4WV9A

Crystal structure of acetylcholine binding protein (achbp) from aplysia californica in complex with click chemistry compound (3-exo)-8,8-dimethyl-3-[4-(pyridin-4-yl)-1h-1,2,3-triazol-1-yl]-8-azoniabicyclo[3.2.1]octane
Total Genus 48

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
210
structure length
206
Chain Sequence
DKLHSQANLMRLKSDLFNYPGPTKDDPLTVTLGFTLQDIVKADSSTNEVDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGATCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TI10 (150-153)TIV1 (25-28)S10 (154-158)S1 (29-44)S11 (174-188)TI3 (45-48)TI2 (44-47)S8 (120-126)TIV2 (92-95)S2 (49-61)EMPTY3H1 (63-65)TI6 (110-113)S6 (106-110)3H2 (69-71)TI'1 (72-75)O1 (104-106)S3 (77-81)S4 (90-92)TI9 (146-149)S5 (100-101)S7 (114-117)O2 (127-140)S9 (138-146)TI7 (131-134)TII1 (129-132)S12 (191-206)TI8 (134-137)TVIII1 (158-161)TI12 (165-168)TVIII2 (172-175)TI13 (169-172)AH1 (-2-15)TI1 (24-27)TI4 (81-84)Updating...
connected with : NaN
molecule tags Choline-binding protein
source organism Aplysia californica
publication title Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with click chemistry compound.
rcsb
molecule keywords Soluble acetylcholine receptor
total genus 48
structure length 206
sequence length 210
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2014-11-04
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4wv9A00
4A97A 2PGZA 4AFGA 2BR8A 4HFCA 3TLWA 4QH5A 3C79A 5J5FA 3RIFA 3UU4A 5AFMB 2WZYA 2W8FA 4D01A 2YN6A 4UXUA 2Y7YA 2Y58A 5HEGA 2BYSA 2X00D 4HFHA 1UX2A 2BG9E 3EAMA 3TLTA 3WTOA 5AFKA 4LMLA 3U8MA 4ZZCA 2Y56A 2ZJVA 4HFIA 5KE4A 2XQ5A 4BQTA 5AFNA 3SIOA 3U8LA 2XYTA 4QABA 4WV9A 3JAFA 2XQ8A 5AFJA 4LMJA 3WTHA 3LSVA 4A98A 3JAEA 5KZUA 2BJ0A 5HEHA 2BR7A 3SH1A 5J5IA 2X00A 3UU6A 4QAAA 2UZ6A 4TWDA 5HCJA 5BP0A 4HFDA 5JMEA 2Y54A 2XQ4A 4TWFA 4EZ1A 2PH9A 2XNVA 3UUBA 3UU8A 3UU3A 3U8KA 4Z91A 5J5HA 4B5DA 3WTIA 4F8HA 3ZKRA 2XQAA 5HEUA 2YKSA 3P50A 2YMDA 3PMZA 2XZ6A 2BG9C 3WTKA 4ZK1A 