3WTKA

Crystal structure of lymnaea stagnalis acetylcholine-binding protein q55r mutant complexed with thiacloprid
Total Genus 44
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
44
sequence length
208
structure length
208
Chain Sequence
AADRADILYNIRQTSRPDVIPTQRDRPVAVSVSLKFINILEVNEITNEVDVVFWQRTTWSDRTLAWDSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKKGRS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
molecule keywords Acetylcholine-binding protein
publication title Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
pubmed doi rcsb
source organism Lymnaea stagnalis
total genus 44
structure length 208
sequence length 208
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2014-04-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 3wtkA00
3EI0A 4LMKA 5HEGA 3SQ9A 3WTMA 5HEUA 2X00A 2W8FA 1UX2A 4ILCA 3WTLA 5CO5A 3ZKRA 4HFCA 3IGQA 4UM3A 4HQPA 3SH1A 2BJ0A 5HEOA 3UQ7A 4ZJTA 2PGZA 2WNLA 4UM3P 4ILBA 2XQ9A 4F8HA 2XYTA 2BYSA 2XQ4A 3SIOA 2XQ8A 3RQUA 2BG9A 4HFDA 2Y57A 2YMDA 3U8LA 3ZDGA 3RIAA 3ZDHA 2BR8A 3UUBA 5IUXA 4ZZCA 5AFKA 5HCJA 2PH9A 4D01A 2UZ6A 2YOEA 4IL4A 3UQ4A 2BR7A 5L47A 3UU8A 4BFQA 2XQAA 4UY2A 4AFGA 2XNTA 3WTHA 3PEOA 3UU6A 2XQ5A 4HFEA 4QH1A 3T4MA 1I9BA 3U8MA 3GUAA 3RQWA 5BP0A 2VL0A 3TLSA 5J0ZA 4X5TA 4TNVA 4AFHA 4IL9A 4WV9A 2ZJUA 4HFHA 3RHWA 2BYQA 2WNJA 2WZYA 4TWFA 2XQ3A 4NPPA 3EAMA 3U8KA 5AFMA 4UXUA 5LG3A 3LSVA 4DBMA 3TLWA 1UW6A 2YKSA 2BG9B 4IREA 4Z91A 3JADA 2BG9C 3TLUA 4ZK4A 3JAEA 4UM1A 3C79A 4ZJSA 2Y7YA 4QABA 3UU3A 4TNWA 3WTOA 2Y58A 3SQ6A 5SYOA 2XZ6A 5J5HA 4A97A 2Y56A 5HEJA 2WNCA 2BYPA 3P4WA 2XNUA 4Z90A 5CFBA 4ZK1A 4QH4A 2XQ7A 5AFJA 3WTKA 4LMLA 5L4HA 2XYSA 4ZR6A 3WTJA 3WIPA 4QACA 2Y54A 3UU4A 3RI5A 5J5GA 4EZ1A 5AFMB 5HEHA 4UM3S 2BYRA 5AINA 4TWDA 2C9TA 4COFA 3RIFA 4ILAA 4XK9A 4HFIA 5AFNA 5TVCA 2YN6A 5BRXA 5BW2A 4ZZBA 2BYNA 3WTIA 1UV6A 5L4EA 3C84A 3U8NA 2QC1B 5LXBA 3WTNA 3U8JA 4QAAA 4HFBA 3JAFA 3P50A 4XHEA 4AFTA 2ZJVA 4B5DA 5AFHA 4BQTA 4ZRUA 4NZBA 4TWHA 2X00D 3TLVA 4ALXA 2WN9A 2XNVA 2XZ5A 3EHZA 5J5IA 4FRRA 3TLTA 5J5FA 5HCMA 4LMJA 4QH5A 2YMEA 4A98A 5KZUA 5KE4A 3UU5A 2XQ6A 5JMEA 3PMZA 5FJVA 2BG9E 2W8GA 4PIRA 5AFLA
chains in the Genus database with same CATH superfamily
