5KZUA

Crystal structure of an acetylcholine binding protein from aplysia californica (ac-achbp) in complex with click chemistry compound 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole
Total Genus 49
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
208
structure length
207
Chain Sequence
KLHSQANLMRLKSDLFNRPMYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Acetylcholine-binding protein
molecule keywords Soluble acetylcholine receptor
publication title Crystal structure of a chimeric acetylcholine binding protein from Aplysia californica (Ac-AChBP) in complex with click chemistry compound 9-[[1-[8-methyl-8-(2-phenylethyl)-8-azoniabicyclo[3.2.1]octan-3-yl]triazol-4-yl]methyl]carbazole
rcsb
source organism Aplysia californica
total genus 49
structure length 207
sequence length 208
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2016-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 5kzuA00
2XNTA 4HQPA 4HFCA 3UU5A 2YMEA 5HEHA 2XQAA 4FRRA 4HFDA 4PIRA 4ZK1A 4UM3A 2C9TA 2BJ0A 2Y56A 4F8HA 4QH1A 5AFHA 4DBMA 2WN9A 2WZYA 3RIFA 3ZDHA 5AFMA 4XHEA 5AINA 5J0ZA 5HEOA 5HEGA 3TLWA 5J5HA 5HCMA 2XQ7A 3WTMA 2W8FA 3EAMA 3RQUA 5HEUA 5LG3A 3WTLA 4UM1A 5J5FA 3UQ4A 5KZUA 4HFEA 2XQ3A 2YN6A 3WTKA 4Z90A 4IL9A 5AFLA 5L4EA 1UX2A 2WNLA 2BR7A 4ILBA 2UZ6A 5JMEA 2BYNA 3RQWA 2W8GA 4QH5A 1UW6A 2QC1B 3U8JA 4A98A 2PH9A 4HFBA 3IGQA 5KE4A 4QH4A 3UU4A 3TLSA 4TWHA 4QACA 2XYSA 3LSVA 4NPPA 3T4MA 2X00A 2XZ6A 5FJVA 5HCJA 3ZDGA 5J5IA 2BG9C 2BYQA 4X5TA 3WIPA 2YOEA 4BQTA 4BFQA 2BG9A 4B5DA 4TNVA 5J5GA 4ALXA 3RI5A 4AFTA 2X00D 3UU6A 2BYPA 5CO5A 5IUXA 2PGZA 3EI0A 2Y54A 4ZRUA 4QAAA 2BYSA 2Y58A 4QABA 3RIAA 5BP0A 3EHZA 2VL0A 4LMKA 3WTNA 4ILAA 4EZ1A 4A97A 2ZJVA 5AFMB 3WTHA 4ZJTA 4D01A 4ZR6A 3P50A 2BG9E 3WTIA 2XQ4A 5LXBA 4LMLA 3WTJA 3GUAA 3PEOA 4ZJSA 4IREA 5AFJA 3SQ9A 2XQ5A 2BYRA 2Y57A 3TLUA 2XYTA 3UUBA 3PMZA 5CFBA 2ZJUA 4HFIA 4ZZBA 5L47A 3UU3A 2XQ8A 5TVCA 4HFHA 3UQ7A 4TWFA 2YKSA 2XQ9A 4TWDA 4UM3P 4AFGA 3SIOA 3U8LA 4TNWA 5AFNA 4WV9A 4UM3S 3TLVA 3JAFA 4UXUA 4NZBA 2Y7YA 4XK9A 3SQ6A 4UY2A 1I9BA 2XNVA 4AFHA 3U8MA 3U8NA 3JADA 3C84A 2WNCA 5SYOA 2BG9B 4ZK4A 3SH1A 3ZKRA 4ILCA 3RHWA 2XZ5A 2BR8A 3P4WA 1UV6A 5BW2A 4Z91A 3TLTA 3WTOA 3U8KA 5HEJA 4LMJA 3JAEA 5BRXA 2XNUA 5AFKA 4COFA 2XQ6A 4ZZCA 4IL4A 2YMDA 3UU8A 5L4HA 3C79A 2WNJA
