4NZBA

Ns9283 bound to ls-achbp
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
204
structure length
198
Chain Sequence
b'LDRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural and Functional Studies of the Modulator NS9283 Reveal Agonist-Like Mechanism of Action at alpha4beta2 Nicotinic Acetylcholine Receptors
doi rcsb
molecule keywords Acetylcholine-binding protein
molecule tags Acetylcholine-binding protein
total genus 47
structure length 198
sequence length 204
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O
ec nomenclature
pdb deposition date 2013-12-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4nzbA00
2WNCA 4NPPA 5HEJA 4ZJTA 3JADA 3P50A 5AFNA 5KE4A 4WV9A 3UU6A 5HEOA 2W8FA 2X00A 5KZUA 4AFTA 4QABA 5L4EA 4UM3P 3TLTA 4BQTA 2XYSA 5TVCA 2W8GA 4PIRA 3LSVA 5L47A 2BR7A 2BR8A 3WTHA 4UXUA 2YMEA 2BG9C 5J5FA 2WNLA 4XHEA 2YMDA 4HFIA 3TLSA 2BYNA 3PMZA 5FJVA 3ZDHA 4ZK4A 4IL4A 5HEGA 5HCJA 2BJ0A 3PEOA 4HFDA 4UM3S 5J5HA 3EI0A 2XQAA 4ZRUA 4ZZBA 3C84A 3WTLA 2XQ9A 4HFEA 3WTOA 4ZZCA 4TNWA 3P4WA 4QACA 2Y58A 5J5IA 3UU4A 4Z90A 4B5DA 1I9BA 2YKSA 2BYQA 3IGQA 4ILBA 5AFJA 5LG3A 4AFHA 2WN9A 4X5TA 2XNUA 2WNJA 3UU3A 2XZ6A 2XNTA 4FRRA 5SYOA 4Z91A 4A98A 5AFMA 5IUXA 2BG9A 3WTKA 3U8MA 5CFBA 3RQUA 3RHWA 2YOEA 2XQ6A 5L4HA 4HFCA 3WTNA 2ZJUA 3RIFA 2XYTA 4QH4A 3WTMA 4UY2A 3SH1A 3UU5A 4LMKA 2BG9E 4COFA 3WIPA 4ZK1A 3RIAA 3UQ4A 2YN6A 4EZ1A 2Y56A 2PGZA 2ZJVA 5AFLA 2XNVA 1UV6A 4QH5A 4QH1A 3RQWA 3SQ6A 5HEHA 3RI5A 4AFGA 3U8JA 3GUAA 1UX2A 2XQ7A 2BYRA 3EHZA 4ALXA 4ILAA 4UM3A 3ZDGA 4D01A 3C79A 5AFMB 2BG9B 3UQ7A 4HQPA 4TWDA 3TLUA 5AFHA 4IREA 4TNVA 5HCMA 2XQ5A 4TWHA 3JAFA 2Y54A 4XK9A 3U8KA 2X00D 2VL0A 3U8LA 4F8HA 3SIOA 2XQ4A 2XZ5A 3UUBA 2UZ6A 5AFKA 2BYSA 3ZKRA 4A97A 5BW2A 5JMEA 3SQ9A 4ILCA 2XQ3A 2PH9A 4TWFA 2Y7YA 5BRXA 4HFBA 3JAEA 2XQ8A 2BYPA 2WZYA 5BP0A 3TLWA 1UW6A 5AINA 4UM1A 4BFQA 4LMJA 2QC1B 3WTJA 5J0ZA 2Y57A 4QAAA 4IL9A 3WTIA 5CO5A 3UU8A 3U8NA 3TLVA 4LMLA 5HEUA 2C9TA 4NZBA 4HFHA 4DBMA 5J5GA 3T4MA 3EAMA 4ZJSA 4ZR6A 5LXBA
chains in the Genus database with same CATH superfamily
