2XZ5A

Mmts-modified y53c mutant of aplysia achbp in complex with acetylcholine
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
207
structure length
206
Chain Sequence
QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRERRA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Receptor
source organism Aplysia californica
publication title Crystal Structures of a Cysteine-Modified Mutant in Loop D of Acetylcholine Binding Protein
pubmed doi rcsb
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
total genus 48
structure length 206
sequence length 207
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2010-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2xz5A00
4QH4A 5BP0A 5L4HA 3WTKA 4NZBA 3WTLA 5J5FA 3UQ4A 2YOEA 4HFHA 4XK9A 4Z90A 2BYPA 2Y56A 2BYQA 4AFGA 2YMEA 4TWFA 2XYTA 2XNVA 5AINA 1UV6A 4ILAA 2C9TA 3TLSA 2YN6A 3EAMA 5HEOA 5SYOA 4ZJTA 5AFKA 3EI0A 4X5TA 4ALXA 3T4MA 1UX2A 4IREA 5AFNA 2XQ8A 4D01A 4BQTA 3ZDHA 3SIOA 5CFBA 2XQ4A 1UW6A 3WTJA 2ZJVA 2XZ6A 5HEUA 4ZZCA 5HEGA 5J0ZA 4LMLA 4ZRUA 4XHEA 2BG9A 3P4WA 2BG9C 2XNUA 3JAEA 2XQAA 4LMKA 2YKSA 3JAFA 3IGQA 2X00A 2BYNA 4UM1A 4EZ1A 5L4EA 3TLTA 2BG9B 2XQ5A 3C84A 3TLVA 4HFBA 3LSVA 2VL0A 2W8GA 5HEHA 4DBMA 3RHWA 4B5DA 3U8MA 3GUAA 3PMZA 2XYSA 3RI5A 4TNWA 2YMDA 4UM3A 3RIFA 4QH1A 3UUBA 4ZR6A 2WNLA 4HFEA 2Y54A 4HFDA 4FRRA 4ILBA 4TWHA 3WIPA 5AFLA 3SQ9A 2XZ5A 4ZK1A 3RQUA 4UM3P 2W8FA 2XQ3A 5TVCA 4AFHA 5LG3A 4BFQA 3U8JA 3UQ7A 2Y7YA 2WNJA 4ZK4A 3WTMA 3WTHA 2X00D 2BR7A 2WZYA 4NPPA 1I9BA 4HFCA 5AFJA 3TLWA 4ILCA 5FJVA 4ZJSA 5AFMB 3RQWA 4LMJA 5JMEA 2Y58A 2XQ9A 4A98A 4IL4A 3PEOA 3JADA 4HFIA 3WTNA 5IUXA 2Y57A 2BG9E 4QH5A 3WTIA 3UU8A 2BJ0A 5AFHA 3U8KA 4TWDA 2PGZA 4WV9A 4QACA 4UXUA 5L47A 3SQ6A 5KE4A 3U8LA 4F8HA 2XQ7A 5J5IA 5BW2A 2WNCA 5AFMA 4QAAA 5LXBA 2XQ6A 2UZ6A 3RIAA 3ZKRA 2WN9A 3TLUA 2BYSA 5J5HA 3U8NA 4IL9A 3ZDGA 3UU4A 4UY2A 3UU5A 2BR8A 2QC1B 2ZJUA 5KZUA 4Z91A 4A97A 5HEJA 3C79A 4TNVA 2XNTA 3EHZA 3P50A 4AFTA 4QABA 5J5GA 4HQPA 3WTOA 4UM3S 2PH9A 5BRXA 4ZZBA 5CO5A 2BYRA 5HCJA 3SH1A 4PIRA 3UU6A 5HCMA 3UU3A 4COFA
chains in the Genus database with same CATH superfamily