3EI0A 4LMKA 5HEGA 3SQ9A 3WTMA 5HEUA 2X00A 2W8FA 1UX2A 4ILCA 3WTLA 5CO5A 3ZKRA 4HFCA 3IGQA 4UM3A 4HQPA 3SH1A 2BJ0A 5HEOA 3UQ7A 4ZJTA 2PGZA 2WNLA 4UM3P 4ILBA 2XQ9A 4F8HA 2XYTA 2BYSA 2XQ4A 3SIOA 2XQ8A 3RQUA 2BG9A 4HFDA 2Y57A 2YMDA 3U8LA 3ZDGA 3RIAA 3ZDHA 2BR8A 3UUBA 5IUXA 4ZZCA 5AFKA 5HCJA 2PH9A 4D01A 2UZ6A 2YOEA 4IL4A 3UQ4A 2BR7A 5L47A 3UU8A 4BFQA 2XQAA 4UY2A 4AFGA 2XNTA 3WTHA 3PEOA 3UU6A 2XQ5A 4HFEA 4QH1A 3T4MA 1I9BA 3U8MA 3GUAA 3RQWA 5BP0A 2VL0A 3TLSA 5J0ZA 4X5TA 4TNVA 4AFHA 4IL9A 4WV9A 2ZJUA 4HFHA 3RHWA 2BYQA 2WNJA 2WZYA 4TWFA 2XQ3A 4NPPA 3EAMA 3U8KA 5AFMA 4UXUA 5LG3A 3LSVA 4DBMA 3TLWA 1UW6A 2YKSA 2BG9B 4IREA 4Z91A 3JADA 2BG9C 3TLUA 4ZK4A 3JAEA 4UM1A 3C79A 4ZJSA 2Y7YA 4QABA 3UU3A 4TNWA 3WTOA 2Y58A 3SQ6A 5SYOA 2XZ6A 5J5HA 4A97A 2Y56A 5HEJA 2WNCA 2BYPA 3P4WA 2XNUA 4Z90A 5CFBA 4ZK1A 4QH4A 2XQ7A 5AFJA 3WTKA 4LMLA 5L4HA 2XYSA 4ZR6A 3WTJA 3WIPA 4QACA 2Y54A 3UU4A 3RI5A 5J5GA 4EZ1A 5AFMB 5HEHA 4UM3S 2BYRA 5AINA 4TWDA 2C9TA 4COFA 3RIFA 4ILAA 4XK9A 4HFIA 5AFNA 5TVCA 2YN6A 5BRXA 5BW2A 4ZZBA 2BYNA 3WTIA 1UV6A 5L4EA 3C84A 3U8NA 2QC1B 5LXBA 3WTNA 3U8JA 4QAAA 4HFBA 3JAFA 3P50A 4XHEA 4AFTA 2ZJVA 4B5DA 5AFHA 4BQTA 4ZRUA 4NZBA 4TWHA 2X00D 3TLVA 4ALXA 2WN9A 2XNVA 2XZ5A 3EHZA 5J5IA 4FRRA 3TLTA 5J5FA 5HCMA 4LMJA 4QH5A 2YMEA 4A98A 5KZUA 5KE4A 3UU5A 2XQ6A 5JMEA 3PMZA 5FJVA 2BG9E 2W8GA 4PIRA 5AFLA
chains in the Genus database with same CATH topology
3EI0A 4LMKA 5HEGA 3SQ9A 3WTMA 5HEUA 2X00A 2W8FA 1UX2A 4ILCA 3WTLA 5CO5A 3ZKRA 4HFCA 3IGQA 4UM3A 4HQPA 3SH1A 2BJ0A 5HEOA 3UQ7A 4ZJTA 2PGZA 2WNLA 4UM3P 4ILBA 2XQ9A 4F8HA 2XYTA 2BYSA 2XQ4A 3SIOA 2XQ8A 3RQUA 2BG9A 4HFDA 2Y57A 2YMDA 3U8LA 3ZDGA 3RIAA 3ZDHA 2BR8A 3UUBA 5IUXA 4ZZCA 5AFKA 5HCJA 2PH9A 4D01A 2UZ6A 2YOEA 4IL4A 3UQ4A 2BR7A 5L47A 3UU8A 4BFQA 2XQAA 4UY2A 4AFGA 2XNTA 3WTHA 3PEOA 3UU6A 2XQ5A 4HFEA 4QH1A 3T4MA 1I9BA 3U8MA 3GUAA 3RQWA 5BP0A 2VL0A 3TLSA 5J0ZA 4X5TA 4TNVA 4AFHA 4IL9A 4WV9A 2ZJUA 4HFHA 3RHWA 2BYQA 2WNJA 2WZYA 4TWFA 2XQ3A 4NPPA 3EAMA 3U8KA 5AFMA 4UXUA 5LG3A 3LSVA 4DBMA 3TLWA 1UW6A 2YKSA 2BG9B 4IREA 4Z91A 3JADA 2BG9C 3TLUA 4ZK4A 3JAEA 4UM1A 3C79A 4ZJSA 2Y7YA 4QABA 3UU3A 4TNWA 3WTOA 2Y58A 3SQ6A 5SYOA 2XZ6A 5J5HA 4A97A 2Y56A 5HEJA 2WNCA 2BYPA 3P4WA 2XNUA 4Z90A 5CFBA 4ZK1A 4QH4A 2XQ7A 5AFJA 3WTKA 4LMLA 5L4HA 2XYSA 4ZR6A 3WTJA 3WIPA 4QACA 2Y54A 3UU4A 