2WNCA 4NPPA 5HEJA 4ZJTA 3JADA 3P50A 5AFNA 5KE4A 4WV9A 3UU6A 5HEOA 2W8FA 2X00A 5KZUA 4AFTA 4QABA 5L4EA 4UM3P 3TLTA 4BQTA 2XYSA 5TVCA 2W8GA 4PIRA 3LSVA 5L47A 2BR7A 2BR8A 3WTHA 4UXUA 2YMEA 2BG9C 5J5FA 2WNLA 4XHEA 2YMDA 4HFIA 3TLSA 2BYNA 3PMZA 5FJVA 3ZDHA 4ZK4A 4IL4A 5HEGA 5HCJA 2BJ0A 3PEOA 4HFDA 4UM3S 5J5HA 3EI0A 2XQAA 4ZRUA 4ZZBA 3C84A 3WTLA 2XQ9A 4HFEA 3WTOA 4ZZCA 4TNWA 3P4WA 4QACA 2Y58A 5J5IA 3UU4A 4Z90A 4B5DA 1I9BA 2YKSA 2BYQA 3IGQA 4ILBA 5AFJA 5LG3A 4AFHA 2WN9A 4X5TA 2XNUA 2WNJA 3UU3A 2XZ6A 2XNTA 4FRRA 5SYOA 4Z91A 4A98A 5AFMA 5IUXA 2BG9A 3WTKA 3U8MA 5CFBA 3RQUA 3RHWA 2YOEA 2XQ6A 5L4HA 4HFCA 3WTNA 2ZJUA 3RIFA 2XYTA 4QH4A 3WTMA 4UY2A 3SH1A 3UU5A 4LMKA 2BG9E 4COFA 3WIPA 4ZK1A 3RIAA 3UQ4A 2YN6A 4EZ1A 2Y56A 2PGZA 2ZJVA 5AFLA 2XNVA 1UV6A 4QH5A 4QH1A 3RQWA 3SQ6A 5HEHA 3RI5A 4AFGA 3U8JA 3GUAA 1UX2A 2XQ7A 2BYRA 3EHZA 4ALXA 4ILAA 4UM3A 3ZDGA 4D01A 3C79A 5AFMB 2BG9B 3UQ7A 4HQPA 4TWDA 3TLUA 5AFHA 4IREA 4TNVA 5HCMA 2XQ5A 4TWHA 3JAFA 2Y54A 4XK9A 3U8KA 2X00D 2VL0A 3U8LA 4F8HA 3SIOA 2XQ4A 2XZ5A 3UUBA 2UZ6A 5AFKA 2BYSA 3ZKRA 4A97A 5BW2A 5JMEA 3SQ9A 4ILCA 2XQ3A 2PH9A 4TWFA 2Y7YA 5BRXA 4HFBA 3JAEA 2XQ8A 2BYPA 2WZYA 5BP0A 3TLWA 1UW6A 5AINA 4UM1A 4BFQA 4LMJA 2QC1B 3WTJA 5J0ZA 2Y57A 4QAAA 4IL9A 3WTIA 5CO5A 3UU8A 3U8NA 3TLVA 4LMLA 5HEUA 2C9TA 4NZBA 4HFHA 4DBMA 5J5GA 3T4MA 3EAMA 4ZJSA 4ZR6A 5LXBA
chains in the Genus database with same CATH topology
2WNCA 4NPPA 5HEJA 4ZJTA 3JADA 3P50A 5AFNA 5KE4A 4WV9A 3UU6A 5HEOA 2W8FA 2X00A 5KZUA 4AFTA 4QABA 5L4EA 4UM3P 3TLTA 4BQTA 2XYSA 5TVCA 2W8GA 4PIRA 3LSVA 5L47A 2BR7A 2BR8A 3WTHA 4UXUA 2YMEA 2BG9C 5J5FA 2WNLA 4XHEA 2YMDA 4HFIA 3TLSA 2BYNA 3PMZA 5FJVA 3ZDHA 4ZK4A 4IL4A 5HEGA 5HCJA 2BJ0A 3PEOA 4HFDA 4UM3S 5J5HA 3EI0A 2XQAA 4ZRUA 4ZZBA 3C84A 3WTLA 2XQ9A 4HFEA 3WTOA 4ZZCA 4TNWA 3P4WA 4QACA 2Y58A 5J5IA 3UU4A 4Z90A 4B5DA 1I9BA 2YKSA 2BYQA 3IGQA 4ILBA 5AFJA 5LG3A 4AFHA 2WN9A 4X5TA 2XNUA 2WNJA 3UU3A 2XZ6A 2XNTA 4FRRA 5SYOA 4Z91A 4A98A 5AFMA 5IUXA 2BG9A 3WTKA 3U8MA 5CFBA 3RQUA 3RHWA 2YOEA 2XQ6A 5L4HA 4HFCA 3WTNA 2ZJUA 3RIFA 2XYTA 4QH4A 3WTMA 4UY2A 3SH1A 3UU5A 4LMKA 2BG9E 4COFA 3WIPA 4ZK1A 3RIAA 3UQ4A 2YN6A 4EZ1A 2Y56A 2PGZA 2ZJVA 5AFLA 2XNVA 1UV6A 4QH5A 4QH1A 3RQWA 3SQ6A 5HEHA 3RI5A 4AFGA 3U8JA 3GUAA 1UX2A 2XQ7A 2BYRA 3EHZA 4ALXA 4ILAA 4UM3A 3ZDGA 4D01A 3C79A 5AFMB 2BG9B 3UQ7A 4HQPA 4TWDA 3TLUA 5AFHA 4IREA 4TNVA 5HCMA 2XQ5A 4TWHA 3JAFA 2Y54A 4XK9A 