4NZBA

Ns9283 bound to ls-achbp
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
204
structure length
198
Chain Sequence
LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Acetylcholine-binding protein
publication title Structural and Functional Studies of the Modulator NS9283 Reveal Agonist-Like Mechanism of Action at alpha4beta2 Nicotinic Acetylcholine Receptors
doi rcsb
molecule keywords Acetylcholine-binding protein
total genus 47
structure length 198
sequence length 204
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O
ec nomenclature
pdb deposition date 2013-12-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4nzbA00
2QC1B 4ALXA 2YMDA 2BYPA 2XNVA 3RQWA 5J0ZA 2YKSA 3WTJA 3UQ7A 3P50A 4PIRA 5SYOA 2Y57A 3WTIA 2Y56A 2XZ6A 5AFNA 5J5HA 5L47A 2VL0A 4HFIA 2BYSA 4UXUA 3ZKRA 3RIFA 4X5TA 2XQ9A 5AFJA 5HCMA 4Z90A 3C84A 2XYTA 3P4WA 4AFHA 3U8JA 2C9TA 3ZDGA 4IL9A 3T4MA 4DBMA 5HEOA 3PEOA 3WTMA 4WV9A 4AFTA 2WNJA 5BP0A 4QAAA 3C79A 4A97A 4UM3S 2Y54A 4IREA 2BYRA 4ILCA 5IUXA 4EZ1A 3RIAA 2BR8A 3U8KA 5HEHA 2X00D 2XQ8A 4ILAA 5HCJA 4UY2A 5LXBA 3SQ6A 3RQUA 2ZJVA 3SH1A 4B5DA 4XHEA 2BR7A 2XQ5A 2BG9E 2BG9B 5J5IA 3SIOA 4HFCA 5AFLA 2Y7YA 5J5FA 5AFHA 2XNTA 5AINA 5BRXA 2BG9C 4HFDA 4HFHA 5J5GA 5CO5A 2YMEA 2XNUA 4ZK1A 3EAMA 4D01A 5HEUA 5HEGA 2XQ3A 2W8FA 3U8LA 1UV6A 3JADA 3ZDHA 4TWHA 3WTLA 4LMJA 4ZJTA 5BW2A 3TLUA 4XK9A 3TLWA 3WIPA 2PGZA 3LSVA 4COFA 3EI0A 4ZZBA 4QH5A 4UM3A 3UU5A 2W8GA 3WTKA 5AFKA 4ZZCA 2WN9A 3PMZA 5AFMB 2BJ0A 4IL4A 3TLTA 3UU6A 3GUAA 4FRRA 3UU4A 4TWFA 4ZJSA 3UQ4A 5LG3A 3IGQA 4HFEA 4QACA 2BYQA 3RI5A 4ILBA 2PH9A 4A98A 3UU3A 2XQ6A 2XQ4A 3JAEA 4TNWA 2WNLA 5CFBA 4ZK4A 3U8NA 3WTOA 5L4EA 2WNCA 5JMEA 4NZBA 4Z91A 1UW6A 5HEJA 3TLVA 4ZR6A 4QH4A 5FJVA 3UU8A 4QH1A 2UZ6A 2XQAA 4NPPA 4BQTA 5TVCA 2YN6A 2YOEA 3UUBA 4QABA 4LMKA 3JAFA 4BFQA 4F8HA 3EHZA 4TWDA 3U8MA 3WTHA 4HQPA 4HFBA 1UX2A 2X00A 3WTNA 5AFMA 3SQ9A 4LMLA 4UM1A 2Y58A 2XYSA 3TLSA 4AFGA 4UM3P 2BG9A 4TNVA 5KZUA 2BYNA 2WZYA 2ZJUA 3RHWA 5L4HA 2XQ7A 4ZRUA 2XZ5A 5KE4A 1I9BA
chains in the Genus database with same CATH superfamily