2BG9A 5BW2A 2XQ7A 3EHZA 5L4HA 4UM3S 3TLVA 4X5TA 5AFLA 3WTJA 2XYSA 4QH4A 3RHWA 5L4EA 2Y57A 4XHEA 4BFQA 4DBMA 2YMEA 5TVCA 4IL9A 3EI0A 3IGQA 3PEOA 4HFBA 2WNJA 4ZR6A 2XZ5A 4LMKA 3SQ9A 4HQPA 3T4MA 3WTMA 5BRXA 3U8JA 5AFHA 2BG9B 4AFHA 5CO5A 5HEOA 4FRRA 3GUAA 4ILAA 3RQWA 2BYNA 4NPPA 4UM3P 5IUXA 3RI5A 4TNWA 2BYQA 4QACA 4ILCA 2XQ3A 2YOEA 4ZK4A 2XQ9A 2BYPA 4TNVA 4UY2A 5SYOA 5AINA 4NZBA 4UM3A 4ZZBA 2WNCA 2W8GA 4XK9A 5J5GA 1I9BA 2XQ6A 4IREA 3UQ7A 5J0ZA 4ALXA 4ZRUA 3U8NA 3WTLA 5LG3A 5HEJA 4IL4A 4AFTA 3P4WA 3UU5A 3WIPA 2XNUA 2C9TA 2XNTA 4ILBA 4UM1A 4Z90A 5LXBA 2VL0A 5HCMA 4PIRA 3TLSA 3UQ4A 3RQUA 3TLUA 3C84A 3SQ6A 3WTNA 4ZJTA 2WN9A 3ZDHA 5AFMA 5L47A 3JADA 2ZJUA 2BYRA 3ZDGA 2QC1B 4ZJSA 3RIAA 1UV6A 4COFA 4HFEA 5CFBA 5FJVA 4QH1A 4TWHA 1UW6A 2WNLA
chains in the Genus database with same CATH superfamily
4A97A 2PGZA 4AFGA 2BR8A 4HFCA 3TLWA 4QH5A 3C79A 5J5FA 3RIFA 3UU4A 5AFMB 2WZYA 2W8FA 4D01A 2YN6A 4UXUA 2Y7YA 2Y58A 5HEGA 2BYSA 2X00D 4HFHA 1UX2A 2BG9E 3EAMA 3TLTA 3WTOA 5AFKA 4LMLA 3U8MA 4ZZCA 2Y56A 2ZJVA 4HFIA 5KE4A 2XQ5A 4BQTA 5AFNA 3SIOA 3U8LA 2XYTA 4QABA 4WV9A 3JAFA 2XQ8A 5AFJA 4LMJA 3WTHA 3LSVA 4A98A 3JAEA 5KZUA 2BJ0A 5HEHA 2BR7A 3SH1A 5J5IA 2X00A 3UU6A 4QAAA 2UZ6A 4TWDA 5HCJA 5BP0A 4HFDA 5JMEA 2Y54A 2XQ4A 4TWFA 4EZ1A 2PH9A 2XNVA 3UUBA 3UU8A 3UU3A 3U8KA 4Z91A 5J5HA 4B5DA 3WTIA 4F8HA 3ZKRA 2XQAA 5HEUA 2YKSA 3P50A 2YMDA 3PMZA 2XZ6A 2BG9C 3WTKA 4ZK1A 2BG9A 5BW2A 2XQ7A 3EHZA 5L4HA 4UM3S 3TLVA 4X5TA 5AFLA 3WTJA 2XYSA 4QH4A 3RHWA 5L4EA 2Y57A 4XHEA 4BFQA 4DBMA 2YMEA 5TVCA 4IL9A 3EI0A 3IGQA 3PEOA 4HFBA 2WNJA 4ZR6A 2XZ5A 4LMKA 3SQ9A 4HQPA 3T4MA 3WTMA 5BRXA 3U8JA 5AFHA 2BG9B 4AFHA 5CO5A 5HEOA 4FRRA 3GUAA 4ILAA 3RQWA 2BYNA 4NPPA 4UM3P 5IUXA 3RI5A 4TNWA 2BYQA 4QACA 4ILCA 2XQ3A 2YOEA 4ZK4A 2XQ9A 2BYPA 4TNVA 4UY2A 5SYOA 5AINA 4NZBA 4UM3A 4ZZBA 2WNCA 2W8GA 4XK9A 5J5GA 1I9BA 2XQ6A 4IREA 3UQ7A 5J0ZA 4ALXA 4ZRUA 3U8NA 3WTLA 5LG3A 5HEJA 4IL4A 4AFTA 3P4WA 3UU5A 3WIPA 2XNUA 2C9TA 2XNTA 4ILBA 4UM1A 4Z90A 5LXBA 2VL0A 5HCMA 4PIRA 3TLSA 3UQ4A 3RQUA 3TLUA 3C84A 3SQ6A 3WTNA 4ZJTA 2WN9A 3ZDHA 5AFMA 5L47A 3JADA 2ZJUA 2BYRA 3ZDGA 2QC1B 4ZJSA 3RIAA 1UV6A 4COFA 4HFEA 5CFBA 5FJVA 4QH1A 4TWHA 1UW6A 2WNLA
