2C9TA

Crystal structure of acetylcholine binding protein (achbp) from aplysia californica in complex with alpha-conotoxin imi
Total Genus 49
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
49
sequence length
205
structure length
205
Chain Sequence
b'QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Structural Determinants of Selective {Alpha}-Conotoxin Binding to a Nicotinic Acetylcholine Receptor Homolog Achbp.
pubmed doi rcsb
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
molecule tags Receptor/toxin
total genus 49
structure length 205
sequence length 205
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2005-12-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2c9tA00
3EHZA 3RQWA 2W8FA 2XNTA 2WNLA 4Z90A 3TLWA 3UQ4A 3WTIA 3RI5A 5AFLA 3WTMA 5SYOA 4B5DA 3TLSA 4TWFA 2XQ5A 3C84A 4QABA 4ZJSA 2YMDA 3JAFA 3SIOA 3PEOA 3UU3A 3WTHA 4BQTA 5BRXA 3UQ7A 3ZKRA 3U8KA 3WTOA 4FRRA 4HFHA 4F8HA 4ZZCA 3SQ6A 4HFIA 2XQAA 2Y57A 4QH4A 4ZJTA 4TWDA 5BW2A 3UU5A 2ZJUA 4A98A 2XYTA 3SQ9A 3T4MA 4TNWA 2UZ6A 4QAAA 4COFA 2Y7YA 5HCJA 3IGQA 3WTKA 1UV6A 2Y54A 1UW6A 4UY2A 2BYQA 2BYRA 4D01A 2BYPA 4ZZBA 2BR7A 4QACA 4HFCA 3RIAA 3SH1A 3TLUA 2BJ0A 3RIFA 4NPPA 2WZYA 3LSVA 4UXUA 4AFGA 5HCMA 5IUXA 3EI0A 4LMJA 4XHEA 5AFJA 5L47A 5TVCA 4ILCA 2C9TA 5CO5A 2X00D 3JADA 5J5HA 4A97A 3JAEA 4ILBA 2XQ6A 5HEJA 3WIPA 5KZUA 2YN6A 3U8LA 5J0ZA 3ZDHA 5J5GA 3WTLA 4X5TA 5L4HA 3PMZA 3RHWA 5LXBA 4HFBA 2BR8A 2WN9A 3U8JA 5AFHA 4HFEA 4XK9A 4ZR6A 2XZ6A 5J5FA 3UU4A 2XNVA 4ZRUA 4LMLA 4UM1A 3U8NA 5CFBA 2Y58A 2XYSA 2PH9A 2BG9C 3P4WA 4TNVA 4WV9A 2XQ7A 5HEHA 3ZDGA 5AFMB 5L4EA 4QH5A 4HFDA 4AFTA 5JMEA 4ALXA 3U8MA 4TWHA 5LG3A 3UU8A 4HQPA 5AFMA 2YOEA 4QH1A 2BYNA 4ZK1A 5AFNA 5J5IA 2XQ4A 2XQ9A 4IL4A 2BYSA 2X00A 2QC1B 4EZ1A 2BG9E 2BG9B 2YMEA 4UM3P 4AFHA 5KE4A 4NZBA 5HEUA 4UM3S 5HEOA 1I9BA 2XQ8A 2VL0A 4DBMA 2ZJVA 5FJVA 3TLVA 3RQUA 4UM3A 2WNCA 5HEGA 3UU6A 3EAMA 5AINA 5AFKA 2XQ3A 1UX2A 4PIRA 2BG9A 2YKSA 2XZ5A 5BP0A 2WNJA 3C79A 4IREA 3UUBA 2PGZA 3TLTA 3WTNA 3P50A 4IL9A 2W8GA 4ZK4A 2XNUA 3GUAA 4LMKA 3WTJA 2Y56A 4ILAA 4BFQA 4Z91A
chains in the Genus database with same CATH superfamily