3RI5A 5J5GA 4EZ1A 5AFMB 5HEHA 4UM3S 2BYRA 5AINA 4TWDA 2C9TA 4COFA 3RIFA 4ILAA 4XK9A 4HFIA 5AFNA 5TVCA 2YN6A 5BRXA 5BW2A 4ZZBA 2BYNA 3WTIA 1UV6A 5L4EA 3C84A 3U8NA 2QC1B 5LXBA 3WTNA 3U8JA 4QAAA 4HFBA 3JAFA 3P50A 4XHEA 4AFTA 2ZJVA 4B5DA 5AFHA 4BQTA 4ZRUA 4NZBA 4TWHA 2X00D 3TLVA 4ALXA 2WN9A 2XNVA 2XZ5A 3EHZA 5J5IA 4FRRA 3TLTA 5J5FA 5HCMA 4LMJA 4QH5A 2YMEA 4A98A 5KZUA 5KE4A 3UU5A 2XQ6A 5JMEA 3PMZA 5FJVA 2BG9E 2W8GA 4PIRA 5AFLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EI0 A;  4LMK A;  5HEG A;  3SQ9 A;  3WTM A;  5HEU A;  2X00 A;  2W8F A;  1UX2 A;  4ILC A;  3WTL A;  5CO5 A;  3ZKR A;  4HFC A;  3IGQ A;  4UM3 A;  4HQP A;  3SH1 A;  2BJ0 A;  5HEO A;  3UQ7 A;  4ZJT A;  2PGZ A;  2WNL A;  4UM3 P;  4ILB A;  2XQ9 A;  4F8H A;  2XYT A;  2BYS A;  2XQ4 A;  3SIO A;  2XQ8 A;  3RQU A;  2BG9 A;  4HFD A;  2Y57 A;  2YMD A;  3U8L A;  3ZDG A;  3RIA A;  3ZDH A;  2BR8 A;  3UUB A;  5IUX A;  4ZZC A;  5AFK A;  5HCJ A;  2PH9 A;  4D01 A;  2UZ6 A;  2YOE A;  4IL4 A;  3UQ4 A;  2BR7 A;  5L47 A;  3UU8 A;  4BFQ A;  2XQA A;  4UY2 A;  4AFG A;  2XNT A;  3WTH A;  3PEO A;  3UU6 A;  2XQ5 A;  4HFE A;  4QH1 A;  3T4M A;  1I9B A;  3U8M A;  3GUA A;  3RQW A;  5BP0 A;  2VL0 A;  3TLS A;  5J0Z A;  4X5T A;  4TNV A;  4AFH A;  4IL9 A;  4WV9 A;  2ZJU A;  4HFH A;  3RHW A;  2BYQ A;  2WNJ A;  2WZY A;  4TWF A;  2XQ3 A;  4NPP A;  3EAM A;  3U8K A;  5AFM A;  4UXU A;  5LG3 A;  3LSV A;  4DBM A;  3TLW A;  1UW6 A;  2YKS A;  2BG9 B;  4IRE A;  4Z91 A;  3JAD A;  2BG9 C;  3TLU A;  4ZK4 A;  3JAE A;  4UM1 A;  3C79 A;  4ZJS A;  2Y7Y A;  4QAB A;  3UU3 A;  4TNW A;  3WTO A;  2Y58 A;  3SQ6 A;  5SYO A;  2XZ6 A;  5J5H A;  4A97 A;  2Y56 A;  5HEJ A;  2WNC A;  2BYP A;  3P4W A;  2XNU A;  4Z90 A;  5CFB A;  4ZK1 A;  4QH4 A;  2XQ7 A;  5AFJ A;  3WTK A;  4LML A;  5L4H A;  2XYS A;  4ZR6 A;  3WTJ A;  3WIP A;  4QAC A;  2Y54 A;  3UU4 A;  3RI5 A;  5J5G A;  4EZ1 A;  5AFM B;  5HEH A;  4UM3 S;  2BYR A;  5AIN A;  4TWD A;  2C9T A;  4COF A;  3RIF A;  4ILA A;  4XK9 A;  4HFI A;  5AFN A;  5TVC A;  2YN6 A;  5BRX A;  5BW2 A;  4ZZB A;  2BYN A;  3WTI A;  1UV6 A;  5L4E A;  3C84 A;  3U8N A;  2QC1 B;  5LXB A;  3WTN A;  3U8J A;  4QAA A;  4HFB A;  3JAF A;  3P50 A;  4XHE A;  4AFT A;  2ZJV A;  4B5D A;  5AFH A;  4BQT A;  4ZRU A;  4NZB A;  4TWH A;  2X00 D;  3TLV A;  4ALX A;  2WN9 A;  2XNV A;  2XZ5 A;  3EHZ A;  5J5I A;  4FRR A;  3TLT A;  5J5F A;  5HCM A;  4LMJ A;  4QH5 A;  2YME A;  4A98 A;  5KZU A;  5KE4 A;  3UU5 A;  2XQ6 A;  5JME A;  3PMZ A;  5FJV A;  2BG9 E;  2W8G A;  4PIR A;  5AFL A; 