4QH4A 5BP0A 5L4HA 3WTKA 4NZBA 3WTLA 5J5FA 3UQ4A 2YOEA 4HFHA 4XK9A 4Z90A 2BYPA 2Y56A 2BYQA 4AFGA 2YMEA 4TWFA 2XYTA 2XNVA 5AINA 1UV6A 4ILAA 2C9TA 3TLSA 2YN6A 3EAMA 5HEOA 5SYOA 4ZJTA 5AFKA 3EI0A 4X5TA 4ALXA 3T4MA 1UX2A 4IREA 5AFNA 2XQ8A 4D01A 4BQTA 3ZDHA 3SIOA 5CFBA 2XQ4A 1UW6A 3WTJA 2ZJVA 2XZ6A 5HEUA 4ZZCA 5HEGA 5J0ZA 4LMLA 4ZRUA 4XHEA 2BG9A 3P4WA 2BG9C 2XNUA 3JAEA 2XQAA 4LMKA 2YKSA 3JAFA 3IGQA 2X00A 2BYNA 4UM1A 4EZ1A 5L4EA 3TLTA 2BG9B 2XQ5A 3C84A 3TLVA 4HFBA 3LSVA 2VL0A 2W8GA 5HEHA 4DBMA 3RHWA 4B5DA 3U8MA 3GUAA 3PMZA 2XYSA 3RI5A 4TNWA 2YMDA 4UM3A 3RIFA 4QH1A 3UUBA 4ZR6A 2WNLA 4HFEA 2Y54A 4HFDA 4FRRA 4ILBA 4TWHA 3WIPA 5AFLA 3SQ9A 2XZ5A 4ZK1A 3RQUA 4UM3P 2W8FA 2XQ3A 5TVCA 4AFHA 5LG3A 4BFQA 3U8JA 3UQ7A 2Y7YA 2WNJA 4ZK4A 3WTMA 3WTHA 2X00D 2BR7A 2WZYA 4NPPA 1I9BA 4HFCA 5AFJA 3TLWA 4ILCA 5FJVA 4ZJSA 5AFMB 3RQWA 4LMJA 5JMEA 2Y58A 2XQ9A 4A98A 4IL4A 3PEOA 3JADA 4HFIA 3WTNA 5IUXA 2Y57A 2BG9E 4QH5A 3WTIA 3UU8A 2BJ0A 5AFHA 3U8KA 4TWDA 2PGZA 4WV9A 4QACA 4UXUA 5L47A 3SQ6A 5KE4A 3U8LA 4F8HA 2XQ7A 5J5IA 5BW2A 2WNCA 5AFMA 4QAAA 5LXBA 2XQ6A 2UZ6A 3RIAA 3ZKRA 2WN9A 3TLUA 2BYSA 5J5HA 3U8NA 4IL9A 3ZDGA 3UU4A 4UY2A 3UU5A 2BR8A 2QC1B 2ZJUA 5KZUA 4Z91A 4A97A 5HEJA 3C79A 4TNVA 2XNTA 3EHZA 3P50A 4AFTA 4QABA 5J5GA 4HQPA 3WTOA 4UM3S 2PH9A 5BRXA 4ZZBA 5CO5A 2BYRA 5HCJA 3SH1A 4PIRA 3UU6A 5HCMA 3UU3A 4COFA
chains in the Genus database with same CATH topology
4QH4A 5BP0A 5L4HA 3WTKA 4NZBA 3WTLA 5J5FA 3UQ4A 2YOEA 4HFHA 4XK9A 4Z90A 2BYPA 2Y56A 2BYQA 4AFGA 2YMEA 4TWFA 2XYTA 2XNVA 5AINA 1UV6A 4ILAA 2C9TA 3TLSA 2YN6A 3EAMA 5HEOA 5SYOA 4ZJTA 5AFKA 3EI0A 4X5TA 4ALXA 3T4MA 1UX2A 4IREA 5AFNA 2XQ8A 4D01A 4BQTA 3ZDHA 3SIOA 5CFBA 2XQ4A 1UW6A 3WTJA 2ZJVA 2XZ6A 5HEUA 4ZZCA 5HEGA 5J0ZA 4LMLA 4ZRUA 4XHEA 2BG9A 3P4WA 2BG9C 2XNUA 3JAEA 2XQAA 4LMKA 2YKSA 3JAFA 3IGQA 2X00A 2BYNA 4UM1A 4EZ1A 5L4EA 3TLTA 2BG9B 2XQ5A 3C84A 3TLVA 4HFBA 3LSVA 2VL0A 2W8GA 5HEHA 4DBMA 3RHWA 4B5DA 3U8MA 3GUAA 3PMZA 2XYSA 3RI5A 4TNWA 2YMDA 4UM3A 3RIFA 4QH1A 3UUBA 4ZR6A 2WNLA 4HFEA 2Y54A 4HFDA 4FRRA 4ILBA 4TWHA 3WIPA 5AFLA 3SQ9A 2XZ5A 4ZK1A 3RQUA 4UM3P 2W8FA 2XQ3A 5TVCA 4AFHA 5LG3A 4BFQA 3U8JA 3UQ7A 2Y7YA 2WNJA 4ZK4A 3WTMA 3WTHA 2X00D 2BR7A 2WZYA 4NPPA 1I9BA 4HFCA 5AFJA 3TLWA 4ILCA 5FJVA 4ZJSA 5AFMB 3RQWA 4LMJA 5JMEA 2Y58A 2XQ9A 4A98A 4IL4A 3PEOA 3JADA 4HFIA 3WTNA 5IUXA 2Y57A 2BG9E 4QH5A 3WTIA 3UU8A 2BJ0A 5AFHA 