3EHZA 3RQWA 2W8FA 2XNTA 2WNLA 4Z90A 3TLWA 3UQ4A 3WTIA 3RI5A 5AFLA 3WTMA 5SYOA 4B5DA 3TLSA 4TWFA 2XQ5A 3C84A 4QABA 4ZJSA 2YMDA 3JAFA 3SIOA 3PEOA 3UU3A 3WTHA 4BQTA 5BRXA 3UQ7A 3ZKRA 3U8KA 3WTOA 4FRRA 4HFHA 4F8HA 4ZZCA 3SQ6A 4HFIA 2XQAA 2Y57A 4QH4A 4ZJTA 4TWDA 5BW2A 3UU5A 2ZJUA 4A98A 2XYTA 3SQ9A 3T4MA 4TNWA 2UZ6A 4QAAA 4COFA 2Y7YA 5HCJA 3IGQA 3WTKA 1UV6A 2Y54A 1UW6A 4UY2A 2BYQA 2BYRA 4D01A 2BYPA 4ZZBA 2BR7A 4QACA 4HFCA 3RIAA 3SH1A 3TLUA 2BJ0A 3RIFA 4NPPA 2WZYA 3LSVA 4UXUA 4AFGA 5HCMA 5IUXA 3EI0A 4LMJA 4XHEA 5AFJA 5L47A 5TVCA 4ILCA 2C9TA 5CO5A 2X00D 3JADA 5J5HA 4A97A 3JAEA 4ILBA 2XQ6A 5HEJA 3WIPA 5KZUA 2YN6A 3U8LA 5J0ZA 3ZDHA 5J5GA 3WTLA 4X5TA 5L4HA 3PMZA 3RHWA 5LXBA 4HFBA 2BR8A 2WN9A 3U8JA 5AFHA 4HFEA 4XK9A 4ZR6A 2XZ6A 5J5FA 3UU4A 2XNVA 4ZRUA 4LMLA 4UM1A 3U8NA 5CFBA 2Y58A 2XYSA 2PH9A 2BG9C 3P4WA 4TNVA 4WV9A 2XQ7A 5HEHA 3ZDGA 5AFMB 5L4EA 4QH5A 4HFDA 4AFTA 5JMEA 4ALXA 3U8MA 4TWHA 5LG3A 3UU8A 4HQPA 5AFMA 2YOEA 4QH1A 2BYNA 4ZK1A 5AFNA 5J5IA 2XQ4A 2XQ9A 4IL4A 2BYSA 2X00A 2QC1B 4EZ1A 2BG9E 2BG9B 2YMEA 4UM3P 4AFHA 5KE4A 4NZBA 5HEUA 4UM3S 5HEOA 1I9BA 2XQ8A 2VL0A 4DBMA 2ZJVA 5FJVA 3TLVA 3RQUA 4UM3A 2WNCA 5HEGA 3UU6A 3EAMA 5AINA 5AFKA 2XQ3A 1UX2A 4PIRA 2BG9A 2YKSA 2XZ5A 5BP0A 2WNJA 3C79A 4IREA 3UUBA 2PGZA 3TLTA 3WTNA 3P50A 4IL9A 2W8GA 4ZK4A 2XNUA 3GUAA 4LMKA 3WTJA 2Y56A 4ILAA 4BFQA 4Z91A
chains in the Genus database with same CATH topology
3EHZA 3RQWA 2W8FA 2XNTA 2WNLA 4Z90A 3TLWA 3UQ4A 3WTIA 3RI5A 5AFLA 3WTMA 5SYOA 4B5DA 3TLSA 4TWFA 2XQ5A 3C84A 4QABA 4ZJSA 2YMDA 3JAFA 3SIOA 3PEOA 3UU3A 3WTHA 4BQTA 5BRXA 3UQ7A 3ZKRA 3U8KA 3WTOA 4FRRA 4HFHA 4F8HA 4ZZCA 3SQ6A 4HFIA 2XQAA 2Y57A 4QH4A 4ZJTA 4TWDA 5BW2A 3UU5A 2ZJUA 4A98A 2XYTA 3SQ9A 3T4MA 4TNWA 2UZ6A 4QAAA 4COFA 2Y7YA 5HCJA 3IGQA 3WTKA 1UV6A 2Y54A 1UW6A 4UY2A 2BYQA 2BYRA 4D01A 2BYPA 4ZZBA 2BR7A 4QACA 4HFCA 3RIAA 3SH1A 3TLUA 2BJ0A 3RIFA 4NPPA 2WZYA 3LSVA 4UXUA 4AFGA 5HCMA 5IUXA 3EI0A 4LMJA 4XHEA 5AFJA 5L47A 5TVCA 4ILCA 2C9TA 5CO5A 2X00D 3JADA 5J5HA 4A97A 3JAEA 4ILBA 2XQ6A 5HEJA 3WIPA 5KZUA 2YN6A 3U8LA 5J0ZA 3ZDHA 5J5GA 3WTLA 4X5TA 5L4HA 3PMZA 3RHWA 5LXBA 4HFBA 2BR8A 2WN9A 3U8JA 5AFHA 4HFEA 4XK9A 4ZR6A 2XZ6A 5J5FA 3UU4A 2XNVA 4ZRUA 4LMLA 4UM1A 3U8NA 5CFBA 2Y58A 2XYSA 2PH9A 2BG9C 3P4WA 4TNVA 4WV9A 2XQ7A 5HEHA 3ZDGA 5AFMB 5L4EA 4QH5A 4HFDA 4AFTA 5JMEA 4ALXA 3U8MA 4TWHA 5LG3A 