1B 2BG9A 4TNWA 3WTJA 5L4EA 2WNLA 2XYTA 2PH9A 5SYOA 3U8MA
chains in the Genus database with same CATH superfamily
2XQAA 3WTLA 3U8LA 4AFGA 4DBMA 4ALXA 5KZUA 3JAFA 5HCMA 2WNCA 4QH4A 4ZZCA 5AFMB 4F8HA 3TLUA 2XQ8A 5HEGA 4WV9A 4TWFA 5LXBA 4LMJA 3UUBA 4A97A 5FJVA 4ZZBA 4XK9A 3UQ7A 2YMEA 5HEJA 4B5DA 5AFLA 5JMEA 2BYSA 5HEHA 4QH1A 3U8JA 3UU3A 3WTOA 3ZDHA 2ZJUA 4HFIA 4LMLA 2C9TA 3RQWA 1UX2A 2ZJVA 4UY2A 2BG9C 5AINA 4UXUA 2Y58A 5AFJA 3WTKA 2XNUA 4HQPA 2BYPA 3UU5A 4QACA 4HFDA 5LG3A 3RIFA 5BRXA 2WZYA 4TWDA 2Y7YA 4ZR6A 4IREA 4ZRUA 4A98A 5J0ZA 2YMDA 3RQUA 5J5IA 3U8KA 2BR8A 2W8FA 2VL0A 3JADA 2BYRA 3RIAA 5BP0A 4XHEA 4UM3S 3WTIA 3C84A 3WTNA 5AFNA 2BG9E 5HEUA 5J5GA 4AFHA 2XYSA 3P4WA 3WTMA 4AFTA 2W8GA 5CO5A 3IGQA 2YKSA 2WN9A 4Z91A 2XQ4A 2XZ5A 2Y56A 4BFQA 4ZK4A 3TLSA 3UU6A 2Y57A 2Y54A 3EI0A 2X00A 5HCJA 4ZJSA 2X00D 4QH5A 3SQ6A 2XQ7A 4HFBA 5TVCA 1UW6A 5IUXA 4ZK1A 2WNJA 3PMZA 2XZ6A 3C79A 5HEOA 5KE4A 4ILBA 3P50A 3RHWA 4Z90A 3T4MA 2BJ0A 2XNTA 4UM1A 1UV6A 4X5TA 5CFBA 4IL4A 2BR7A 4NPPA 4ZJTA 2YOEA 2BYQA 2BYNA 3U8NA 4UM3A 2XNVA 4QAAA 3TLVA 2XQ9A 3UQ4A 5J5HA 2XQ5A 4TNVA 3ZKRA 4COFA 2XQ3A 4NZBA 3TLWA 4BQTA 4HFHA 4QABA 4IL9A 3SH1A 3EHZA 3UU8A 1I9BA 3WIPA 5AFKA 5L47A 4HFCA 5AFHA 3PEOA 3TLTA 3EAMA 2PGZA 3LSVA 5BW2A 3WTHA 3SIOA 2XQ6A 3RI5A 4HFEA 4ILCA 2BG9B 2UZ6A 4LMKA 4D01A 5J5FA 3ZDGA 3JAEA 4EZ1A 5AFMA 4FRRA 4UM3P 4PIRA 3UU4A 4TWHA 3GUAA 3SQ9A 2YN6A 5L4HA 4ILAA 2QC1B 2BG9A 4TNWA 3WTJA 5L4EA 2WNLA 2XYTA 2PH9A 5SYOA 3U8MA
chains in the Genus database with same CATH topology
2XQAA 3WTLA 3U8LA 4AFGA 4DBMA 4ALXA 5KZUA 3JAFA 5HCMA 2WNCA 4QH4A 4ZZCA 5AFMB 4F8HA 3TLUA 2XQ8A 5HEGA 4WV9A 4TWFA 5LXBA 4LMJA 3UUBA 4A97A 5FJVA 4ZZBA 4XK9A 3UQ7A 2YMEA 5HEJA 4B5DA 5AFLA 5JMEA 2BYSA 5HEHA 4QH1A 3U8JA 3UU3A 3WTOA 3ZDHA 2ZJUA 4HFIA 4LMLA 2C9TA 3RQWA 1UX2A 2ZJVA 4UY2A 2BG9C 5AINA 4UXUA 2Y58A 5AFJA 3WTKA 2XNUA 4HQPA 2BYPA 3UU5A 4QACA 4HFDA 5LG3A 3RIFA 5BRXA 2WZYA 4TWDA 2Y7YA 4ZR6A 4IREA 4ZRUA 4A98A 5J0ZA 2YMDA 3RQUA 5J5IA 3U8KA 2BR8A 2W8FA 2VL0A 3JADA 2BYRA 3RIAA 5BP0A 4XHEA 4UM3S 3WTIA 3C84A 3WTNA 5AFNA 2BG9E 5HEUA 5J5GA 4AFHA 2XYSA 3P4WA 3WTMA 4AFTA 2W8GA 5CO5A 3IGQA 2YKSA 2WN9A 4Z91A 2XQ4A 2XZ5A 2Y56A 4BFQA 4ZK4A 3TLSA 3UU6A 2Y57A 2Y54A 3EI0A 2X00A 5HCJA 4ZJSA 2X00D 4QH5A 3SQ6A 2XQ7A 4HFBA 5TVCA 1UW6A 5IUXA 4ZK1A 2WNJA 3PMZA 