3U8KA 2X00D 2VL0A 3U8LA 4F8HA 3SIOA 2XQ4A 2XZ5A 3UUBA 2UZ6A 5AFKA 2BYSA 3ZKRA 4A97A 5BW2A 5JMEA 3SQ9A 4ILCA 2XQ3A 2PH9A 4TWFA 2Y7YA 5BRXA 4HFBA 3JAEA 2XQ8A 2BYPA 2WZYA 5BP0A 3TLWA 1UW6A 5AINA 4UM1A 4BFQA 4LMJA 2QC1B 3WTJA 5J0ZA 2Y57A 4QAAA 4IL9A 3WTIA 5CO5A 3UU8A 3U8NA 3TLVA 4LMLA 5HEUA 2C9TA 4NZBA 4HFHA 4DBMA 5J5GA 3T4MA 3EAMA 4ZJSA 4ZR6A 5LXBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WNC A;  4NPP A;  5HEJ A;  4ZJT A;  3JAD A;  3P50 A;  5AFN A;  5KE4 A;  4WV9 A;  3UU6 A;  5HEO A;  2W8F A;  2X00 A;  5KZU A;  4AFT A;  4QAB A;  5L4E A;  4UM3 P;  3TLT A;  4BQT A;  2XYS A;  5TVC A;  2W8G A;  4PIR A;  3LSV A;  5L47 A;  2BR7 A;  2BR8 A;  3WTH A;  4UXU A;  2YME A;  2BG9 C;  5J5F A;  2WNL A;  4XHE A;  2YMD A;  4HFI A;  3TLS A;  2BYN A;  3PMZ A;  5FJV A;  3ZDH A;  4ZK4 A;  4IL4 A;  5HEG A;  5HCJ A;  2BJ0 A;  3PEO A;  4HFD A;  4UM3 S;  5J5H A;  3EI0 A;  2XQA A;  4ZRU A;  4ZZB A;  3C84 A;  3WTL A;  2XQ9 A;  4HFE A;  3WTO A;  4ZZC A;  4TNW A;  3P4W A;  4QAC A;  2Y58 A;  5J5I A;  3UU4 A;  4Z90 A;  4B5D A;  1I9B A;  2YKS A;  2BYQ A;  3IGQ A;  4ILB A;  5AFJ A;  5LG3 A;  4AFH A;  2WN9 A;  4X5T A;  2XNU A;  2WNJ A;  3UU3 A;  2XZ6 A;  2XNT A;  4FRR A;  5SYO A;  4Z91 A;  4A98 A;  5AFM A;  5IUX A;  2BG9 A;  3WTK A;  3U8M A;  5CFB A;  3RQU A;  3RHW A;  2YOE A;  2XQ6 A;  5L4H A;  4HFC A;  3WTN A;  2ZJU A;  3RIF A;  2XYT A;  4QH4 A;  3WTM A;  4UY2 A;  3SH1 A;  3UU5 A;  4LMK A;  2BG9 E;  4COF A;  3WIP A;  4ZK1 A;  3RIA A;  3UQ4 A;  2YN6 A;  4EZ1 A;  2Y56 A;  2PGZ A;  2ZJV A;  5AFL A;  2XNV A;  1UV6 A;  4QH5 A;  4QH1 A;  3RQW A;  3SQ6 A;  5HEH A;  3RI5 A;  4AFG A;  3U8J A;  3GUA A;  1UX2 A;  2XQ7 A;  2BYR A;  3EHZ A;  4ALX A;  4ILA A;  4UM3 A;  3ZDG A;  4D01 A;  3C79 A;  5AFM B;  2BG9 B;  3UQ7 A;  4HQP A;  4TWD A;  3TLU A;  5AFH A;  4IRE A;  4TNV A;  5HCM A;  2XQ5 A;  4TWH A;  3JAF A;  2Y54 A;  4XK9 A;  3U8K A;  2X00 D;  2VL0 A;  3U8L A;  4F8H A;  3SIO A;  2XQ4 A;  2XZ5 A;  3UUB A;  2UZ6 A;  5AFK A;  2BYS A;  3ZKR A;  4A97 A;  5BW2 A;  5JME A;  3SQ9 A;  4ILC A;  2XQ3 A;  2PH9 A;  4TWF A;  2Y7Y A;  5BRX A;  4HFB A;  3JAE A;  2XQ8 A;  2BYP A;  2WZY A;  5BP0 A;  3TLW A;  1UW6 A;  5AIN A;  4UM1 A;  4BFQ A;  4LMJ A;  2QC1 B;  3WTJ A;  5J0Z A;  2Y57 A;  4QAA A;  4IL9 A;  3WTI A;  5CO5 A;  3UU8 A;  3U8N A;  3TLV A;  4LML A;  5HEU A;  2C9T A;  4NZB A;  4HFH A;  4DBM A;  5J5G A;  3T4M A;  3EAM A;  4ZJS A;  4ZR6 A;  5LXB A; 