#chains in the Genus database with same CATH topology
 3EI0 A;  4LMK A;  5HEG A;  3SQ9 A;  3WTM A;  5HEU A;  2X00 A;  2W8F A;  1UX2 A;  4ILC A;  3WTL A;  5CO5 A;  3ZKR A;  4HFC A;  3IGQ A;  4UM3 A;  4HQP A;  3SH1 A;  2BJ0 A;  5HEO A;  3UQ7 A;  4ZJT A;  2PGZ A;  2WNL A;  4UM3 P;  4ILB A;  2XQ9 A;  4F8H A;  2XYT A;  2BYS A;  2XQ4 A;  3SIO A;  2XQ8 A;  3RQU A;  2BG9 A;  4HFD A;  2Y57 A;  2YMD A;  3U8L A;  3ZDG A;  3RIA A;  3ZDH A;  2BR8 A;  3UUB A;  5IUX A;  4ZZC A;  5AFK A;  5HCJ A;  2PH9 A;  4D01 A;  2UZ6 A;  2YOE A;  4IL4 A;  3UQ4 A;  2BR7 A;  5L47 A;  3UU8 A;  4BFQ A;  2XQA A;  4UY2 A;  4AFG A;  2XNT A;  3WTH A;  3PEO A;  3UU6 A;  2XQ5 A;  4HFE A;  4QH1 A;  3T4M A;  1I9B A;  3U8M A;  3GUA A;  3RQW A;  5BP0 A;  2VL0 A;  3TLS A;  5J0Z A;  4X5T A;  4TNV A;  4AFH A;  4IL9 A;  4WV9 A;  2ZJU A;  4HFH A;  3RHW A;  2BYQ A;  2WNJ A;  2WZY A;  4TWF A;  2XQ3 A;  4NPP A;  3EAM A;  3U8K A;  5AFM A;  4UXU A;  5LG3 A;  3LSV A;  4DBM A;  3TLW A;  1UW6 A;  2YKS A;  2BG9 B;  4IRE A;  4Z91 A;  3JAD A;  2BG9 C;  3TLU A;  4ZK4 A;  3JAE A;  4UM1 A;  3C79 A;  4ZJS A;  2Y7Y A;  4QAB A;  3UU3 A;  4TNW A;  3WTO A;  2Y58 A;  3SQ6 A;  5SYO A;  2XZ6 A;  5J5H A;  4A97 A;  2Y56 A;  5HEJ A;  2WNC A;  2BYP A;  3P4W A;  2XNU A;  4Z90 A;  5CFB A;  4ZK1 A;  4QH4 A;  2XQ7 A;  5AFJ A;  3WTK A;  4LML A;  5L4H A;  2XYS A;  4ZR6 A;  3WTJ A;  3WIP A;  4QAC A;  2Y54 A;  3UU4 A;  3RI5 A;  5J5G A;  4EZ1 A;  5AFM B;  5HEH A;  4UM3 S;  2BYR A;  5AIN A;  4TWD A;  2C9T A;  4COF A;  3RIF A;  4ILA A;  4XK9 A;  4HFI A;  5AFN A;  5TVC A;  2YN6 A;  5BRX A;  5BW2 A;  4ZZB A;  2BYN A;  3WTI A;  1UV6 A;  5L4E A;  3C84 A;  3U8N A;  2QC1 B;  5LXB A;  3WTN A;  3U8J A;  4QAA A;  4HFB A;  3JAF A;  3P50 A;  4XHE A;  4AFT A;  2ZJV A;  4B5D A;  5AFH A;  4BQT A;  4ZRU A;  4NZB A;  4TWH A;  2X00 D;  3TLV A;  4ALX A;  2WN9 A;  2XNV A;  2XZ5 A;  3EHZ A;  5J5I A;  4FRR A;  3TLT A;  5J5F A;  5HCM A;  4LMJ A;  4QH5 A;  2YME A;  4A98 A;  5KZU A;  5KE4 A;  3UU5 A;  2XQ6 A;  5JME A;  3PMZ A;  5FJV A;  2BG9 E;  2W8G A;  4PIR A;  5AFL A; 