2QC1B 4ALXA 2YMDA 2BYPA 2XNVA 3RQWA 5J0ZA 2YKSA 3WTJA 3UQ7A 3P50A 4PIRA 5SYOA 2Y57A 3WTIA 2Y56A 2XZ6A 5AFNA 5J5HA 5L47A 2VL0A 4HFIA 2BYSA 4UXUA 3ZKRA 3RIFA 4X5TA 2XQ9A 5AFJA 5HCMA 4Z90A 3C84A 2XYTA 3P4WA 4AFHA 3U8JA 2C9TA 3ZDGA 4IL9A 3T4MA 4DBMA 5HEOA 3PEOA 3WTMA 4WV9A 4AFTA 2WNJA 5BP0A 4QAAA 3C79A 4A97A 4UM3S 2Y54A 4IREA 2BYRA 4ILCA 5IUXA 4EZ1A 3RIAA 2BR8A 3U8KA 5HEHA 2X00D 2XQ8A 4ILAA 5HCJA 4UY2A 5LXBA 3SQ6A 3RQUA 2ZJVA 3SH1A 4B5DA 4XHEA 2BR7A 2XQ5A 2BG9E 2BG9B 5J5IA 3SIOA 4HFCA 5AFLA 2Y7YA 5J5FA 5AFHA 2XNTA 5AINA 5BRXA 2BG9C 4HFDA 4HFHA 5J5GA 5CO5A 2YMEA 2XNUA 4ZK1A 3EAMA 4D01A 5HEUA 5HEGA 2XQ3A 2W8FA 3U8LA 1UV6A 3JADA 3ZDHA 4TWHA 3WTLA 4LMJA 4ZJTA 5BW2A 3TLUA 4XK9A 3TLWA 3WIPA 2PGZA 3LSVA 4COFA 3EI0A 4ZZBA 4QH5A 4UM3A 3UU5A 2W8GA 3WTKA 5AFKA 4ZZCA 2WN9A 3PMZA 5AFMB 2BJ0A 4IL4A 3TLTA 3UU6A 3GUAA 4FRRA 3UU4A 4TWFA 4ZJSA 3UQ4A 5LG3A 3IGQA 4HFEA 4QACA 2BYQA 3RI5A 4ILBA 2PH9A 4A98A 3UU3A 2XQ6A 2XQ4A 3JAEA 4TNWA 2WNLA 5CFBA 4ZK4A 3U8NA 3WTOA 5L4EA 2WNCA 5JMEA 4NZBA 4Z91A 1UW6A 5HEJA 3TLVA 4ZR6A 4QH4A 5FJVA 3UU8A 4QH1A 2UZ6A 2XQAA 4NPPA 4BQTA 5TVCA 2YN6A 2YOEA 3UUBA 4QABA 4LMKA 3JAFA 4BFQA 4F8HA 3EHZA 4TWDA 3U8MA 3WTHA 4HQPA 4HFBA 1UX2A 2X00A 3WTNA 5AFMA 3SQ9A 4LMLA 4UM1A 2Y58A 2XYSA 3TLSA 4AFGA 4UM3P 2BG9A 4TNVA 5KZUA 2BYNA 2WZYA 2ZJUA 3RHWA 5L4HA 2XQ7A 4ZRUA 2XZ5A 5KE4A 1I9BA
chains in the Genus database with same CATH topology
2QC1B 4ALXA 2YMDA 2BYPA 2XNVA 3RQWA 5J0ZA 2YKSA 3WTJA 3UQ7A 3P50A 4PIRA 5SYOA 2Y57A 3WTIA 2Y56A 2XZ6A 5AFNA 5J5HA 5L47A 2VL0A 4HFIA 2BYSA 4UXUA 3ZKRA 3RIFA 4X5TA 2XQ9A 5AFJA 5HCMA 4Z90A 3C84A 2XYTA 3P4WA 4AFHA 3U8JA 2C9TA 3ZDGA 4IL9A 3T4MA 4DBMA 5HEOA 3PEOA 3WTMA 4WV9A 4AFTA 2WNJA 5BP0A 4QAAA 3C79A 4A97A 4UM3S 2Y54A 4IREA 2BYRA 4ILCA 5IUXA 4EZ1A 3RIAA 2BR8A 3U8KA 5HEHA 2X00D 2XQ8A 4ILAA 5HCJA 4UY2A 5LXBA 3SQ6A 3RQUA 2ZJVA 3SH1A 4B5DA 4XHEA 2BR7A 2XQ5A 2BG9E 2BG9B 5J5IA 3SIOA 4HFCA 5AFLA 2Y7YA 5J5FA 5AFHA 2XNTA 5AINA 5BRXA 2BG9C 4HFDA 4HFHA 5J5GA 5CO5A 2YMEA 2XNUA 4ZK1A 3EAMA 4D01A 5HEUA 5HEGA 2XQ3A 2W8FA 3U8LA 1UV6A 3JADA 3ZDHA 4TWHA 3WTLA 4LMJA 4ZJTA 5BW2A 3TLUA 4XK9A 3TLWA 3WIPA 2PGZA 3LSVA 4COFA 3EI0A 4ZZBA 4QH5A 4UM3A 3UU5A 2W8GA 3WTKA 5AFKA 4ZZCA 2WN9A 3PMZA 5AFMB 2BJ0A 4IL4A 3TLTA 3UU6A 3GUAA 4FRRA 3UU4A 4TWFA 4ZJSA 3UQ4A 5LG3A 3IGQA 4HFEA 4QACA 2BYQA 3RI5A 4ILBA 2PH9A 4A98A 3UU3A 2XQ6A 2XQ4A 3JAEA 4TNWA 2WNLA 5CFBA 4ZK4A 3U8NA 