chains in the Genus database with same CATH topology
4A97A 2PGZA 4AFGA 2BR8A 4HFCA 3TLWA 4QH5A 3C79A 5J5FA 3RIFA 3UU4A 5AFMB 2WZYA 2W8FA 4D01A 2YN6A 4UXUA 2Y7YA 2Y58A 5HEGA 2BYSA 2X00D 4HFHA 1UX2A 2BG9E 3EAMA 3TLTA 3WTOA 5AFKA 4LMLA 3U8MA 4ZZCA 2Y56A 2ZJVA 4HFIA 5KE4A 2XQ5A 4BQTA 5AFNA 3SIOA 3U8LA 2XYTA 4QABA 4WV9A 3JAFA 2XQ8A 5AFJA 4LMJA 3WTHA 3LSVA 4A98A 3JAEA 5KZUA 2BJ0A 5HEHA 2BR7A 3SH1A 5J5IA 2X00A 3UU6A 4QAAA 2UZ6A 4TWDA 5HCJA 5BP0A 4HFDA 5JMEA 2Y54A 2XQ4A 4TWFA 4EZ1A 2PH9A 2XNVA 3UUBA 3UU8A 3UU3A 3U8KA 4Z91A 5J5HA 4B5DA 3WTIA 4F8HA 3ZKRA 2XQAA 5HEUA 2YKSA 3P50A 2YMDA 3PMZA 2XZ6A 2BG9C 3WTKA 4ZK1A 2BG9A 5BW2A 2XQ7A 3EHZA 5L4HA 4UM3S 3TLVA 4X5TA 5AFLA 3WTJA 2XYSA 4QH4A 3RHWA 5L4EA 2Y57A 4XHEA 4BFQA 4DBMA 2YMEA 5TVCA 4IL9A 3EI0A 3IGQA 3PEOA 4HFBA 2WNJA 4ZR6A 2XZ5A 4LMKA 3SQ9A 4HQPA 3T4MA 3WTMA 5BRXA 3U8JA 5AFHA 2BG9B 4AFHA 5CO5A 5HEOA 4FRRA 3GUAA 4ILAA 3RQWA 2BYNA 4NPPA 4UM3P 5IUXA 3RI5A 4TNWA 2BYQA 4QACA 4ILCA 2XQ3A 2YOEA 4ZK4A 2XQ9A 2BYPA 4TNVA 4UY2A 5SYOA 5AINA 4NZBA 4UM3A 4ZZBA 2WNCA 2W8GA 4XK9A 5J5GA 1I9BA 2XQ6A 4IREA 3UQ7A 5J0ZA 4ALXA 4ZRUA 3U8NA 3WTLA 5LG3A 5HEJA 4IL4A 4AFTA 3P4WA 3UU5A 3WIPA 2XNUA 2C9TA 2XNTA 4ILBA 4UM1A 4Z90A 5LXBA 2VL0A 5HCMA 4PIRA 3TLSA 3UQ4A 3RQUA 3TLUA 3C84A 3SQ6A 3WTNA 4ZJTA 2WN9A 3ZDHA 5AFMA 5L47A 3JADA 2ZJUA 2BYRA 3ZDGA 2QC1B 4ZJSA 3RIAA 1UV6A 4COFA 4HFEA 5CFBA 5FJVA 4QH1A 4TWHA 1UW6A 2WNLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A97 A;  2PGZ A;  4AFG A;  2BR8 A;  4HFC A;  3TLW A;  4QH5 A;  3C79 A;  5J5F A;  3RIF A;  3UU4 A;  5AFM B;  2WZY A;  2W8F A;  4D01 A;  2YN6 A;  4UXU A;  2Y7Y A;  2Y58 A;  5HEG A;  2BYS A;  2X00 D;  4HFH A;  1UX2 A;  2BG9 E;  3EAM A;  3TLT A;  3WTO A;  5AFK A;  4LML A;  3U8M A;  4ZZC A;  2Y56 A;  2ZJV A;  4HFI A;  5KE4 A;  2XQ5 A;  4BQT A;  5AFN A;  