3U8KA 4TWDA 2PGZA 4WV9A 4QACA 4UXUA 5L47A 3SQ6A 5KE4A 3U8LA 4F8HA 2XQ7A 5J5IA 5BW2A 2WNCA 5AFMA 4QAAA 5LXBA 2XQ6A 2UZ6A 3RIAA 3ZKRA 2WN9A 3TLUA 2BYSA 5J5HA 3U8NA 4IL9A 3ZDGA 3UU4A 4UY2A 3UU5A 2BR8A 2QC1B 2ZJUA 5KZUA 4Z91A 4A97A 5HEJA 3C79A 4TNVA 2XNTA 3EHZA 3P50A 4AFTA 4QABA 5J5GA 4HQPA 3WTOA 4UM3S 2PH9A 5BRXA 4ZZBA 5CO5A 2BYRA 5HCJA 3SH1A 4PIRA 3UU6A 5HCMA 3UU3A 4COFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QH4 A;  5BP0 A;  5L4H A;  3WTK A;  4NZB A;  3WTL A;  5J5F A;  3UQ4 A;  2YOE A;  4HFH A;  4XK9 A;  4Z90 A;  2BYP A;  2Y56 A;  2BYQ A;  4AFG A;  2YME A;  4TWF A;  2XYT A;  2XNV A;  5AIN A;  1UV6 A;  4ILA A;  2C9T A;  3TLS A;  2YN6 A;  3EAM A;  5HEO A;  5SYO A;  4ZJT A;  5AFK A;  3EI0 A;  4X5T A;  4ALX A;  3T4M A;  1UX2 A;  4IRE A;  5AFN A;  2XQ8 A;  4D01 A;  4BQT A;  3ZDH A;  3SIO A;  5CFB A;  2XQ4 A;  1UW6 A;  3WTJ A;  2ZJV A;  2XZ6 A;  5HEU A;  4ZZC A;  5HEG A;  5J0Z A;  4LML A;  4ZRU A;  4XHE A;  2BG9 A;  3P4W A;  2BG9 C;  2XNU A;  3JAE A;  2XQA A;  4LMK A;  2YKS A;  3JAF A;  3IGQ A;  2X00 A;  2BYN A;  4UM1 A;  4EZ1 A;  5L4E A;  3TLT A;  2BG9 B;  2XQ5 A;  3C84 A;  3TLV A;  4HFB A;  3LSV A;  2VL0 A;  2W8G A;  5HEH A;  4DBM A;  3RHW A;  4B5D A;  3U8M A;  3GUA A;  3PMZ A;  2XYS A;  3RI5 A;  4TNW A;  2YMD A;  4UM3 A;  3RIF A;  4QH1 A;  3UUB A;  4ZR6 A;  2WNL A;  4HFE A;  2Y54 A;  4HFD A;  4FRR A;  4ILB A;  4TWH A;  3WIP A;  5AFL A;  3SQ9 A;  2XZ5 A;  4ZK1 A;  3RQU A;  4UM3 P;  2W8F A;  2XQ3 A;  5TVC A;  4AFH A;  5LG3 A;  4BFQ A;  3U8J A;  3UQ7 A;  2Y7Y A;  2WNJ A;  4ZK4 A;  3WTM A;  3WTH A;  2X00 D;  2BR7 A;  2WZY A;  4NPP A;  1I9B A;  4HFC A;  5AFJ A;  3TLW A;  4ILC A;  5FJV A;  4ZJS A;  5AFM B;  3RQW A;  4LMJ A;  5JME A;  2Y58 A;  2XQ9 A;  4A98 A;  4IL4 A;  3PEO A;  3JAD A;  4HFI A;  3WTN A;  5IUX A;  2Y57 A;  2BG9 E;  4QH5 A;  3WTI A;  3UU8 A;  2BJ0 A;  5AFH A;  3U8K A;  4TWD A;  2PGZ A;  4WV9 A;  4QAC A;  4UXU A;  5L47 A;  3SQ6 A;  5KE4 A;  3U8L A;  4F8H A;  2XQ7 A;  5J5I A;  5BW2 A;  2WNC A;  5AFM A;  4QAA A;  5LXB A;  2XQ6 A;  2UZ6 A;  3RIA A;  3ZKR A;  2WN9 A;  3TLU A;  2BYS A;  5J5H A;  3U8N A;  4IL9 A;  3ZDG A;  3UU4 A;  4UY2 A;  3UU5 A;  2BR8 A;  2QC1 B;  2ZJU A;  5KZU A;  4Z91 A;  4A97 A;  5HEJ A;  3C79 A;  4TNV A;  2XNT A;  3EHZ A;  3P50 A;  4AFT A;  4QAB A;  5J5G A;  4HQP A;  3WTO A;  4UM3 S;  2PH9 A;  5BRX A;  4ZZB A;  5CO5 A;  2BYR A;  5HCJ A;  3SH1 A;  4PIR A;  3UU6 A;  5HCM A;  3UU3 A;  4COF A; 
