2C9TA

Crystal structure of acetylcholine binding protein (achbp) from aplysia californica in complex with alpha-conotoxin imi
Total Genus 49
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
205
structure length
205
Chain Sequence
QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Receptor/toxin
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
publication title Structural Determinants of Selective {Alpha}-Conotoxin Binding to a Nicotinic Acetylcholine Receptor Homolog Achbp.
pubmed doi rcsb
total genus 49
structure length 205
sequence length 205
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2005-12-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2c9tA00
2XQ4A 2XZ6A 2ZJVA 4ALXA 4UY2A 5AFHA 5BRXA 4QABA 4ILCA 3TLWA 4ZR6A 1I9BA 2XYSA 4ZZCA 5HCJA 3JADA 2XYTA 4ZJSA 5HEOA 4AFTA 2WZYA 4TWDA 1UW6A 5FJVA 5HEHA 3RQUA 2PGZA 1UV6A 5AFMB 2YN6A 5KZUA 5AFJA 2Y54A 2XQ6A 4DBMA 4UXUA 3WTNA 2BR7A 2BYQA 2XQ7A 3U8NA 3U8JA 5L4EA 5TVCA 2BYPA 3U8MA 3WIPA 2WNJA 2X00A 2BJ0A 4HFHA 2W8FA 2BYRA 2XQ9A 2Y7YA 2YMEA 5J5GA 2QC1B 4HFDA 3TLVA 5HEJA 4XHEA 5LXBA 4HFCA 3WTLA 3T4MA 4AFGA 4XK9A 3UU3A 5L47A 3EAMA 2BG9A 3C79A 3PEOA 4ZZBA 3WTIA 3SQ6A 3EHZA 3RQWA 4B5DA 3IGQA 3ZDHA 4HFIA 5J0ZA 5JMEA 2WNCA 5HEUA 3UU8A 2BG9C 4TWHA 2XQAA 4UM3S 2X00D 3WTMA 4F8HA 1UX2A 5HEGA 3TLTA 3UQ7A 2BG9E 5LG3A 5AFLA 4COFA 2W8GA 4ILBA 4FRRA 5AFMA 4ZK4A 4UM3P 5AINA 4QH4A 4ILAA 3ZDGA 2YMDA 4LMKA 3GUAA 3P4WA 2XNUA 5J5IA 5HCMA 4NPPA 3JAFA 4IL4A 4AFHA 4ZK1A 2Y57A 2XQ5A 3C84A 5BW2A 2XQ3A 4A98A 2XNTA 5KE4A 3U8LA 2UZ6A 3PMZA 2XQ8A 2Y58A 3ZKRA 3WTJA 4IL9A 5IUXA 2BYNA 2C9TA 4ZRUA 4HQPA 4UM1A 3UQ4A 5BP0A 5J5HA 3TLUA 4D01A 2WNLA 4QAAA 4ZJTA 3RIAA 3RI5A 2YKSA 3UU4A 5CO5A 3EI0A 3LSVA 3SH1A 3U8KA 3RIFA 4TNWA 4NZBA 4EZ1A 3WTKA 4X5TA 3JAEA 3P50A 2VL0A 4Z91A 3WTOA 4QH5A 3UU6A 2PH9A 2WN9A 3UU5A 5CFBA 4LMJA 3UUBA 4LMLA 3WTHA 2XNVA 4A97A 2Y56A 3SIOA 4HFBA 2XZ5A 2BR8A 4BQTA 4TWFA 2BYSA 4BFQA 4IREA 3SQ9A 5AFNA 5AFKA 4HFEA 4QH1A 4UM3A 5J5FA 4WV9A 3RHWA 4TNVA 5L4HA 3TLSA 4PIRA 2ZJUA 2YOEA 2BG9B 4QACA 4Z90A 5SYOA
chains in the Genus database with same CATH superfamily