3SIO A;  3U8L A;  2XYT A;  4QAB A;  4WV9 A;  3JAF A;  2XQ8 A;  5AFJ A;  4LMJ A;  3WTH A;  3LSV A;  4A98 A;  3JAE A;  5KZU A;  2BJ0 A;  5HEH A;  2BR7 A;  3SH1 A;  5J5I A;  2X00 A;  3UU6 A;  4QAA A;  2UZ6 A;  4TWD A;  5HCJ A;  5BP0 A;  4HFD A;  5JME A;  2Y54 A;  2XQ4 A;  4TWF A;  4EZ1 A;  2PH9 A;  2XNV A;  3UUB A;  3UU8 A;  3UU3 A;  3U8K A;  4Z91 A;  5J5H A;  4B5D A;  3WTI A;  4F8H A;  3ZKR A;  2XQA A;  5HEU A;  2YKS A;  3P50 A;  2YMD A;  3PMZ A;  2XZ6 A;  2BG9 C;  3WTK A;  4ZK1 A;  2BG9 A;  5BW2 A;  2XQ7 A;  3EHZ A;  5L4H A;  4UM3 S;  3TLV A;  4X5T A;  5AFL A;  3WTJ A;  2XYS A;  4QH4 A;  3RHW A;  5L4E A;  2Y57 A;  4XHE A;  4BFQ A;  4DBM A;  2YME A;  5TVC A;  4IL9 A;  3EI0 A;  3IGQ A;  3PEO A;  4HFB A;  2WNJ A;  4ZR6 A;  2XZ5 A;  4LMK A;  3SQ9 A;  4HQP A;  3T4M A;  3WTM A;  5BRX A;  3U8J A;  5AFH A;  2BG9 B;  4AFH A;  5CO5 A;  5HEO A;  4FRR A;  3GUA A;  4ILA A;  3RQW A;  2BYN A;  4NPP A;  4UM3 P;  5IUX A;  3RI5 A;  4TNW A;  2BYQ A;  4QAC A;  4ILC A;  2XQ3 A;  2YOE A;  4ZK4 A;  2XQ9 A;  2BYP A;  4TNV A;  4UY2 A;  5SYO A;  5AIN A;  4NZB A;  4UM3 A;  4ZZB A;  2WNC A;  2W8G A;  4XK9 A;  5J5G A;  1I9B A;  2XQ6 A;  4IRE A;  3UQ7 A;  5J0Z A;  4ALX A;  4ZRU A;  3U8N A;  3WTL A;  5LG3 A;  5HEJ A;  4IL4 A;  4AFT A;  3P4W A;  3UU5 A;  3WIP A;  2XNU A;  2C9T A;  2XNT A;  4ILB A;  4UM1 A;  4Z90 A;  5LXB A;  2VL0 A;  5HCM A;  4PIR A;  3TLS A;  3UQ4 A;  3RQU A;  3TLU A;  3C84 A;  3SQ6 A;  3WTN A;  4ZJT A;  2WN9 A;  3ZDH A;  5AFM A;  5L47 A;  3JAD A;  2ZJU A;  2BYR A;  3ZDG A;  2QC1 B;  4ZJS A;  3RIA A;  1UV6 A;  4COF A;  4HFE A;  5CFB A;  5FJV A;  4QH1 A;  4TWH A;  1UW6 A;  2WNL A; 
#chains in the Genus database with same CATH topology