#chains in the Genus database with same CATH homology
 3EI0 A;  4LMK A;  5HEG A;  3SQ9 A;  3WTM A;  5HEU A;  2X00 A;  2W8F A;  1UX2 A;  4ILC A;  3WTL A;  5CO5 A;  3ZKR A;  4HFC A;  3IGQ A;  4UM3 A;  4HQP A;  3SH1 A;  2BJ0 A;  5HEO A;  3UQ7 A;  4ZJT A;  2PGZ A;  2WNL A;  4UM3 P;  4ILB A;  2XQ9 A;  4F8H A;  2XYT A;  2BYS A;  2XQ4 A;  3SIO A;  2XQ8 A;  3RQU A;  2BG9 A;  4HFD A;  2Y57 A;  2YMD A;  3U8L A;  3ZDG A;  3RIA A;  3ZDH A;  2BR8 A;  3UUB A;  5IUX A;  4ZZC A;  5AFK A;  5HCJ A;  2PH9 A;  4D01 A;  2UZ6 A;  2YOE A;  4IL4 A;  3UQ4 A;  2BR7 A;  5L47 A;  3UU8 A;  4BFQ A;  2XQA A;  4UY2 A;  4AFG A;  2XNT A;  3WTH A;  3PEO A;  3UU6 A;  2XQ5 A;  4HFE A;  4QH1 A;  3T4M A;  1I9B A;  3U8M A;  3GUA A;  3RQW A;  5BP0 A;  2VL0 A;  3TLS A;  5J0Z A;  4X5T A;  4TNV A;  4AFH A;  4IL9 A;  4WV9 A;  2ZJU A;  4HFH A;  3RHW A;  2BYQ A;  2WNJ A;  2WZY A;  4TWF A;  2XQ3 A;  4NPP A;  3EAM A;  3U8K A;  5AFM A;  4UXU A;  5LG3 A;  3LSV A;  4DBM A;  3TLW A;  1UW6 A;  2YKS A;  2BG9 B;  4IRE A;  4Z91 A;  3JAD A;  2BG9 C;  3TLU A;  4ZK4 A;  3JAE A;  4UM1 A;  3C79 A;  4ZJS A;  2Y7Y A;  4QAB A;  3UU3 A;  4TNW A;  3WTO A;  2Y58 A;  3SQ6 A;  5SYO A;  2XZ6 A;  5J5H A;  4A97 A;  2Y56 A;  5HEJ A;  2WNC A;  2BYP A;  3P4W A;  2XNU A;  4Z90 A;  5CFB A;  4ZK1 A;  4QH4 A;  2XQ7 A;  5AFJ A;  3WTK A;  4LML A;  5L4H A;  2XYS A;  4ZR6 A;  3WTJ A;  3WIP A;  4QAC A;  2Y54 A;  3UU4 A;  3RI5 A;  5J5G A;  4EZ1 A;  5AFM B;  5HEH A;  4UM3 S;  2BYR A;  5AIN A;  4TWD A;  2C9T A;  4COF A;  3RIF A;  4ILA A;  4XK9 A;  4HFI A;  5AFN A;  5TVC A;  2YN6 A;  5BRX A;  5BW2 A;  4ZZB A;  2BYN A;  3WTI A;  1UV6 A;  5L4E A;  3C84 A;  3U8N A;  2QC1 B;  5LXB A;  3WTN A;  3U8J A;  4QAA A;  4HFB A;  3JAF A;  3P50 A;  4XHE A;  4AFT A;  2ZJV A;  4B5D A;  5AFH A;  4BQT A;  4ZRU A;  4NZB A;  4TWH A;  2X00 D;  3TLV A;  4ALX A;  2WN9 A;  2XNV A;  2XZ5 A;  3EHZ A;  5J5I A;  4FRR A;  3TLT A;  5J5F A;  5HCM A;  4LMJ A;  4QH5 A;  2YME A;  4A98 A;  5KZU A;  5KE4 A;  3UU5 A;  2XQ6 A;  5JME A;  3PMZ A;  5FJV A;  2BG9 E;  2W8G A;  4PIR A;  5AFL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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