chains in the Genus database with same CATH superfamily
2XNTA 4HQPA 4HFCA 3UU5A 2YMEA 5HEHA 2XQAA 4FRRA 4HFDA 4PIRA 4ZK1A 4UM3A 2C9TA 2BJ0A 2Y56A 4F8HA 4QH1A 5AFHA 4DBMA 2WN9A 2WZYA 3RIFA 3ZDHA 5AFMA 4XHEA 5AINA 5J0ZA 5HEOA 5HEGA 3TLWA 5J5HA 5HCMA 2XQ7A 3WTMA 2W8FA 3EAMA 3RQUA 5HEUA 5LG3A 3WTLA 4UM1A 5J5FA 3UQ4A 5KZUA 4HFEA 2XQ3A 2YN6A 3WTKA 4Z90A 4IL9A 5AFLA 5L4EA 1UX2A 2WNLA 2BR7A 4ILBA 2UZ6A 5JMEA 2BYNA 3RQWA 2W8GA 4QH5A 1UW6A 2QC1B 3U8JA 4A98A 2PH9A 4HFBA 3IGQA 5KE4A 4QH4A 3UU4A 3TLSA 4TWHA 4QACA 2XYSA 3LSVA 4NPPA 3T4MA 2X00A 2XZ6A 5FJVA 5HCJA 3ZDGA 5J5IA 2BG9C 2BYQA 4X5TA 3WIPA 2YOEA 4BQTA 4BFQA 2BG9A 4B5DA 4TNVA 5J5GA 4ALXA 3RI5A 4AFTA 2X00D 3UU6A 2BYPA 5CO5A 5IUXA 2PGZA 3EI0A 2Y54A 4ZRUA 4QAAA 2BYSA 2Y58A 4QABA 3RIAA 5BP0A 3EHZA 2VL0A 4LMKA 3WTNA 4ILAA 4EZ1A 4A97A 2ZJVA 5AFMB 3WTHA 4ZJTA 4D01A 4ZR6A 3P50A 2BG9E 3WTIA 2XQ4A 5LXBA 4LMLA 3WTJA 3GUAA 3PEOA 4ZJSA 4IREA 5AFJA 3SQ9A 2XQ5A 2BYRA 2Y57A 3TLUA 2XYTA 3UUBA 3PMZA 5CFBA 2ZJUA 4HFIA 4ZZBA 5L47A 3UU3A 2XQ8A 5TVCA 4HFHA 3UQ7A 4TWFA 2YKSA 2XQ9A 4TWDA 4UM3P 4AFGA 3SIOA 3U8LA 4TNWA 5AFNA 4WV9A 4UM3S 3TLVA 3JAFA 4UXUA 4NZBA 2Y7YA 4XK9A 3SQ6A 4UY2A 1I9BA 2XNVA 4AFHA 3U8MA 3U8NA 3JADA 3C84A 2WNCA 5SYOA 2BG9B 4ZK4A 3SH1A 3ZKRA 4ILCA 3RHWA 2XZ5A 2BR8A 3P4WA 1UV6A 5BW2A 4Z91A 3TLTA 3WTOA 3U8KA 5HEJA 4LMJA 3JAEA 5BRXA 2XNUA 5AFKA 4COFA 2XQ6A 4ZZCA 4IL4A 2YMDA 3UU8A 5L4HA 3C79A 2WNJA
chains in the Genus database with same CATH topology
2XNTA 4HQPA 4HFCA 3UU5A 2YMEA 5HEHA 2XQAA 4FRRA 4HFDA 4PIRA 4ZK1A 4UM3A 2C9TA 2BJ0A 2Y56A 4F8HA 4QH1A 5AFHA 4DBMA 2WN9A 2WZYA 3RIFA 3ZDHA 5AFMA 4XHEA 5AINA 5J0ZA 5HEOA 5HEGA 3TLWA 5J5HA 5HCMA 2XQ7A 3WTMA 2W8FA 3EAMA 3RQUA 5HEUA 5LG3A 3WTLA 4UM1A 5J5FA 3UQ4A 5KZUA 4HFEA 2XQ3A 2YN6A 3WTKA 4Z90A 4IL9A 5AFLA 5L4EA 1UX2A 2WNLA 2BR7A 4ILBA 2UZ6A 5JMEA 2BYNA 3RQWA 2W8GA 4QH5A 1UW6A 2QC1B 3U8JA 4A98A 2PH9A 4HFBA 3IGQA 5KE4A 4QH4A 3UU4A 3TLSA 4TWHA 4QACA 2XYSA 3LSVA 4NPPA 3T4MA 2X00A 2XZ6A 5FJVA 5HCJA 3ZDGA 5J5IA 2BG9C 2BYQA 4X5TA 3WIPA 2YOEA 4BQTA 4BFQA 2BG9A 4B5DA 4TNVA 5J5GA 4ALXA 3RI5A 4AFTA 2X00D 3UU6A 2BYPA 5CO5A 5IUXA 2PGZA 3EI0A 2Y54A 4ZRUA 4QAAA 2BYSA 2Y58A 4QABA 3RIAA 5BP0A 3EHZA 2VL0A 4LMKA 3WTNA 4ILAA 4EZ1A 4A97A 2ZJVA 5AFMB 3WTHA 4ZJTA 4D01A 4ZR6A 3P50A 2BG9E 3WTIA 