2XZ6A 3C79A 5HEOA 5KE4A 4ILBA 3P50A 3RHWA 4Z90A 3T4MA 2BJ0A 2XNTA 4UM1A 1UV6A 4X5TA 5CFBA 4IL4A 2BR7A 4NPPA 4ZJTA 2YOEA 2BYQA 2BYNA 3U8NA 4UM3A 2XNVA 4QAAA 3TLVA 2XQ9A 3UQ4A 5J5HA 2XQ5A 4TNVA 3ZKRA 4COFA 2XQ3A 4NZBA 3TLWA 4BQTA 4HFHA 4QABA 4IL9A 3SH1A 3EHZA 3UU8A 1I9BA 3WIPA 5AFKA 5L47A 4HFCA 5AFHA 3PEOA 3TLTA 3EAMA 2PGZA 3LSVA 5BW2A 3WTHA 3SIOA 2XQ6A 3RI5A 4HFEA 4ILCA 2BG9B 2UZ6A 4LMKA 4D01A 5J5FA 3ZDGA 3JAEA 4EZ1A 5AFMA 4FRRA 4UM3P 4PIRA 3UU4A 4TWHA 3GUAA 3SQ9A 2YN6A 5L4HA 4ILAA 2QC1B 2BG9A 4TNWA 3WTJA 5L4EA 2WNLA 2XYTA 2PH9A 5SYOA 3U8MA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XQA A;  3WTL A;  3U8L A;  4AFG A;  4DBM A;  4ALX A;  5KZU A;  3JAF A;  5HCM A;  2WNC A;  4QH4 A;  4ZZC A;  5AFM B;  4F8H A;  3TLU A;  2XQ8 A;  5HEG A;  4WV9 A;  4TWF A;  5LXB A;  4LMJ A;  3UUB A;  4A97 A;  5FJV A;  4ZZB A;  4XK9 A;  3UQ7 A;  2YME A;  5HEJ A;  4B5D A;  5AFL A;  5JME A;  2BYS A;  5HEH A;  4QH1 A;  3U8J A;  3UU3 A;  3WTO A;  3ZDH A;  2ZJU A;  4HFI A;  4LML A;  2C9T A;  3RQW A;  1UX2 A;  2ZJV A;  4UY2 A;  2BG9 C;  5AIN A;  4UXU A;  2Y58 A;  5AFJ A;  3WTK A;  2XNU A;  4HQP A;  2BYP A;  3UU5 A;  4QAC A;  4HFD A;  5LG3 A;  3RIF A;  5BRX A;  2WZY A;  4TWD A;  2Y7Y A;  4ZR6 A;  4IRE A;  4ZRU A;  4A98 A;  5J0Z A;  2YMD A;  3RQU A;  5J5I A;  3U8K A;  2BR8 A;  2W8F A;  2VL0 A;  3JAD A;  2BYR A;  3RIA A;  5BP0 A;  4XHE A;  4UM3 S;  3WTI A;  3C84 A;  3WTN A;  5AFN A;  2BG9 E;  5HEU A;  5J5G A;  4AFH A;  2XYS A;  3P4W A;  3WTM A;  4AFT A;  2W8G A;  5CO5 A;  3IGQ A;  2YKS A;  2WN9 A;  4Z91 A;  2XQ4 A;  2XZ5 A;  2Y56 A;  4BFQ A;  4ZK4 A;  3TLS A;  3UU6 A;  2Y57 A;  2Y54 A;  3EI0 A;  2X00 A;  5HCJ A;  4ZJS A;  2X00 D;  4QH5 A;  3SQ6 A;  2XQ7 A;  4HFB A;  5TVC A;  1UW6 A;  5IUX A;  4ZK1 A;  2WNJ A;  3PMZ A;  2XZ6 A;  3C79 A;  5HEO A;  5KE4 A;  4ILB A;  3P50 A;  3RHW A;  4Z90 A;  3T4M A;  2BJ0 A;  2XNT A;  4UM1 A;  1UV6 A;  4X5T A;  5CFB A;  4IL4 A;  2BR7 A;  4NPP A;  4ZJT A;  2YOE A;  2BYQ A;  2BYN A;  3U8N A;  4UM3 A;  2XNV A;  4QAA A;  3TLV A;  2XQ9 A;  3UQ4 A;  5J5H A;  2XQ5 A;  4TNV A;  3ZKR A;  4COF A;  2XQ3 A;  4NZB A;  3TLW A;  4BQT A;  4HFH A;  4QAB A;  4IL9 A;  3SH1 A;  3EHZ A;  3UU8 A;  1I9B A;  3WIP A;  5AFK A;  5L47 A;  4HFC A;  5AFH A;  3PEO A;  3TLT A;  3EAM A;  2PGZ A;  3LSV A;  5BW2 A;  3WTH A;  3SIO A;  2XQ6 A;  3RI5 A;  4HFE A;  4ILC A;  2BG9 B;  2UZ6 A;  4LMK A;  4D01 A;  5J5F A;  3ZDG A;  3JAE A;  4EZ1 A;  5AFM A;  4FRR A;  4UM3 P;  4PIR A;  3UU4 A;  4TWH A;  3GUA A;  3SQ9 A;  2YN6 A;  5L4H A;  4ILA A;  2QC1 B;  2BG9 A;  4TNW A;  3WTJ A;  5L4E A;  2WNL A;  2XYT A;  2PH9 A;  5SYO A;  3U8M A; 