3UU8A 4HQPA 5AFMA 2YOEA 4QH1A 2BYNA 4ZK1A 5AFNA 5J5IA 2XQ4A 2XQ9A 4IL4A 2BYSA 2X00A 2QC1B 4EZ1A 2BG9E 2BG9B 2YMEA 4UM3P 4AFHA 5KE4A 4NZBA 5HEUA 4UM3S 5HEOA 1I9BA 2XQ8A 2VL0A 4DBMA 2ZJVA 5FJVA 3TLVA 3RQUA 4UM3A 2WNCA 5HEGA 3UU6A 3EAMA 5AINA 5AFKA 2XQ3A 1UX2A 4PIRA 2BG9A 2YKSA 2XZ5A 5BP0A 2WNJA 3C79A 4IREA 3UUBA 2PGZA 3TLTA 3WTNA 3P50A 4IL9A 2W8GA 4ZK4A 2XNUA 3GUAA 4LMKA 3WTJA 2Y56A 4ILAA 4BFQA 4Z91A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EHZ A;  3RQW A;  2W8F A;  2XNT A;  2WNL A;  4Z90 A;  3TLW A;  3UQ4 A;  3WTI A;  3RI5 A;  5AFL A;  3WTM A;  5SYO A;  4B5D A;  3TLS A;  4TWF A;  2XQ5 A;  3C84 A;  4QAB A;  4ZJS A;  2YMD A;  3JAF A;  3SIO A;  3PEO A;  3UU3 A;  3WTH A;  4BQT A;  5BRX A;  3UQ7 A;  3ZKR A;  3U8K A;  3WTO A;  4FRR A;  4HFH A;  4F8H A;  4ZZC A;  3SQ6 A;  4HFI A;  2XQA A;  2Y57 A;  4QH4 A;  4ZJT A;  4TWD A;  5BW2 A;  3UU5 A;  2ZJU A;  4A98 A;  2XYT A;  3SQ9 A;  3T4M A;  4TNW A;  2UZ6 A;  4QAA A;  4COF A;  2Y7Y A;  5HCJ A;  3IGQ A;  3WTK A;  1UV6 A;  2Y54 A;  1UW6 A;  4UY2 A;  2BYQ A;  2BYR A;  4D01 A;  2BYP A;  4ZZB A;  2BR7 A;  4QAC A;  4HFC A;  3RIA A;  3SH1 A;  3TLU A;  2BJ0 A;  3RIF A;  4NPP A;  2WZY A;  3LSV A;  4UXU A;  4AFG A;  5HCM A;  5IUX A;  3EI0 A;  4LMJ A;  4XHE A;  5AFJ A;  5L47 A;  5TVC A;  4ILC A;  2C9T A;  5CO5 A;  2X00 D;  3JAD A;  5J5H A;  4A97 A;  3JAE A;  4ILB A;  2XQ6 A;  5HEJ A;  3WIP A;  5KZU A;  2YN6 A;  3U8L A;  5J0Z A;  3ZDH A;  5J5G A;  3WTL A;  4X5T A;  5L4H A;  3PMZ A;  3RHW A;  5LXB A;  4HFB A;  2BR8 A;  2WN9 A;  3U8J A;  5AFH A;  4HFE A;  4XK9 A;  4ZR6 A;  2XZ6 A;  5J5F A;  3UU4 A;  2XNV A;  4ZRU A;  4LML A;  4UM1 A;  3U8N A;  5CFB A;  2Y58 A;  2XYS A;  2PH9 A;  2BG9 C;  3P4W A;  4TNV A;  4WV9 A;  2XQ7 A;  5HEH A;  3ZDG A;  5AFM B;  5L4E A;  4QH5 A;  4HFD A;  4AFT A;  5JME A;  4ALX A;  3U8M A;  4TWH A;  5LG3 A;  3UU8 A;  4HQP A;  5AFM A;  2YOE A;  4QH1 A;  2BYN A;  4ZK1 A;  5AFN A;  5J5I A;  2XQ4 A;  2XQ9 A;  4IL4 A;  2BYS A;  2X00 A;  2QC1 B;  4EZ1 A;  2BG9 E;  2BG9 B;  2YME A;  4UM3 P;  4AFH A;  5KE4 A;  4NZB A;  5HEU A;  4UM3 S;  5HEO A;  1I9B A;  2XQ8 A;  2VL0 A;  4DBM A;  2ZJV A;  5FJV A;  3TLV A;  3RQU A;  4UM3 A;  2WNC A;  5HEG A;  3UU6 A;  3EAM A;  5AIN A;  5AFK A;  2XQ3 A;  1UX2 A;  4PIR A;  2BG9 A;  2YKS A;  2XZ5 A;  5BP0 A;  2WNJ A;  3C79 A;  4IRE A;  3UUB A;  2PGZ A;  3TLT A;  3WTN A;  3P50 A;  4IL9 A;  2W8G A;  4ZK4 A;  2XNU A;  3GUA A;  4LMK A;  3WTJ A;  2Y56 A;  4ILA A;  4BFQ A;  4Z91 A; 