2XQ4A 2XZ6A 2ZJVA 4ALXA 4UY2A 5AFHA 5BRXA 4QABA 4ILCA 3TLWA 4ZR6A 1I9BA 2XYSA 4ZZCA 5HCJA 3JADA 2XYTA 4ZJSA 5HEOA 4AFTA 2WZYA 4TWDA 1UW6A 5FJVA 5HEHA 3RQUA 2PGZA 1UV6A 5AFMB 2YN6A 5KZUA 5AFJA 2Y54A 2XQ6A 4DBMA 4UXUA 3WTNA 2BR7A 2BYQA 2XQ7A 3U8NA 3U8JA 5L4EA 5TVCA 2BYPA 3U8MA 3WIPA 2WNJA 2X00A 2BJ0A 4HFHA 2W8FA 2BYRA 2XQ9A 2Y7YA 2YMEA 5J5GA 2QC1B 4HFDA 3TLVA 5HEJA 4XHEA 5LXBA 4HFCA 3WTLA 3T4MA 4AFGA 4XK9A 3UU3A 5L47A 3EAMA 2BG9A 3C79A 3PEOA 4ZZBA 3WTIA 3SQ6A 3EHZA 3RQWA 4B5DA 3IGQA 3ZDHA 4HFIA 5J0ZA 5JMEA 2WNCA 5HEUA 3UU8A 2BG9C 4TWHA 2XQAA 4UM3S 2X00D 3WTMA 4F8HA 1UX2A 5HEGA 3TLTA 3UQ7A 2BG9E 5LG3A 5AFLA 4COFA 2W8GA 4ILBA 4FRRA 5AFMA 4ZK4A 4UM3P 5AINA 4QH4A 4ILAA 3ZDGA 2YMDA 4LMKA 3GUAA 3P4WA 2XNUA 5J5IA 5HCMA 4NPPA 3JAFA 4IL4A 4AFHA 4ZK1A 2Y57A 2XQ5A 3C84A 5BW2A 2XQ3A 4A98A 2XNTA 5KE4A 3U8LA 2UZ6A 3PMZA 2XQ8A 2Y58A 3ZKRA 3WTJA 4IL9A 5IUXA 2BYNA 2C9TA 4ZRUA 4HQPA 4UM1A 3UQ4A 5BP0A 5J5HA 3TLUA 4D01A 2WNLA 4QAAA 4ZJTA 3RIAA 3RI5A 2YKSA 3UU4A 5CO5A 3EI0A 3LSVA 3SH1A 3U8KA 3RIFA 4TNWA 4NZBA 4EZ1A 3WTKA 4X5TA 3JAEA 3P50A 2VL0A 4Z91A 3WTOA 4QH5A 3UU6A 2PH9A 2WN9A 3UU5A 5CFBA 4LMJA 3UUBA 4LMLA 3WTHA 2XNVA 4A97A 2Y56A 3SIOA 4HFBA 2XZ5A 2BR8A 4BQTA 4TWFA 2BYSA 4BFQA 4IREA 3SQ9A 5AFNA 5AFKA 4HFEA 4QH1A 4UM3A 5J5FA 4WV9A 3RHWA 4TNVA 5L4HA 3TLSA 4PIRA 2ZJUA 2YOEA 2BG9B 4QACA 4Z90A 5SYOA
chains in the Genus database with same CATH topology
2XQ4A 2XZ6A 2ZJVA 4ALXA 4UY2A 5AFHA 5BRXA 4QABA 4ILCA 3TLWA 4ZR6A 1I9BA 2XYSA 4ZZCA 5HCJA 3JADA 2XYTA 4ZJSA 5HEOA 4AFTA 2WZYA 4TWDA 1UW6A 5FJVA 5HEHA 3RQUA 2PGZA 1UV6A 5AFMB 2YN6A 5KZUA 5AFJA 2Y54A 2XQ6A 4DBMA 4UXUA 3WTNA 2BR7A 2BYQA 2XQ7A 3U8NA 3U8JA 5L4EA 5TVCA 2BYPA 3U8MA 3WIPA 2WNJA 2X00A 2BJ0A 4HFHA 2W8FA 2BYRA 2XQ9A 2Y7YA 2YMEA 5J5GA 2QC1B 4HFDA 3TLVA 5HEJA 4XHEA 5LXBA 4HFCA 3WTLA 3T4MA 4AFGA 4XK9A 3UU3A 5L47A 3EAMA 2BG9A 3C79A 3PEOA 4ZZBA 3WTIA 3SQ6A 3EHZA 3RQWA 4B5DA 3IGQA 3ZDHA 4HFIA 5J0ZA 5JMEA 2WNCA 5HEUA 3UU8A 2BG9C 4TWHA 2XQAA 4UM3S 2X00D 3WTMA 4F8HA 1UX2A 5HEGA 3TLTA 3UQ7A 2BG9E 5LG3A 5AFLA 4COFA 2W8GA 4ILBA 4FRRA 5AFMA 4ZK4A 4UM3P 5AINA 4QH4A 4ILAA 3ZDGA 2YMDA 4LMKA 3GUAA 3P4WA 2XNUA 5J5IA 5HCMA 4NPPA 3JAFA 4IL4A 4AFHA 4ZK1A 2Y57A 2XQ5A 3C84A 5BW2A 2XQ3A 4A98A 2XNTA 5KE4A 3U8LA 2UZ6A 3PMZA 2XQ8A 2Y58A 3ZKRA 3WTJA 4IL9A 5IUXA 2BYNA 2C9TA 4ZRUA 4HQPA 4UM1A 3UQ4A 5BP0A 5J5HA 3TLUA 