 4A97 A;  2PGZ A;  4AFG A;  2BR8 A;  4HFC A;  3TLW A;  4QH5 A;  3C79 A;  5J5F A;  3RIF A;  3UU4 A;  5AFM B;  2WZY A;  2W8F A;  4D01 A;  2YN6 A;  4UXU A;  2Y7Y A;  2Y58 A;  5HEG A;  2BYS A;  2X00 D;  4HFH A;  1UX2 A;  2BG9 E;  3EAM A;  3TLT A;  3WTO A;  5AFK A;  4LML A;  3U8M A;  4ZZC A;  2Y56 A;  2ZJV A;  4HFI A;  5KE4 A;  2XQ5 A;  4BQT A;  5AFN A;  3SIO A;  3U8L A;  2XYT A;  4QAB A;  4WV9 A;  3JAF A;  2XQ8 A;  5AFJ A;  4LMJ A;  3WTH A;  3LSV A;  4A98 A;  3JAE A;  5KZU A;  2BJ0 A;  5HEH A;  2BR7 A;  3SH1 A;  5J5I A;  2X00 A;  3UU6 A;  4QAA A;  2UZ6 A;  4TWD A;  5HCJ A;  5BP0 A;  4HFD A;  5JME A;  2Y54 A;  2XQ4 A;  4TWF A;  4EZ1 A;  2PH9 A;  2XNV A;  3UUB A;  3UU8 A;  3UU3 A;  3U8K A;  4Z91 A;  5J5H A;  4B5D A;  3WTI A;  4F8H A;  3ZKR A;  2XQA A;  5HEU A;  2YKS A;  3P50 A;  2YMD A;  3PMZ A;  2XZ6 A;  2BG9 C;  3WTK A;  4ZK1 A;  2BG9 A;  5BW2 A;  2XQ7 A;  3EHZ A;  5L4H A;  4UM3 S;  3TLV A;  4X5T A;  5AFL A;  3WTJ A;  2XYS A;  4QH4 A;  3RHW A;  5L4E A;  2Y57 A;  4XHE A;  4BFQ A;  4DBM A;  2YME A;  5TVC A;  4IL9 A;  3EI0 A;  3IGQ A;  3PEO A;  4HFB A;  2WNJ A;  4ZR6 A;  2XZ5 A;  4LMK A;  3SQ9 A;  4HQP A;  3T4M A;  3WTM A;  5BRX A;  3U8J A;  5AFH A;  2BG9 B;  4AFH A;  5CO5 A;  5HEO A;  4FRR A;  3GUA A;  4ILA A;  3RQW A;  2BYN A;  4NPP A;  4UM3 P;  5IUX A;  3RI5 A;  4TNW A;  2BYQ A;  4QAC A;  4ILC A;  2XQ3 A;  2YOE A;  4ZK4 A;  2XQ9 A;  2BYP A;  4TNV A;  4UY2 A;  5SYO A;  5AIN A;  4NZB A;  4UM3 A;  4ZZB A;  2WNC A;  2W8G A;  4XK9 A;  5J5G A;  1I9B A;  2XQ6 A;  4IRE A;  3UQ7 A;  5J0Z A;  4ALX A;  4ZRU A;  3U8N A;  3WTL A;  5LG3 A;  5HEJ A;  4IL4 A;  4AFT A;  3P4W A;  3UU5 A;  3WIP A;  2XNU A;  2C9T A;  2XNT A;  4ILB A;  4UM1 A;  4Z90 A;  5LXB A;  2VL0 A;  5HCM A;  4PIR A;  3TLS A;  3UQ4 A;  3RQU A;  3TLU A;  3C84 A;  3SQ6 A;  3WTN A;  4ZJT A;  2WN9 A;  3ZDH A;  5AFM A;  5L47 A;  3JAD A;  2ZJU A;  2BYR A;  3ZDG A;  2QC1 B;  4ZJS A;  3RIA A;  1UV6 A;  4COF A;  4HFE A;  5CFB A;  5FJV A;  4QH1 A;  4TWH A;  1UW6 A;  2WNL A; 
#chains in the Genus database with same CATH homology