#chains in the Genus database with same CATH topology
 3EHZ A;  3RQW A;  2W8F A;  2XNT A;  2WNL A;  4Z90 A;  3TLW A;  3UQ4 A;  3WTI A;  3RI5 A;  5AFL A;  3WTM A;  5SYO A;  4B5D A;  3TLS A;  4TWF A;  2XQ5 A;  3C84 A;  4QAB A;  4ZJS A;  2YMD A;  3JAF A;  3SIO A;  3PEO A;  3UU3 A;  3WTH A;  4BQT A;  5BRX A;  3UQ7 A;  3ZKR A;  3U8K A;  3WTO A;  4FRR A;  4HFH A;  4F8H A;  4ZZC A;  3SQ6 A;  4HFI A;  2XQA A;  2Y57 A;  4QH4 A;  4ZJT A;  4TWD A;  5BW2 A;  3UU5 A;  2ZJU A;  4A98 A;  2XYT A;  3SQ9 A;  3T4M A;  4TNW A;  2UZ6 A;  4QAA A;  4COF A;  2Y7Y A;  5HCJ A;  3IGQ A;  3WTK A;  1UV6 A;  2Y54 A;  1UW6 A;  4UY2 A;  2BYQ A;  2BYR A;  4D01 A;  2BYP A;  4ZZB A;  2BR7 A;  4QAC A;  4HFC A;  3RIA A;  3SH1 A;  3TLU A;  2BJ0 A;  3RIF A;  4NPP A;  2WZY A;  3LSV A;  4UXU A;  4AFG A;  5HCM A;  5IUX A;  3EI0 A;  4LMJ A;  4XHE A;  5AFJ A;  5L47 A;  5TVC A;  4ILC A;  2C9T A;  5CO5 A;  2X00 D;  3JAD A;  5J5H A;  4A97 A;  3JAE A;  4ILB A;  2XQ6 A;  5HEJ A;  3WIP A;  5KZU A;  2YN6 A;  3U8L A;  5J0Z A;  3ZDH A;  5J5G A;  3WTL A;  4X5T A;  5L4H A;  3PMZ A;  3RHW A;  5LXB A;  4HFB A;  2BR8 A;  2WN9 A;  3U8J A;  5AFH A;  4HFE A;  4XK9 A;  4ZR6 A;  2XZ6 A;  5J5F A;  3UU4 A;  2XNV A;  4ZRU A;  4LML A;  4UM1 A;  3U8N A;  5CFB A;  2Y58 A;  2XYS A;  2PH9 A;  2BG9 C;  3P4W A;  4TNV A;  4WV9 A;  2XQ7 A;  5HEH A;  3ZDG A;  5AFM B;  5L4E A;  4QH5 A;  4HFD A;  4AFT A;  5JME A;  4ALX A;  3U8M A;  4TWH A;  5LG3 A;  3UU8 A;  4HQP A;  5AFM A;  2YOE A;  4QH1 A;  2BYN A;  4ZK1 A;  5AFN A;  5J5I A;  2XQ4 A;  2XQ9 A;  4IL4 A;  2BYS A;  2X00 A;  2QC1 B;  4EZ1 A;  2BG9 E;  2BG9 B;  2YME A;  4UM3 P;  4AFH A;  5KE4 A;  4NZB A;  5HEU A;  4UM3 S;  5HEO A;  1I9B A;  2XQ8 A;  2VL0 A;  4DBM A;  2ZJV A;  5FJV A;  3TLV A;  3RQU A;  4UM3 A;  2WNC A;  5HEG A;  3UU6 A;  3EAM A;  5AIN A;  5AFK A;  2XQ3 A;  1UX2 A;  4PIR A;  2BG9 A;  2YKS A;  2XZ5 A;  5BP0 A;  2WNJ A;  3C79 A;  4IRE A;  3UUB A;  2PGZ A;  3TLT A;  3WTN A;  3P50 A;  4IL9 A;  2W8G A;  4ZK4 A;  2XNU A;  3GUA A;  4LMK A;  3WTJ A;  2Y56 A;  4ILA A;  4BFQ A;  4Z91 A; 