#chains in the Genus database with same CATH topology
 2WNC A;  4NPP A;  5HEJ A;  4ZJT A;  3JAD A;  3P50 A;  5AFN A;  5KE4 A;  4WV9 A;  3UU6 A;  5HEO A;  2W8F A;  2X00 A;  5KZU A;  4AFT A;  4QAB A;  5L4E A;  4UM3 P;  3TLT A;  4BQT A;  2XYS A;  5TVC A;  2W8G A;  4PIR A;  3LSV A;  5L47 A;  2BR7 A;  2BR8 A;  3WTH A;  4UXU A;  2YME A;  2BG9 C;  5J5F A;  2WNL A;  4XHE A;  2YMD A;  4HFI A;  3TLS A;  2BYN A;  3PMZ A;  5FJV A;  3ZDH A;  4ZK4 A;  4IL4 A;  5HEG A;  5HCJ A;  2BJ0 A;  3PEO A;  4HFD A;  4UM3 S;  5J5H A;  3EI0 A;  2XQA A;  4ZRU A;  4ZZB A;  3C84 A;  3WTL A;  2XQ9 A;  4HFE A;  3WTO A;  4ZZC A;  4TNW A;  3P4W A;  4QAC A;  2Y58 A;  5J5I A;  3UU4 A;  4Z90 A;  4B5D A;  1I9B A;  2YKS A;  2BYQ A;  3IGQ A;  4ILB A;  5AFJ A;  5LG3 A;  4AFH A;  2WN9 A;  4X5T A;  2XNU A;  2WNJ A;  3UU3 A;  2XZ6 A;  2XNT A;  4FRR A;  5SYO A;  4Z91 A;  4A98 A;  5AFM A;  5IUX A;  2BG9 A;  3WTK A;  3U8M A;  5CFB A;  3RQU A;  3RHW A;  2YOE A;  2XQ6 A;  5L4H A;  4HFC A;  3WTN A;  2ZJU A;  3RIF A;  2XYT A;  4QH4 A;  3WTM A;  4UY2 A;  3SH1 A;  3UU5 A;  4LMK A;  2BG9 E;  4COF A;  3WIP A;  4ZK1 A;  3RIA A;  3UQ4 A;  2YN6 A;  4EZ1 A;  2Y56 A;  2PGZ A;  2ZJV A;  5AFL A;  2XNV A;  1UV6 A;  4QH5 A;  4QH1 A;  3RQW A;  3SQ6 A;  5HEH A;  3RI5 A;  4AFG A;  3U8J A;  3GUA A;  1UX2 A;  2XQ7 A;  2BYR A;  3EHZ A;  4ALX A;  4ILA A;  4UM3 A;  3ZDG A;  4D01 A;  3C79 A;  5AFM B;  2BG9 B;  3UQ7 A;  4HQP A;  4TWD A;  3TLU A;  5AFH A;  4IRE A;  4TNV A;  5HCM A;  2XQ5 A;  4TWH A;  3JAF A;  2Y54 A;  4XK9 A;  3U8K A;  2X00 D;  2VL0 A;  3U8L A;  4F8H A;  3SIO A;  2XQ4 A;  2XZ5 A;  3UUB A;  2UZ6 A;  5AFK A;  2BYS A;  3ZKR A;  4A97 A;  5BW2 A;  5JME A;  3SQ9 A;  4ILC A;  2XQ3 A;  2PH9 A;  4TWF A;  2Y7Y A;  5BRX A;  4HFB A;  3JAE A;  2XQ8 A;  2BYP A;  2WZY A;  5BP0 A;  3TLW A;  1UW6 A;  5AIN A;  4UM1 A;  4BFQ A;  4LMJ A;  2QC1 B;  3WTJ A;  5J0Z A;  2Y57 A;  4QAA A;  4IL9 A;  3WTI A;  5CO5 A;  3UU8 A;  3U8N A;  3TLV A;  4LML A;  5HEU A;  2C9T A;  4NZB A;  4HFH A;  4DBM A;  5J5G A;  3T4M A;  3EAM A;  4ZJS A;  4ZR6 A;  5LXB A; 