2XQ4A 5LXBA 4LMLA 3WTJA 3GUAA 3PEOA 4ZJSA 4IREA 5AFJA 3SQ9A 2XQ5A 2BYRA 2Y57A 3TLUA 2XYTA 3UUBA 3PMZA 5CFBA 2ZJUA 4HFIA 4ZZBA 5L47A 3UU3A 2XQ8A 5TVCA 4HFHA 3UQ7A 4TWFA 2YKSA 2XQ9A 4TWDA 4UM3P 4AFGA 3SIOA 3U8LA 4TNWA 5AFNA 4WV9A 4UM3S 3TLVA 3JAFA 4UXUA 4NZBA 2Y7YA 4XK9A 3SQ6A 4UY2A 1I9BA 2XNVA 4AFHA 3U8MA 3U8NA 3JADA 3C84A 2WNCA 5SYOA 2BG9B 4ZK4A 3SH1A 3ZKRA 4ILCA 3RHWA 2XZ5A 2BR8A 3P4WA 1UV6A 5BW2A 4Z91A 3TLTA 3WTOA 3U8KA 5HEJA 4LMJA 3JAEA 5BRXA 2XNUA 5AFKA 4COFA 2XQ6A 4ZZCA 4IL4A 2YMDA 3UU8A 5L4HA 3C79A 2WNJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XNT A;  4HQP A;  4HFC A;  3UU5 A;  2YME A;  5HEH A;  2XQA A;  4FRR A;  4HFD A;  4PIR A;  4ZK1 A;  4UM3 A;  2C9T A;  2BJ0 A;  2Y56 A;  4F8H A;  4QH1 A;  5AFH A;  4DBM A;  2WN9 A;  2WZY A;  3RIF A;  3ZDH A;  5AFM A;  4XHE A;  5AIN A;  5J0Z A;  5HEO A;  5HEG A;  3TLW A;  5J5H A;  5HCM A;  2XQ7 A;  3WTM A;  2W8F A;  3EAM A;  3RQU A;  5HEU A;  5LG3 A;  3WTL A;  4UM1 A;  5J5F A;  3UQ4 A;  5KZU A;  4HFE A;  2XQ3 A;  2YN6 A;  3WTK A;  4Z90 A;  4IL9 A;  5AFL A;  5L4E A;  1UX2 A;  2WNL A;  2BR7 A;  4ILB A;  2UZ6 A;  5JME A;  2BYN A;  3RQW A;  2W8G A;  4QH5 A;  1UW6 A;  2QC1 B;  3U8J A;  4A98 A;  2PH9 A;  4HFB A;  3IGQ A;  5KE4 A;  4QH4 A;  3UU4 A;  3TLS A;  4TWH A;  4QAC A;  2XYS A;  3LSV A;  4NPP A;  3T4M A;  2X00 A;  2XZ6 A;  5FJV A;  5HCJ A;  3ZDG A;  5J5I A;  2BG9 C;  2BYQ A;  4X5T A;  3WIP A;  2YOE A;  4BQT A;  4BFQ A;  2BG9 A;  4B5D A;  4TNV A;  5J5G A;  4ALX A;  3RI5 A;  4AFT A;  2X00 D;  3UU6 A;  2BYP A;  5CO5 A;  5IUX A;  2PGZ A;  3EI0 A;  2Y54 A;  4ZRU A;  4QAA A;  2BYS A;  2Y58 A;  4QAB A;  3RIA A;  5BP0 A;  3EHZ A;  2VL0 A;  4LMK A;  3WTN A;  4ILA A;  4EZ1 A;  4A97 A;  2ZJV A;  5AFM B;  3WTH A;  4ZJT A;  4D01 A;  4ZR6 A;  3P50 A;  2BG9 E;  3WTI A;  2XQ4 A;  5LXB A;  4LML A;  3WTJ A;  3GUA A;  3PEO A;  4ZJS A;  4IRE A;  5AFJ A;  3SQ9 A;  2XQ5 A;  2BYR A;  2Y57 A;  3TLU A;  2XYT A;  3UUB A;  3PMZ A;  5CFB A;  2ZJU A;  4HFI A;  4ZZB A;  5L47 A;  3UU3 A;  2XQ8 A;  5TVC A;  4HFH A;  3UQ7 A;  4TWF A;  2YKS A;  2XQ9 A;  4TWD A;  4UM3 P;  4AFG A;  3SIO A;  3U8L A;  4TNW A;  5AFN A;  4WV9 A;  4UM3 S;  3TLV A;  3JAF A;  4UXU A;  4NZB A;  2Y7Y A;  4XK9 A;  3SQ6 A;  4UY2 A;  1I9B A;  2XNV A;  4AFH A;  3U8M A;  3U8N A;  3JAD A;  3C84 A;  2WNC A;  5SYO A;  2BG9 B;  4ZK4 A;  3SH1 A;  3ZKR A;  4ILC A;  3RHW A;  2XZ5 A;  2BR8 A;  3P4W A;  1UV6 A;  5BW2 A;  4Z91 A;  3TLT A;  3WTO A;  3U8K A;  5HEJ A;  4LMJ A;  3JAE A;  5BRX A;  2XNU A;  5AFK A;  4COF A;  2XQ6 A;  4ZZC A;  4IL4 A;  2YMD A;  3UU8 A;  5L4H A;  3C79 A;  2WNJ A; 