#chains in the Genus database with same CATH homology
 3EHZ A;  3RQW A;  2W8F A;  2XNT A;  2WNL A;  4Z90 A;  3TLW A;  3UQ4 A;  3WTI A;  3RI5 A;  5AFL A;  3WTM A;  5SYO A;  4B5D A;  3TLS A;  4TWF A;  2XQ5 A;  3C84 A;  4QAB A;  4ZJS A;  2YMD A;  3JAF A;  3SIO A;  3PEO A;  3UU3 A;  3WTH A;  4BQT A;  5BRX A;  3UQ7 A;  3ZKR A;  3U8K A;  3WTO A;  4FRR A;  4HFH A;  4F8H A;  4ZZC A;  3SQ6 A;  4HFI A;  2XQA A;  2Y57 A;  4QH4 A;  4ZJT A;  4TWD A;  5BW2 A;  3UU5 A;  2ZJU A;  4A98 A;  2XYT A;  3SQ9 A;  3T4M A;  4TNW A;  2UZ6 A;  4QAA A;  4COF A;  2Y7Y A;  5HCJ A;  3IGQ A;  3WTK A;  1UV6 A;  2Y54 A;  1UW6 A;  4UY2 A;  2BYQ A;  2BYR A;  4D01 A;  2BYP A;  4ZZB A;  2BR7 A;  4QAC A;  4HFC A;  3RIA A;  3SH1 A;  3TLU A;  2BJ0 A;  3RIF A;  4NPP A;  2WZY A;  3LSV A;  4UXU A;  4AFG A;  5HCM A;  5IUX A;  3EI0 A;  4LMJ A;  4XHE A;  5AFJ A;  5L47 A;  5TVC A;  4ILC A;  2C9T A;  5CO5 A;  2X00 D;  3JAD A;  5J5H A;  4A97 A;  3JAE A;  4ILB A;  2XQ6 A;  5HEJ A;  3WIP A;  5KZU A;  2YN6 A;  3U8L A;  5J0Z A;  3ZDH A;  5J5G A;  3WTL A;  4X5T A;  5L4H A;  3PMZ A;  3RHW A;  5LXB A;  4HFB A;  2BR8 A;  2WN9 A;  3U8J A;  5AFH A;  4HFE A;  4XK9 A;  4ZR6 A;  2XZ6 A;  5J5F A;  3UU4 A;  2XNV A;  4ZRU A;  4LML A;  4UM1 A;  3U8N A;  5CFB A;  2Y58 A;  2XYS A;  2PH9 A;  2BG9 C;  3P4W A;  4TNV A;  4WV9 A;  2XQ7 A;  5HEH A;  3ZDG A;  5AFM B;  5L4E A;  4QH5 A;  4HFD A;  4AFT A;  5JME A;  4ALX A;  3U8M A;  4TWH A;  5LG3 A;  3UU8 A;  4HQP A;  5AFM A;  2YOE A;  4QH1 A;  2BYN A;  4ZK1 A;  5AFN A;  5J5I A;  2XQ4 A;  2XQ9 A;  4IL4 A;  2BYS A;  2X00 A;  2QC1 B;  4EZ1 A;  2BG9 E;  2BG9 B;  2YME A;  4UM3 P;  4AFH A;  5KE4 A;  4NZB A;  5HEU A;  4UM3 S;  5HEO A;  1I9B A;  2XQ8 A;  2VL0 A;  4DBM A;  2ZJV A;  5FJV A;  3TLV A;  3RQU A;  4UM3 A;  2WNC A;  5HEG A;  3UU6 A;  3EAM A;  5AIN A;  5AFK A;  2XQ3 A;  1UX2 A;  4PIR A;  2BG9 A;  2YKS A;  2XZ5 A;  5BP0 A;  2WNJ A;  3C79 A;  4IRE A;  3UUB A;  2PGZ A;  3TLT A;  3WTN A;  3P50 A;  4IL9 A;  2W8G A;  4ZK4 A;  2XNU A;  3GUA A;  4LMK A;  3WTJ A;  2Y56 A;  4ILA A;  4BFQ A;  4Z91 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...