 4A97 A;  2PGZ A;  4AFG A;  2BR8 A;  4HFC A;  3TLW A;  4QH5 A;  3C79 A;  5J5F A;  3RIF A;  3UU4 A;  5AFM B;  2WZY A;  2W8F A;  4D01 A;  2YN6 A;  4UXU A;  2Y7Y A;  2Y58 A;  5HEG A;  2BYS A;  2X00 D;  4HFH A;  1UX2 A;  2BG9 E;  3EAM A;  3TLT A;  3WTO A;  5AFK A;  4LML A;  3U8M A;  4ZZC A;  2Y56 A;  2ZJV A;  4HFI A;  5KE4 A;  2XQ5 A;  4BQT A;  5AFN A;  3SIO A;  3U8L A;  2XYT A;  4QAB A;  4WV9 A;  3JAF A;  2XQ8 A;  5AFJ A;  4LMJ A;  3WTH A;  3LSV A;  4A98 A;  3JAE A;  5KZU A;  2BJ0 A;  5HEH A;  2BR7 A;  3SH1 A;  5J5I A;  2X00 A;  3UU6 A;  4QAA A;  2UZ6 A;  4TWD A;  5HCJ A;  5BP0 A;  4HFD A;  5JME A;  2Y54 A;  2XQ4 A;  4TWF A;  4EZ1 A;  2PH9 A;  2XNV A;  3UUB A;  3UU8 A;  3UU3 A;  3U8K A;  4Z91 A;  5J5H A;  4B5D A;  3WTI A;  4F8H A;  3ZKR A;  2XQA A;  5HEU A;  2YKS A;  3P50 A;  2YMD A;  3PMZ A;  2XZ6 A;  2BG9 C;  3WTK A;  4ZK1 A;  2BG9 A;  5BW2 A;  2XQ7 A;  3EHZ A;  5L4H A;  4UM3 S;  3TLV A;  4X5T A;  5AFL A;  3WTJ A;  2XYS A;  4QH4 A;  3RHW A;  5L4E A;  2Y57 A;  4XHE A;  4BFQ A;  4DBM A;  2YME A;  5TVC A;  4IL9 A;  3EI0 A;  3IGQ A;  3PEO A;  4HFB A;  2WNJ A;  4ZR6 A;  2XZ5 A;  4LMK A;  3SQ9 A;  4HQP A;  3T4M A;  3WTM A;  5BRX A;  3U8J A;  5AFH A;  2BG9 B;  4AFH A;  5CO5 A;  5HEO A;  4FRR A;  3GUA A;  4ILA A;  3RQW A;  2BYN A;  4NPP A;  4UM3 P;  5IUX A;  3RI5 A;  4TNW A;  2BYQ A;  4QAC A;  4ILC A;  2XQ3 A;  2YOE A;  4ZK4 A;  2XQ9 A;  2BYP A;  4TNV A;  4UY2 A;  5SYO A;  5AIN A;  4NZB A;  4UM3 A;  4ZZB A;  2WNC A;  2W8G A;  4XK9 A;  5J5G A;  1I9B A;  2XQ6 A;  4IRE A;  3UQ7 A;  5J0Z A;  4ALX A;  4ZRU A;  3U8N A;  3WTL A;  5LG3 A;  5HEJ A;  4IL4 A;  4AFT A;  3P4W A;  3UU5 A;  3WIP A;  2XNU A;  2C9T A;  2XNT A;  4ILB A;  4UM1 A;  4Z90 A;  5LXB A;  2VL0 A;  5HCM A;  4PIR A;  3TLS A;  3UQ4 A;  3RQU A;  3TLU A;  3C84 A;  3SQ6 A;  3WTN A;  4ZJT A;  2WN9 A;  3ZDH A;  5AFM A;  5L47 A;  3JAD A;  2ZJU A;  2BYR A;  3ZDG A;  2QC1 B;  4ZJS A;  3RIA A;  1UV6 A;  4COF A;  4HFE A;  5CFB A;  5FJV A;  4QH1 A;  4TWH A;  1UW6 A;  2WNL A; 
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similar chains in the Genus database (?% sequence similarity)
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