#chains in the Genus database with same CATH topology
 2XNT A;  4HQP A;  4HFC A;  3UU5 A;  2YME A;  5HEH A;  2XQA A;  4FRR A;  4HFD A;  4PIR A;  4ZK1 A;  4UM3 A;  2C9T A;  2BJ0 A;  2Y56 A;  4F8H A;  4QH1 A;  5AFH A;  4DBM A;  2WN9 A;  2WZY A;  3RIF A;  3ZDH A;  5AFM A;  4XHE A;  5AIN A;  5J0Z A;  5HEO A;  5HEG A;  3TLW A;  5J5H A;  5HCM A;  2XQ7 A;  3WTM A;  2W8F A;  3EAM A;  3RQU A;  5HEU A;  5LG3 A;  3WTL A;  4UM1 A;  5J5F A;  3UQ4 A;  5KZU A;  4HFE A;  2XQ3 A;  2YN6 A;  3WTK A;  4Z90 A;  4IL9 A;  5AFL A;  5L4E A;  1UX2 A;  2WNL A;  2BR7 A;  4ILB A;  2UZ6 A;  5JME A;  2BYN A;  3RQW A;  2W8G A;  4QH5 A;  1UW6 A;  2QC1 B;  3U8J A;  4A98 A;  2PH9 A;  4HFB A;  3IGQ A;  5KE4 A;  4QH4 A;  3UU4 A;  3TLS A;  4TWH A;  4QAC A;  2XYS A;  3LSV A;  4NPP A;  3T4M A;  2X00 A;  2XZ6 A;  5FJV A;  5HCJ A;  3ZDG A;  5J5I A;  2BG9 C;  2BYQ A;  4X5T A;  3WIP A;  2YOE A;  4BQT A;  4BFQ A;  2BG9 A;  4B5D A;  4TNV A;  5J5G A;  4ALX A;  3RI5 A;  4AFT A;  2X00 D;  3UU6 A;  2BYP A;  5CO5 A;  5IUX A;  2PGZ A;  3EI0 A;  2Y54 A;  4ZRU A;  4QAA A;  2BYS A;  2Y58 A;  4QAB A;  3RIA A;  5BP0 A;  3EHZ A;  2VL0 A;  4LMK A;  3WTN A;  4ILA A;  4EZ1 A;  4A97 A;  2ZJV A;  5AFM B;  3WTH A;  4ZJT A;  4D01 A;  4ZR6 A;  3P50 A;  2BG9 E;  3WTI A;  2XQ4 A;  5LXB A;  4LML A;  3WTJ A;  3GUA A;  3PEO A;  4ZJS A;  4IRE A;  5AFJ A;  3SQ9 A;  2XQ5 A;  2BYR A;  2Y57 A;  3TLU A;  2XYT A;  3UUB A;  3PMZ A;  5CFB A;  2ZJU A;  4HFI A;  4ZZB A;  5L47 A;  3UU3 A;  2XQ8 A;  5TVC A;  4HFH A;  3UQ7 A;  4TWF A;  2YKS A;  2XQ9 A;  4TWD A;  4UM3 P;  4AFG A;  3SIO A;  3U8L A;  4TNW A;  5AFN A;  4WV9 A;  4UM3 S;  3TLV A;  3JAF A;  4UXU A;  4NZB A;  2Y7Y A;  4XK9 A;  3SQ6 A;  4UY2 A;  1I9B A;  2XNV A;  4AFH A;  3U8M A;  3U8N A;  3JAD A;  3C84 A;  2WNC A;  5SYO A;  2BG9 B;  4ZK4 A;  3SH1 A;  3ZKR A;  4ILC A;  3RHW A;  2XZ5 A;  2BR8 A;  3P4W A;  1UV6 A;  5BW2 A;  4Z91 A;  3TLT A;  3WTO A;  3U8K A;  5HEJ A;  4LMJ A;  3JAE A;  5BRX A;  2XNU A;  5AFK A;  4COF A;  2XQ6 A;  4ZZC A;  4IL4 A;  2YMD A;  3UU8 A;  5L4H A;  3C79 A;  2WNJ A; 