4D01A 2WNLA 4QAAA 4ZJTA 3RIAA 3RI5A 2YKSA 3UU4A 5CO5A 3EI0A 3LSVA 3SH1A 3U8KA 3RIFA 4TNWA 4NZBA 4EZ1A 3WTKA 4X5TA 3JAEA 3P50A 2VL0A 4Z91A 3WTOA 4QH5A 3UU6A 2PH9A 2WN9A 3UU5A 5CFBA 4LMJA 3UUBA 4LMLA 3WTHA 2XNVA 4A97A 2Y56A 3SIOA 4HFBA 2XZ5A 2BR8A 4BQTA 4TWFA 2BYSA 4BFQA 4IREA 3SQ9A 5AFNA 5AFKA 4HFEA 4QH1A 4UM3A 5J5FA 4WV9A 3RHWA 4TNVA 5L4HA 3TLSA 4PIRA 2ZJUA 2YOEA 2BG9B 4QACA 4Z90A 5SYOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2XQ4 A;  2XZ6 A;  2ZJV A;  4ALX A;  4UY2 A;  5AFH A;  5BRX A;  4QAB A;  4ILC A;  3TLW A;  4ZR6 A;  1I9B A;  2XYS A;  4ZZC A;  5HCJ A;  3JAD A;  2XYT A;  4ZJS A;  5HEO A;  4AFT A;  2WZY A;  4TWD A;  1UW6 A;  5FJV A;  5HEH A;  3RQU A;  2PGZ A;  1UV6 A;  5AFM B;  2YN6 A;  5KZU A;  5AFJ A;  2Y54 A;  2XQ6 A;  4DBM A;  4UXU A;  3WTN A;  2BR7 A;  2BYQ A;  2XQ7 A;  3U8N A;  3U8J A;  5L4E A;  5TVC A;  2BYP A;  3U8M A;  3WIP A;  2WNJ A;  2X00 A;  2BJ0 A;  4HFH A;  2W8F A;  2BYR A;  2XQ9 A;  2Y7Y A;  2YME A;  5J5G A;  2QC1 B;  4HFD A;  3TLV A;  5HEJ A;  4XHE A;  5LXB A;  4HFC A;  3WTL A;  3T4M A;  4AFG A;  4XK9 A;  3UU3 A;  5L47 A;  3EAM A;  2BG9 A;  3C79 A;  3PEO A;  4ZZB A;  3WTI A;  3SQ6 A;  3EHZ A;  3RQW A;  4B5D A;  3IGQ A;  3ZDH A;  4HFI A;  5J0Z A;  5JME A;  2WNC A;  5HEU A;  3UU8 A;  2BG9 C;  4TWH A;  2XQA A;  4UM3 S;  2X00 D;  3WTM A;  4F8H A;  1UX2 A;  5HEG A;  3TLT A;  3UQ7 A;  2BG9 E;  5LG3 A;  5AFL A;  4COF A;  2W8G A;  4ILB A;  4FRR A;  5AFM A;  4ZK4 A;  4UM3 P;  5AIN A;  4QH4 A;  4ILA A;  3ZDG A;  2YMD A;  4LMK A;  3GUA A;  3P4W A;  2XNU A;  5J5I A;  5HCM A;  4NPP A;  3JAF A;  4IL4 A;  4AFH A;  4ZK1 A;  2Y57 A;  2XQ5 A;  3C84 A;  5BW2 A;  2XQ3 A;  4A98 A;  2XNT A;  5KE4 A;  3U8L A;  2UZ6 A;  3PMZ A;  2XQ8 A;  2Y58 A;  3ZKR A;  3WTJ A;  4IL9 A;  5IUX A;  2BYN A;  2C9T A;  4ZRU A;  4HQP A;  4UM1 A;  3UQ4 A;  5BP0 A;  5J5H A;  3TLU A;  4D01 A;  2WNL A;  4QAA A;  4ZJT A;  3RIA A;  3RI5 A;  2YKS A;  3UU4 A;  5CO5 A;  3EI0 A;  3LSV A;  3SH1 A;  3U8K A;  3RIF A;  4TNW A;  4NZB A;  4EZ1 A;  3WTK A;  4X5T A;  3JAE A;  3P50 A;  2VL0 A;  4Z91 A;  3WTO A;  4QH5 A;  3UU6 A;  2PH9 A;  2WN9 A;  3UU5 A;  5CFB A;  4LMJ A;  3UUB A;  4LML A;  3WTH A;  2XNV A;  4A97 A;  2Y56 A;  3SIO A;  4HFB A;  2XZ5 A;  2BR8 A;  4BQT A;  4TWF A;  2BYS A;  4BFQ A;  4IRE A;  3SQ9 A;  5AFN A;  5AFK A;  4HFE A;  4QH1 A;  4UM3 A;  5J5F A;  4WV9 A;  3RHW A;  4TNV A;  5L4H A;  3TLS A;  4PIR A;  2ZJU A;  2YOE A;  2BG9 B;  4QAC A;  4Z90 A;  5SYO A; 