#chains in the Genus database with same CATH topology
 4QH4 A;  5BP0 A;  5L4H A;  3WTK A;  4NZB A;  3WTL A;  5J5F A;  3UQ4 A;  2YOE A;  4HFH A;  4XK9 A;  4Z90 A;  2BYP A;  2Y56 A;  2BYQ A;  4AFG A;  2YME A;  4TWF A;  2XYT A;  2XNV A;  5AIN A;  1UV6 A;  4ILA A;  2C9T A;  3TLS A;  2YN6 A;  3EAM A;  5HEO A;  5SYO A;  4ZJT A;  5AFK A;  3EI0 A;  4X5T A;  4ALX A;  3T4M A;  1UX2 A;  4IRE A;  5AFN A;  2XQ8 A;  4D01 A;  4BQT A;  3ZDH A;  3SIO A;  5CFB A;  2XQ4 A;  1UW6 A;  3WTJ A;  2ZJV A;  2XZ6 A;  5HEU A;  4ZZC A;  5HEG A;  5J0Z A;  4LML A;  4ZRU A;  4XHE A;  2BG9 A;  3P4W A;  2BG9 C;  2XNU A;  3JAE A;  2XQA A;  4LMK A;  2YKS A;  3JAF A;  3IGQ A;  2X00 A;  2BYN A;  4UM1 A;  4EZ1 A;  5L4E A;  3TLT A;  2BG9 B;  2XQ5 A;  3C84 A;  3TLV A;  4HFB A;  3LSV A;  2VL0 A;  2W8G A;  5HEH A;  4DBM A;  3RHW A;  4B5D A;  3U8M A;  3GUA A;  3PMZ A;  2XYS A;  3RI5 A;  4TNW A;  2YMD A;  4UM3 A;  3RIF A;  4QH1 A;  3UUB A;  4ZR6 A;  2WNL A;  4HFE A;  2Y54 A;  4HFD A;  4FRR A;  4ILB A;  4TWH A;  3WIP A;  5AFL A;  3SQ9 A;  2XZ5 A;  4ZK1 A;  3RQU A;  4UM3 P;  2W8F A;  2XQ3 A;  5TVC A;  4AFH A;  5LG3 A;  4BFQ A;  3U8J A;  3UQ7 A;  2Y7Y A;  2WNJ A;  4ZK4 A;  3WTM A;  3WTH A;  2X00 D;  2BR7 A;  2WZY A;  4NPP A;  1I9B A;  4HFC A;  5AFJ A;  3TLW A;  4ILC A;  5FJV A;  4ZJS A;  5AFM B;  3RQW A;  4LMJ A;  5JME A;  2Y58 A;  2XQ9 A;  4A98 A;  4IL4 A;  3PEO A;  3JAD A;  4HFI A;  3WTN A;  5IUX A;  2Y57 A;  2BG9 E;  4QH5 A;  3WTI A;  3UU8 A;  2BJ0 A;  5AFH A;  3U8K A;  4TWD A;  2PGZ A;  4WV9 A;  4QAC A;  4UXU A;  5L47 A;  3SQ6 A;  5KE4 A;  3U8L A;  4F8H A;  2XQ7 A;  5J5I A;  5BW2 A;  2WNC A;  5AFM A;  4QAA A;  5LXB A;  2XQ6 A;  2UZ6 A;  3RIA A;  3ZKR A;  2WN9 A;  3TLU A;  2BYS A;  5J5H A;  3U8N A;  4IL9 A;  3ZDG A;  3UU4 A;  4UY2 A;  3UU5 A;  2BR8 A;  2QC1 B;  2ZJU A;  5KZU A;  4Z91 A;  4A97 A;  5HEJ A;  3C79 A;  4TNV A;  2XNT A;  3EHZ A;  3P50 A;  4AFT A;  4QAB A;  5J5G A;  4HQP A;  3WTO A;  4UM3 S;  2PH9 A;  5BRX A;  4ZZB A;  5CO5 A;  2BYR A;  5HCJ A;  3SH1 A;  4PIR A;  3UU6 A;  5HCM A;  3UU3 A;  4COF A; 