#chains in the Genus database with same CATH homology
 2WNC A;  4NPP A;  5HEJ A;  4ZJT A;  3JAD A;  3P50 A;  5AFN A;  5KE4 A;  4WV9 A;  3UU6 A;  5HEO A;  2W8F A;  2X00 A;  5KZU A;  4AFT A;  4QAB A;  5L4E A;  4UM3 P;  3TLT A;  4BQT A;  2XYS A;  5TVC A;  2W8G A;  4PIR A;  3LSV A;  5L47 A;  2BR7 A;  2BR8 A;  3WTH A;  4UXU A;  2YME A;  2BG9 C;  5J5F A;  2WNL A;  4XHE A;  2YMD A;  4HFI A;  3TLS A;  2BYN A;  3PMZ A;  5FJV A;  3ZDH A;  4ZK4 A;  4IL4 A;  5HEG A;  5HCJ A;  2BJ0 A;  3PEO A;  4HFD A;  4UM3 S;  5J5H A;  3EI0 A;  2XQA A;  4ZRU A;  4ZZB A;  3C84 A;  3WTL A;  2XQ9 A;  4HFE A;  3WTO A;  4ZZC A;  4TNW A;  3P4W A;  4QAC A;  2Y58 A;  5J5I A;  3UU4 A;  4Z90 A;  4B5D A;  1I9B A;  2YKS A;  2BYQ A;  3IGQ A;  4ILB A;  5AFJ A;  5LG3 A;  4AFH A;  2WN9 A;  4X5T A;  2XNU A;  2WNJ A;  3UU3 A;  2XZ6 A;  2XNT A;  4FRR A;  5SYO A;  4Z91 A;  4A98 A;  5AFM A;  5IUX A;  2BG9 A;  3WTK A;  3U8M A;  5CFB A;  3RQU A;  3RHW A;  2YOE A;  2XQ6 A;  5L4H A;  4HFC A;  3WTN A;  2ZJU A;  3RIF A;  2XYT A;  4QH4 A;  3WTM A;  4UY2 A;  3SH1 A;  3UU5 A;  4LMK A;  2BG9 E;  4COF A;  3WIP A;  4ZK1 A;  3RIA A;  3UQ4 A;  2YN6 A;  4EZ1 A;  2Y56 A;  2PGZ A;  2ZJV A;  5AFL A;  2XNV A;  1UV6 A;  4QH5 A;  4QH1 A;  3RQW A;  3SQ6 A;  5HEH A;  3RI5 A;  4AFG A;  3U8J A;  3GUA A;  1UX2 A;  2XQ7 A;  2BYR A;  3EHZ A;  4ALX A;  4ILA A;  4UM3 A;  3ZDG A;  4D01 A;  3C79 A;  5AFM B;  2BG9 B;  3UQ7 A;  4HQP A;  4TWD A;  3TLU A;  5AFH A;  4IRE A;  4TNV A;  5HCM A;  2XQ5 A;  4TWH A;  3JAF A;  2Y54 A;  4XK9 A;  3U8K A;  2X00 D;  2VL0 A;  3U8L A;  4F8H A;  3SIO A;  2XQ4 A;  2XZ5 A;  3UUB A;  2UZ6 A;  5AFK A;  2BYS A;  3ZKR A;  4A97 A;  5BW2 A;  5JME A;  3SQ9 A;  4ILC A;  2XQ3 A;  2PH9 A;  4TWF A;  2Y7Y A;  5BRX A;  4HFB A;  3JAE A;  2XQ8 A;  2BYP A;  2WZY A;  5BP0 A;  3TLW A;  1UW6 A;  5AIN A;  4UM1 A;  4BFQ A;  4LMJ A;  2QC1 B;  3WTJ A;  5J0Z A;  2Y57 A;  4QAA A;  4IL9 A;  3WTI A;  5CO5 A;  3UU8 A;  3U8N A;  3TLV A;  4LML A;  5HEU A;  2C9T A;  4NZB A;  4HFH A;  4DBM A;  5J5G A;  3T4M A;  3EAM A;  4ZJS A;  4ZR6 A;  5LXB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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