#chains in the Genus database with same CATH topology
 2XQ4 A;  2XZ6 A;  2ZJV A;  4ALX A;  4UY2 A;  5AFH A;  5BRX A;  4QAB A;  4ILC A;  3TLW A;  4ZR6 A;  1I9B A;  2XYS A;  4ZZC A;  5HCJ A;  3JAD A;  2XYT A;  4ZJS A;  5HEO A;  4AFT A;  2WZY A;  4TWD A;  1UW6 A;  5FJV A;  5HEH A;  3RQU A;  2PGZ A;  1UV6 A;  5AFM B;  2YN6 A;  5KZU A;  5AFJ A;  2Y54 A;  2XQ6 A;  4DBM A;  4UXU A;  3WTN A;  2BR7 A;  2BYQ A;  2XQ7 A;  3U8N A;  3U8J A;  5L4E A;  5TVC A;  2BYP A;  3U8M A;  3WIP A;  2WNJ A;  2X00 A;  2BJ0 A;  4HFH A;  2W8F A;  2BYR A;  2XQ9 A;  2Y7Y A;  2YME A;  5J5G A;  2QC1 B;  4HFD A;  3TLV A;  5HEJ A;  4XHE A;  5LXB A;  4HFC A;  3WTL A;  3T4M A;  4AFG A;  4XK9 A;  3UU3 A;  5L47 A;  3EAM A;  2BG9 A;  3C79 A;  3PEO A;  4ZZB A;  3WTI A;  3SQ6 A;  3EHZ A;  3RQW A;  4B5D A;  3IGQ A;  3ZDH A;  4HFI A;  5J0Z A;  5JME A;  2WNC A;  5HEU A;  3UU8 A;  2BG9 C;  4TWH A;  2XQA A;  4UM3 S;  2X00 D;  3WTM A;  4F8H A;  1UX2 A;  5HEG A;  3TLT A;  3UQ7 A;  2BG9 E;  5LG3 A;  5AFL A;  4COF A;  2W8G A;  4ILB A;  4FRR A;  5AFM A;  4ZK4 A;  4UM3 P;  5AIN A;  4QH4 A;  4ILA A;  3ZDG A;  2YMD A;  4LMK A;  3GUA A;  3P4W A;  2XNU A;  5J5I A;  5HCM A;  4NPP A;  3JAF A;  4IL4 A;  4AFH A;  4ZK1 A;  2Y57 A;  2XQ5 A;  3C84 A;  5BW2 A;  2XQ3 A;  4A98 A;  2XNT A;  5KE4 A;  3U8L A;  2UZ6 A;  3PMZ A;  2XQ8 A;  2Y58 A;  3ZKR A;  3WTJ A;  4IL9 A;  5IUX A;  2BYN A;  2C9T A;  4ZRU A;  4HQP A;  4UM1 A;  3UQ4 A;  5BP0 A;  5J5H A;  3TLU A;  4D01 A;  2WNL A;  4QAA A;  4ZJT A;  3RIA A;  3RI5 A;  2YKS A;  3UU4 A;  5CO5 A;  3EI0 A;  3LSV A;  3SH1 A;  3U8K A;  3RIF A;  4TNW A;  4NZB A;  4EZ1 A;  3WTK A;  4X5T A;  3JAE A;  3P50 A;  2VL0 A;  4Z91 A;  3WTO A;  4QH5 A;  3UU6 A;  2PH9 A;  2WN9 A;  3UU5 A;  5CFB A;  4LMJ A;  3UUB A;  4LML A;  3WTH A;  2XNV A;  4A97 A;  2Y56 A;  3SIO A;  4HFB A;  2XZ5 A;  2BR8 A;  4BQT A;  4TWF A;  2BYS A;  4BFQ A;  4IRE A;  3SQ9 A;  5AFN A;  5AFK A;  4HFE A;  4QH1 A;  4UM3 A;  5J5F A;  4WV9 A;  3RHW A;  4TNV A;  5L4H A;  3TLS A;  4PIR A;  2ZJU A;  2YOE A;  2BG9 B;  4QAC A;  4Z90 A;  5SYO A; 