3WTOA 5L4EA 2WNCA 5JMEA 4NZBA 4Z91A 1UW6A 5HEJA 3TLVA 4ZR6A 4QH4A 5FJVA 3UU8A 4QH1A 2UZ6A 2XQAA 4NPPA 4BQTA 5TVCA 2YN6A 2YOEA 3UUBA 4QABA 4LMKA 3JAFA 4BFQA 4F8HA 3EHZA 4TWDA 3U8MA 3WTHA 4HQPA 4HFBA 1UX2A 2X00A 3WTNA 5AFMA 3SQ9A 4LMLA 4UM1A 2Y58A 2XYSA 3TLSA 4AFGA 4UM3P 2BG9A 4TNVA 5KZUA 2BYNA 2WZYA 2ZJUA 3RHWA 5L4HA 2XQ7A 4ZRUA 2XZ5A 5KE4A 1I9BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QC1 B;  4ALX A;  2YMD A;  2BYP A;  2XNV A;  3RQW A;  5J0Z A;  2YKS A;  3WTJ A;  3UQ7 A;  3P50 A;  4PIR A;  5SYO A;  2Y57 A;  3WTI A;  2Y56 A;  2XZ6 A;  5AFN A;  5J5H A;  5L47 A;  2VL0 A;  4HFI A;  2BYS A;  4UXU A;  3ZKR A;  3RIF A;  4X5T A;  2XQ9 A;  5AFJ A;  5HCM A;  4Z90 A;  3C84 A;  2XYT A;  3P4W A;  4AFH A;  3U8J A;  2C9T A;  3ZDG A;  4IL9 A;  3T4M A;  4DBM A;  5HEO A;  3PEO A;  3WTM A;  4WV9 A;  4AFT A;  2WNJ A;  5BP0 A;  4QAA A;  3C79 A;  4A97 A;  4UM3 S;  2Y54 A;  4IRE A;  2BYR A;  4ILC A;  5IUX A;  4EZ1 A;  3RIA A;  2BR8 A;  3U8K A;  5HEH A;  2X00 D;  2XQ8 A;  4ILA A;  5HCJ A;  4UY2 A;  5LXB A;  3SQ6 A;  3RQU A;  2ZJV A;  3SH1 A;  4B5D A;  4XHE A;  2BR7 A;  2XQ5 A;  2BG9 E;  2BG9 B;  5J5I A;  3SIO A;  4HFC A;  5AFL A;  2Y7Y A;  5J5F A;  5AFH A;  2XNT A;  5AIN A;  5BRX A;  2BG9 C;  4HFD A;  4HFH A;  5J5G A;  5CO5 A;  2YME A;  2XNU A;  4ZK1 A;  3EAM A;  4D01 A;  5HEU A;  5HEG A;  2XQ3 A;  2W8F A;  3U8L A;  1UV6 A;  3JAD A;  3ZDH A;  4TWH A;  3WTL A;  4LMJ A;  4ZJT A;  5BW2 A;  3TLU A;  4XK9 A;  3TLW A;  3WIP A;  2PGZ A;  3LSV A;  4COF A;  3EI0 A;  4ZZB A;  4QH5 A;  4UM3 A;  3UU5 A;  2W8G A;  3WTK A;  5AFK A;  4ZZC A;  2WN9 A;  3PMZ A;  5AFM B;  2BJ0 A;  4IL4 A;  3TLT A;  3UU6 A;  3GUA A;  4FRR A;  3UU4 A;  4TWF A;  4ZJS A;  3UQ4 A;  5LG3 A;  3IGQ A;  4HFE A;  4QAC A;  2BYQ A;  3RI5 A;  4ILB A;  2PH9 A;  4A98 A;  3UU3 A;  2XQ6 A;  2XQ4 A;  3JAE A;  4TNW A;  2WNL A;  5CFB A;  4ZK4 A;  3U8N A;  3WTO A;  5L4E A;  2WNC A;  5JME A;  4NZB A;  4Z91 A;  1UW6 A;  5HEJ A;  3TLV A;  4ZR6 A;  4QH4 A;  5FJV A;  3UU8 A;  4QH1 A;  2UZ6 A;  2XQA A;  4NPP A;  4BQT A;  5TVC A;  2YN6 A;  2YOE A;  3UUB A;  4QAB A;  4LMK A;  3JAF A;  4BFQ A;  4F8H A;  3EHZ A;  4TWD A;  3U8M A;  3WTH A;  4HQP A;  4HFB A;  1UX2 A;  2X00 A;  3WTN A;  5AFM A;  3SQ9 A;  4LML A;  4UM1 A;  2Y58 A;  2XYS A;  3TLS A;  4AFG A;  4UM3 P;  2BG9 A;  4TNV A;  5KZU A;  2BYN A;  2WZY A;  2ZJU A;  3RHW A;  5L4H A;  2XQ7 A;  4ZRU A;  2XZ5 A;  5KE4 A;  1I9B A; 