#chains in the Genus database with same CATH topology
 2XQA A;  3WTL A;  3U8L A;  4AFG A;  4DBM A;  4ALX A;  5KZU A;  3JAF A;  5HCM A;  2WNC A;  4QH4 A;  4ZZC A;  5AFM B;  4F8H A;  3TLU A;  2XQ8 A;  5HEG A;  4WV9 A;  4TWF A;  5LXB A;  4LMJ A;  3UUB A;  4A97 A;  5FJV A;  4ZZB A;  4XK9 A;  3UQ7 A;  2YME A;  5HEJ A;  4B5D A;  5AFL A;  5JME A;  2BYS A;  5HEH A;  4QH1 A;  3U8J A;  3UU3 A;  3WTO A;  3ZDH A;  2ZJU A;  4HFI A;  4LML A;  2C9T A;  3RQW A;  1UX2 A;  2ZJV A;  4UY2 A;  2BG9 C;  5AIN A;  4UXU A;  2Y58 A;  5AFJ A;  3WTK A;  2XNU A;  4HQP A;  2BYP A;  3UU5 A;  4QAC A;  4HFD A;  5LG3 A;  3RIF A;  5BRX A;  2WZY A;  4TWD A;  2Y7Y A;  4ZR6 A;  4IRE A;  4ZRU A;  4A98 A;  5J0Z A;  2YMD A;  3RQU A;  5J5I A;  3U8K A;  2BR8 A;  2W8F A;  2VL0 A;  3JAD A;  2BYR A;  3RIA A;  5BP0 A;  4XHE A;  4UM3 S;  3WTI A;  3C84 A;  3WTN A;  5AFN A;  2BG9 E;  5HEU A;  5J5G A;  4AFH A;  2XYS A;  3P4W A;  3WTM A;  4AFT A;  2W8G A;  5CO5 A;  3IGQ A;  2YKS A;  2WN9 A;  4Z91 A;  2XQ4 A;  2XZ5 A;  2Y56 A;  4BFQ A;  4ZK4 A;  3TLS A;  3UU6 A;  2Y57 A;  2Y54 A;  3EI0 A;  2X00 A;  5HCJ A;  4ZJS A;  2X00 D;  4QH5 A;  3SQ6 A;  2XQ7 A;  4HFB A;  5TVC A;  1UW6 A;  5IUX A;  4ZK1 A;  2WNJ A;  3PMZ A;  2XZ6 A;  3C79 A;  5HEO A;  5KE4 A;  4ILB A;  3P50 A;  3RHW A;  4Z90 A;  3T4M A;  2BJ0 A;  2XNT A;  4UM1 A;  1UV6 A;  4X5T A;  5CFB A;  4IL4 A;  2BR7 A;  4NPP A;  4ZJT A;  2YOE A;  2BYQ A;  2BYN A;  3U8N A;  4UM3 A;  2XNV A;  4QAA A;  3TLV A;  2XQ9 A;  3UQ4 A;  5J5H A;  2XQ5 A;  4TNV A;  3ZKR A;  4COF A;  2XQ3 A;  4NZB A;  3TLW A;  4BQT A;  4HFH A;  4QAB A;  4IL9 A;  3SH1 A;  3EHZ A;  3UU8 A;  1I9B A;  3WIP A;  5AFK A;  5L47 A;  4HFC A;  5AFH A;  3PEO A;  3TLT A;  3EAM A;  2PGZ A;  3LSV A;  5BW2 A;  3WTH A;  3SIO A;  2XQ6 A;  3RI5 A;  4HFE A;  4ILC A;  2BG9 B;  2UZ6 A;  4LMK A;  4D01 A;  5J5F A;  3ZDG A;  3JAE A;  4EZ1 A;  5AFM A;  4FRR A;  4UM3 P;  4PIR A;  3UU4 A;  4TWH A;  3GUA A;  3SQ9 A;  2YN6 A;  5L4H A;  4ILA A;  2QC1 B;  2BG9 A;  4TNW A;  3WTJ A;  5L4E A;  2WNL A;  2XYT A;  2PH9 A;  5SYO A;  3U8M A; 