#chains in the Genus database with same CATH homology
 2XQ4 A;  2XZ6 A;  2ZJV A;  4ALX A;  4UY2 A;  5AFH A;  5BRX A;  4QAB A;  4ILC A;  3TLW A;  4ZR6 A;  1I9B A;  2XYS A;  4ZZC A;  5HCJ A;  3JAD A;  2XYT A;  4ZJS A;  5HEO A;  4AFT A;  2WZY A;  4TWD A;  1UW6 A;  5FJV A;  5HEH A;  3RQU A;  2PGZ A;  1UV6 A;  5AFM B;  2YN6 A;  5KZU A;  5AFJ A;  2Y54 A;  2XQ6 A;  4DBM A;  4UXU A;  3WTN A;  2BR7 A;  2BYQ A;  2XQ7 A;  3U8N A;  3U8J A;  5L4E A;  5TVC A;  2BYP A;  3U8M A;  3WIP A;  2WNJ A;  2X00 A;  2BJ0 A;  4HFH A;  2W8F A;  2BYR A;  2XQ9 A;  2Y7Y A;  2YME A;  5J5G A;  2QC1 B;  4HFD A;  3TLV A;  5HEJ A;  4XHE A;  5LXB A;  4HFC A;  3WTL A;  3T4M A;  4AFG A;  4XK9 A;  3UU3 A;  5L47 A;  3EAM A;  2BG9 A;  3C79 A;  3PEO A;  4ZZB A;  3WTI A;  3SQ6 A;  3EHZ A;  3RQW A;  4B5D A;  3IGQ A;  3ZDH A;  4HFI A;  5J0Z A;  5JME A;  2WNC A;  5HEU A;  3UU8 A;  2BG9 C;  4TWH A;  2XQA A;  4UM3 S;  2X00 D;  3WTM A;  4F8H A;  1UX2 A;  5HEG A;  3TLT A;  3UQ7 A;  2BG9 E;  5LG3 A;  5AFL A;  4COF A;  2W8G A;  4ILB A;  4FRR A;  5AFM A;  4ZK4 A;  4UM3 P;  5AIN A;  4QH4 A;  4ILA A;  3ZDG A;  2YMD A;  4LMK A;  3GUA A;  3P4W A;  2XNU A;  5J5I A;  5HCM A;  4NPP A;  3JAF A;  4IL4 A;  4AFH A;  4ZK1 A;  2Y57 A;  2XQ5 A;  3C84 A;  5BW2 A;  2XQ3 A;  4A98 A;  2XNT A;  5KE4 A;  3U8L A;  2UZ6 A;  3PMZ A;  2XQ8 A;  2Y58 A;  3ZKR A;  3WTJ A;  4IL9 A;  5IUX A;  2BYN A;  2C9T A;  4ZRU A;  4HQP A;  4UM1 A;  3UQ4 A;  5BP0 A;  5J5H A;  3TLU A;  4D01 A;  2WNL A;  4QAA A;  4ZJT A;  3RIA A;  3RI5 A;  2YKS A;  3UU4 A;  5CO5 A;  3EI0 A;  3LSV A;  3SH1 A;  3U8K A;  3RIF A;  4TNW A;  4NZB A;  4EZ1 A;  3WTK A;  4X5T A;  3JAE A;  3P50 A;  2VL0 A;  4Z91 A;  3WTO A;  4QH5 A;  3UU6 A;  2PH9 A;  2WN9 A;  3UU5 A;  5CFB A;  4LMJ A;  3UUB A;  4LML A;  3WTH A;  2XNV A;  4A97 A;  2Y56 A;  3SIO A;  4HFB A;  2XZ5 A;  2BR8 A;  4BQT A;  4TWF A;  2BYS A;  4BFQ A;  4IRE A;  3SQ9 A;  5AFN A;  5AFK A;  4HFE A;  4QH1 A;  4UM3 A;  5J5F A;  4WV9 A;  3RHW A;  4TNV A;  5L4H A;  3TLS A;  4PIR A;  2ZJU A;  2YOE A;  2BG9 B;  4QAC A;  4Z90 A;  5SYO A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...