#chains in the Genus database with same CATH topology
 2QC1 B;  4ALX A;  2YMD A;  2BYP A;  2XNV A;  3RQW A;  5J0Z A;  2YKS A;  3WTJ A;  3UQ7 A;  3P50 A;  4PIR A;  5SYO A;  2Y57 A;  3WTI A;  2Y56 A;  2XZ6 A;  5AFN A;  5J5H A;  5L47 A;  2VL0 A;  4HFI A;  2BYS A;  4UXU A;  3ZKR A;  3RIF A;  4X5T A;  2XQ9 A;  5AFJ A;  5HCM A;  4Z90 A;  3C84 A;  2XYT A;  3P4W A;  4AFH A;  3U8J A;  2C9T A;  3ZDG A;  4IL9 A;  3T4M A;  4DBM A;  5HEO A;  3PEO A;  3WTM A;  4WV9 A;  4AFT A;  2WNJ A;  5BP0 A;  4QAA A;  3C79 A;  4A97 A;  4UM3 S;  2Y54 A;  4IRE A;  2BYR A;  4ILC A;  5IUX A;  4EZ1 A;  3RIA A;  2BR8 A;  3U8K A;  5HEH A;  2X00 D;  2XQ8 A;  4ILA A;  5HCJ A;  4UY2 A;  5LXB A;  3SQ6 A;  3RQU A;  2ZJV A;  3SH1 A;  4B5D A;  4XHE A;  2BR7 A;  2XQ5 A;  2BG9 E;  2BG9 B;  5J5I A;  3SIO A;  4HFC A;  5AFL A;  2Y7Y A;  5J5F A;  5AFH A;  2XNT A;  5AIN A;  5BRX A;  2BG9 C;  4HFD A;  4HFH A;  5J5G A;  5CO5 A;  2YME A;  2XNU A;  4ZK1 A;  3EAM A;  4D01 A;  5HEU A;  5HEG A;  2XQ3 A;  2W8F A;  3U8L A;  1UV6 A;  3JAD A;  3ZDH A;  4TWH A;  3WTL A;  4LMJ A;  4ZJT A;  5BW2 A;  3TLU A;  4XK9 A;  3TLW A;  3WIP A;  2PGZ A;  3LSV A;  4COF A;  3EI0 A;  4ZZB A;  4QH5 A;  4UM3 A;  3UU5 A;  2W8G A;  3WTK A;  5AFK A;  4ZZC A;  2WN9 A;  3PMZ A;  5AFM B;  2BJ0 A;  4IL4 A;  3TLT A;  3UU6 A;  3GUA A;  4FRR A;  3UU4 A;  4TWF A;  4ZJS A;  3UQ4 A;  5LG3 A;  3IGQ A;  4HFE A;  4QAC A;  2BYQ A;  3RI5 A;  4ILB A;  2PH9 A;  4A98 A;  3UU3 A;  2XQ6 A;  2XQ4 A;  3JAE A;  4TNW A;  2WNL A;  5CFB A;  4ZK4 A;  3U8N A;  3WTO A;  5L4E A;  2WNC A;  5JME A;  4NZB A;  4Z91 A;  1UW6 A;  5HEJ A;  3TLV A;  4ZR6 A;  4QH4 A;  5FJV A;  3UU8 A;  4QH1 A;  2UZ6 A;  2XQA A;  4NPP A;  4BQT A;  5TVC A;  2YN6 A;  2YOE A;  3UUB A;  4QAB A;  4LMK A;  3JAF A;  4BFQ A;  4F8H A;  3EHZ A;  4TWD A;  3U8M A;  3WTH A;  4HQP A;  4HFB A;  1UX2 A;  2X00 A;  3WTN A;  5AFM A;  3SQ9 A;  4LML A;  4UM1 A;  2Y58 A;  2XYS A;  3TLS A;  4AFG A;  4UM3 P;  2BG9 A;  4TNV A;  5KZU A;  2BYN A;  2WZY A;  2ZJU A;  3RHW A;  5L4H A;  2XQ7 A;  4ZRU A;  2XZ5 A;  5KE4 A;  1I9B A; 