#chains in the Genus database with same CATH homology
 2XNT A;  4HQP A;  4HFC A;  3UU5 A;  2YME A;  5HEH A;  2XQA A;  4FRR A;  4HFD A;  4PIR A;  4ZK1 A;  4UM3 A;  2C9T A;  2BJ0 A;  2Y56 A;  4F8H A;  4QH1 A;  5AFH A;  4DBM A;  2WN9 A;  2WZY A;  3RIF A;  3ZDH A;  5AFM A;  4XHE A;  5AIN A;  5J0Z A;  5HEO A;  5HEG A;  3TLW A;  5J5H A;  5HCM A;  2XQ7 A;  3WTM A;  2W8F A;  3EAM A;  3RQU A;  5HEU A;  5LG3 A;  3WTL A;  4UM1 A;  5J5F A;  3UQ4 A;  5KZU A;  4HFE A;  2XQ3 A;  2YN6 A;  3WTK A;  4Z90 A;  4IL9 A;  5AFL A;  5L4E A;  1UX2 A;  2WNL A;  2BR7 A;  4ILB A;  2UZ6 A;  5JME A;  2BYN A;  3RQW A;  2W8G A;  4QH5 A;  1UW6 A;  2QC1 B;  3U8J A;  4A98 A;  2PH9 A;  4HFB A;  3IGQ A;  5KE4 A;  4QH4 A;  3UU4 A;  3TLS A;  4TWH A;  4QAC A;  2XYS A;  3LSV A;  4NPP A;  3T4M A;  2X00 A;  2XZ6 A;  5FJV A;  5HCJ A;  3ZDG A;  5J5I A;  2BG9 C;  2BYQ A;  4X5T A;  3WIP A;  2YOE A;  4BQT A;  4BFQ A;  2BG9 A;  4B5D A;  4TNV A;  5J5G A;  4ALX A;  3RI5 A;  4AFT A;  2X00 D;  3UU6 A;  2BYP A;  5CO5 A;  5IUX A;  2PGZ A;  3EI0 A;  2Y54 A;  4ZRU A;  4QAA A;  2BYS A;  2Y58 A;  4QAB A;  3RIA A;  5BP0 A;  3EHZ A;  2VL0 A;  4LMK A;  3WTN A;  4ILA A;  4EZ1 A;  4A97 A;  2ZJV A;  5AFM B;  3WTH A;  4ZJT A;  4D01 A;  4ZR6 A;  3P50 A;  2BG9 E;  3WTI A;  2XQ4 A;  5LXB A;  4LML A;  3WTJ A;  3GUA A;  3PEO A;  4ZJS A;  4IRE A;  5AFJ A;  3SQ9 A;  2XQ5 A;  2BYR A;  2Y57 A;  3TLU A;  2XYT A;  3UUB A;  3PMZ A;  5CFB A;  2ZJU A;  4HFI A;  4ZZB A;  5L47 A;  3UU3 A;  2XQ8 A;  5TVC A;  4HFH A;  3UQ7 A;  4TWF A;  2YKS A;  2XQ9 A;  4TWD A;  4UM3 P;  4AFG A;  3SIO A;  3U8L A;  4TNW A;  5AFN A;  4WV9 A;  4UM3 S;  3TLV A;  3JAF A;  4UXU A;  4NZB A;  2Y7Y A;  4XK9 A;  3SQ6 A;  4UY2 A;  1I9B A;  2XNV A;  4AFH A;  3U8M A;  3U8N A;  3JAD A;  3C84 A;  2WNC A;  5SYO A;  2BG9 B;  4ZK4 A;  3SH1 A;  3ZKR A;  4ILC A;  3RHW A;  2XZ5 A;  2BR8 A;  3P4W A;  1UV6 A;  5BW2 A;  4Z91 A;  3TLT A;  3WTO A;  3U8K A;  5HEJ A;  4LMJ A;  3JAE A;  5BRX A;  2XNU A;  5AFK A;  4COF A;  2XQ6 A;  4ZZC A;  4IL4 A;  2YMD A;  3UU8 A;  5L4H A;  3C79 A;  2WNJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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