#chains in the Genus database with same CATH homology
 4QH4 A;  5BP0 A;  5L4H A;  3WTK A;  4NZB A;  3WTL A;  5J5F A;  3UQ4 A;  2YOE A;  4HFH A;  4XK9 A;  4Z90 A;  2BYP A;  2Y56 A;  2BYQ A;  4AFG A;  2YME A;  4TWF A;  2XYT A;  2XNV A;  5AIN A;  1UV6 A;  4ILA A;  2C9T A;  3TLS A;  2YN6 A;  3EAM A;  5HEO A;  5SYO A;  4ZJT A;  5AFK A;  3EI0 A;  4X5T A;  4ALX A;  3T4M A;  1UX2 A;  4IRE A;  5AFN A;  2XQ8 A;  4D01 A;  4BQT A;  3ZDH A;  3SIO A;  5CFB A;  2XQ4 A;  1UW6 A;  3WTJ A;  2ZJV A;  2XZ6 A;  5HEU A;  4ZZC A;  5HEG A;  5J0Z A;  4LML A;  4ZRU A;  4XHE A;  2BG9 A;  3P4W A;  2BG9 C;  2XNU A;  3JAE A;  2XQA A;  4LMK A;  2YKS A;  3JAF A;  3IGQ A;  2X00 A;  2BYN A;  4UM1 A;  4EZ1 A;  5L4E A;  3TLT A;  2BG9 B;  2XQ5 A;  3C84 A;  3TLV A;  4HFB A;  3LSV A;  2VL0 A;  2W8G A;  5HEH A;  4DBM A;  3RHW A;  4B5D A;  3U8M A;  3GUA A;  3PMZ A;  2XYS A;  3RI5 A;  4TNW A;  2YMD A;  4UM3 A;  3RIF A;  4QH1 A;  3UUB A;  4ZR6 A;  2WNL A;  4HFE A;  2Y54 A;  4HFD A;  4FRR A;  4ILB A;  4TWH A;  3WIP A;  5AFL A;  3SQ9 A;  2XZ5 A;  4ZK1 A;  3RQU A;  4UM3 P;  2W8F A;  2XQ3 A;  5TVC A;  4AFH A;  5LG3 A;  4BFQ A;  3U8J A;  3UQ7 A;  2Y7Y A;  2WNJ A;  4ZK4 A;  3WTM A;  3WTH A;  2X00 D;  2BR7 A;  2WZY A;  4NPP A;  1I9B A;  4HFC A;  5AFJ A;  3TLW A;  4ILC A;  5FJV A;  4ZJS A;  5AFM B;  3RQW A;  4LMJ A;  5JME A;  2Y58 A;  2XQ9 A;  4A98 A;  4IL4 A;  3PEO A;  3JAD A;  4HFI A;  3WTN A;  5IUX A;  2Y57 A;  2BG9 E;  4QH5 A;  3WTI A;  3UU8 A;  2BJ0 A;  5AFH A;  3U8K A;  4TWD A;  2PGZ A;  4WV9 A;  4QAC A;  4UXU A;  5L47 A;  3SQ6 A;  5KE4 A;  3U8L A;  4F8H A;  2XQ7 A;  5J5I A;  5BW2 A;  2WNC A;  5AFM A;  4QAA A;  5LXB A;  2XQ6 A;  2UZ6 A;  3RIA A;  3ZKR A;  2WN9 A;  3TLU A;  2BYS A;  5J5H A;  3U8N A;  4IL9 A;  3ZDG A;  3UU4 A;  4UY2 A;  3UU5 A;  2BR8 A;  2QC1 B;  2ZJU A;  5KZU A;  4Z91 A;  4A97 A;  5HEJ A;  3C79 A;  4TNV A;  2XNT A;  3EHZ A;  3P50 A;  4AFT A;  4QAB A;  5J5G A;  4HQP A;  3WTO A;  4UM3 S;  2PH9 A;  5BRX A;  4ZZB A;  5CO5 A;  2BYR A;  5HCJ A;  3SH1 A;  4PIR A;  3UU6 A;  5HCM A;  3UU3 A;  4COF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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