#chains in the Genus database with same CATH homology
 2QC1 B;  4ALX A;  2YMD A;  2BYP A;  2XNV A;  3RQW A;  5J0Z A;  2YKS A;  3WTJ A;  3UQ7 A;  3P50 A;  4PIR A;  5SYO A;  2Y57 A;  3WTI A;  2Y56 A;  2XZ6 A;  5AFN A;  5J5H A;  5L47 A;  2VL0 A;  4HFI A;  2BYS A;  4UXU A;  3ZKR A;  3RIF A;  4X5T A;  2XQ9 A;  5AFJ A;  5HCM A;  4Z90 A;  3C84 A;  2XYT A;  3P4W A;  4AFH A;  3U8J A;  2C9T A;  3ZDG A;  4IL9 A;  3T4M A;  4DBM A;  5HEO A;  3PEO A;  3WTM A;  4WV9 A;  4AFT A;  2WNJ A;  5BP0 A;  4QAA A;  3C79 A;  4A97 A;  4UM3 S;  2Y54 A;  4IRE A;  2BYR A;  4ILC A;  5IUX A;  4EZ1 A;  3RIA A;  2BR8 A;  3U8K A;  5HEH A;  2X00 D;  2XQ8 A;  4ILA A;  5HCJ A;  4UY2 A;  5LXB A;  3SQ6 A;  3RQU A;  2ZJV A;  3SH1 A;  4B5D A;  4XHE A;  2BR7 A;  2XQ5 A;  2BG9 E;  2BG9 B;  5J5I A;  3SIO A;  4HFC A;  5AFL A;  2Y7Y A;  5J5F A;  5AFH A;  2XNT A;  5AIN A;  5BRX A;  2BG9 C;  4HFD A;  4HFH A;  5J5G A;  5CO5 A;  2YME A;  2XNU A;  4ZK1 A;  3EAM A;  4D01 A;  5HEU A;  5HEG A;  2XQ3 A;  2W8F A;  3U8L A;  1UV6 A;  3JAD A;  3ZDH A;  4TWH A;  3WTL A;  4LMJ A;  4ZJT A;  5BW2 A;  3TLU A;  4XK9 A;  3TLW A;  3WIP A;  2PGZ A;  3LSV A;  4COF A;  3EI0 A;  4ZZB A;  4QH5 A;  4UM3 A;  3UU5 A;  2W8G A;  3WTK A;  5AFK A;  4ZZC A;  2WN9 A;  3PMZ A;  5AFM B;  2BJ0 A;  4IL4 A;  3TLT A;  3UU6 A;  3GUA A;  4FRR A;  3UU4 A;  4TWF A;  4ZJS A;  3UQ4 A;  5LG3 A;  3IGQ A;  4HFE A;  4QAC A;  2BYQ A;  3RI5 A;  4ILB A;  2PH9 A;  4A98 A;  3UU3 A;  2XQ6 A;  2XQ4 A;  3JAE A;  4TNW A;  2WNL A;  5CFB A;  4ZK4 A;  3U8N A;  3WTO A;  5L4E A;  2WNC A;  5JME A;  4NZB A;  4Z91 A;  1UW6 A;  5HEJ A;  3TLV A;  4ZR6 A;  4QH4 A;  5FJV A;  3UU8 A;  4QH1 A;  2UZ6 A;  2XQA A;  4NPP A;  4BQT A;  5TVC A;  2YN6 A;  2YOE A;  3UUB A;  4QAB A;  4LMK A;  3JAF A;  4BFQ A;  4F8H A;  3EHZ A;  4TWD A;  3U8M A;  3WTH A;  4HQP A;  4HFB A;  1UX2 A;  2X00 A;  3WTN A;  5AFM A;  3SQ9 A;  4LML A;  4UM1 A;  2Y58 A;  2XYS A;  3TLS A;  4AFG A;  4UM3 P;  2BG9 A;  4TNV A;  5KZU A;  2BYN A;  2WZY A;  2ZJU A;  3RHW A;  5L4H A;  2XQ7 A;  4ZRU A;  2XZ5 A;  5KE4 A;  1I9B A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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