#chains in the Genus database with same CATH homology
 2XQA A;  3WTL A;  3U8L A;  4AFG A;  4DBM A;  4ALX A;  5KZU A;  3JAF A;  5HCM A;  2WNC A;  4QH4 A;  4ZZC A;  5AFM B;  4F8H A;  3TLU A;  2XQ8 A;  5HEG A;  4WV9 A;  4TWF A;  5LXB A;  4LMJ A;  3UUB A;  4A97 A;  5FJV A;  4ZZB A;  4XK9 A;  3UQ7 A;  2YME A;  5HEJ A;  4B5D A;  5AFL A;  5JME A;  2BYS A;  5HEH A;  4QH1 A;  3U8J A;  3UU3 A;  3WTO A;  3ZDH A;  2ZJU A;  4HFI A;  4LML A;  2C9T A;  3RQW A;  1UX2 A;  2ZJV A;  4UY2 A;  2BG9 C;  5AIN A;  4UXU A;  2Y58 A;  5AFJ A;  3WTK A;  2XNU A;  4HQP A;  2BYP A;  3UU5 A;  4QAC A;  4HFD A;  5LG3 A;  3RIF A;  5BRX A;  2WZY A;  4TWD A;  2Y7Y A;  4ZR6 A;  4IRE A;  4ZRU A;  4A98 A;  5J0Z A;  2YMD A;  3RQU A;  5J5I A;  3U8K A;  2BR8 A;  2W8F A;  2VL0 A;  3JAD A;  2BYR A;  3RIA A;  5BP0 A;  4XHE A;  4UM3 S;  3WTI A;  3C84 A;  3WTN A;  5AFN A;  2BG9 E;  5HEU A;  5J5G A;  4AFH A;  2XYS A;  3P4W A;  3WTM A;  4AFT A;  2W8G A;  5CO5 A;  3IGQ A;  2YKS A;  2WN9 A;  4Z91 A;  2XQ4 A;  2XZ5 A;  2Y56 A;  4BFQ A;  4ZK4 A;  3TLS A;  3UU6 A;  2Y57 A;  2Y54 A;  3EI0 A;  2X00 A;  5HCJ A;  4ZJS A;  2X00 D;  4QH5 A;  3SQ6 A;  2XQ7 A;  4HFB A;  5TVC A;  1UW6 A;  5IUX A;  4ZK1 A;  2WNJ A;  3PMZ A;  2XZ6 A;  3C79 A;  5HEO A;  5KE4 A;  4ILB A;  3P50 A;  3RHW A;  4Z90 A;  3T4M A;  2BJ0 A;  2XNT A;  4UM1 A;  1UV6 A;  4X5T A;  5CFB A;  4IL4 A;  2BR7 A;  4NPP A;  4ZJT A;  2YOE A;  2BYQ A;  2BYN A;  3U8N A;  4UM3 A;  2XNV A;  4QAA A;  3TLV A;  2XQ9 A;  3UQ4 A;  5J5H A;  2XQ5 A;  4TNV A;  3ZKR A;  4COF A;  2XQ3 A;  4NZB A;  3TLW A;  4BQT A;  4HFH A;  4QAB A;  4IL9 A;  3SH1 A;  3EHZ A;  3UU8 A;  1I9B A;  3WIP A;  5AFK A;  5L47 A;  4HFC A;  5AFH A;  3PEO A;  3TLT A;  3EAM A;  2PGZ A;  3LSV A;  5BW2 A;  3WTH A;  3SIO A;  2XQ6 A;  3RI5 A;  4HFE A;  4ILC A;  2BG9 B;  2UZ6 A;  4LMK A;  4D01 A;  5J5F A;  3ZDG A;  3JAE A;  4EZ1 A;  5AFM A;  4FRR A;  4UM3 P;  4PIR A;  3UU4 A;  4TWH A;  3GUA A;  3SQ9 A;  2YN6 A;  5L4H A;  4ILA A;  2QC1 B;  2BG9 A;  4TNW A;  3WTJ A;  5L4E A;  2WNL A;  2XYT A;  2PH9 A;  5SYO A;  3U8M A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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